Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb4

Orthogroup ID

OG0015139

Physical Location & Seq

Genomic Coordinates Forward (+)

15464513 .. 15467404

Gene Structure 2892 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_4g11722.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2064 bp

ATGTGTCCTCAATGGCCTCAAGAGCTGGAAAGTAGCACACTTGTTCTTCACATGGGCATCCAACCAATCTGGGTACACCCACAATTGCTACACTTACAATGCCATGGCTTCACACCTATCACGTGCTCGACAAAATGCCCCAATGAAGGCCTTGGCCATGGAGCTTGTGGGTTCCAATTGTTATATGACCCCTGGCGCTCTGGGTTCTTTCTAAGATGCTTGGGGAGTGTGGCGTTGGTTGAAGAAGCCAACATTTTGTTTGATGAGATTTGTAAAAAGGGTCTTTGTGTTCCTAATGGATATAGCTATAACTGTTTGTTGGAGGCTGTGTCTAAGTCAGGTTCGATTGAATTGGTAGAGAAGAGAATGAAGGAAATGAGGGATGCTGGTTGGGATTTCGATAGGTACACGTTGACTGCGGCGTTAAAGGTTTATTGCAATGCAGGGAAGTTCGAAAAGGCTATGGAGGTTTATGATGAAATGCATGAGAAGGGCTGGGTTGATGCTCATGCTATGTGCATTTTGGTGTTGTATTTGTGCAAGTGGGGTGAGGTTGACAAGGCTTTTGATTTGATTGAAAGAATGGAGCATCAGAATCTTGGGTTGAATGAGAAGACATTTCGTGTTTTGATTCATGGGTTTGTGAAGGAGTCCAGAGTGGATAAGGCTCTTCATTTGTTTGATAAGATGCAGAAGACAGGTTTCTCTGTTGATGTTTCTCTTTATGATGTACTGATTGGAGGGCTCTGTGAGAATAGAGAGATTGAGAAAGCCTTGTCTATGTATTCGGAAATGAAGGATTTGGGAATCCAGTCTGATGTTAGAATCCTTAGGAAGCTCATATTAGCTTTTTCGGATGAAAGGGAAATGATACGGATGCTTGAGGAAAGTCGGGAAGATTTGAATGAAGAGGGTATGCTTATGCTTTGCAGTTCTGTGCTGAATGGTCTGGTTGATAACGGCTCCGTTGACAGAGCTTATCAACTGCTTCAGGCAATGATGAAAAACGAATCTGATGTTGATCCAGCAGTAAAGAAAAAGGTTCGTCCTACCACTCTTTCTTTTGAAACTGTTATTGATGGCCTTCTAAAATTTGGTAAGTTGCCTATGGCGTTAAGCCTGTTGGAAGACGTGAATCGGATAGGGTGTAAAGCAAATGTTAGAATCTACAATAATGTAATTCATGAACTGTGCAAATCAAATAAATTGGAGGAAAGTTTTAAACTTCTGAGAGAGATGGAGCAATCTGGAATTGAACCCACACATTTTACCCATAACTCAATATTTGGTTGCCTCTGTAGAAGAGAGGATGTTCAAGGAAGCCTTAACCTTTTGAAGGAGATGCGTGTTTGTGGACATCAGCCATGGGAAAAACATTCCAGCTTGCTCGTGAAGCAGTTGTGCCAACACGGGAAGGCAGCTGAAGCTTGTCATTTTCTTGATAAAATGGTTGAAGTGAATTTTCTCCCTGGTCTAGTTTCCTATTCTACGGTTATTCATGGATTGCTCAAAAATCAAGAAGTAGATCAAGCTTTACGGCTATTTCAGGACATCTGTGCTGATGGTTATTGTCCTGATGCGGTTTTCTATAACATATTGATAAATGGGCTATGTAAGGCCAAAAGAGTTTCGGAAGCAGAAAACTTTCTGATTGAGATGGTGATGAAGGGTCTTGTTCCCTCAGTTGTAACCTGCAATCTGCTGATAAATGGGTATTGTAAAAATGGTGATGTAGATAAAGCCATGACTTGCCTCTCCAGGATCTTTGGTGAACATAGAGAACCTAACGTGATTACATACACAACAGTAATAGATGGATTATGCAAGGCTGGAAGGATTGATGATGCTCTTGTGCTTTGGAACGACATGGCAAAGAAAGGATGTGCTCCAAACAGAATTACTTTTATGGCTCTTATCAATGGTCTCTGCGAGTGTGGTAAGCCTGTTGAGGCTTTAGCTTATCTTCATGAGATGGAAGAGAAGGAAATGAAACCCGAGATACCTGTATATTCAGCAGTAATAAGTGCTTTAGTCTCTAACCAAAACCTTCCTCCTGCCACTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_1 PPR_2 PPR_3

Protein Analysis

688

Amino Acids

77.49

Weight (kDa)

5.69

Isoelectric Point (pI)

36.03

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	98 - 147	6e-06	PPR repeat family
TPR_24	PF23276	107 - 229	7.2e-08	Fungal tetratrico peptide repeats
PPR	PF01535	137 - 165	4.6e-06	PPR repeat
PPR_long	PF17177	153 - 300	1.6e-07	Pentacotripeptide-repeat region of PRORP
PPR_2	PF13041	171 - 216	2.2e-07	PPR repeat family
TPR_24	PF23276	179 - 264	2.2e-07	Fungal tetratrico peptide repeats
PPR_2	PF13041	238 - 274	1.6e-07	PPR repeat family
PPR_3	PF13812	373 - 431	8.8e-08	Pentatricopeptide repeat domain
PPR_long	PF17177	375 - 485	3.5e-06	Pentacotripeptide-repeat region of PRORP
PPR_1	PF12854	382 - 414	1.2e-08	PPR repeat
PPR_2	PF13041	386 - 434	4.6e-14	PPR repeat family
PPR_1	PF12854	521 - 554	1.6e-11	PPR repeat
PPR_2	PF13041	525 - 574	2.7e-15	PPR repeat family
PPR	PF01535	528 - 558	8.9e-07	PPR repeat
PPR_3	PF13812	551 - 604	2.3e-07	Pentatricopeptide repeat domain
PPR_1	PF12854	556 - 582	5.6e-09	PPR repeat
PPR_2	PF13041	560 - 609	2.6e-15	PPR repeat family
PPR	PF01535	563 - 587	4.2e-06	PPR repeat
PPR_3	PF13812	594 - 640	2.9e-07	Pentatricopeptide repeat domain
PPR_1	PF12854	594 - 623	3.4e-13	PPR repeat
PPR_2	PF13041	595 - 643	3.8e-19	PPR repeat family
PPR	PF01535	598 - 628	1.8e-08	PPR repeat
TPR_24	PF23276	598 - 686	3.1e-06	Fungal tetratrico peptide repeats
PPR_3	PF13812	619 - 679	5.3e-06	Pentatricopeptide repeat domain
PPR_1	PF12854	626 - 659	8.4e-08	PPR repeat
PPR_2	PF13041	630 - 678	2.7e-07	PPR repeat family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Orthologous Genes (Group: OG0015139)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G08310 AT5G08310
fragaria_vesca	FvH4_4g11722 FvH4_4g11723
prunus_persica	Prupe.7G271800_v2.0.a1
rosa_chinensis	RchiOBHm_Chr4g0408911
rosa_laevigata	RLG00000008609
rosa_multiflora	Rmu_sc0037819.1_g000001 Rmu_ssc0000300.1_g000001
rosa_roxburghii	Rroxscaffold_5G00353290
rosa_rugosa	Rorug04G0088600
rosa_samantha	Rh4AG152300 Rh4BG149800 Rh4CG160700 Rh4DG145800
rosa_wichuraiana	Rw4G012550

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	1700
AciI	CCGC	2 cut(s)	419, 1580
AclWI	GGATC	2 cut(s)	1016, 1769
AcoI	YGGCCR	1 cut(s)	154
AcsI	RAATTY	2 cut(s)	1091, 1459
AcuI	CTGAAG	2 cut(s)	974, 1443
AcvI	CACGTG	1 cut(s)	123
AfaI	GTAC	3 cut(s)	75, 407, 732
AfiI	CCNNNNNNNGG	2 cut(s)	146, 1336
AflIII	ACRYGT	1 cut(s)	408
AjiI	CACGTC	1 cut(s)	1132
AjnI	CCWGG	3 cut(s)	191, 1468, 1757
Alw21I	GWGCWC	2 cut(s)	128, 1888
Alw26I	GTCTC	2 cut(s)	1928, 2038
AlwI	GGATC	2 cut(s)	1016, 1769
Ama87I	CYCGRG	1 cut(s)	1994
AoxI	GGCC	5 cut(s)	14, 148, 154, 1081, 1617
ApeKI	GCWGC	1 cut(s)	1418
ApoI	RAATTY	2 cut(s)	1091, 1459
ArsI	GACNNNNNNTTYG	2 cut(s)	548, 580
Asp700I	GAANNNNTTC	1 cut(s)	1644
AspLEI	GCGC	1 cut(s)	198
AsuHPI	GGTGA	4 cut(s)	560, 1672, 1739, 1781
AsuII	TTCGAA	1 cut(s)	453
AvaI	CYCGRG	1 cut(s)	1994
AxyI	CCTNAGG	1 cut(s)	830
BalI	TGGCCA	1 cut(s)	156
BanII	GRGCYC	1 cut(s)	747
BauI	CACGAG	1 cut(s)	1388
BbrPI	CACGTG	1 cut(s)	123
BbsI	GAAGAC	3 cut(s)	620, 701, 1134
Bbv12I	GWGCWC	2 cut(s)	128, 1888
BbvI	GCAGC	1 cut(s)	1430
BccI	CCATC	6 cut(s)	1073, 1231, 1556, 1651, 1808, 1966
BceAI	ACGGC	2 cut(s)	976, 1553
BciT130I	CCWGG	3 cut(s)	193, 1470, 1759
BcoDI	GTCTC	2 cut(s)	1928, 2038
BfaI	CTAG	1 cut(s)	1475
BfmI	CTRYAG	1 cut(s)	1297
BfoI	RGCGCY	1 cut(s)	199
BfuAI	ACCTGC	1 cut(s)	1700
BisI	GCNGC	2 cut(s)	420, 1419
BlsI	GCNGC	2 cut(s)	421, 1420
Bme1390I	CCNGG	3 cut(s)	193, 1470, 1759
BmeT110I	CYCGRG	1 cut(s)	1994
BmgBI	CACGTC	1 cut(s)	1132
BmiI	GGNNCC	2 cut(s)	173, 964
BmrFI	CCNGG	3 cut(s)	193, 1470, 1759
BpiI	GAAGAC	3 cut(s)	620, 701, 1134
BpmI	CTGGAG	1 cut(s)	1741
Bpu14I	TTCGAA	1 cut(s)	453
BpuEI	CTTGAG	1 cut(s)	902
BsaAI	YACGTR	1 cut(s)	123
BsaBI	GATNNNNATC	1 cut(s)	1020
BsaI	GGTCTC	1 cut(s)	1928
BsaJI	CCNNGG	6 cut(s)	103, 151, 157, 191, 1364, 1468
BsaXI	ACNNNNNCTCC	2 cut(s)	314, 344
Bsc4I	CCNNNNNNNGG	2 cut(s)	146, 1336
Bse1I	ACTGG	1 cut(s)	811
Bse21I	CCTNAGG	1 cut(s)	830
Bse3DI	GCAATG	2 cut(s)	445, 1002
Bse8I	GATNNNNATC	1 cut(s)	1020
BseBI	CCWGG	3 cut(s)	193, 1470, 1759
BseDI	CCNNGG	6 cut(s)	103, 151, 157, 191, 1364, 1468
BseGI	GGATG	6 cut(s)	57, 388, 862, 882, 1315, 1886
BseJI	GATNNNNATC	1 cut(s)	1020
BseLI	CCNNNNNNNGG	2 cut(s)	146, 1336
BseMI	GCAATG	2 cut(s)	445, 1002
BseMII	CTCAG	2 cut(s)	1220, 1695
BseNI	ACTGG	1 cut(s)	811
BseXI	GCAGC	1 cut(s)	1430
BseYI	CCCAGC	1 cut(s)	495
BshFI	GGCC	5 cut(s)	16, 150, 156, 1083, 1619
BsiHKAI	GWGCWC	2 cut(s)	128, 1888
BsiHKCI	CYCGRG	1 cut(s)	1994
BslI	CCNNNNNNNGG	2 cut(s)	146, 1336
BsmAI	GTCTC	2 cut(s)	1928, 2038
BsnI	GGCC	5 cut(s)	16, 150, 156, 1083, 1619
Bso31I	GGTCTC	1 cut(s)	1928
BsoBI	CYCGRG	1 cut(s)	1994
Bsp119I	TTCGAA	1 cut(s)	453
Bsp1286I	GDGCHC	3 cut(s)	128, 747, 1888
Bsp143I	GATC	3 cut(s)	1021, 1525, 1761
Bsp19I	CCATGG	3 cut(s)	103, 157, 1364
BspACI	CCGC	2 cut(s)	419, 1580
BspANI	GGCC	5 cut(s)	16, 150, 156, 1083, 1619
BspCNI	CTCAG	2 cut(s)	1221, 1694
BspHI	TCATGA	2 cut(s)	1183, 1966
BspLI	GGNNCC	2 cut(s)	173, 964
BspMI	ACCTGC	1 cut(s)	1700
BspPI	GGATC	2 cut(s)	1016, 1769
BspQI	GCTCTTC	1 cut(s)	675
BspT104I	TTCGAA	1 cut(s)	453
BspTNI	GGTCTC	1 cut(s)	1928
BsrDI	GCAATG	2 cut(s)	445, 1002
BsrI	ACTGG	1 cut(s)	811
BssECI	CCNNGG	6 cut(s)	103, 151, 157, 191, 1364, 1468
BssMI	GATC	3 cut(s)	1021, 1525, 1761
BssSI	CACGAG	1 cut(s)	1388
BssT1I	CCWWGG	4 cut(s)	103, 151, 157, 1364
Bst2BI	CACGAG	1 cut(s)	1388
Bst2UI	CCWGG	3 cut(s)	193, 1470, 1759
Bst4CI	ACNGT	5 cut(s)	314, 1072, 1191, 1492, 1807
Bst6I	CTCTTC	5 cut(s)	356, 675, 903, 1297, 1971
BstBAI	YACGTR	1 cut(s)	123
BstBI	TTCGAA	1 cut(s)	453
BstC8I	GCNNGC	1 cut(s)	1385
BstDEI	CTNAG	5 cut(s)	212, 333, 830, 1229, 1681
BstDSI	CCRYGG	3 cut(s)	103, 157, 1364
BstENI	CCTNNNNNAGG	1 cut(s)	1334
BstF5I	GGATG	6 cut(s)	57, 388, 862, 882, 1315, 1886
BstH2I	RGCGCY	1 cut(s)	199
BstHHI	GCGC	1 cut(s)	198
BstKTI	GATC	3 cut(s)	1024, 1528, 1764
BstMAI	GTCTC	2 cut(s)	1928, 2038
BstMBI	GATC	3 cut(s)	1021, 1525, 1761
BstMWI	GCNNNNNNNGC	3 cut(s)	22, 1393, 1424
BstNI	CCWGG	3 cut(s)	193, 1470, 1759
BstSCI	CCNGG	3 cut(s)	191, 1468, 1757
BstSFI	CTRYAG	1 cut(s)	1297
BstV1I	GCAGC	1 cut(s)	1430
BstV2I	GAAGAC	3 cut(s)	620, 701, 1134
BstX2I	RGATCY	1 cut(s)	1761
BstYI	RGATCY	1 cut(s)	1761
Bsu36I	CCTNAGG	1 cut(s)	830
BsuRI	GGCC	5 cut(s)	16, 150, 156, 1083, 1619
BtgI	CCRYGG	3 cut(s)	103, 157, 1364
BtrI	CACGTC	1 cut(s)	1132
BtsCI	GGATG	6 cut(s)	57, 388, 862, 882, 1315, 1886
BveI	ACCTGC	1 cut(s)	1700
Cac8I	GCNNGC	1 cut(s)	1385
CciI	TCATGA	2 cut(s)	1183, 1966
CfoI	GCGC	1 cut(s)	198
Csp6I	GTAC	3 cut(s)	74, 406, 731
CviQI	GTAC	3 cut(s)	74, 406, 731
DdeI	CTNAG	5 cut(s)	212, 333, 830, 1229, 1681
DpnI	GATC	3 cut(s)	1023, 1527, 1763
DpnII	GATC	3 cut(s)	1021, 1525, 1761
DraI	TTTAAA	1 cut(s)	1222
EaeI	YGGCCR	1 cut(s)	154
Eam1104I	CTCTTC	5 cut(s)	356, 675, 903, 1297, 1971
EarI	CTCTTC	5 cut(s)	356, 675, 903, 1297, 1971
Eco130I	CCWWGG	4 cut(s)	103, 151, 157, 1364
Eco147I	AGGCCT	1 cut(s)	150
Eco24I	GRGCYC	1 cut(s)	747
Eco31I	GGTCTC	1 cut(s)	1928
Eco57I	CTGAAG	2 cut(s)	974, 1443
Eco72I	CACGTG	1 cut(s)	123
Eco81I	CCTNAGG	1 cut(s)	830
Eco88I	CYCGRG	1 cut(s)	1994
EcoNI	CCTNNNNNAGG	1 cut(s)	1334
EcoRII	CCWGG	3 cut(s)	191, 1468, 1757
EcoT14I	CCWWGG	4 cut(s)	103, 151, 157, 1364
EcoT22I	ATGCAT	1 cut(s)	486
EcoT38I	GRGCYC	1 cut(s)	747
ErhI	CCWWGG	4 cut(s)	103, 151, 157, 1364
FalI	AAGNNNNNCTT	2 cut(s)	1308, 1340
Fnu4HI	GCNGC	2 cut(s)	420, 1419
FokI	GGATG	6 cut(s)	44, 395, 869, 889, 1322, 1893
FriOI	GRGCYC	1 cut(s)	747
Fsp4HI	GCNGC	2 cut(s)	420, 1419
FspBI	CTAG	1 cut(s)	1475
GlaI	GCGC	1 cut(s)	197
GluI	GCNGC	2 cut(s)	420, 1419
GsaI	CCCAGC	1 cut(s)	499
GsuI	CTGGAG	1 cut(s)	1741
HaeII	RGCGCY	1 cut(s)	199
HaeIII	GGCC	5 cut(s)	16, 150, 156, 1083, 1619
HhaI	GCGC	1 cut(s)	198
Hin6I	GCGC	1 cut(s)	196
HinP1I	GCGC	1 cut(s)	196
HincII	GTYRAC	3 cut(s)	414, 556, 970
HindII	GTYRAC	3 cut(s)	414, 556, 970
HindIII	AAGCTT	2 cut(s)	1425, 1530
HinfI	GANTC	8 cut(s)	595, 631, 650, 807, 825, 1010, 1135, 1164
HphI	GGTGA	4 cut(s)	560, 1672, 1739, 1781
Hpy166II	GTNNAC	7 cut(s)	76, 408, 414, 556, 970, 1355, 1772
Hpy188I	TCNGA	9 cut(s)	594, 790, 817, 856, 1015, 1140, 1230, 1633, 1650
Hpy8I	GTNNAC	7 cut(s)	76, 408, 414, 556, 970, 1355, 1772
HpyCH4III	ACNGT	5 cut(s)	314, 1072, 1191, 1492, 1807
HpyCH4IV	ACGT	4 cut(s)	122, 410, 1131, 1788
HpyF10VI	GCNNNNNNNGC	3 cut(s)	22, 1393, 1424
HpyF3I	CTNAG	5 cut(s)	212, 333, 830, 1229, 1681
HpySE526I	ACGT	4 cut(s)	122, 410, 1131, 1788
HspAI	GCGC	1 cut(s)	196
Kzo9I	GATC	3 cut(s)	1021, 1525, 1761
LguI	GCTCTTC	1 cut(s)	675
LmnI	GCTCC	5 cut(s)	161, 586, 968, 1240, 1891
Lsp1109I	GCAGC	1 cut(s)	1430
MaeI	CTAG	1 cut(s)	1475
MaeII	ACGT	4 cut(s)	122, 410, 1131, 1788
MaeIII	GTNAC	1 cut(s)	1687
MalI	GATC	3 cut(s)	1023, 1527, 1763
MboI	GATC	3 cut(s)	1021, 1525, 1761
MfeI	CAATTG	2 cut(s)	83, 176
MflI	RGATCY	1 cut(s)	1761
MhlI	GDGCHC	3 cut(s)	128, 747, 1888
MlsI	TGGCCA	1 cut(s)	156
MluCI	AATT	9 cut(s)	83, 176, 350, 1091, 1179, 1205, 1251, 1459, 1896
MluNI	TGGCCA	1 cut(s)	156
MlyI	GAGTC	1 cut(s)	659
MmeI	TCCRAC	3 cut(s)	85, 300, 1104
Mox20I	TGGCCA	1 cut(s)	156
Mph1103I	ATGCAT	1 cut(s)	486
MroXI	GAANNNNTTC	1 cut(s)	1644
MscI	TGGCCA	1 cut(s)	156
MseI	TTAA	4 cut(s)	425, 1115, 1221, 1326
MslI	CAYNNNNRTG	1 cut(s)	524
Msp20I	TGGCCA	1 cut(s)	156
MspA1I	CMGCKG	1 cut(s)	1421
MspR9I	CCNGG	3 cut(s)	193, 1470, 1759
MunI	CAATTG	2 cut(s)	83, 176
MvaI	CCWGG	3 cut(s)	193, 1470, 1759
MwoI	GCNNNNNNNGC	3 cut(s)	22, 1393, 1424
NcoI	CCATGG	3 cut(s)	103, 157, 1364
NdeII	GATC	3 cut(s)	1021, 1525, 1761
NlaIV	GGNNCC	2 cut(s)	173, 964
NsiI	ATGCAT	1 cut(s)	486
NspV	TTCGAA	1 cut(s)	453
PagI	TCATGA	2 cut(s)	1183, 1966
PceI	AGGCCT	1 cut(s)	150
PciSI	GCTCTTC	1 cut(s)	675
PdmI	GAANNNNTTC	1 cut(s)	1644
PfeI	GAWTC	7 cut(s)	595, 631, 807, 825, 1010, 1135, 1164
PfoI	TCCNGGA	1 cut(s)	1757
PkrI	GCNGC	2 cut(s)	421, 1420
PleI	GAGTC	1 cut(s)	658
PmaCI	CACGTG	1 cut(s)	123
PmlI	CACGTG	1 cut(s)	123
PpsI	GAGTC	1 cut(s)	658
Ppu21I	YACGTR	1 cut(s)	123
Psp6I	CCWGG	3 cut(s)	191, 1468, 1757
PspCI	CACGTG	1 cut(s)	123
PspFI	CCCAGC	1 cut(s)	495
PspGI	CCWGG	3 cut(s)	191, 1468, 1757
PspN4I	GGNNCC	2 cut(s)	173, 964
PsuI	RGATCY	1 cut(s)	1761
PvuII	CAGCTG	1 cut(s)	1421
RsaI	GTAC	3 cut(s)	75, 407, 732
RsaNI	GTAC	3 cut(s)	74, 406, 731
RseI	CAYNNNNRTG	1 cut(s)	524
SapI	GCTCTTC	1 cut(s)	675
SaqAI	TTAA	4 cut(s)	425, 1115, 1221, 1326
SatI	GCNGC	2 cut(s)	420, 1419
Sau3AI	GATC	3 cut(s)	1021, 1525, 1761
SchI	GAGTC	1 cut(s)	659
ScrFI	CCNGG	3 cut(s)	193, 1470, 1759
SduI	GDGCHC	3 cut(s)	128, 747, 1888
SfcI	CTRYAG	1 cut(s)	1297
SfuI	TTCGAA	1 cut(s)	453
SmiMI	CAYNNNNRTG	1 cut(s)	524
SmlI	CTYRAG	2 cut(s)	18, 881
SmoI	CTYRAG	2 cut(s)	18, 881
Sse9I	AATT	9 cut(s)	83, 176, 350, 1091, 1179, 1205, 1251, 1459, 1896
SseBI	AGGCCT	1 cut(s)	150
SsiI	CCGC	2 cut(s)	419, 1580
SspI	AATATT	1 cut(s)	1284
SspMI	CTAG	1 cut(s)	1475
StuI	AGGCCT	1 cut(s)	150
StyD4I	CCNGG	3 cut(s)	191, 1468, 1757
StyI	CCWWGG	4 cut(s)	103, 151, 157, 1364
TaaI	ACNGT	5 cut(s)	314, 1072, 1191, 1492, 1807
TaiI	ACGT	4 cut(s)	125, 413, 1134, 1791
TaqI	TCGA	4 cut(s)	128, 344, 399, 453
TasI	AATT	9 cut(s)	83, 176, 350, 1091, 1179, 1205, 1251, 1459, 1896
TatI	WGTACW	1 cut(s)	730
TauI	GCSGC	1 cut(s)	422
TfiI	GAWTC	7 cut(s)	595, 631, 807, 825, 1010, 1135, 1164
Tru1I	TTAA	4 cut(s)	425, 1115, 1221, 1326
Tru9I	TTAA	4 cut(s)	425, 1115, 1221, 1326
TseI	GCWGC	1 cut(s)	1418
TspGWI	ACGGA	2 cut(s)	889, 955
XagI	CCTNNNNNAGG	1 cut(s)	1334
XapI	RAATTY	2 cut(s)	1091, 1459
XcmI	CCANNNNNNNNNTGG	1 cut(s)	164
XmnI	GAANNNNTTC	1 cut(s)	1644
XspI	CTAG	1 cut(s)	1475
Zsp2I	ATGCAT	1 cut(s)	486

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.