Pentatricopeptide repeat-containing protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 3 cut(s) | 369, 538, 934 |
| AclWI | GGATC | 2 cut(s) | 476, 1058 |
| AcoI | YGGCCR | 2 cut(s) | 235, 535 |
| AcsI | RAATTY | 1 cut(s) | 117 |
| AcuI | CTGAAG | 2 cut(s) | 582, 827 |
| AdeI | CACNNNGTG | 1 cut(s) | 865 |
| AfaI | GTAC | 4 cut(s) | 203, 758, 1037, 1104 |
| AfeI | AGCGCT | 1 cut(s) | 403 |
| AflIII | ACRYGT | 2 cut(s) | 52, 793 |
| AgsI | TTSAA | 5 cut(s) | 376, 445, 1000, 1109, 1177 |
| AhlI | ACTAGT | 1 cut(s) | 838 |
| AjnI | CCWGG | 2 cut(s) | 733, 1187 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 900, 932 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 108, 140 |
| AluBI | AGCT | 3 cut(s) | 105, 533, 823 |
| AluI | AGCT | 3 cut(s) | 105, 533, 823 |
| Alw21I | GWGCWC | 1 cut(s) | 964 |
| Alw26I | GTCTC | 6 cut(s) | 5, 346, 574, 608, 633, 822 |
| AlwI | GGATC | 2 cut(s) | 476, 1058 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 1031 |
| Aor51HI | AGCGCT | 1 cut(s) | 403 |
| AoxI | GGCC | 2 cut(s) | 235, 535 |
| ApeKI | GCWGC | 2 cut(s) | 80, 820 |
| ApoI | RAATTY | 1 cut(s) | 117 |
| AspLEI | GCGC | 3 cut(s) | 192, 404, 671 |
| AspS9I | GGNCC | 2 cut(s) | 326, 737 |
| AsuHPI | GGTGA | 1 cut(s) | 1067 |
| AvaII | GGWCC | 2 cut(s) | 326, 737 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 1122, 1155 |
| BauI | CACGAG | 1 cut(s) | 100 |
| Bbv12I | GWGCWC | 1 cut(s) | 964 |
| BbvI | GCAGC | 2 cut(s) | 67, 832 |
| BccI | CCATC | 4 cut(s) | 26, 203, 494, 758 |
| BceAI | ACGGC | 2 cut(s) | 93, 250 |
| BciT130I | CCWGG | 2 cut(s) | 735, 1189 |
| BciVI | GTATCC | 1 cut(s) | 588 |
| BclI | TGATCA | 1 cut(s) | 856 |
| BcoDI | GTCTC | 6 cut(s) | 5, 346, 574, 608, 633, 822 |
| BcuI | ACTAGT | 1 cut(s) | 838 |
| BfaI | CTAG | 3 cut(s) | 816, 839, 1246 |
| BfoI | RGCGCY | 2 cut(s) | 405, 672 |
| BfuI | GTATCC | 1 cut(s) | 588 |
| BisI | GCNGC | 4 cut(s) | 81, 538, 821, 934 |
| BlsI | GCNGC | 4 cut(s) | 82, 539, 822, 935 |
| BmcAI | AGTACT | 1 cut(s) | 1104 |
| Bme1390I | CCNGG | 2 cut(s) | 735, 1189 |
| Bme18I | GGWCC | 2 cut(s) | 326, 737 |
| BmgT120I | GGNCC | 2 cut(s) | 326, 737 |
| BmiI | GGNNCC | 3 cut(s) | 126, 328, 732 |
| BmrFI | CCNGG | 2 cut(s) | 735, 1189 |
| BmsI | GCATC | 4 cut(s) | 499, 855, 895, 1156 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 343, 375, 1025, 1057 |
| BpmI | CTGGAG | 1 cut(s) | 556 |
| BsaI | GGTCTC | 1 cut(s) | 633 |
| BsaJI | CCNNGG | 5 cut(s) | 261, 342, 519, 965, 978 |
| Bse1I | ACTGG | 3 cut(s) | 26, 360, 1057 |
| Bse3DI | GCAATG | 1 cut(s) | 312 |
| BseBI | CCWGG | 2 cut(s) | 735, 1189 |
| BseDI | CCNNGG | 5 cut(s) | 261, 342, 519, 965, 978 |
| BseGI | GGATG | 7 cut(s) | 37, 214, 280, 391, 695, 846, 886 |
| BseMI | GCAATG | 1 cut(s) | 312 |
| BseMII | CTCAG | 5 cut(s) | 143, 171, 242, 1023, 1157 |
| BseNI | ACTGG | 3 cut(s) | 26, 360, 1057 |
| BseRI | GAGGAG | 1 cut(s) | 1033 |
| BseXI | GCAGC | 2 cut(s) | 67, 832 |
| BshFI | GGCC | 2 cut(s) | 237, 537 |
| BsiHKAI | GWGCWC | 1 cut(s) | 964 |
| BslFI | GGGAC | 2 cut(s) | 312, 1036 |
| BsmAI | GTCTC | 6 cut(s) | 5, 346, 574, 608, 633, 822 |
| BsmFI | GGGAC | 2 cut(s) | 312, 1036 |
| BsmI | GAATGC | 2 cut(s) | 192, 817 |
| BsnI | GGCC | 2 cut(s) | 237, 537 |
| Bso31I | GGTCTC | 1 cut(s) | 633 |
| Bsp1286I | GDGCHC | 1 cut(s) | 964 |
| Bsp1407I | TGTACA | 2 cut(s) | 201, 756 |
| Bsp143I | GATC | 7 cut(s) | 220, 309, 481, 549, 775, 856, 1063 |
| Bsp19I | CCATGG | 2 cut(s) | 342, 978 |
| BspACI | CCGC | 3 cut(s) | 369, 538, 934 |
| BspANI | GGCC | 2 cut(s) | 237, 537 |
| BspCNI | CTCAG | 5 cut(s) | 142, 172, 243, 1024, 1156 |
| BspHI | TCATGA | 2 cut(s) | 429, 1162 |
| BspLI | GGNNCC | 3 cut(s) | 126, 328, 732 |
| BspPI | GGATC | 2 cut(s) | 476, 1058 |
| BspTNI | GGTCTC | 1 cut(s) | 633 |
| BsrDI | GCAATG | 1 cut(s) | 312 |
| BsrGI | TGTACA | 2 cut(s) | 201, 756 |
| BsrI | ACTGG | 3 cut(s) | 26, 360, 1057 |
| BssECI | CCNNGG | 5 cut(s) | 261, 342, 519, 965, 978 |
| BssMI | GATC | 7 cut(s) | 220, 309, 481, 549, 775, 856, 1063 |
| BssSI | CACGAG | 1 cut(s) | 100 |
| BssT1I | CCWWGG | 5 cut(s) | 261, 342, 519, 965, 978 |
| Bst2BI | CACGAG | 1 cut(s) | 100 |
| Bst2UI | CCWGG | 2 cut(s) | 735, 1189 |
| Bst4CI | ACNGT | 2 cut(s) | 865, 1027 |
| Bst6I | CTCTTC | 4 cut(s) | 300, 342, 446, 785 |
| BstAUI | TGTACA | 2 cut(s) | 201, 756 |
| BstC8I | GCNNGC | 5 cut(s) | 258, 400, 491, 535, 884 |
| BstDEI | CTNAG | 5 cut(s) | 129, 180, 251, 1032, 1143 |
| BstDSI | CCRYGG | 2 cut(s) | 342, 978 |
| BstF5I | GGATG | 7 cut(s) | 37, 214, 280, 391, 695, 846, 886 |
| BstH2I | RGCGCY | 2 cut(s) | 405, 672 |
| BstHHI | GCGC | 3 cut(s) | 192, 404, 671 |
| BstKTI | GATC | 7 cut(s) | 223, 312, 484, 552, 778, 859, 1066 |
| BstMAI | GTCTC | 6 cut(s) | 5, 346, 574, 608, 633, 822 |
| BstMBI | GATC | 7 cut(s) | 220, 309, 481, 549, 775, 856, 1063 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 530 |
| BstNI | CCWGG | 2 cut(s) | 735, 1189 |
| BstNSI | RCATGY | 2 cut(s) | 56, 797 |
| BstSCI | CCNGG | 2 cut(s) | 733, 1187 |
| BstV1I | GCAGC | 2 cut(s) | 67, 832 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 268, 1087 |
| BsuI | GTATCC | 1 cut(s) | 588 |
| BsuRI | GGCC | 2 cut(s) | 237, 537 |
| BtgI | CCRYGG | 2 cut(s) | 342, 978 |
| BtgZI | GCGATG | 1 cut(s) | 492 |
| BtsCI | GGATG | 7 cut(s) | 37, 214, 280, 391, 695, 846, 886 |
| BtsIMutI | CAGTG | 3 cut(s) | 417, 558, 861 |
| Cac8I | GCNNGC | 5 cut(s) | 258, 400, 491, 535, 884 |
| CaiI | CAGNNNCTG | 1 cut(s) | 1031 |
| CciI | TCATGA | 2 cut(s) | 429, 1162 |
| CfoI | GCGC | 3 cut(s) | 192, 404, 671 |
| Cfr13I | GGNCC | 2 cut(s) | 326, 737 |
| Csp6I | GTAC | 4 cut(s) | 202, 757, 1036, 1103 |
| CviQI | GTAC | 4 cut(s) | 202, 757, 1036, 1103 |
| DdeI | CTNAG | 5 cut(s) | 129, 180, 251, 1032, 1143 |
| DpnI | GATC | 7 cut(s) | 222, 311, 483, 551, 777, 858, 1065 |
| DpnII | GATC | 7 cut(s) | 220, 309, 481, 549, 775, 856, 1063 |
| DraI | TTTAAA | 1 cut(s) | 609 |
| DraIII | CACNNNGTG | 1 cut(s) | 865 |
| EaeI | YGGCCR | 2 cut(s) | 235, 535 |
| Eam1104I | CTCTTC | 4 cut(s) | 300, 342, 446, 785 |
| EarI | CTCTTC | 4 cut(s) | 300, 342, 446, 785 |
| Eco130I | CCWWGG | 5 cut(s) | 261, 342, 519, 965, 978 |
| Eco31I | GGTCTC | 1 cut(s) | 633 |
| Eco47I | GGWCC | 2 cut(s) | 326, 737 |
| Eco47III | AGCGCT | 1 cut(s) | 403 |
| Eco57I | CTGAAG | 2 cut(s) | 582, 827 |
| EcoO109I | RGGNCCY | 1 cut(s) | 326 |
| EcoRII | CCWGG | 2 cut(s) | 733, 1187 |
| EcoT14I | CCWWGG | 5 cut(s) | 261, 342, 519, 965, 978 |
| EcoT22I | ATGCAT | 1 cut(s) | 900 |
| ErhI | CCWWGG | 5 cut(s) | 261, 342, 519, 965, 978 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1051, 1083 |
| FaqI | GGGAC | 2 cut(s) | 312, 1036 |
| FauI | CCCGC | 1 cut(s) | 362 |
| FbaI | TGATCA | 1 cut(s) | 856 |
| Fnu4HI | GCNGC | 4 cut(s) | 81, 538, 821, 934 |
| FokI | GGATG | 7 cut(s) | 44, 221, 287, 398, 682, 833, 873 |
| Fsp4HI | GCNGC | 4 cut(s) | 81, 538, 821, 934 |
| FspBI | CTAG | 3 cut(s) | 816, 839, 1246 |
| GlaI | GCGC | 3 cut(s) | 191, 403, 670 |
| GluI | GCNGC | 4 cut(s) | 81, 538, 821, 934 |
| GsuI | CTGGAG | 1 cut(s) | 556 |
| HaeII | RGCGCY | 2 cut(s) | 405, 672 |
| HaeIII | GGCC | 2 cut(s) | 237, 537 |
| HhaI | GCGC | 3 cut(s) | 192, 404, 671 |
| Hin6I | GCGC | 3 cut(s) | 190, 402, 669 |
| HinP1I | GCGC | 3 cut(s) | 190, 402, 669 |
| HinfI | GANTC | 3 cut(s) | 152, 438, 802 |
| HphI | GGTGA | 1 cut(s) | 1067 |
| Hpy166II | GTNNAC | 5 cut(s) | 99, 202, 757, 872, 1050 |
| Hpy188I | TCNGA | 6 cut(s) | 151, 181, 252, 807, 1033, 1146 |
| Hpy188III | TCNNGA | 4 cut(s) | 430, 497, 699, 1163 |
| Hpy8I | GTNNAC | 5 cut(s) | 99, 202, 757, 872, 1050 |
| Hpy99I | CGWCG | 1 cut(s) | 705 |
| HpyAV | CCTTC | 1 cut(s) | 557 |
| HpyCH4III | ACNGT | 2 cut(s) | 865, 1027 |
| HpyCH4IV | ACGT | 1 cut(s) | 910 |
| HpyCH4V | TGCA | 4 cut(s) | 229, 712, 898, 1157 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 530 |
| HpyF3I | CTNAG | 5 cut(s) | 129, 180, 251, 1032, 1143 |
| HpySE526I | ACGT | 1 cut(s) | 910 |
| HspAI | GCGC | 3 cut(s) | 190, 402, 669 |
| Ksp22I | TGATCA | 1 cut(s) | 856 |
| Kzo9I | GATC | 7 cut(s) | 220, 309, 481, 549, 775, 856, 1063 |
| LmnI | GCTCC | 3 cut(s) | 409, 736, 967 |
| Lsp1109I | GCAGC | 2 cut(s) | 67, 832 |
| LweI | GCATC | 4 cut(s) | 499, 855, 895, 1156 |
| MaeI | CTAG | 3 cut(s) | 816, 839, 1246 |
| MaeII | ACGT | 1 cut(s) | 910 |
| MaeIII | GTNAC | 1 cut(s) | 299 |
| MalI | GATC | 7 cut(s) | 222, 311, 483, 551, 777, 858, 1065 |
| MboI | GATC | 7 cut(s) | 220, 309, 481, 549, 775, 856, 1063 |
| MhlI | GDGCHC | 1 cut(s) | 964 |
| MluCI | AATT | 9 cut(s) | 117, 425, 456, 674, 683, 705, 713, 972, 1152 |
| MlyI | GAGTC | 1 cut(s) | 432 |
| MnlI | CCTC | 7 cut(s) | 138, 246, 585, 872, 940, 1054, 1140 |
| Mph1103I | ATGCAT | 1 cut(s) | 900 |
| MseI | TTAA | 1 cut(s) | 608 |
| MslI | CAYNNNNRTG | 6 cut(s) | 51, 197, 243, 477, 903, 983 |
| MspR9I | CCNGG | 2 cut(s) | 735, 1189 |
| Mva1269I | GAATGC | 2 cut(s) | 192, 817 |
| MvaI | CCWGG | 2 cut(s) | 735, 1189 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 530 |
| NcoI | CCATGG | 2 cut(s) | 342, 978 |
| NdeII | GATC | 7 cut(s) | 220, 309, 481, 549, 775, 856, 1063 |
| NlaIV | GGNNCC | 3 cut(s) | 126, 328, 732 |
| NmeAIII | GCCGAG | 1 cut(s) | 69 |
| NmuCI | GTSAC | 1 cut(s) | 299 |
| NsiI | ATGCAT | 1 cut(s) | 900 |
| NspI | RCATGY | 2 cut(s) | 56, 797 |
| PagI | TCATGA | 2 cut(s) | 429, 1162 |
| PciI | ACATGT | 2 cut(s) | 52, 793 |
| PctI | GAATGC | 2 cut(s) | 192, 817 |
| PfeI | GAWTC | 2 cut(s) | 152, 802 |
| PfoI | TCCNGGA | 1 cut(s) | 733 |
| PkrI | GCNGC | 4 cut(s) | 82, 539, 822, 935 |
| PleI | GAGTC | 1 cut(s) | 432 |
| PpsI | GAGTC | 1 cut(s) | 432 |
| PpuMI | RGGWCCY | 1 cut(s) | 326 |
| PscI | ACATGT | 2 cut(s) | 52, 793 |
| Psp5II | RGGWCCY | 1 cut(s) | 326 |
| Psp6I | CCWGG | 2 cut(s) | 733, 1187 |
| PspGI | CCWGG | 2 cut(s) | 733, 1187 |
| PspN4I | GGNNCC | 3 cut(s) | 126, 328, 732 |
| PspPI | GGNCC | 2 cut(s) | 326, 737 |
| PspPPI | RGGWCCY | 1 cut(s) | 326 |
| PstNI | CAGNNNCTG | 1 cut(s) | 1031 |
| RsaI | GTAC | 4 cut(s) | 203, 758, 1037, 1104 |
| RsaNI | GTAC | 4 cut(s) | 202, 757, 1036, 1103 |
| RseI | CAYNNNNRTG | 6 cut(s) | 51, 197, 243, 477, 903, 983 |
| SaqAI | TTAA | 1 cut(s) | 608 |
| SatI | GCNGC | 4 cut(s) | 81, 538, 821, 934 |
| Sau3AI | GATC | 7 cut(s) | 220, 309, 481, 549, 775, 856, 1063 |
| Sau96I | GGNCC | 2 cut(s) | 326, 737 |
| ScaI | AGTACT | 1 cut(s) | 1104 |
| SchI | GAGTC | 1 cut(s) | 432 |
| ScrFI | CCNGG | 2 cut(s) | 735, 1189 |
| SduI | GDGCHC | 1 cut(s) | 964 |
| SetI | ASST | 8 cut(s) | 107, 144, 328, 535, 568, 825, 913, 951 |
| SfaNI | GCATC | 4 cut(s) | 499, 855, 895, 1156 |
| SinI | GGWCC | 2 cut(s) | 326, 737 |
| SmiMI | CAYNNNNRTG | 6 cut(s) | 51, 197, 243, 477, 903, 983 |
| SpeI | ACTAGT | 1 cut(s) | 838 |
| Sse9I | AATT | 9 cut(s) | 117, 425, 456, 674, 683, 705, 713, 972, 1152 |
| SsiI | CCGC | 3 cut(s) | 369, 538, 934 |
| SspMI | CTAG | 3 cut(s) | 816, 839, 1246 |
| StyD4I | CCNGG | 2 cut(s) | 733, 1187 |
| StyI | CCWWGG | 5 cut(s) | 261, 342, 519, 965, 978 |
| TaaI | ACNGT | 2 cut(s) | 865, 1027 |
| TaiI | ACGT | 1 cut(s) | 913 |
| TasI | AATT | 9 cut(s) | 117, 425, 456, 674, 683, 705, 713, 972, 1152 |
| TatI | WGTACW | 4 cut(s) | 201, 756, 1035, 1102 |
| TauI | GCSGC | 2 cut(s) | 540, 936 |
| TfiI | GAWTC | 2 cut(s) | 152, 802 |
| Tru1I | TTAA | 1 cut(s) | 608 |
| Tru9I | TTAA | 1 cut(s) | 608 |
| TscAI | CASTG | 3 cut(s) | 424, 565, 868 |
| TseFI | GTSAC | 1 cut(s) | 299 |
| TseI | GCWGC | 2 cut(s) | 80, 820 |
| Tsp45I | GTSAC | 1 cut(s) | 299 |
| TspDTI | ATGAA | 6 cut(s) | 402, 418, 426, 446, 921, 996 |
| TspRI | CASTG | 3 cut(s) | 424, 565, 868 |
| VpaK11BI | GGWCC | 2 cut(s) | 326, 737 |
| XapI | RAATTY | 1 cut(s) | 117 |
| XceI | RCATGY | 2 cut(s) | 56, 797 |
| XspI | CTAG | 3 cut(s) | 816, 839, 1246 |
| ZrmI | AGTACT | 1 cut(s) | 1104 |
| Zsp2I | ATGCAT | 1 cut(s) | 900 |