Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr4B

Orthogroup ID

OG0015139

Physical Location & Seq

Genomic Coordinates Reverse (-)

26809794 .. 26811755

Gene Structure 1962 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh4BG149800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1962 bp

ATGGCTTCACACCTATCACATGCTCGACAAAATGCCCCAATGAGAGCCCTGGCCATGGAAGTTGTGGATTCCAATTGTTATATGACCCCTGGAGCTTTGGGTTTCTTTCTAAGATGCTTAGGGAGTGTGGAGTTGGTTGAAGAAGCCAACATTTTGTTTGATCAAGTTTGTACAAAGGGTCTTTGTGTTCCAAATAGCTATAGCTATAACTGTTTGTTGGAGGCTATATCCAAGTCTGGTTCGATTGAGTTGCTTGAGAAGCGAATGAAAGAAATGGGGGATTCTGGTTTGGAATTCGATAGGTACACATTGACTGCGGCGTTGAAGGTTTATTGCAATGCAAGGAAGTTCGAAAAGGCTTTGAGTGTGTACAATGAAATGCATGAGAAGAGCTGGGTGGATGCACATGCCATGTCTATCTTGGTGTTGCATTTGAGCAAGTCGGGTGAGGTGGACAAGGCTTTTGATTTGATTGAAAGAATGGAGCATGGCAATCTTGGTTTGAATGAGAAGACATTTCATGTTTTGATTCATGGGTTTGTGAGGGAGTCCAGAGTGGATAAGGCCATCCAACTGTTTGATAAAATGCGGAAATCAGGTTTCTCTGTTGACGTTTCTCTTTATGATGTACTGATCGGAGGGCTCTGTAAGAATAGAGAGATTGAGAAAGCCTTGTCTATGTACTCGGAAATGAAGGATTTGGGAATCCATTCTGATGTTAGAGTCCTTACGAAGCTCATATTAGCTTGTTCTGATGAAAGGGAAATGATTCAGATGCTTGAGGAAAGTCAGGAAGATTTAAATGAAGAGGATATGCTTTTGCTTTGCAGTTCTGTGCTGAATAGTCTGGTTAATAACGACTCCATTGATAGAGCTTATCGACTGCTTCAGGCAATGATGAAAAAAGAATCTGATGCTGATCCAGTAGTAAAGAAAAAGGTTCGTCCTACCACCCGTTCATTTGAAATTGTTATTGATGGCCTTCTAAAATTTGGTAAGTTGGCCGTGGCATTAAGCCTTTTGGAAGATATGAATCAGATTGGGTGTAAACCAAATGTAGTAACTTACAATAATGTAATTGATGAACTGTGCAAATCAAATAGATTGGAGGAAAGTTATAAGCTTCTGAGAGAGATGGAGCAATCTGGAATTGAACCAACACATTTTACCCATAACTCAATATTTGGTTGCCACTGTAGGAGAAAGGATGTTCAAGGAGCCCTTAACCTAGTGAAGGAGATGCGTGTTTGTGGACATGAACCATGGAAAAAACATTCCACCTTGCTTGTGAAGCAGTTGTGCGAACATGGAAAGGCAGCTGAAGCTTGTAATTTTCTTGATAAAATGGTTGAAGTAAGTTTTGCCCCTCGTCTAGTTTCCTACTCGGCGGTTATTAGTGGATTACTCAAAATTCAAGAAGTAGATCGAGCTTTACAGCTGTTTCAGGATATCTGTGCTGATGGTTATTGTCCTGATGTAGTTTTCTATAACATATTGATAAATGGTCTGTGTAAGGCCAAAAGAGTCTCGGAAGCAGAAAACTTTCTGAAGGAGATGGTCATGAAGGGGCTTGTTCCCTCAGTTGTAACCTACAATCTGCTGATAAATGGATATTGTAAAAACGGTGATGTAGATAAAGCCATGACGTGCCTCTCCAGGATCTTTGATGAAGCCAGAGAACCTAACGTGATTACATACACCACGTTAATAGACGGATTATGCTATGCTGGAAGGATTGATGATGCTCTTATGCTTTGGAATGACATGGCGAAGAAAGGATGTGCTCCAAACAGAATTGCTTTTATGGCTCTTATTAACGGTCTTTGCAAGTGTGGTAAGCCTGCTGAGGCTTTAGCCTATCTTCGTGAGATGGAAGAGAAGGAAATGAAACCTGGGATACATGTATATTCAGCAGTAATAAGTTCTTTAATCTCTAATTTAAACCTTCCCCCTGCCACTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_1 PPR_2 PPR_3

Protein Analysis

653

Amino Acids

73.34

Weight (kDa)

5.97

Isoelectric Point (pI)

34.61

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_long	PF17177	51 - 208	7.7e-07	Pentacotripeptide-repeat region of PRORP
PPR_2	PF13041	64 - 113	9.3e-07	PPR repeat family
TPR_24	PF23276	73 - 195	2.7e-07	Fungal tetratrico peptide repeats
PPR_2	PF13041	134 - 182	9.6e-07	PPR repeat family
PPR_2	PF13041	171 - 217	2.4e-10	PPR repeat family
PPR	PF01535	172 - 201	3.5e-06	PPR repeat
PPR_2	PF13041	204 - 250	1.1e-08	PPR repeat family
PPR	PF01535	208 - 236	1.7e-06	PPR repeat
PPR_2	PF13041	316 - 357	3.7e-08	PPR repeat family
PPR_long	PF17177	335 - 451	1.5e-06	Pentacotripeptide-repeat region of PRORP
PPR_3	PF13812	339 - 397	2.8e-08	Pentatricopeptide repeat domain
PPR_1	PF12854	348 - 380	3.1e-12	PPR repeat
PPR_2	PF13041	351 - 400	1.4e-15	PPR repeat family
PPR	PF01535	354 - 384	1.3e-06	PPR repeat
PPR_long	PF17177	469 - 555	5.6e-06	Pentacotripeptide-repeat region of PRORP
PPR_3	PF13812	480 - 540	2.9e-08	Pentatricopeptide repeat domain
PPR_1	PF12854	487 - 520	5.1e-13	PPR repeat
PPR_2	PF13041	491 - 540	3.2e-18	PPR repeat family
PPR	PF01535	494 - 524	1.4e-07	PPR repeat
PPR_1	PF12854	522 - 548	2.6e-12	PPR repeat
PPR_2	PF13041	526 - 574	6.1e-17	PPR repeat family
PPR	PF01535	529 - 553	2.7e-07	PPR repeat
PPR_1	PF12854	560 - 589	4.2e-12	PPR repeat
PPR_3	PF13812	560 - 606	7.3e-08	Pentatricopeptide repeat domain
PPR_2	PF13041	561 - 610	1.7e-17	PPR repeat family
PPR	PF01535	564 - 594	7.8e-08	PPR repeat
PPR_1	PF12854	592 - 625	6.8e-08	PPR repeat
PPR_2	PF13041	596 - 643	3.6e-08	PPR repeat family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Orthologous Genes (Group: OG0015139)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G08310 AT5G08310
fragaria_vesca	FvH4_4g11722 FvH4_4g11723
prunus_persica	Prupe.7G271800_v2.0.a1
rosa_chinensis	RchiOBHm_Chr4g0408911
rosa_laevigata	RLG00000008609
rosa_multiflora	Rmu_sc0037819.1_g000001 Rmu_ssc0000300.1_g000001
rosa_roxburghii	Rroxscaffold_5G00353290
rosa_rugosa	Rorug04G0088600
rosa_samantha	Rh4AG152300 Rh4BG149800 Rh4CG160700 Rh4DG145800
rosa_wichuraiana	Rw4G012550

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1119
AciI	CCGC	3 cut(s)	317, 589, 1388
AclWI	GGATC	2 cut(s)	914, 1667
AcoI	YGGCCR	2 cut(s)	51, 1002
AcsI	RAATTY	3 cut(s)	293, 989, 1410
AcuI	CTGAAG	3 cut(s)	872, 1341, 1568
AfaI	GTAC	5 cut(s)	172, 305, 371, 630, 683
AfiI	CCNNNNNNNGG	2 cut(s)	55, 1234
AflIII	ACRYGT	1 cut(s)	1900
AgsI	TTSAA	9 cut(s)	140, 325, 476, 505, 965, 1154, 1214, 1352, 1415
AjiI	CACGTC	1 cut(s)	1647
AjnI	CCWGG	4 cut(s)	48, 88, 1655, 1891
Alw21I	GWGCWC	1 cut(s)	1786
Alw26I	GTCTC	1 cut(s)	1531
AlwI	GGATC	2 cut(s)	914, 1667
AoxI	GGCC	5 cut(s)	51, 564, 979, 1002, 1515
ApeKI	GCWGC	1 cut(s)	1316
ApoI	RAATTY	3 cut(s)	293, 989, 1410
ArsI	GACNNNNNNTTYG	2 cut(s)	446, 478
Asp700I	GAANNNNTTC	3 cut(s)	709, 768, 1542
AsuHPI	GGTGA	2 cut(s)	458, 1637
AsuII	TTCGAA	1 cut(s)	351
BalI	TGGCCA	1 cut(s)	53
BanII	GRGCYC	3 cut(s)	49, 645, 1222
BbsI	GAAGAC	1 cut(s)	518
Bbv12I	GWGCWC	1 cut(s)	1786
BbvCI	CCTCAGC	1 cut(s)	1845
BbvI	GCAGC	1 cut(s)	1328
BccI	CCATC	6 cut(s)	575, 971, 1129, 1454, 1549, 1864
BceAI	ACGGC	1 cut(s)	989
BcgI	CGANNNNNNTGC	2 cut(s)	232, 266
BciT130I	CCWGG	4 cut(s)	50, 90, 1657, 1893
BciVI	GTATCC	1 cut(s)	1890
BclI	TGATCA	1 cut(s)	160
BcoDI	GTCTC	1 cut(s)	1531
BfaI	CTAG	2 cut(s)	1229, 1373
BfmI	CTRYAG	2 cut(s)	199, 1195
BfuI	GTATCC	1 cut(s)	1890
BisI	GCNGC	2 cut(s)	318, 1317
BlsI	GCNGC	2 cut(s)	319, 1318
Bme1390I	CCNGG	4 cut(s)	50, 90, 1657, 1893
BmgBI	CACGTC	1 cut(s)	1647
BmiI	GGNNCC	1 cut(s)	1219
BmrFI	CCNGG	4 cut(s)	50, 90, 1657, 1893
BmsI	GCATC	6 cut(s)	104, 391, 765, 904, 1230, 1732
BpiI	GAAGAC	1 cut(s)	518
BpmI	CTGGAG	2 cut(s)	111, 1639
Bpu10I	CCTNAGC	2 cut(s)	118, 1845
Bpu14I	TTCGAA	1 cut(s)	351
BpuEI	CTTGAG	2 cut(s)	275, 800
BsaBI	GATNNNNATC	2 cut(s)	918, 1032
BsaJI	CCNNGG	6 cut(s)	48, 54, 88, 1005, 1262, 1892
Bsc4I	CCNNNNNNNGG	2 cut(s)	55, 1234
Bse1I	ACTGG	1 cut(s)	923
Bse3DI	GCAATG	2 cut(s)	343, 900
Bse8I	GATNNNNATC	2 cut(s)	918, 1032
BseBI	CCWGG	4 cut(s)	50, 90, 1657, 1893
BseDI	CCNNGG	6 cut(s)	48, 54, 88, 1005, 1262, 1892
BseGI	GGATG	4 cut(s)	406, 567, 1213, 1784
BseJI	GATNNNNATC	2 cut(s)	918, 1032
BseLI	CCNNNNNNNGG	2 cut(s)	55, 1234
BseMI	GCAATG	2 cut(s)	343, 900
BseMII	CTCAG	3 cut(s)	1118, 1593, 1836
BseNI	ACTGG	1 cut(s)	923
BseXI	GCAGC	1 cut(s)	1328
BseYI	CCCAGC	1 cut(s)	393
BshFI	GGCC	5 cut(s)	53, 566, 981, 1004, 1517
BsiHKAI	GWGCWC	1 cut(s)	1786
BslI	CCNNNNNNNGG	2 cut(s)	55, 1234
BsmAI	GTCTC	1 cut(s)	1531
BsnI	GGCC	5 cut(s)	53, 566, 981, 1004, 1517
Bsp119I	TTCGAA	1 cut(s)	351
Bsp1286I	GDGCHC	4 cut(s)	49, 645, 1222, 1786
Bsp1407I	TGTACA	2 cut(s)	170, 369
Bsp143I	GATC	5 cut(s)	160, 633, 919, 1423, 1659
Bsp19I	CCATGG	2 cut(s)	54, 1262
BspACI	CCGC	3 cut(s)	317, 589, 1388
BspANI	GGCC	5 cut(s)	53, 566, 981, 1004, 1517
BspCNI	CTCAG	3 cut(s)	1119, 1592, 1837
BspHI	TCATGA	1 cut(s)	1560
BspLI	GGNNCC	1 cut(s)	1219
BspPI	GGATC	2 cut(s)	914, 1667
BspQI	GCTCTTC	1 cut(s)	383
BspT104I	TTCGAA	1 cut(s)	351
BsrDI	GCAATG	2 cut(s)	343, 900
BsrGI	TGTACA	2 cut(s)	170, 369
BsrI	ACTGG	1 cut(s)	923
BssECI	CCNNGG	6 cut(s)	48, 54, 88, 1005, 1262, 1892
BssMI	GATC	5 cut(s)	160, 633, 919, 1423, 1659
BssT1I	CCWWGG	2 cut(s)	54, 1262
Bst2UI	CCWGG	4 cut(s)	50, 90, 1657, 1893
Bst4CI	ACNGT	6 cut(s)	212, 576, 1089, 1196, 1625, 1820
Bst6I	CTCTTC	3 cut(s)	383, 801, 1869
BstAUI	TGTACA	2 cut(s)	170, 369
BstBI	TTCGAA	1 cut(s)	351
BstC8I	GCNNGC	1 cut(s)	1842
BstDEI	CTNAG	5 cut(s)	110, 118, 1127, 1579, 1845
BstDSI	CCRYGG	3 cut(s)	54, 1005, 1262
BstENI	CCTNNNNNAGG	1 cut(s)	1232
BstF5I	GGATG	4 cut(s)	406, 567, 1213, 1784
BstKTI	GATC	5 cut(s)	163, 636, 922, 1426, 1662
BstMAI	GTCTC	1 cut(s)	1531
BstMBI	GATC	5 cut(s)	160, 633, 919, 1423, 1659
BstMWI	GCNNNNNNNGC	4 cut(s)	259, 1291, 1322, 1805
BstNI	CCWGG	4 cut(s)	50, 90, 1657, 1893
BstNSI	RCATGY	3 cut(s)	23, 410, 1904
BstSCI	CCNGG	4 cut(s)	48, 88, 1655, 1891
BstSFI	CTRYAG	2 cut(s)	199, 1195
BstV1I	GCAGC	1 cut(s)	1328
BstV2I	GAAGAC	1 cut(s)	518
BstX2I	RGATCY	1 cut(s)	1659
BstYI	RGATCY	1 cut(s)	1659
BsuI	GTATCC	1 cut(s)	1890
BsuRI	GGCC	5 cut(s)	53, 566, 981, 1004, 1517
BtgI	CCRYGG	3 cut(s)	54, 1005, 1262
BtrI	CACGTC	1 cut(s)	1647
BtsCI	GGATG	4 cut(s)	406, 567, 1213, 1784
BtsIMutI	CAGTG	1 cut(s)	1192
Cac8I	GCNNGC	1 cut(s)	1842
CciI	TCATGA	1 cut(s)	1560
Csp6I	GTAC	5 cut(s)	171, 304, 370, 629, 682
CspCI	CAANNNNNGTGG	2 cut(s)	1267, 1302
CviQI	GTAC	5 cut(s)	171, 304, 370, 629, 682
DdeI	CTNAG	5 cut(s)	110, 118, 1127, 1579, 1845
DpnI	GATC	5 cut(s)	162, 635, 921, 1425, 1661
DpnII	GATC	5 cut(s)	160, 633, 919, 1423, 1659
DraI	TTTAAA	2 cut(s)	801, 1941
EaeI	YGGCCR	2 cut(s)	51, 1002
Eam1104I	CTCTTC	3 cut(s)	383, 801, 1869
EarI	CTCTTC	3 cut(s)	383, 801, 1869
Eco130I	CCWWGG	2 cut(s)	54, 1262
Eco24I	GRGCYC	3 cut(s)	49, 645, 1222
Eco32I	GATATC	1 cut(s)	1450
Eco57I	CTGAAG	3 cut(s)	872, 1341, 1568
EcoNI	CCTNNNNNAGG	1 cut(s)	1232
EcoRI	GAATTC	1 cut(s)	293
EcoRII	CCWGG	4 cut(s)	48, 88, 1655, 1891
EcoRV	GATATC	1 cut(s)	1450
EcoT14I	CCWWGG	2 cut(s)	54, 1262
EcoT22I	ATGCAT	1 cut(s)	384
EcoT38I	GRGCYC	3 cut(s)	49, 645, 1222
ErhI	CCWWGG	2 cut(s)	54, 1262
FalI	AAGNNNNNCTT	2 cut(s)	1206, 1238
FbaI	TGATCA	1 cut(s)	160
Fnu4HI	GCNGC	2 cut(s)	318, 1317
FokI	GGATG	4 cut(s)	413, 554, 1220, 1791
FriOI	GRGCYC	3 cut(s)	49, 645, 1222
Fsp4HI	GCNGC	2 cut(s)	318, 1317
FspBI	CTAG	2 cut(s)	1229, 1373
GluI	GCNGC	2 cut(s)	318, 1317
GsaI	CCCAGC	1 cut(s)	397
GsuI	CTGGAG	2 cut(s)	111, 1639
HaeIII	GGCC	5 cut(s)	53, 566, 981, 1004, 1517
HincII	GTYRAC	1 cut(s)	610
HindII	GTYRAC	1 cut(s)	610
HindIII	AAGCTT	2 cut(s)	1121, 1323
HphI	GGTGA	2 cut(s)	458, 1637
Hpy166II	GTNNAC	6 cut(s)	306, 370, 454, 610, 1049, 1253
Hpy188III	TCNNGA	9 cut(s)	552, 791, 1146, 1337, 1415, 1445, 1472, 1561, 1865
Hpy8I	GTNNAC	6 cut(s)	306, 370, 454, 610, 1049, 1253
HpyAV	CCTTC	9 cut(s)	319, 688, 992, 1228, 1543, 1558, 1725, 1873, 1955
HpyCH4III	ACNGT	6 cut(s)	212, 576, 1089, 1196, 1625, 1820
HpyCH4IV	ACGT	4 cut(s)	612, 1646, 1686, 1703
HpyCH4V	TGCA	8 cut(s)	336, 341, 382, 404, 430, 828, 1092, 1827
HpyF10VI	GCNNNNNNNGC	4 cut(s)	259, 1291, 1322, 1805
HpyF3I	CTNAG	5 cut(s)	110, 118, 1127, 1579, 1845
HpySE526I	ACGT	4 cut(s)	612, 1646, 1686, 1703
Ksp22I	TGATCA	1 cut(s)	160
Kzo9I	GATC	5 cut(s)	160, 633, 919, 1423, 1659
LguI	GCTCTTC	1 cut(s)	383
LmnI	GCTCC	5 cut(s)	92, 484, 1138, 1217, 1789
Lsp1109I	GCAGC	1 cut(s)	1328
LweI	GCATC	6 cut(s)	104, 391, 765, 904, 1230, 1732
MaeI	CTAG	2 cut(s)	1229, 1373
MaeII	ACGT	4 cut(s)	612, 1646, 1686, 1703
MaeIII	GTNAC	2 cut(s)	1060, 1585
MalI	GATC	5 cut(s)	162, 635, 921, 1425, 1661
MboI	GATC	5 cut(s)	160, 633, 919, 1423, 1659
MboII	GAAGA	9 cut(s)	152, 400, 523, 806, 818, 1037, 1783, 1853, 1886
MfeI	CAATTG	1 cut(s)	73
MflI	RGATCY	1 cut(s)	1659
MhlI	GDGCHC	4 cut(s)	49, 645, 1222, 1786
MlsI	TGGCCA	1 cut(s)	53
MluNI	TGGCCA	1 cut(s)	53
MlyI	GAGTC	4 cut(s)	557, 732, 854, 1533
MmeI	TCCRAC	2 cut(s)	198, 595
Mox20I	TGGCCA	1 cut(s)	53
Mph1103I	ATGCAT	1 cut(s)	384
MroXI	GAANNNNTTC	3 cut(s)	709, 768, 1542
MscI	TGGCCA	1 cut(s)	53
MseI	TTAA	8 cut(s)	800, 852, 1013, 1224, 1706, 1815, 1928, 1940
MslI	CAYNNNNRTG	1 cut(s)	714
Msp20I	TGGCCA	1 cut(s)	53
MspA1I	CMGCKG	2 cut(s)	1319, 1438
MspR9I	CCNGG	4 cut(s)	50, 90, 1657, 1893
MunI	CAATTG	1 cut(s)	73
MvaI	CCWGG	4 cut(s)	50, 90, 1657, 1893
MwoI	GCNNNNNNNGC	4 cut(s)	259, 1291, 1322, 1805
NcoI	CCATGG	2 cut(s)	54, 1262
NdeII	GATC	5 cut(s)	160, 633, 919, 1423, 1659
NlaIV	GGNNCC	1 cut(s)	1219
NmeAIII	GCCGAG	1 cut(s)	1364
NsiI	ATGCAT	1 cut(s)	384
NspI	RCATGY	3 cut(s)	23, 410, 1904
NspV	TTCGAA	1 cut(s)	351
PagI	TCATGA	1 cut(s)	1560
PciI	ACATGT	1 cut(s)	1900
PciSI	GCTCTTC	1 cut(s)	383
PdmI	GAANNNNTTC	3 cut(s)	709, 768, 1542
PfeI	GAWTC	7 cut(s)	68, 281, 529, 705, 769, 908, 1033
PfoI	TCCNGGA	1 cut(s)	1655
PkrI	GCNGC	2 cut(s)	319, 1318
PleI	GAGTC	4 cut(s)	556, 731, 854, 1532
PpsI	GAGTC	4 cut(s)	556, 731, 854, 1532
PscI	ACATGT	1 cut(s)	1900
PsiI	TTATAA	1 cut(s)	1119
Psp6I	CCWGG	4 cut(s)	48, 88, 1655, 1891
PspFI	CCCAGC	1 cut(s)	393
PspGI	CCWGG	4 cut(s)	48, 88, 1655, 1891
PspN4I	GGNNCC	1 cut(s)	1219
PsuI	RGATCY	1 cut(s)	1659
PvuII	CAGCTG	2 cut(s)	1319, 1438
RsaI	GTAC	5 cut(s)	172, 305, 371, 630, 683
RsaNI	GTAC	5 cut(s)	171, 304, 370, 629, 682
RseI	CAYNNNNRTG	1 cut(s)	714
SapI	GCTCTTC	1 cut(s)	383
SaqAI	TTAA	8 cut(s)	800, 852, 1013, 1224, 1706, 1815, 1928, 1940
SatI	GCNGC	2 cut(s)	318, 1317
Sau3AI	GATC	5 cut(s)	160, 633, 919, 1423, 1659
SchI	GAGTC	4 cut(s)	557, 732, 854, 1533
ScrFI	CCNGG	4 cut(s)	50, 90, 1657, 1893
SduI	GDGCHC	4 cut(s)	49, 645, 1222, 1786
SfaNI	GCATC	6 cut(s)	104, 391, 765, 904, 1230, 1732
SfcI	CTRYAG	2 cut(s)	199, 1195
SfuI	TTCGAA	1 cut(s)	351
SmiI	ATTTAAAT	1 cut(s)	801
SmiMI	CAYNNNNRTG	1 cut(s)	714
SmlI	CTYRAG	2 cut(s)	254, 779
SmoI	CTYRAG	2 cut(s)	254, 779
SsiI	CCGC	3 cut(s)	317, 589, 1388
SspI	AATATT	1 cut(s)	1182
SspMI	CTAG	2 cut(s)	1229, 1373
StyD4I	CCNGG	4 cut(s)	48, 88, 1655, 1891
StyI	CCWWGG	2 cut(s)	54, 1262
SwaI	ATTTAAAT	1 cut(s)	801
TaaI	ACNGT	6 cut(s)	212, 576, 1089, 1196, 1625, 1820
TaiI	ACGT	4 cut(s)	615, 1649, 1689, 1706
TaqI	TCGA	6 cut(s)	25, 242, 297, 351, 880, 1426
TatI	WGTACW	4 cut(s)	170, 369, 628, 681
TauI	GCSGC	1 cut(s)	320
TfiI	GAWTC	7 cut(s)	68, 281, 529, 705, 769, 908, 1033
Tru1I	TTAA	8 cut(s)	800, 852, 1013, 1224, 1706, 1815, 1928, 1940
Tru9I	TTAA	8 cut(s)	800, 852, 1013, 1224, 1706, 1815, 1928, 1940
TscAI	CASTG	1 cut(s)	1199
TseI	GCWGC	1 cut(s)	1316
TspGWI	ACGGA	1 cut(s)	1728
TspRI	CASTG	1 cut(s)	1199
XagI	CCTNNNNNAGG	1 cut(s)	1232
XapI	RAATTY	3 cut(s)	293, 989, 1410
XceI	RCATGY	3 cut(s)	23, 410, 1904
XcmI	CCANNNNNNNNNTGG	2 cut(s)	61, 418
XmnI	GAANNNNTTC	3 cut(s)	709, 768, 1542
XspI	CTAG	2 cut(s)	1229, 1373
Zsp2I	ATGCAT	1 cut(s)	384

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.