AT5G08310

pentatricopeptide repeat-containing protein At5g08310, mitochondrial

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
5
OG0015139
Physical Location & Seq
Reverse (-)
2671987 .. 2675396
3410 bp
Loading structure...
UTR
Exon/CDS
Intron
AT5G08310.1

Sequence Viewer

Length: 2499 bp
ATGGCCTTCTCGAGAATCGCTCTTCTTTGCCAACGATTCTCTAGACAACAACAACAACGCCAACTTCTTCACAGACCACTCACTACGAAGCTAGATAACACCAGATTCCTCCATCCCAATCAATCCAAGCTTGCCCAAAACCTAATCGTGATCTTCACTAGACAACCTTTTTCACCTGACGACCCTGAGCTACTGATACTCTCTCCAGAGCTCAACACCAAGGTAGTCGAAACCGTCTTGAATGGATTCAAAAGGTGGGGTTTGGCTTATCTGTTCTTCAATTGGGCTTCTAAACAGGAAGGTTACAGAAACGATATGTATGCTTACAATGCCATGGCTTCTATCCTATCACGTGCTCGACAAAATGCCTCACTGAAAGCTTTGGTTGTAGATGTTCTGAATTCTCGTTGTTTCATGTCTCCTGGAGCTTTCGGGTTTTTCATTCGGTGTTTAGGTAATGCTGGGCTAGTGGATGAAGCAAGTTCTGTTTTTGATCGAGTTAGAGAGATGGGTCTTTGTGTTCCTAATGCTTATACTTATAACTGTTTGTTAGAAGCAATTTCTAAGTCGAATTCGAGCTCTGTTGAGTTGGTTGAGGCGAGGTTGAAGGAGATGAGGGATTGCGGTTTTCATTTCGATAAATTTACTCTTACACCAGTTTTGCAGGTTTATTGCAACACTGGTAAGTCTGAGAGAGCGTTGAGTGTTTTCAATGAGATTCTTAGTAGAGGTTGGCTTGATGAACATATTTCAACGATTTTGGTTGTTTCATTTTGTAAGTGGGGTCAGGTGGATAAGGCTTTCGAGTTGATTGAGATGCTTGAAGAACGAGATATTAGGTTGAACTATAAGACATATTGTGTTTTGATACATGGATTCGTAAAGGAGTCACGGATTGATAAAGCTTTTCAGTTGTTTGAGAAAATGCGTCGGATGGGTATGAACGCTGATATTGCATTGTATGATGTGTTGATAGGAGGACTTTGCAAGCATAAAGATCTTGAGATGGCGCTGAGTTTGTATTTGGAGATTAAGAGGTCAGGAATTCCACCTGATAGAGGAATACTTGGGAAGCTATTATGTTCATTTTCCGAAGAAAGTGAATTAAGTCGAATAACAGAAGTGATCATTGGAGACATAGACAAAAAATCTGTGATGCTTCTTTACAAATCTTTGTTTGAGGGGTTTATTAGGAATGATTTGGTGCATGAGGCTTACAGTTTTATTCAGAATCTCATGGGAAATTATGAGTCGGATGGTGTGTCTGAGATTGTTAAGCTTCTTAAGGATCATAATAAAGCAATCCTCCCAGATTCAGATTCTCTTAGCATTGTGATTAATTGCTTAGTCAAAGCTAACAAGGTGGATATGGCAGTGACCTTGTTACATGATATTGTCCAGAATGGCCTTATTCCAGGTCCTATGATGTACAACAACATAATAGAGGGGATGTGTAAAGAAGGAAGGTCGGAAGAAAGCTTGAAACTCTTAGGAGAAATGAAGGATGCCGGAGTTGAACCAAGTCAATTCACGCTTAATTGTATTTATGGTTGCTTGGCTGAACGATGCGATTTTGTAGGAGCATTGGACCTGCTGAAAAAGATGCGTTTTTATGGATTTGAGCCATGGATAAAGCATACTACCTTTCTTGTCAAAAAACTTTGCGAGAATGGAAGGGCTGTTGATGCTTGCAAGTACCTTGATGATGTAGCTGGAGAAGGTTTCCTTGGTCACATGGTTGCCTCTACTGCTGCGATTGATGGCCTCATAAAAAATGAGGGAGTAGATAGAGGTTTAGAGTTATTCCGAGACATATGTGCCAATGGTCACTGCCCTGATGTGATTGCATATCATGTATTGATAAAGGCTCTATGTAAAGCGTGTCGAACTATGGAAGCTGATATCCTATTTAATGAAATGGTATCAAAAGGACTAAAACCTACTGTTGCTACTTATAACAGTATGATAGATGGATGGTGCAAGGAAGGTGAGATTGACCGGGGCCTGTCTTGTATAGTGAGGATGTATGAGGATGAGAAAAACCCTGATGTTATTACTTACACTAGCTTAATACATGGGCTATGCGCTAGCGGAAGACCTAGTGAAGCAATCTTTCGTTGGAATGAAATGAAGGGAAAAGATTGCTATCCAAATAGAATTACTTTTATGGCACTTATTCAGGGTCTTTGCAAGTGTGGCTGGTCTGGTGAGGCCTTAGTTTATTTTCGTGAGATGGAAGAAAAAGAAATGGAGCCTGATTCAGCTGTTTACTTATCACTCGTAAGCTCTTTTCTGTCAAGTGAAAACATCAATGCTGGGTTTGGGATATTCAGAGAAATGGTTCATAAAGGAAGATTTCCGGTTTCAGTAGATAGGAACTATATGCTTGCTGTTAATGTTACAAGTAAGTTTGTGGAAGACTTGAGGACATCATGCTATCTCACATGTCTAATAAAAGACGGCAGAATTCCAATTTTAGCTGTTGTGAGTAGAATATGA

Protein Analysis

832

Amino Acids

94.07

Weight (kDa)

6.27

Isoelectric Point (pI)

35.64

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TPR_24 PF23276 248 - 343 8.9e-09 Fungal tetratrico peptide repeats
PPR_2 PF13041 252 - 295 2.3e-06 PPR repeat family
PPR PF01535 285 - 313 1.3e-06 PPR repeat
PPR_2 PF13041 317 - 352 4.5e-07 PPR repeat family
PPR_1 PF12854 469 - 501 8.5e-06 PPR repeat
PPR_2 PF13041 475 - 519 2.6e-10 PPR repeat family
PPR PF01535 476 - 505 4.6e-06 PPR repeat
PPR_2 PF13041 580 - 626 5.2e-06 PPR repeat family
PPR_2 PF13041 612 - 661 3e-15 PPR repeat family
PPR_1 PF12854 643 - 667 1.8e-08 PPR repeat
PPR_1 PF12854 681 - 710 1.6e-07 PPR repeat
PPR_2 PF13041 682 - 731 1.4e-14 PPR repeat family
PPR PF01535 685 - 715 1e-05 PPR repeat
PPR_1 PF12854 713 - 746 6.6e-07 PPR repeat
PPR_2 PF13041 720 - 764 6.3e-06 PPR repeat family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0015139)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G08310 AT5G08310
fragaria_vesca FvH4_4g11722 FvH4_4g11723
prunus_persica Prupe.7G271800_v2.0.a1
rosa_chinensis RchiOBHm_Chr4g0408911
rosa_laevigata RLG00000008609
rosa_multiflora Rmu_sc0037819.1_g000001 Rmu_ssc0000300.1_g000001
rosa_roxburghii Rroxscaffold_5G00353290
rosa_rugosa Rorug04G0088600
rosa_samantha Rh4AG152300 Rh4BG149800 Rh4CG160700 Rh4DG145800
rosa_wichuraiana Rw4G012550

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 540, 1956
Acc36I ACCTGC 2 cut(s) 655, 1599
AciI CCGC 2 cut(s) 624, 2091
AclWI GGATC 1 cut(s) 1296
AcsI RAATTY 5 cut(s) 400, 571, 641, 1044, 2466
AcvI CACGTG 1 cut(s) 353
AfaI GTAC 2 cut(s) 1430, 1697
AfiI CCNNNNNNNGG 1 cut(s) 1058
AflII CTTAAG 1 cut(s) 1283
AflIII ACRYGT 1 cut(s) 2444
AjnI CCWGG 2 cut(s) 421, 1414
AjuI GAANNNNNNNTTGG 4 cut(s) 1113, 1145, 1710, 1742
Alw21I GWGCWC 3 cut(s) 213, 358, 581
Alw26I GTCTC 3 cut(s) 423, 1128, 1803
AlwI GGATC 1 cut(s) 1296
Ama87I CYCGRG 1 cut(s) 10
AoxI GGCC 5 cut(s) 3, 1405, 1762, 2002, 2211
ApeKI GCWGC 1 cut(s) 1751
ApoI RAATTY 5 cut(s) 400, 571, 641, 1044, 2466
AseI ATTAAT 1 cut(s) 1338
Asp700I GAANNNNTTC 2 cut(s) 245, 2340
AspLEI GCGC 2 cut(s) 1012, 2087
AspS9I GGNCC 3 cut(s) 1418, 1588, 2002
AsuC2I CCSGG 1 cut(s) 2000
AsuHPI GGTGA 3 cut(s) 165, 2000, 2219
AsuNHI GCTAGC 1 cut(s) 2087
AvaI CYCGRG 1 cut(s) 10
AvaII GGWCC 2 cut(s) 1418, 1588
BanII GRGCYC 2 cut(s) 213, 581
BbrPI CACGTG 1 cut(s) 353
BbsI GAAGAC 2 cut(s) 2101, 2424
Bbv12I GWGCWC 3 cut(s) 213, 358, 581
BbvI GCAGC 1 cut(s) 1738
BccI CCATC 9 cut(s) 120, 502, 928, 1000, 1250, 1754, 1964, 1968, 2227
BceAI ACGGC 1 cut(s) 2476
BcgI CGANNNNNNTGC 2 cut(s) 302, 336
BciT130I CCWGG 2 cut(s) 423, 1416
BclI TGATCA 1 cut(s) 1125
BcnI CCSGG 1 cut(s) 2000
BcoDI GTCTC 3 cut(s) 423, 1128, 1803
BfaI CTAG 7 cut(s) 42, 92, 159, 467, 2064, 2088, 2100
BfoI RGCGCY 1 cut(s) 1013
BfrI CTTAAG 1 cut(s) 1283
BfuAI ACCTGC 2 cut(s) 655, 1599
BglII AGATCT 1 cut(s) 997
BisI GCNGC 1 cut(s) 1752
BlsI GCNGC 1 cut(s) 1753
Bme1390I CCNGG 3 cut(s) 423, 1416, 2000
Bme18I GGWCC 2 cut(s) 1418, 1588
BmeT110I CYCGRG 1 cut(s) 10
BmgT120I GGNCC 3 cut(s) 1418, 1588, 2002
BmiI GGNNCC 2 cut(s) 2003, 2253
BmrFI CCNGG 3 cut(s) 423, 1416, 2000
BmsI GCATC 6 cut(s) 807, 1146, 1495, 1556, 1593, 1675
BmtI GCTAGC 1 cut(s) 2091
BpiI GAAGAC 2 cut(s) 2101, 2424
BplI GAGNNNNNCTC 1 cut(s) 36
BpmI CTGGAG 3 cut(s) 189, 444, 1734
Bpu10I CCTNAGC 1 cut(s) 186
BpuEI CTTGAG 2 cut(s) 1022, 2443
BpuMI CCSGG 1 cut(s) 2000
BsaAI YACGTR 1 cut(s) 353
BsaBI GATNNNNATC 1 cut(s) 2145
BsaJI CCNNGG 5 cut(s) 219, 333, 1625, 1726, 1999
BsaWI WCCGGW 1 cut(s) 2359
Bsc4I CCNNNNNNNGG 1 cut(s) 1058
Bse1I ACTGG 2 cut(s) 656, 685
Bse8I GATNNNNATC 1 cut(s) 2145
BseBI CCWGG 2 cut(s) 423, 1416
BseDI CCNNGG 5 cut(s) 219, 333, 1625, 1726, 1999
BseGI GGATG 9 cut(s) 112, 478, 939, 1261, 1455, 1510, 1979, 2028, 2038
BseJI GATNNNNATC 1 cut(s) 2145
BseLI CCNNNNNNNGG 1 cut(s) 1058
BseMII CTCAG 4 cut(s) 177, 681, 1004, 1257
BseNI ACTGG 2 cut(s) 656, 685
BseXI GCAGC 1 cut(s) 1738
BseYI CCCAGC 2 cut(s) 461, 2315
BshFI GGCC 5 cut(s) 5, 1407, 1764, 2004, 2213
BsiHKAI GWGCWC 3 cut(s) 213, 358, 581
BsiHKCI CYCGRG 1 cut(s) 10
BsiSI CCGG 3 cut(s) 1509, 1999, 2360
BslI CCNNNNNNNGG 1 cut(s) 1058
BsmAI GTCTC 3 cut(s) 423, 1128, 1803
BsnI GGCC 5 cut(s) 5, 1407, 1764, 2004, 2213
BsoBI CYCGRG 1 cut(s) 10
Bsp1286I GDGCHC 3 cut(s) 213, 358, 581
Bsp1407I TGTACA 1 cut(s) 1428
Bsp143I GATC 5 cut(s) 150, 493, 997, 1125, 1288
Bsp19I CCATGG 2 cut(s) 333, 1625
BspACI CCGC 2 cut(s) 624, 2091
BspANI GGCC 5 cut(s) 5, 1407, 1764, 2004, 2213
BspCNI CTCAG 4 cut(s) 178, 682, 1005, 1258
BspLI GGNNCC 2 cut(s) 2003, 2253
BspMI ACCTGC 2 cut(s) 655, 1599
BspOI GCTAGC 1 cut(s) 2091
BspPI GGATC 1 cut(s) 1296
BspQI GCTCTTC 1 cut(s) 27
BspTI CTTAAG 1 cut(s) 1283
BsrGI TGTACA 1 cut(s) 1428
BsrI ACTGG 2 cut(s) 656, 685
BssECI CCNNGG 5 cut(s) 219, 333, 1625, 1726, 1999
BssMI GATC 5 cut(s) 150, 493, 997, 1125, 1288
BssT1I CCWWGG 4 cut(s) 219, 333, 1625, 1726
Bst2UI CCWGG 2 cut(s) 423, 1416
Bst4CI ACNGT 5 cut(s) 235, 545, 1220, 1945, 1961
Bst6I CTCTTC 1 cut(s) 27
BstAFI CTTAAG 1 cut(s) 1283
BstAUI TGTACA 1 cut(s) 1428
BstBAI YACGTR 1 cut(s) 353
BstC8I GCNNGC 5 cut(s) 132, 989, 1690, 2089, 2388
BstDSI CCRYGG 2 cut(s) 333, 1625
BstENI CCTNNNNNAGG 1 cut(s) 1056
BstF5I GGATG 9 cut(s) 112, 478, 939, 1261, 1455, 1510, 1979, 2028, 2038
BstH2I RGCGCY 1 cut(s) 1013
BstHHI GCGC 2 cut(s) 1012, 2087
BstKTI GATC 5 cut(s) 153, 496, 1000, 1128, 1291
BstMAI GTCTC 3 cut(s) 423, 1128, 1803
BstMBI GATC 5 cut(s) 150, 493, 997, 1125, 1288
BstMWI GCNNNNNNNGC 5 cut(s) 329, 953, 1685, 1748, 2196
BstNI CCWGG 2 cut(s) 423, 1416
BstNSI RCATGY 1 cut(s) 2448
BstSCI CCNGG 3 cut(s) 421, 1414, 1998
BstV1I GCAGC 1 cut(s) 1738
BstV2I GAAGAC 2 cut(s) 2101, 2424
BstX2I RGATCY 1 cut(s) 997
BstYI RGATCY 1 cut(s) 997
BsuRI GGCC 5 cut(s) 5, 1407, 1764, 2004, 2213
BtgI CCRYGG 2 cut(s) 333, 1625
BtsCI GGATG 9 cut(s) 112, 478, 939, 1261, 1455, 1510, 1979, 2028, 2038
BtsI GCAGTG 2 cut(s) 1380, 1828
BtsIMutI CAGTG 4 cut(s) 371, 678, 1380, 1828
BveI ACCTGC 2 cut(s) 655, 1599
Cac8I GCNNGC 5 cut(s) 132, 989, 1690, 2089, 2388
CfoI GCGC 2 cut(s) 1012, 2087
Cfr13I GGNCC 3 cut(s) 1418, 1588, 2002
CseI GACGC 1 cut(s) 917
Csp6I GTAC 2 cut(s) 1429, 1696
CviQI GTAC 2 cut(s) 1429, 1696
DpnI GATC 5 cut(s) 152, 495, 999, 1127, 1290
DpnII GATC 5 cut(s) 150, 493, 997, 1125, 1288
Eam1104I CTCTTC 1 cut(s) 27
EarI CTCTTC 1 cut(s) 27
Ecl136II GAGCTC 2 cut(s) 211, 579
Eco130I CCWWGG 4 cut(s) 219, 333, 1625, 1726
Eco147I AGGCCT 1 cut(s) 2213
Eco24I GRGCYC 2 cut(s) 213, 581
Eco32I GATATC 1 cut(s) 1903
Eco47I GGWCC 2 cut(s) 1418, 1588
Eco53kI GAGCTC 2 cut(s) 211, 579
Eco72I CACGTG 1 cut(s) 353
Eco88I CYCGRG 1 cut(s) 10
EcoICRI GAGCTC 2 cut(s) 211, 579
EcoNI CCTNNNNNAGG 1 cut(s) 1056
EcoO109I RGGNCCY 2 cut(s) 1418, 2002
EcoRI GAATTC 4 cut(s) 400, 571, 1044, 2466
EcoRII CCWGG 2 cut(s) 421, 1414
EcoRV GATATC 1 cut(s) 1903
EcoT14I CCWWGG 4 cut(s) 219, 333, 1625, 1726
EcoT38I GRGCYC 2 cut(s) 213, 581
ErhI CCWWGG 4 cut(s) 219, 333, 1625, 1726
FalI AAGNNNNNCTT 2 cut(s) 1710, 1742
FauNDI CATATG 1 cut(s) 1814
FbaI TGATCA 1 cut(s) 1125
Fnu4HI GCNGC 1 cut(s) 1752
FokI GGATG 9 cut(s) 99, 485, 946, 1268, 1462, 1517, 1986, 2035, 2045
FriOI GRGCYC 2 cut(s) 213, 581
Fsp4HI GCNGC 1 cut(s) 1752
FspBI CTAG 7 cut(s) 42, 92, 159, 467, 2064, 2088, 2100
GlaI GCGC 2 cut(s) 1011, 2086
GluI GCNGC 1 cut(s) 1752
GsaI CCCAGC 2 cut(s) 465, 2319
GsuI CTGGAG 3 cut(s) 189, 444, 1734
HaeII RGCGCY 1 cut(s) 1013
HaeIII GGCC 5 cut(s) 5, 1407, 1764, 2004, 2213
HapII CCGG 3 cut(s) 1509, 1999, 2360
HgaI GACGC 1 cut(s) 917
HhaI GCGC 2 cut(s) 1012, 2087
Hin6I GCGC 2 cut(s) 1010, 2085
HinP1I GCGC 2 cut(s) 1010, 2085
HindIII AAGCTT 5 cut(s) 128, 378, 903, 1277, 1477
HpaII CCGG 3 cut(s) 1509, 1999, 2360
HphI GGTGA 3 cut(s) 165, 2000, 2219
Hpy166II GTNNAC 1 cut(s) 2269
Hpy8I GTNNAC 1 cut(s) 2269
Hpy99I CGWCG 1 cut(s) 933
HpyCH4III ACNGT 5 cut(s) 235, 545, 1220, 1945, 1961
HpyCH4IV ACGT 1 cut(s) 352
HpyCH4V TGCA 9 cut(s) 664, 675, 956, 987, 1207, 1692, 1847, 1980, 2190
HpyF10VI GCNNNNNNNGC 5 cut(s) 329, 953, 1685, 1748, 2196
HpySE526I ACGT 1 cut(s) 352
HspAI GCGC 2 cut(s) 1010, 2085
Ksp22I TGATCA 1 cut(s) 1125
Kzo9I GATC 5 cut(s) 150, 493, 997, 1125, 1288
LguI GCTCTTC 1 cut(s) 27
LmnI GCTCC 3 cut(s) 425, 1580, 2251
Lsp1109I GCAGC 1 cut(s) 1738
LweI GCATC 6 cut(s) 807, 1146, 1495, 1556, 1593, 1675
MaeI CTAG 7 cut(s) 42, 92, 159, 467, 2064, 2088, 2100
MaeII ACGT 1 cut(s) 352
MaeIII GTNAC 7 cut(s) 302, 888, 1375, 1383, 1730, 1826, 2398
MalI GATC 5 cut(s) 152, 495, 999, 1127, 1290
MboI GATC 5 cut(s) 150, 493, 997, 1125, 1288
MfeI CAATTG 1 cut(s) 280
MflI RGATCY 1 cut(s) 997
MhlI GDGCHC 3 cut(s) 213, 358, 581
MlyI GAGTC 2 cut(s) 896, 1259
MmeI TCCRAC 4 cut(s) 911, 1233, 1449, 2099
MroXI GAANNNNTTC 2 cut(s) 245, 2340
MseI TTAA 9 cut(s) 1032, 1106, 1275, 1284, 1338, 1536, 1911, 2069, 2394
MspA1I CMGCKG 1 cut(s) 2264
MspCI CTTAAG 1 cut(s) 1283
MspI CCGG 3 cut(s) 1509, 1999, 2360
MspR9I CCNGG 3 cut(s) 423, 1416, 2000
MunI CAATTG 1 cut(s) 280
MvaI CCWGG 2 cut(s) 423, 1416
MwoI GCNNNNNNNGC 5 cut(s) 329, 953, 1685, 1748, 2196
NciI CCSGG 1 cut(s) 2000
NcoI CCATGG 2 cut(s) 333, 1625
NdeI CATATG 1 cut(s) 1814
NdeII GATC 5 cut(s) 150, 493, 997, 1125, 1288
NheI GCTAGC 1 cut(s) 2087
NlaIV GGNNCC 2 cut(s) 2003, 2253
NmuCI GTSAC 4 cut(s) 888, 1375, 1730, 1826
NspI RCATGY 1 cut(s) 2448
PaeR7I CTCGAG 1 cut(s) 10
PceI AGGCCT 1 cut(s) 2213
PciI ACATGT 1 cut(s) 2444
PciSI GCTCTTC 1 cut(s) 27
PdmI GAANNNNTTC 2 cut(s) 245, 2340
PfoI TCCNGGA 1 cut(s) 421
PkrI GCNGC 1 cut(s) 1753
PleI GAGTC 2 cut(s) 895, 1258
PmaCI CACGTG 1 cut(s) 353
PmlI CACGTG 1 cut(s) 353
PpsI GAGTC 2 cut(s) 895, 1258
Ppu21I YACGTR 1 cut(s) 353
PpuMI RGGWCCY 1 cut(s) 1418
PscI ACATGT 1 cut(s) 2444
PshBI ATTAAT 1 cut(s) 1338
PsiI TTATAA 2 cut(s) 540, 1956
Psp124BI GAGCTC 2 cut(s) 213, 581
Psp5II RGGWCCY 1 cut(s) 1418
Psp6I CCWGG 2 cut(s) 421, 1414
PspCI CACGTG 1 cut(s) 353
PspFI CCCAGC 2 cut(s) 461, 2315
PspGI CCWGG 2 cut(s) 421, 1414
PspN4I GGNNCC 2 cut(s) 2003, 2253
PspPI GGNCC 3 cut(s) 1418, 1588, 2002
PspPPI RGGWCCY 1 cut(s) 1418
PsuI RGATCY 1 cut(s) 997
PvuII CAGCTG 1 cut(s) 2264
RsaI GTAC 2 cut(s) 1430, 1697
RsaNI GTAC 2 cut(s) 1429, 1696
SacI GAGCTC 2 cut(s) 213, 581
SapI GCTCTTC 1 cut(s) 27
SaqAI TTAA 9 cut(s) 1032, 1106, 1275, 1284, 1338, 1536, 1911, 2069, 2394
SatI GCNGC 1 cut(s) 1752
Sau3AI GATC 5 cut(s) 150, 493, 997, 1125, 1288
Sau96I GGNCC 3 cut(s) 1418, 1588, 2002
SchI GAGTC 2 cut(s) 896, 1259
ScrFI CCNGG 3 cut(s) 423, 1416, 2000
SduI GDGCHC 3 cut(s) 213, 358, 581
SfaNI GCATC 6 cut(s) 807, 1146, 1495, 1556, 1593, 1675
Sfr274I CTCGAG 1 cut(s) 10
SinI GGWCC 2 cut(s) 1418, 1588
SlaI CTCGAG 1 cut(s) 10
SmlI CTYRAG 4 cut(s) 10, 1001, 1283, 2422
SmoI CTYRAG 4 cut(s) 10, 1001, 1283, 2422
SseBI AGGCCT 1 cut(s) 2213
SsiI CCGC 2 cut(s) 624, 2091
SspMI CTAG 7 cut(s) 42, 92, 159, 467, 2064, 2088, 2100
SstI GAGCTC 2 cut(s) 213, 581
StuI AGGCCT 1 cut(s) 2213
StyD4I CCNGG 3 cut(s) 421, 1414, 1998
StyI CCWWGG 4 cut(s) 219, 333, 1625, 1726
TaaI ACNGT 5 cut(s) 235, 545, 1220, 1945, 1961
TaiI ACGT 1 cut(s) 355
TatI WGTACW 1 cut(s) 1428
Tru1I TTAA 9 cut(s) 1032, 1106, 1275, 1284, 1338, 1536, 1911, 2069, 2394
Tru9I TTAA 9 cut(s) 1032, 1106, 1275, 1284, 1338, 1536, 1911, 2069, 2394
TscAI CASTG 4 cut(s) 378, 685, 1380, 1835
TseFI GTSAC 4 cut(s) 888, 1375, 1730, 1826
TseI GCWGC 1 cut(s) 1751
Tsp45I GTSAC 4 cut(s) 888, 1375, 1730, 1826
TspGWI ACGGA 1 cut(s) 907
TspRI CASTG 4 cut(s) 378, 685, 1380, 1835
Vha464I CTTAAG 1 cut(s) 1283
VpaK11BI GGWCC 2 cut(s) 1418, 1588
VspI ATTAAT 1 cut(s) 1338
XagI CCTNNNNNAGG 1 cut(s) 1056
XapI RAATTY 5 cut(s) 400, 571, 641, 1044, 2466
XbaI TCTAGA 1 cut(s) 41
XceI RCATGY 1 cut(s) 2448
XhoI CTCGAG 1 cut(s) 10
XmnI GAANNNNTTC 2 cut(s) 245, 2340
XspI CTAG 7 cut(s) 42, 92, 159, 467, 2064, 2088, 2100
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.