pycom01g18720

Belongs to the iron ascorbate-dependent oxidoreductase family

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr1
Physical Location & Seq
Forward (+)
17577574 .. 17581855
4282 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom01g18720.1

Sequence Viewer

Length: 1323 bp
ATGGACGACGAAAAAAGTTCAAGCTCATTTTCAAAGGGGAAGAGTGCACAAGAGAGAGGCTTGCCATATGTGCTTGGGTGCTATGTGATTCCAACATCACATCGTCCAACTTTGACCCCAGATGTTGCCACTGTTCCGACCATTGATTTTGGAAGACTGAAACAAGGCCCTGATGAACGAGAACTTGTTATTGAAGAAATTAGAAATGTTTGTCGTCAGTTAGGGTTCTTCCAAGTCGTGAACCATGGCATCTGTCAAACTGTGTTGGATGAGGCTCTTCGGTCGGCATCGGCGTTTTTCAATTTGCCGGGTTCAGAGAAGGCAAAGTTCATGTCTAATGATGTTCACAACCCAGTGAGGTACGGGACGAGCTTGAAGGATGGACTTGATAAGATTCAGTTTTGGAGGGCTTTTCTCAAACATTATGCTCACCCGTTGGCAGATTGGATCAATTACTGGCCTAACAATCCTTCTAATTACAGGGAAACAATGGGCAAGTATAGCTCAGAAGTGAAGAAACTGAGCATGGAGATAACAGAAGCAATCACTGAGAGTCTAGGGATAGGTCCAAACTACATAAGCAAGAAAATGGAAGATGGAATGCAAGTCATTACAGTCAACTGCTACCCACCGTGCCCTAATCCTGAAATTGCACTAGGGTTGCCACCCCATTCAGATTACAGCTGCTTAACCATTGTTCTTCAGAGCTGCCCAGGGCTTGAAATCATGCACACCGGAGACATCCATGTGGGTGACCATTTTGAAGTACTAAGCAATGGATTGTACAAGAGTGTTGTGCACCGGGCCACGTTGAACCGTGACAGGACAAGAATCTCCATTGCTAGCCTGCATAGTTTGGGATTGGAGAAGAAGATGGGCACTGCCAAAGAGCTTGTGAGTGAAGAGAATCCTGGGAGGTACAGCGAAAGCAGCTTCAAAGATTTTCTGAATTTTCTTGCCAACAATGATCTAGCAGAAGGGAAGAGCTTCATTAACACACTCAAAGTTGATGAAAACAATAATTATCTTAAGCTAGCTAGTGCTCTTTTTTTGTCTGTTAATTACCGGATGAGTACTTCATGCACTCAACTTCGTCGTGAGCCGGCCGGGAAGGGGCCGTCAGGGCTGCGAGTGTCGGTGTCATTTGATCAAGGCGGAGATCAGTTGCCCATACACGATCCTGTAGCTGAGTTGGCCAAGAAGGAGAGGCCTCGCGTTAAGTTTTCGGAGAATGCATGCATGTCAATATCCCCTTTGTGCTTCTTCTATGTGGCCGTTTTGTTATTTGGTTTTTCTCTAATCCAGGTAATTAATTACAAATAA

Protein Analysis

441

Amino Acids

49.17

Weight (kDa)

6.86

Isoelectric Point (pI)

40.05

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DIOX_N PF14226 45 - 156 2.4e-24 non-haem dioxygenase in morphine synthesis N-terminal
2OG-FeII_Oxy PF03171 204 - 283 8.4e-18 2OG-Fe(II) oxygenase superfamily
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0011862)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 1 cut(s) 1215
AciI CCGC 1 cut(s) 1155
AclWI GGATC 2 cut(s) 455, 1172
AcoI YGGCCR 3 cut(s) 1104, 1194, 1272
AcsI RAATTY 1 cut(s) 949
AcuI CTGAAG 1 cut(s) 686
AfaI GTAC 5 cut(s) 362, 768, 785, 920, 1075
AfiI CCNNNNNNNGG 1 cut(s) 1113
AflII CTTAAG 1 cut(s) 1028
AgsI TTSAA 9 cut(s) 21, 33, 194, 301, 376, 722, 764, 814, 937
AjnI CCWGG 3 cut(s) 712, 910, 1302
Alw21I GWGCWC 3 cut(s) 49, 801, 1045
Alw26I GTCTC 1 cut(s) 732
Alw44I GTGCAC 2 cut(s) 45, 797
AlwI GGATC 2 cut(s) 455, 1172
AoxI GGCC 8 cut(s) 166, 458, 804, 1104, 1115, 1194, 1208, 1272
ApaLI GTGCAC 2 cut(s) 45, 797
ApeKI GCWGC 4 cut(s) 684, 708, 930, 1126
ApoI RAATTY 1 cut(s) 949
ArsI GACNNNNNNTTYG 2 cut(s) 317, 349
AseI ATTAAT 1 cut(s) 1311
Asp700I GAANNNNTTC 1 cut(s) 986
AspS9I GGNCC 4 cut(s) 167, 566, 804, 1115
AsuC2I CCSGG 3 cut(s) 309, 803, 1108
AsuHPI GGTGA 2 cut(s) 422, 764
AsuNHI GCTAGC 2 cut(s) 842, 1033
AvaII GGWCC 1 cut(s) 566
BaeGI GKGCMC 4 cut(s) 49, 638, 801, 881
BalI TGGCCA 1 cut(s) 1196
BbsI GAAGAC 1 cut(s) 160
Bbv12I GWGCWC 3 cut(s) 49, 801, 1045
BbvI GCAGC 4 cut(s) 671, 695, 942, 1113
BccI CCATC 3 cut(s) 374, 590, 868
BceAI ACGGC 2 cut(s) 1102, 1259
BciT130I CCWGG 3 cut(s) 714, 912, 1304
BclI TGATCA 1 cut(s) 1147
BcnI CCSGG 3 cut(s) 309, 803, 1108
BcoDI GTCTC 1 cut(s) 732
BfaI CTAG 6 cut(s) 557, 656, 843, 971, 1034, 1038
BfmI CTRYAG 1 cut(s) 1182
BfrI CTTAAG 1 cut(s) 1028
BglI GCCNNNNNGGC 1 cut(s) 1123
BisI GCNGC 4 cut(s) 685, 709, 931, 1127
BlsI GCNGC 4 cut(s) 686, 710, 932, 1128
BmcAI AGTACT 2 cut(s) 768, 1075
Bme1390I CCNGG 6 cut(s) 309, 714, 803, 912, 1108, 1304
Bme18I GGWCC 1 cut(s) 566
BmgT120I GGNCC 4 cut(s) 167, 566, 804, 1115
BmiI GGNNCC 1 cut(s) 1116
BmrFI CCNGG 6 cut(s) 309, 714, 803, 912, 1108, 1304
BmrI ACTGGG 1 cut(s) 347
BmsI GCATC 2 cut(s) 258, 296
BmtI GCTAGC 2 cut(s) 846, 1037
BmuI ACTGGG 1 cut(s) 347
BpiI GAAGAC 1 cut(s) 160
BpuMI CCSGG 3 cut(s) 309, 803, 1108
BsaJI CCNNGG 4 cut(s) 244, 712, 713, 911
BsaWI WCCGGW 2 cut(s) 734, 1065
Bsc4I CCNNNNNNNGG 1 cut(s) 1113
Bse118I RCCGGY 1 cut(s) 1102
Bse1I ACTGG 2 cut(s) 353, 461
Bse3DI GCAATG 2 cut(s) 781, 837
BseBI CCWGG 3 cut(s) 714, 912, 1304
BseDI CCNNGG 4 cut(s) 244, 712, 713, 911
BseGI GGATG 4 cut(s) 274, 385, 741, 1074
BseLI CCNNNNNNNGG 1 cut(s) 1113
BseMI GCAATG 2 cut(s) 781, 837
BseMII CTCAG 4 cut(s) 512, 519, 540, 1179
BseNI ACTGG 2 cut(s) 353, 461
BseSI GKGCMC 4 cut(s) 49, 638, 801, 881
BseX3I CGGCCG 1 cut(s) 1104
BseXI GCAGC 4 cut(s) 671, 695, 942, 1113
Bsh1236I CGCG 1 cut(s) 1215
Bsh1285I CGRYCG 2 cut(s) 284, 1107
BshFI GGCC 8 cut(s) 168, 460, 806, 1106, 1117, 1196, 1210, 1274
BsiEI CGRYCG 2 cut(s) 284, 1107
BsiHKAI GWGCWC 3 cut(s) 49, 801, 1045
BsiSI CCGG 6 cut(s) 308, 735, 802, 1066, 1103, 1107
BslFI GGGAC 1 cut(s) 379
BslI CCNNNNNNNGG 1 cut(s) 1113
BsmAI GTCTC 1 cut(s) 732
BsmFI GGGAC 1 cut(s) 379
BsmI GAATGC 2 cut(s) 606, 1237
BsnI GGCC 8 cut(s) 168, 460, 806, 1106, 1117, 1196, 1210, 1274
Bsp1286I GDGCHC 5 cut(s) 49, 638, 801, 881, 1045
Bsp1407I TGTACA 1 cut(s) 783
Bsp143I GATC 5 cut(s) 447, 967, 1147, 1159, 1177
Bsp19I CCATGG 1 cut(s) 244
BspACI CCGC 1 cut(s) 1155
BspANI GGCC 8 cut(s) 168, 460, 806, 1106, 1117, 1196, 1210, 1274
BspCNI CTCAG 4 cut(s) 513, 518, 541, 1180
BspFNI CGCG 1 cut(s) 1215
BspLI GGNNCC 1 cut(s) 1116
BspOI GCTAGC 2 cut(s) 846, 1037
BspPI GGATC 2 cut(s) 455, 1172
BspQI GCTCTTC 2 cut(s) 282, 977
BspTI CTTAAG 1 cut(s) 1028
BsrDI GCAATG 2 cut(s) 781, 837
BsrFI RCCGGY 1 cut(s) 1102
BsrGI TGTACA 1 cut(s) 783
BsrI ACTGG 2 cut(s) 353, 461
BssAI RCCGGY 1 cut(s) 1102
BssECI CCNNGG 4 cut(s) 244, 712, 713, 911
BssMI GATC 5 cut(s) 447, 967, 1147, 1159, 1177
BssT1I CCWWGG 1 cut(s) 244
Bst2UI CCWGG 3 cut(s) 714, 912, 1304
Bst4CI ACNGT 5 cut(s) 133, 262, 616, 633, 818
Bst6I CTCTTC 4 cut(s) 35, 282, 897, 977
BstAFI CTTAAG 1 cut(s) 1028
BstAUI TGTACA 1 cut(s) 783
BstC8I GCNNGC 6 cut(s) 62, 844, 848, 1035, 1104, 1237
BstDEI CTNAG 5 cut(s) 505, 521, 549, 770, 1188
BstDSI CCRYGG 1 cut(s) 244
BstEII GGTNACC 1 cut(s) 752
BstF5I GGATG 4 cut(s) 274, 385, 741, 1074
BstFNI CGCG 1 cut(s) 1215
BstKTI GATC 5 cut(s) 450, 970, 1150, 1162, 1180
BstMAI GTCTC 1 cut(s) 732
BstMBI GATC 5 cut(s) 447, 967, 1147, 1159, 1177
BstMCI CGRYCG 2 cut(s) 284, 1107
BstMWI GCNNNNNNNGC 5 cut(s) 70, 501, 930, 1123, 1193
BstNI CCWGG 3 cut(s) 714, 912, 1304
BstNSI RCATGY 2 cut(s) 1239, 1243
BstPI GGTNACC 1 cut(s) 752
BstSCI CCNGG 6 cut(s) 307, 712, 801, 910, 1106, 1302
BstSFI CTRYAG 1 cut(s) 1182
BstSLI GKGCMC 4 cut(s) 49, 638, 801, 881
BstUI CGCG 1 cut(s) 1215
BstV1I GCAGC 4 cut(s) 671, 695, 942, 1113
BstV2I GAAGAC 1 cut(s) 160
BstZI CGGCCG 1 cut(s) 1104
BsuRI GGCC 8 cut(s) 168, 460, 806, 1106, 1117, 1196, 1210, 1274
BtgI CCRYGG 1 cut(s) 244
BtsCI GGATG 4 cut(s) 274, 385, 741, 1074
BtsI GCAGTG 1 cut(s) 879
BtsIMutI CAGTG 4 cut(s) 129, 360, 546, 879
Cac8I GCNNGC 6 cut(s) 62, 844, 848, 1035, 1104, 1237
Cfr10I RCCGGY 1 cut(s) 1102
Cfr13I GGNCC 4 cut(s) 167, 566, 804, 1115
Csp6I GTAC 5 cut(s) 361, 767, 784, 919, 1074
CviAII CATG 8 cut(s) 245, 331, 526, 727, 746, 1080, 1236, 1240
CviQI GTAC 5 cut(s) 361, 767, 784, 919, 1074
DdeI CTNAG 5 cut(s) 505, 521, 549, 770, 1188
DpnI GATC 5 cut(s) 449, 969, 1149, 1161, 1179
DpnII GATC 5 cut(s) 447, 967, 1147, 1159, 1177
EaeI YGGCCR 3 cut(s) 1104, 1194, 1272
EagI CGGCCG 1 cut(s) 1104
Eam1104I CTCTTC 4 cut(s) 35, 282, 897, 977
EarI CTCTTC 4 cut(s) 35, 282, 897, 977
EciI GGCGGA 1 cut(s) 1170
EclXI CGGCCG 1 cut(s) 1104
Eco130I CCWWGG 1 cut(s) 244
Eco147I AGGCCT 1 cut(s) 1210
Eco47I GGWCC 1 cut(s) 566
Eco52I CGGCCG 1 cut(s) 1104
Eco57I CTGAAG 1 cut(s) 686
Eco91I GGTNACC 1 cut(s) 752
EcoO109I RGGNCCY 1 cut(s) 167
EcoO65I GGTNACC 1 cut(s) 752
EcoRII CCWGG 3 cut(s) 712, 910, 1302
EcoT14I CCWWGG 1 cut(s) 244
EcoT22I ATGCAT 2 cut(s) 1237, 1241
ErhI CCWWGG 1 cut(s) 244
FaeI CATG 8 cut(s) 248, 334, 529, 730, 749, 1083, 1239, 1243
FaqI GGGAC 1 cut(s) 379
FatI CATG 8 cut(s) 244, 330, 525, 726, 745, 1079, 1235, 1239
FauNDI CATATG 1 cut(s) 67
FbaI TGATCA 1 cut(s) 1147
Fnu4HI GCNGC 4 cut(s) 685, 709, 931, 1127
FokI GGATG 4 cut(s) 281, 392, 728, 1081
Fsp4HI GCNGC 4 cut(s) 685, 709, 931, 1127
FspBI CTAG 6 cut(s) 557, 656, 843, 971, 1034, 1038
GluI GCNGC 4 cut(s) 685, 709, 931, 1127
HaeIII GGCC 8 cut(s) 168, 460, 806, 1106, 1117, 1196, 1210, 1274
HapII CCGG 6 cut(s) 308, 735, 802, 1066, 1103, 1107
Hin1II CATG 8 cut(s) 248, 334, 529, 730, 749, 1083, 1239, 1243
HincII GTYRAC 1 cut(s) 619
HindII GTYRAC 1 cut(s) 619
HinfI GANTC 5 cut(s) 88, 394, 553, 831, 907
HpaII CCGG 6 cut(s) 308, 735, 802, 1066, 1103, 1107
HphI GGTGA 2 cut(s) 422, 764
Hpy166II GTNNAC 5 cut(s) 47, 241, 346, 619, 799
Hpy188I TCNGA 7 cut(s) 138, 316, 508, 676, 705, 948, 1228
Hpy188III TCNNGA 3 cut(s) 238, 644, 1097
Hpy8I GTNNAC 5 cut(s) 47, 241, 346, 619, 799
Hpy99I CGWCG 2 cut(s) 11, 1098
HpyAV CCTTC 6 cut(s) 313, 370, 480, 971, 1105, 1195
HpyCH4III ACNGT 5 cut(s) 133, 262, 616, 633, 818
HpyCH4IV ACGT 1 cut(s) 809
HpyCH4V TGCA 9 cut(s) 47, 604, 653, 730, 799, 850, 1083, 1235, 1239
HpyF10VI GCNNNNNNNGC 5 cut(s) 70, 501, 930, 1123, 1193
HpyF3I CTNAG 5 cut(s) 505, 521, 549, 770, 1188
HpySE526I ACGT 1 cut(s) 809
Hsp92II CATG 8 cut(s) 248, 334, 529, 730, 749, 1083, 1239, 1243
KroI GCCGGC 1 cut(s) 1102
KroNI GCCGGC 1 cut(s) 1104
Ksp22I TGATCA 1 cut(s) 1147
Kzo9I GATC 5 cut(s) 447, 967, 1147, 1159, 1177
LguI GCTCTTC 2 cut(s) 282, 977
Lsp1109I GCAGC 4 cut(s) 671, 695, 942, 1113
LweI GCATC 2 cut(s) 258, 296
MaeI CTAG 6 cut(s) 557, 656, 843, 971, 1034, 1038
MaeII ACGT 1 cut(s) 809
MaeIII GTNAC 2 cut(s) 752, 818
MalI GATC 5 cut(s) 449, 969, 1149, 1161, 1179
MboI GATC 5 cut(s) 447, 967, 1147, 1159, 1177
MhlI GDGCHC 5 cut(s) 49, 638, 801, 881, 1045
MlsI TGGCCA 1 cut(s) 1196
MluNI TGGCCA 1 cut(s) 1196
MlyI GAGTC 1 cut(s) 562
MmeI TCCRAC 4 cut(s) 116, 131, 161, 246
MnlI CCTC 7 cut(s) 50, 265, 351, 399, 909, 1200, 1221
Mox20I TGGCCA 1 cut(s) 1196
Mph1103I ATGCAT 2 cut(s) 1237, 1241
MroNI GCCGGC 1 cut(s) 1102
MroXI GAANNNNTTC 1 cut(s) 986
MscI TGGCCA 1 cut(s) 1196
MseI TTAA 6 cut(s) 689, 993, 1029, 1059, 1218, 1311
MslI CAYNNNNRTG 2 cut(s) 746, 750
Msp20I TGGCCA 1 cut(s) 1196
MspA1I CMGCKG 1 cut(s) 684
MspCI CTTAAG 1 cut(s) 1028
MspI CCGG 6 cut(s) 308, 735, 802, 1066, 1103, 1107
MspR9I CCNGG 6 cut(s) 309, 714, 803, 912, 1108, 1304
Mva1269I GAATGC 2 cut(s) 606, 1237
MvaI CCWGG 3 cut(s) 714, 912, 1304
MvnI CGCG 1 cut(s) 1215
MwoI GCNNNNNNNGC 5 cut(s) 70, 501, 930, 1123, 1193
NaeI GCCGGC 1 cut(s) 1104
NciI CCSGG 3 cut(s) 309, 803, 1108
NcoI CCATGG 1 cut(s) 244
NdeI CATATG 1 cut(s) 67
NdeII GATC 5 cut(s) 447, 967, 1147, 1159, 1177
NgoMIV GCCGGC 1 cut(s) 1102
NheI GCTAGC 2 cut(s) 842, 1033
NlaIII CATG 8 cut(s) 248, 334, 529, 730, 749, 1083, 1239, 1243
NlaIV GGNNCC 1 cut(s) 1116
NmuCI GTSAC 2 cut(s) 752, 818
NsiI ATGCAT 2 cut(s) 1237, 1241
NspI RCATGY 2 cut(s) 1239, 1243
PaeI GCATGC 1 cut(s) 1239
PasI CCCWGGG 1 cut(s) 713
PceI AGGCCT 1 cut(s) 1210
PciSI GCTCTTC 2 cut(s) 282, 977
PcsI WCGNNNNNNNCGW 1 cut(s) 290
PctI GAATGC 2 cut(s) 606, 1237
PdiI GCCGGC 1 cut(s) 1104
PdmI GAANNNNTTC 1 cut(s) 986
PfeI GAWTC 4 cut(s) 88, 394, 831, 907
PkrI GCNGC 4 cut(s) 686, 710, 932, 1128
PleI GAGTC 1 cut(s) 561
PpsI GAGTC 1 cut(s) 561
PshBI ATTAAT 1 cut(s) 1311
Psp6I CCWGG 3 cut(s) 712, 910, 1302
PspEI GGTNACC 1 cut(s) 752
PspGI CCWGG 3 cut(s) 712, 910, 1302
PspN4I GGNNCC 1 cut(s) 1116
PspPI GGNCC 4 cut(s) 167, 566, 804, 1115
PvuII CAGCTG 1 cut(s) 684
RsaI GTAC 5 cut(s) 362, 768, 785, 920, 1075
RsaNI GTAC 5 cut(s) 361, 767, 784, 919, 1074
RseI CAYNNNNRTG 2 cut(s) 746, 750
SapI GCTCTTC 2 cut(s) 282, 977
SaqAI TTAA 6 cut(s) 689, 993, 1029, 1059, 1218, 1311
SatI GCNGC 4 cut(s) 685, 709, 931, 1127
Sau3AI GATC 5 cut(s) 447, 967, 1147, 1159, 1177
Sau96I GGNCC 4 cut(s) 167, 566, 804, 1115
ScaI AGTACT 2 cut(s) 768, 1075
SchI GAGTC 1 cut(s) 562
ScrFI CCNGG 6 cut(s) 309, 714, 803, 912, 1108, 1304
SduI GDGCHC 5 cut(s) 49, 638, 801, 881, 1045
SfaNI GCATC 2 cut(s) 258, 296
SfcI CTRYAG 1 cut(s) 1182
SinI GGWCC 1 cut(s) 566
SmiMI CAYNNNNRTG 2 cut(s) 746, 750
SmlI CTYRAG 1 cut(s) 1028
SmoI CTYRAG 1 cut(s) 1028
SphI GCATGC 1 cut(s) 1239
SseBI AGGCCT 1 cut(s) 1210
SsiI CCGC 1 cut(s) 1155
SspMI CTAG 6 cut(s) 557, 656, 843, 971, 1034, 1038
StuI AGGCCT 1 cut(s) 1210
StyD4I CCNGG 6 cut(s) 307, 712, 801, 910, 1106, 1302
StyI CCWWGG 1 cut(s) 244
TaaI ACNGT 5 cut(s) 133, 262, 616, 633, 818
TaiI ACGT 1 cut(s) 812
TaqII GACCGA 1 cut(s) 270
TatI WGTACW 3 cut(s) 766, 783, 1073
TfiI GAWTC 4 cut(s) 88, 394, 831, 907
Tru1I TTAA 6 cut(s) 689, 993, 1029, 1059, 1218, 1311
Tru9I TTAA 6 cut(s) 689, 993, 1029, 1059, 1218, 1311
TscAI CASTG 4 cut(s) 136, 360, 553, 886
TseFI GTSAC 2 cut(s) 752, 818
TseI GCWGC 4 cut(s) 684, 708, 930, 1126
Tsp45I GTSAC 2 cut(s) 752, 818
TspDTI ATGAA 5 cut(s) 189, 319, 979, 1026, 1068
TspRI CASTG 4 cut(s) 136, 360, 553, 886
Vha464I CTTAAG 1 cut(s) 1028
VneI GTGCAC 2 cut(s) 45, 797
VpaK11BI GGWCC 1 cut(s) 566
VspI ATTAAT 1 cut(s) 1311
XapI RAATTY 1 cut(s) 949
XceI RCATGY 2 cut(s) 1239, 1243
XmnI GAANNNNTTC 1 cut(s) 986
XspI CTAG 6 cut(s) 557, 656, 843, 971, 1034, 1038
ZrmI AGTACT 2 cut(s) 768, 1075
Zsp2I ATGCAT 2 cut(s) 1237, 1241
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.