Rw1G034660

disease resistance

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr1
Physical Location & Seq
Forward (+)
62587284 .. 62591456
4173 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw1G034660.1

Sequence Viewer

Length: 4173 bp
ATGGGAGAGGCTGTTCTTGGGGCGTTCCTCCCGGTGCTGCTTCAGAAGTTGGCGGATCCAGAGGTCATCGAGTACTTTGGACGCGTTAAGGGGGTCGACAAAAAGGTGCTGGAGAAATGGACGAGAACGTTGACTGCAATTGAAGCGGTGCTGAGTGATGCGGAGGAGAAGCAACTAACACAAAGAACGGTGAAACTATGGCTAGATGATCTCAGAGATTTGGCTCACGATGTTCAAGACATATTGGACACATTTGATACTGAAATGCTGAAGCGAAGGATAGAAAGACAACAAGGAAGCACGAGTAATTCATGGATCAGCTACCTCTCTAAACCTAAGTTCAATTTTAGTGTGAACTCAGAAATCAAGAAGATAAGTGATCGACTAGAAAAGATAACTGCTCGAGAAAAGGAGTTTGGTTTGAAGAAACTTGGAGGGTCCAAAAAGCCATGGAAAATGCCACCCACTACTTCTCAACTAGATGCACCTGTGATCGGAAGGGATGAAGCAAAAGCGCAGATTCTTAAGGATTTGCTCTCAAAAGACAAGCATTGTAGCAGCAATTTTCAGAATTTTCATGTTGTAGCGATTGTTGGTACGGCTGGACTAGGAAAGACAACACTTGCTAAACATGTATTCAACGACGCTGCAACTGAACAGTTTTACCCAAAGGGATGGGTGTCTGTGTCCGACGACTTTGACATTGTGAGGGTGACAGCAGCAATTCTTGAATCAGTCACGTCAGCTCATGTTCAGGAATTCAAGGAGCTTAATTCAATTCAGGAGAAGTTAAGTAAGGAATTGGCTGGCAAGAAGTTTTTAATTGTTCTAGATGATGTCTGGGACACATGTAACTATGGTCAATGGACGACACTGCAGTCCTCCTTTCGTGTTGGAGCAGGTGGAAGTAAGATCATTGTGACGACACGCGATACCAATGTTGCAAAAATGATGGGAGACACTAGCCCTTATAACTTGGAGTCGATGTCAAAAGATGATTGTTGGAAAATCTTTGAGCACCATGCACTCTTAAACAACAGACCCCAAGATGCTGAGTTACTTCAGGAAAAAATTGTAGTAAAATGCAATGGATTGCCGTTGGCTGCAAGGACACTTGGTGGTCTTTTACGTTGTAAAAGAGTAATTGAATGGGAAGAAATATTAGACCACAAGATGTGGACTCTATCAGACCGCCAGACAGACATCCTTCCAGCATTAAAATTGAGCTATCATTATCTCCCTTCGAATTTGAAACAGTGTTTCTCCTACTGCGCAATACTTCCAAATGATTATGAATTTGGGAATATGCAATTGATCCTTTTGTGGATGGCAGAGGGTTTGATTCCGCAGCAACAAAATAAACAAATGGAAGATTTGGGCCGCGACTATTTTCAAGAGTTGGTGTCTAGGTCATTGTTTCAAAAGTCAAGTAAAGGAAGGACTCGATACATAATGCATGACCTCGTTACTGATTTGGCACGTTGGGCTGCAGGAGATTCATGTTCTAGATTGGAGGATATGCAGAATTATGACTCATCGCGACGTAGATTGGTTCGTCATTCGTCTTACATTCCTGGTAGGTATGATGGGATTAAAAAGTTTGGGGTCTATTCTGAAGCTATATGTTTGCGGACATTCTTACCACTTTCACTTTCAATTAATAATTATCTGGCTCAAAGGGTTACTTCTGATTTATTGCCCAAACTCCAATACTTGCGACTGCTCTCTTTGAGTGGATATAGAATAACCGAGCTGCCAAATACAATTGGTAAATTGAAGCATCTACGGTATCTTGATCTTTTTCACACTCGAATAAGAAGTTTGCCAGACTCAACAACCACTCTTTACAACTTACAAACATTGATATTGGACAAATGTGATCAGTTGGGGGCACTACCCACAGGCATGAGGAATCTAGTAAATTTGCGTCACCTCATGAATTCGTATACATCTTCATTGGAAGAAATGCCTCCTCAGCTTGGTCGATTGACTAATCTCCAAACATTGCCTAATTTTGTTATTGGCAAAGGTAGTGGATCAGGAGTAAGAGAGATTGGGTCATTGTTGCGTCTGCAAGGGAAATTGCACCTCTCAAGACTAGAGAATGTGGCTTGTGTCGAGGATGCTAGAAGTGCCAGCTTAAAGAGCAAGGAGGGGCTTGAAGCTCTGTTTCTTTCGTGGTCTTCTTCAAGTGACTCGACAGAAATTGCAAACCATGTGCTTGACATGTTACAACCTCATTCCAAACTCAAAGAGCTCACCATCCAAGGTTATGCCGGATTGAAATTTTCAACATGGATTGGAGACTCTTCATTCTCTAATATGGTGCGTGTAAGGTTAGAAGGTTGTCATCATTGTCAATTCTTGCCACCATTCGGACAGTTGCCTTCTCTCAAAGAACTCTATATACAAGAAATGGATGCAGTGGAAAGTGTTGGTATTGAGTTTTATGGAGAAGGTAACTTGCCGTTTCAAGCTTTAGAGTCCCTTGAGTTTCGGAATCTGAAAAATTGGAAGAAGTGGTCTGCTTGCCAACAAAATGAGGGGGTTGGGGTTTTCTCTTGCCTGAAAAAGCTTTCCATCAGCGACTGCCCCGAATTGGAGGGTAGTTTACCGGAGAAGCTTGATTCATTAGCACAGCTTCAGATATCTGGATGTGAGGAATTGGTGGTTTCAATATCCAATTATAAACAGCTTCATGAATCAGACATCAAAAATTGCAAGATGGTGGTTTACGACACAAGTCCAGTTCTCTTGGACTTACTAGAGAGGTTGGCATTTTCAAATGTTTCAGAGGTGAGATTCGAAAGAGAGGCATTCATGAAAAGCTTGAAAAATGTTAAAGAGTTGGAGATTACTGGTTGTGAGGAGCTGACATGTTCCTTTCAGAATGAGGATAGATTACTGCAACATTTGATTTCTCTTGGTCGTTTGTGTATTGAAGACAACTCTGCCCTTGTTGAAAAGCTAGGGAAAGAAGCAGAGCAGTTGGTGCAATTGCAAATACTGGATTGCAAGCTGGAACGTCTGCAATTAAGCAAGTGTGGAAGCCTTCTGAAGGTACCAGAAGGATTGCATCACCTTACATCTCTTCAAGAGCTTCACATAAATGGATGTTCAAGTCTAGTTTCTTTTCCGGATGTTGGTCTGCCACCTTGTCTTAAAGTCATAGACATTCAGAACTGCGATTCTCTGTTGCACTTTGCAAAATACCAGATTGCTCCAAGCCTGAGAAGAATAGGGATTCGGGGATGTGAGAAATTGAAATCATTGATAGAGAAAGAGGAGGTGGTGGTGGATGGTTCTTGTTCGTCTTATTGTCTCGAGTATTTAGAGATATGGAACTGTCCATCTCTGTTGTTTTTATTATGCAAAGGCCAATTACCCAGGGCTCTTAAACAGCTTTCGATATGGTGTTGTAGACAGCTGGAGTTAATAATAAGTGAGAGGTTCCTCGATGACACCTGTCAACTCGAAAGTATTCACATCTGGAAGTGCCCAAACCTTAAATCCTTACCTGAGGGACTGTGCCACCTCACCAATCTTCAGTCATTATATATTTGGGGTTGTCAAAGTCTGGTTTCATTGCCGAGAATGAGTGTGTGGCCAAGAGCTATGACTATCGGAGATTGTGAGAAATTGGAGGTGGCACACTTGCTGAGAGACATGATGCACACTGAGATATTGGAGATTGATTACTGTGAAGGTTTGACTACTACTTCCTTTCCCCCCAACCTAACATCACTTGAAATTTACAAGATCAAGAATTGTAAGGCGCTGATGGAATCTCAAGGGTTGCACAGACTCACCTCTTTGAGAGAATTGCGGATCTCCGGTGATGAAGATGATCGAGGTCTGGTGTCCTTTCCACCTGGTGAGAATTCGAAGGAGAAGGAGATGCTGCTCCCCAGATCTCTTGTTGAATTGAGAATTGGATTCTTCCCAAATCTAAAGAAACTGAGCAAGGGCTTTCAATTCCTCACCTCTCTTGAGAGTCTTTACATCTACAAATGTCCGAAGCTTACAACCATTCCAGAGGAGGGCCTGCCTCTTTCACTTACGACACTTTATATTGATGGGTGTTCTCCTCTACTTGAAGAGAGATGCAAAGGACGATACCGGCCCAAGATAGCACACATCCCTTGCGTCGAAATTAATGGCTCCTTGATCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

1390

Amino Acids

157.55

Weight (kDa)

6.63

Isoelectric Point (pI)

43.96

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Rx_N PF18052 10 - 99 6.4e-20 Rx N-terminal domain
NB-ARC PF00931 190 - 343 3.8e-35 NB-ARC domain
WHD_DRP PF23559 426 - 493 1.5e-24 Disease resistance protein Winged helix domain
LRR_14 PF23598 565 - 833 2.8e-24 Leucine-rich repeat region
LRR_R13L1-DRL21 PF25019 683 - 806 1.4e-36 R13L1/DRL21 LRRs
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000070)

Species Orthologous Gene IDs
fragaria_vesca FvH4_7g00360 FvH4_7g00850 FvH4_7g02400 FvH4_7g02430 FvH4_7g02450 FvH4_7g25671 FvH4_7g25680 FvH4_7g25683 FvH4_7g26980 FvH4_7g27330 FvH4_7g27355 FvH4_7g27610 FvH4_7g27642 FvH4_7g27890 FvH4_7g27891 FvH4_7g27891 FvH4_7g27891 FvH4_7g28110 FvH4_7g28390
malus_domestica MD00G1070800.v1.1 MD00G1168000.v1.1 MD00G1168300.v1.1 MD00G1168700.v1.1 MD02G1293100.v1.1 MD02G1293200.v1.1 MD02G1314300.v1.1 MD03G1009000.v1.1 MD03G1009400.v1.1 MD03G1042300.v1.1 MD03G1042400.v1.1 MD07G1033600.v1.1 MD07G1033700.v1.1 MD07G1033900.v1.1 MD11G1011400.v1.1 MD11G1011700.v1.1 MD11G1029800.v1.1 MD11G1029900.v1.1 MD11G1030300.v1.1 MD11G1030400.v1.1 MD11G1030500.v1.1 MD11G1031300.v1.1 MD11G1031600.v1.1 MD11G1032000.v1.1 MD11G1033200.v1.1 MD11G1033600.v1.1 MD11G1033800.v1.1 MD11G1033900.v1.1 MD11G1034100.v1.1 MD11G1034400.v1.1 MD11G1040600.v1.1 MD11G1041100.v1.1 MD11G1043100.v1.1 MD11G1043500.v1.1 MD11G1044500.v1.1 MD11G1045100.v1.1 MD11G1045600.v1.1
prunus_persica Prupe.2G022400_v2.0.a1 Prupe.2G022400_v2.0.a1 Prupe.2G022400_v2.0.a1 Prupe.2G022500_v2.0.a1 Prupe.2G022500_v2.0.a1 Prupe.2G022900_v2.0.a1 Prupe.2G023500_v2.0.a1 Prupe.2G023500_v2.0.a1 Prupe.2G023500_v2.0.a1 Prupe.2G023500_v2.0.a1 Prupe.2G023500_v2.0.a1 Prupe.2G023500_v2.0.a1 Prupe.2G023600_v2.0.a1 Prupe.2G028000_v2.0.a1 Prupe.2G030200_v2.0.a1 Prupe.2G067600_v2.0.a1 Prupe.8G117900_v2.0.a1
pyrus_communis pycom02g26350 pycom03g03270 pycom07g02370 pycom11g00750 pycom11g00790 pycom11g02340 pycom11g02370 pycom11g02380 pycom11g02390 pycom11g02410 pycom11g02460 pycom11g02470 pycom11g02500 pycom11g02510 pycom11g02520 pycom11g02530 pycom11g02580 pycom11g02590 pycom11g02680 pycom11g02710 pycom11g02720 pycom11g02730 pycom11g02750 pycom11g02760 pycom11g02770 pycom11g03690 pycom13g25120 pycom13g25130 pycom13g25140 pycom13g25170 pycom13g25180 pycom13g25190 pycom13g25210
rosa_chinensis RchiOBHm_Chr1g0315001 RchiOBHm_Chr1g0315411 RchiOBHm_Chr1g0317951 RchiOBHm_Chr1g0319741 RchiOBHm_Chr1g0319841 RchiOBHm_Chr1g0319911 RchiOBHm_Chr1g0319991 RchiOBHm_Chr1g0320001 RchiOBHm_Chr1g0320021 RchiOBHm_Chr1g0320081 RchiOBHm_Chr1g0320111 RchiOBHm_Chr1g0320131 RchiOBHm_Chr1g0320161 RchiOBHm_Chr1g0320171 RchiOBHm_Chr1g0320241 RchiOBHm_Chr1g0320281 RchiOBHm_Chr1g0320411 RchiOBHm_Chr1g0320461 RchiOBHm_Chr1g0320551 RchiOBHm_Chr1g0320581 RchiOBHm_Chr1g0320661 RchiOBHm_Chr1g0320891 RchiOBHm_Chr1g0320971 RchiOBHm_Chr1g0321021 RchiOBHm_Chr1g0321031 RchiOBHm_Chr1g0321091 RchiOBHm_Chr1g0321351 RchiOBHm_Chr1g0321481 RchiOBHm_Chr1g0321491 RchiOBHm_Chr1g0327521 RchiOBHm_Chr1g0328061 RchiOBHm_Chr1g0334991 RchiOBHm_Chr1g0373781 RchiOBHm_Chr1g0373891 RchiOBHm_Chr1g0374841 RchiOBHm_Chr2g0131111 RchiOBHm_Chr2g0131121 RchiOBHm_Chr4g0408901 RchiOBHm_Chr5g0041691 RchiOBHm_Chr7g0237021
rosa_laevigata RLG00000019168 RLG00000030456 RLG00000030460 RLG00000030571
rosa_multiflora Rmu_co7963468.1_g000001 Rmu_co7991248.1_g000001 Rmu_co8195256.1_g000001 Rmu_co8312199.1_g000001 Rmu_co8349215.1_g000001 Rmu_co8351041.1_g000001 Rmu_co8422719.1_g000001 Rmu_co8450711.1_g000001 Rmu_co8465555.1_g000001 Rmu_co8489965.1_g000001 Rmu_sc0000087.1_g000014 Rmu_sc0000272.1_g000015 Rmu_sc0000724.1_g000006 Rmu_sc0000724.1_g000021 Rmu_sc0000724.1_g000022 Rmu_sc0000861.1_g000024 Rmu_sc0001049.1_g000006 Rmu_sc0001049.1_g000007 Rmu_sc0001512.1_g000001 Rmu_sc0002022.1_g000004 Rmu_sc0002063.1_g000011 Rmu_sc0002131.1_g000024 Rmu_sc0002337.1_g000012 Rmu_sc0002341.1_g000005 Rmu_sc0002539.1_g000117 Rmu_sc0002745.1_g000005 Rmu_sc0002745.1_g000006 Rmu_sc0003145.1_g000002 Rmu_sc0003199.1_g000007 Rmu_sc0003270.1_g000039 Rmu_sc0003270.1_g000040 Rmu_sc0003423.1_g000001 Rmu_sc0003423.1_g000002 Rmu_sc0003629.1_g000067 Rmu_sc0004039.1_g000002 Rmu_sc0004555.1_g000001 Rmu_sc0004555.1_g000005 Rmu_sc0004555.1_g000006 Rmu_sc0004947.1_g000025 Rmu_sc0004947.1_g000026 Rmu_sc0005255.1_g000025 Rmu_sc0007977.1_g000016 Rmu_sc0008752.1_g000005 Rmu_sc0009236.1_g000004 Rmu_sc0009236.1_g000008 Rmu_sc0009236.1_g000009 Rmu_sc0009236.1_g000010 Rmu_sc0011424.1_g000036 Rmu_sc0013413.1_g000001 Rmu_sc0013735.1_g000002 Rmu_sc0015304.1_g000002 Rmu_sc0015304.1_g000003 Rmu_sc0015585.1_g000001 Rmu_sc0018410.1_g000001 Rmu_sc0022723.1_g000001 Rmu_sc0022723.1_g000002 Rmu_sc0022724.1_g000001 Rmu_sc0023430.1_g000001 Rmu_sc0026053.1_g000001 Rmu_sc0026429.1_g000002 Rmu_sc0026647.1_g000001 Rmu_sc0031359.1_g000001 Rmu_ssc0000042.1_g000040 Rmu_ssc0000081.1_g000001 Rmu_ssc0000300.1_g000011
rosa_roxburghii Rroxscaffold_160G00433620 Rroxscaffold_160G00433990 Rroxscaffold_1G00038820 Rroxscaffold_2G00113190 Rroxscaffold_4G00283240 Rroxscaffold_4G00283930 Rroxscaffold_4G00284010 Rroxscaffold_4G00322600 Rroxscaffold_4G00327710 Rroxscaffold_4G00328100 Rroxscaffold_4G00328130 Rroxscaffold_4G00331590 Rroxscaffold_5G00353280
rosa_rugosa Rorug01G0004200 Rorug01G0018800 Rorug01G0018900 Rorug01G0029900 Rorug01G0030000 Rorug01G0030000 Rorug01G0030000 Rorug01G0030200 Rorug01G0030300 Rorug01G0030800 Rorug01G0032400 Rorug01G0032900 Rorug01G0055800 Rorug01G0067600 Rorug01G0067700 Rorug01G0067800 Rorug01G0067900 Rorug01G0068000 Rorug01G0379500 Rorug01G0379600 Rorug01G0379600 Rorug01G0385200 Rorug01G0385300 Rorug02G0295100 Rorug04G0088500 Rorug04G0088600 Rorug05G0194900 Rorug07G0301400
rosa_samantha Rh1AG014800 Rh1AG015200 Rh1AG030500 Rh1AG041800 Rh1AG042300 Rh1AG042700 Rh1AG042800 Rh1AG042900 Rh1AG045000 Rh1AG085100 Rh1AG085200 Rh1AG388600 Rh1AG396700 Rh1AG396900 Rh1BG007300 Rh1BG039200 Rh1BG039600 Rh1BG042800 Rh1BG067300 Rh1BG109700 Rh1BG109900 Rh1BG354000 Rh1CG043800 Rh1CG044400 Rh1DG008600 Rh1DG022900 Rh1DG023400 Rh1DG023600 Rh1DG023900 Rh1DG024100 Rh1DG024400 Rh1DG024500 Rh1DG025500 Rh1DG025700 Rh1DG026500 Rh1DG026800 Rh1DG038900 Rh1DG048800 Rh1DG049300 Rh1DG051700 Rh1DG052000 Rh1DG146200 Rh1DG383500 Rh2BG354900 Rh2CG333600 Rh4BG149600 Rh4BG149700 Rh4CG160600
rosa_wichuraiana Rw0G001100 Rw0G001130 Rw0G001180 Rw0G012580 Rw1G003480 Rw1G003540 Rw1G003600 Rw1G003640 Rw1G003670 Rw1G003750 Rw1G003940 Rw1G006650 Rw1G034550 Rw1G034560 Rw1G034650 Rw1G034660 Rw1G035170 Rw1G035190 Rw1G037060 Rw2G028210 Rw4G012540 Rw5G026370 Rw7G037900

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 972, 2688
AarI CACCTGC 1 cut(s) 890
AasI GACNNNNNNGTC 1 cut(s) 877
Acc16I TGCGCA 1 cut(s) 1273
Acc36I ACCTGC 1 cut(s) 890
Acc65I GGTACC 1 cut(s) 3061
AccB1I GGYRCC 1 cut(s) 3061
AccI GTMKAC 3 cut(s) 96, 1946, 3421
AccII CGCG 4 cut(s) 84, 930, 1383, 1540
AccIII TCCGGA 1 cut(s) 3136
AciI CCGC 8 cut(s) 53, 146, 161, 1192, 1346, 1381, 1630, 3826
AclI AACGTT 1 cut(s) 128
AclWI GGATC 6 cut(s) 50, 63, 323, 1309, 2044, 3836
AcoI YGGCCR 1 cut(s) 3605
AcsI RAATTY 9 cut(s) 571, 758, 1246, 1295, 1921, 1939, 2285, 3750, 3880
AcuI CTGAAG 7 cut(s) 26, 290, 1046, 1635, 2627, 3077, 3530
AdeI CACNNNGTG 2 cut(s) 1118, 3875
AfaI GTAC 3 cut(s) 74, 598, 3063
AfiI CCNNNNNNNGG 7 cut(s) 494, 1979, 2375, 2599, 3058, 3143, 4040
AflII CTTAAG 1 cut(s) 524
AflIII ACRYGT 5 cut(s) 82, 631, 848, 2226, 2876
AjiI CACGTC 1 cut(s) 741
AjnI CCWGG 3 cut(s) 1573, 3386, 3871
AjuI GAANNNNNNNTTGG 4 cut(s) 399, 431, 3915, 3947
AloI GAACNNNNNNTCC 1 cut(s) 29
Alw21I GWGCWC 2 cut(s) 1020, 2259
Alw26I GTCTC 4 cut(s) 951, 2298, 3326, 3657
AlwI GGATC 6 cut(s) 50, 63, 323, 1309, 2044, 3836
AlwNI CAGNNNCTG 1 cut(s) 2589
Ama87I CYCGRG 2 cut(s) 402, 3323
Aor13HI TCCGGA 1 cut(s) 3136
AoxI GGCC 5 cut(s) 1378, 3376, 3605, 4042, 4121
ApeKI GCWGC 9 cut(s) 37, 558, 647, 719, 1103, 1348, 1487, 1753, 3901
ApoI RAATTY 9 cut(s) 571, 758, 1246, 1295, 1921, 1939, 2285, 3750, 3880
AseI ATTAAT 2 cut(s) 1659, 4155
Asp700I GAANNNNTTC 1 cut(s) 3480
Asp718I GGTACC 1 cut(s) 3061
AspLEI GCGC 3 cut(s) 517, 1274, 3778
AspS9I GGNCC 4 cut(s) 438, 1378, 4042, 4122
AsuC2I CCSGG 1 cut(s) 32
AsuII TTCGAA 3 cut(s) 1244, 2805, 3884
AvaI CYCGRG 2 cut(s) 402, 3323
AvaII GGWCC 1 cut(s) 438
AxyI CCTNAGG 1 cut(s) 3519
BaeGI GKGCMC 2 cut(s) 1894, 3500
BaeI ACNNNNGTAYC 2 cut(s) 924, 957
BalI TGGCCA 1 cut(s) 3607
BamHI GGATCC 1 cut(s) 55
BanI GGYRCC 1 cut(s) 3061
BanII GRGCYC 2 cut(s) 2259, 3394
BauI CACGAG 1 cut(s) 301
BbsI GAAGAC 2 cut(s) 2175, 2949
Bbv12I GWGCWC 2 cut(s) 1020, 2259
BbvCI CCTCAGC 1 cut(s) 1974
BbvI GCAGC 9 cut(s) 24, 570, 634, 731, 1090, 1360, 1474, 1740, 3888
BceAI ACGGC 3 cut(s) 615, 1081, 2452
BciT130I CCWGG 3 cut(s) 1575, 3388, 3873
BclI TGATCA 1 cut(s) 1879
BcnI CCSGG 1 cut(s) 32
BcoDI GTCTC 4 cut(s) 951, 2298, 3326, 3657
BfmI CTRYAG 2 cut(s) 875, 1488
BfoI RGCGCY 1 cut(s) 3779
BfrI CTTAAG 1 cut(s) 524
BfuAI ACCTGC 1 cut(s) 890
BglII AGATCT 1 cut(s) 3911
BmcAI AGTACT 1 cut(s) 74
Bme1390I CCNGG 4 cut(s) 32, 1575, 3388, 3873
Bme18I GGWCC 1 cut(s) 438
BmeT110I CYCGRG 2 cut(s) 402, 3323
BmgBI CACGTC 1 cut(s) 741
BmgT120I GGNCC 4 cut(s) 438, 1378, 4042, 4122
BmiI GGNNCC 5 cut(s) 57, 439, 3063, 3452, 4162
BmrFI CCNGG 4 cut(s) 32, 1575, 3388, 3873
BoxI GACNNNNGTC 2 cut(s) 2742, 3465
BpiI GAAGAC 2 cut(s) 2175, 2949
BpmI CTGGAG 2 cut(s) 131, 3449
Bpu10I CCTNAGC 1 cut(s) 1974
Bpu14I TTCGAA 3 cut(s) 1244, 2805, 3884
BpuEI CTTGAG 4 cut(s) 2077, 2510, 3774, 4010
BpuMI CCSGG 1 cut(s) 32
BsaJI CCNNGG 4 cut(s) 449, 2266, 3386, 3387
BsaWI WCCGGW 3 cut(s) 2614, 3136, 3833
BsaXI ACNNNNNCTCC 3 cut(s) 27, 971, 1001
Bsc4I CCNNNNNNNGG 7 cut(s) 494, 1979, 2375, 2599, 3058, 3143, 4040
Bse118I RCCGGY 1 cut(s) 4119
Bse1I ACTGG 3 cut(s) 2747, 2863, 3012
Bse21I CCTNAGG 1 cut(s) 3519
Bse3DI GCAATG 3 cut(s) 1093, 2003, 3584
BseAI TCCGGA 1 cut(s) 3136
BseBI CCWGG 3 cut(s) 1575, 3388, 3873
BseDI CCNNGG 4 cut(s) 449, 2266, 3386, 3387
BseLI CCNNNNNNNGG 7 cut(s) 494, 1979, 2375, 2599, 3058, 3143, 4040
BseMI GCAATG 3 cut(s) 1093, 2003, 3584
BseNI ACTGG 3 cut(s) 2747, 2863, 3012
BseRI GAGGAG 6 cut(s) 179, 1962, 2882, 3299, 4052, 4077
BseSI GKGCMC 2 cut(s) 1894, 3500
BseXI GCAGC 9 cut(s) 24, 570, 634, 731, 1090, 1360, 1474, 1740, 3888
Bsh1236I CGCG 4 cut(s) 84, 930, 1383, 1540
BshFI GGCC 5 cut(s) 1380, 3378, 3607, 4044, 4123
BshNI GGYRCC 1 cut(s) 3061
BsiHKAI GWGCWC 2 cut(s) 1020, 2259
BsiHKCI CYCGRG 2 cut(s) 402, 3323
BsiSI CCGG 6 cut(s) 32, 2277, 2615, 3137, 3834, 4120
BslFI GGGAC 3 cut(s) 857, 2470, 3537
BslI CCNNNNNNNGG 7 cut(s) 494, 1979, 2375, 2599, 3058, 3143, 4040
BsmAI GTCTC 4 cut(s) 951, 2298, 3326, 3657
BsmFI GGGAC 3 cut(s) 857, 2470, 3537
BsmI GAATGC 1 cut(s) 2816
BsnI GGCC 5 cut(s) 1380, 3378, 3607, 4044, 4123
BsoBI CYCGRG 2 cut(s) 402, 3323
Bsp119I TTCGAA 3 cut(s) 1244, 2805, 3884
Bsp1286I GDGCHC 5 cut(s) 1020, 1894, 2259, 3394, 3500
Bsp13I TCCGGA 1 cut(s) 3136
Bsp19I CCATGG 1 cut(s) 449
Bsp68I TCGCGA 1 cut(s) 1540
BspACI CCGC 8 cut(s) 53, 146, 161, 1192, 1346, 1381, 1630, 3826
BspANI GGCC 5 cut(s) 1380, 3378, 3607, 4044, 4123
BspEI TCCGGA 1 cut(s) 3136
BspFNI CGCG 4 cut(s) 84, 930, 1383, 1540
BspHI TCATGA 3 cut(s) 1935, 2698, 2820
BspLI GGNNCC 5 cut(s) 57, 439, 3063, 3452, 4162
BspMAI CTGCAG 2 cut(s) 879, 1492
BspMI ACCTGC 1 cut(s) 890
BspPI GGATC 6 cut(s) 50, 63, 323, 1309, 2044, 3836
BspT104I TTCGAA 3 cut(s) 1244, 2805, 3884
BspT107I GGYRCC 1 cut(s) 3061
BspTI CTTAAG 1 cut(s) 524
BsrDI GCAATG 3 cut(s) 1093, 2003, 3584
BsrFI RCCGGY 1 cut(s) 4119
BsrI ACTGG 3 cut(s) 2747, 2863, 3012
BssAI RCCGGY 1 cut(s) 4119
BssECI CCNNGG 4 cut(s) 449, 2266, 3386, 3387
BssNAI GTATAC 1 cut(s) 1947
BssSI CACGAG 1 cut(s) 301
BssT1I CCWWGG 2 cut(s) 449, 2266
Bst1107I GTATAC 1 cut(s) 1947
Bst2BI CACGAG 1 cut(s) 301
Bst2UI CCWGG 3 cut(s) 1575, 3388, 3873
Bst4CI ACNGT 8 cut(s) 190, 660, 1257, 1788, 2382, 3347, 3528, 3701
Bst6I CTCTTC 3 cut(s) 2314, 3096, 4092
BstAFI CTTAAG 1 cut(s) 524
BstAPI GCANNNNNTGC 1 cut(s) 2992
BstBI TTCGAA 3 cut(s) 1244, 2805, 3884
BstC8I GCNNGC 5 cut(s) 808, 2137, 2530, 3017, 4046
BstDSI CCRYGG 1 cut(s) 449
BstENI CCTNNNNNAGG 1 cut(s) 3056
BstFNI CGCG 4 cut(s) 84, 930, 1383, 1540
BstH2I RGCGCY 1 cut(s) 3779
BstHHI GCGC 3 cut(s) 517, 1274, 3778
BstMAI GTCTC 4 cut(s) 951, 2298, 3326, 3657
BstMWI GCNNNNNNNGC 6 cut(s) 143, 1484, 1975, 2132, 2145, 2992
BstNI CCWGG 3 cut(s) 1575, 3388, 3873
BstNSI RCATGY 4 cut(s) 635, 852, 2230, 2880
BstPAI GACNNNNGTC 2 cut(s) 2742, 3465
BstSCI CCNGG 4 cut(s) 30, 1573, 3386, 3871
BstSFI CTRYAG 2 cut(s) 875, 1488
BstSLI GKGCMC 2 cut(s) 1894, 3500
BstUI CGCG 4 cut(s) 84, 930, 1383, 1540
BstV1I GCAGC 9 cut(s) 24, 570, 634, 731, 1090, 1360, 1474, 1740, 3888
BstV2I GAAGAC 2 cut(s) 2175, 2949
BstX2I RGATCY 3 cut(s) 55, 3828, 3911
BstXI CCANNNNNNTGG 1 cut(s) 675
BstYI RGATCY 3 cut(s) 55, 3828, 3911
BstZ17I GTATAC 1 cut(s) 1947
Bsu36I CCTNAGG 1 cut(s) 3519
BsuRI GGCC 5 cut(s) 1380, 3378, 3607, 4044, 4123
BtgI CCRYGG 1 cut(s) 449
BtgZI GCGATG 1 cut(s) 1521
BtrI CACGTC 1 cut(s) 741
BtsI GCAGTG 2 cut(s) 872, 2430
BtsIMutI CAGTG 4 cut(s) 872, 1262, 2430, 3675
BtuMI TCGCGA 1 cut(s) 1540
BveI ACCTGC 1 cut(s) 890
Cac8I GCNNGC 5 cut(s) 808, 2137, 2530, 3017, 4046
CaiI CAGNNNCTG 1 cut(s) 2589
CciI TCATGA 3 cut(s) 1935, 2698, 2820
CfoI GCGC 3 cut(s) 517, 1274, 3778
Cfr10I RCCGGY 1 cut(s) 4119
Cfr13I GGNCC 4 cut(s) 438, 1378, 4042, 4122
CseI GACGC 5 cut(s) 90, 653, 1916, 2057, 4135
CsiI ACCWGGT 1 cut(s) 3871
Csp6I GTAC 3 cut(s) 73, 597, 3062
CspCI CAANNNNNGTGG 2 cut(s) 2014, 2049
CviQI GTAC 3 cut(s) 73, 597, 3062
DraIII CACNNNGTG 2 cut(s) 1118, 3875
DrdI GACNNNNNNGTC 1 cut(s) 877
DseDI GACNNNNNNGTC 1 cut(s) 877
EaeI YGGCCR 1 cut(s) 3605
Eam1104I CTCTTC 3 cut(s) 2314, 3096, 4092
EarI CTCTTC 3 cut(s) 2314, 3096, 4092
EciI GGCGGA 1 cut(s) 68
Ecl136II GAGCTC 1 cut(s) 2257
Eco130I CCWWGG 2 cut(s) 449, 2266
Eco24I GRGCYC 2 cut(s) 2259, 3394
Eco32I GATATC 1 cut(s) 2649
Eco47I GGWCC 1 cut(s) 438
Eco53kI GAGCTC 1 cut(s) 2257
Eco57I CTGAAG 7 cut(s) 26, 290, 1046, 1635, 2627, 3077, 3530
Eco81I CCTNAGG 1 cut(s) 3519
Eco88I CYCGRG 2 cut(s) 402, 3323
EcoICRI GAGCTC 1 cut(s) 2257
EcoNI CCTNNNNNAGG 1 cut(s) 3056
EcoO109I RGGNCCY 1 cut(s) 4042
EcoRI GAATTC 3 cut(s) 758, 1939, 3880
EcoRII CCWGG 3 cut(s) 1573, 3386, 3871
EcoRV GATATC 1 cut(s) 2649
EcoT14I CCWWGG 2 cut(s) 449, 2266
EcoT22I ATGCAT 1 cut(s) 1458
EcoT38I GRGCYC 2 cut(s) 2259, 3394
ErhI CCWWGG 2 cut(s) 449, 2266
FalI AAGNNNNNCTT 2 cut(s) 1669, 1701
FaqI GGGAC 3 cut(s) 857, 2470, 3537
FbaI TGATCA 1 cut(s) 1879
FblI GTMKAC 3 cut(s) 96, 1946, 3421
FriOI GRGCYC 2 cut(s) 2259, 3394
FspI TGCGCA 1 cut(s) 1273
GlaI GCGC 3 cut(s) 516, 1273, 3777
GsuI CTGGAG 2 cut(s) 131, 3449
HaeII RGCGCY 1 cut(s) 3779
HaeIII GGCC 5 cut(s) 1380, 3378, 3607, 4044, 4123
HapII CCGG 6 cut(s) 32, 2277, 2615, 3137, 3834, 4120
HgaI GACGC 5 cut(s) 90, 653, 1916, 2057, 4135
HhaI GCGC 3 cut(s) 517, 1274, 3778
Hin6I GCGC 3 cut(s) 515, 1272, 3776
HinP1I GCGC 3 cut(s) 515, 1272, 3776
HincII GTYRAC 3 cut(s) 97, 132, 3470
HindII GTYRAC 3 cut(s) 97, 132, 3470
HindIII AAGCTT 5 cut(s) 2475, 2573, 2621, 2827, 4019
HpaII CCGG 6 cut(s) 32, 2277, 2615, 3137, 3834, 4120
Hpy166II GTNNAC 9 cut(s) 97, 132, 355, 1179, 1947, 2612, 2734, 3422, 3470
Hpy8I GTNNAC 9 cut(s) 97, 132, 355, 1179, 1947, 2612, 2734, 3422, 3470
Hpy99I CGWCG 4 cut(s) 647, 695, 1545, 4151
HpyCH4III ACNGT 8 cut(s) 190, 660, 1257, 1788, 2382, 3347, 3528, 3701
HpyCH4IV ACGT 6 cut(s) 128, 740, 1129, 1480, 1543, 3025
HpyF10VI GCNNNNNNNGC 6 cut(s) 143, 1484, 1975, 2132, 2145, 2992
HpySE526I ACGT 6 cut(s) 128, 740, 1129, 1480, 1543, 3025
HspAI GCGC 3 cut(s) 515, 1272, 3776
Kpn2I TCCGGA 1 cut(s) 3136
KpnI GGTACC 1 cut(s) 3065
Ksp22I TGATCA 1 cut(s) 1879
LmnI GCTCC 6 cut(s) 766, 896, 2869, 3226, 3909, 4166
Lsp1109I GCAGC 9 cut(s) 24, 570, 634, 731, 1090, 1360, 1474, 1740, 3888
MabI ACCWGGT 1 cut(s) 3871
MaeII ACGT 6 cut(s) 128, 740, 1129, 1480, 1543, 3025
MfeI CAATTG 4 cut(s) 138, 1310, 1764, 2996
MflI RGATCY 3 cut(s) 55, 3828, 3911
MhlI GDGCHC 5 cut(s) 1020, 1894, 2259, 3394, 3500
MlsI TGGCCA 1 cut(s) 3607
MluI ACGCGT 1 cut(s) 82
MluNI TGGCCA 1 cut(s) 3607
MmeI TCCRAC 4 cut(s) 714, 874, 983, 2829
Mox20I TGGCCA 1 cut(s) 3607
Mph1103I ATGCAT 1 cut(s) 1458
MroI TCCGGA 1 cut(s) 3136
MroXI GAANNNNTTC 1 cut(s) 3480
MscI TGGCCA 1 cut(s) 3607
MslI CAYNNNNRTG 2 cut(s) 1904, 3108
Msp20I TGGCCA 1 cut(s) 3607
MspA1I CMGCKG 1 cut(s) 3427
MspCI CTTAAG 1 cut(s) 524
MspI CCGG 6 cut(s) 32, 2277, 2615, 3137, 3834, 4120
MspR9I CCNGG 4 cut(s) 32, 1575, 3388, 3873
MunI CAATTG 4 cut(s) 138, 1310, 1764, 2996
Mva1269I GAATGC 1 cut(s) 2816
MvaI CCWGG 3 cut(s) 1575, 3388, 3873
MvnI CGCG 4 cut(s) 84, 930, 1383, 1540
MwoI GCNNNNNNNGC 6 cut(s) 143, 1484, 1975, 2132, 2145, 2992
NciI CCSGG 1 cut(s) 32
NcoI CCATGG 1 cut(s) 449
NlaIV GGNNCC 5 cut(s) 57, 439, 3063, 3452, 4162
NmeAIII GCCGAG 1 cut(s) 3615
NmuCI GTSAC 5 cut(s) 712, 736, 919, 1928, 2192
NruI TCGCGA 1 cut(s) 1540
NsbI TGCGCA 1 cut(s) 1273
NsiI ATGCAT 1 cut(s) 1458
NspI RCATGY 4 cut(s) 635, 852, 2230, 2880
NspV TTCGAA 3 cut(s) 1244, 2805, 3884
PaeR7I CTCGAG 2 cut(s) 402, 3323
PagI TCATGA 3 cut(s) 1935, 2698, 2820
PaqCI CACCTGC 1 cut(s) 890
PasI CCCWGGG 1 cut(s) 3387
PciI ACATGT 4 cut(s) 631, 848, 2226, 2876
PctI GAATGC 1 cut(s) 2816
PdmI GAANNNNTTC 1 cut(s) 3480
PscI ACATGT 4 cut(s) 631, 848, 2226, 2876
PshAI GACNNNNGTC 2 cut(s) 2742, 3465
PshBI ATTAAT 2 cut(s) 1659, 4155
PsiI TTATAA 2 cut(s) 972, 2688
Psp124BI GAGCTC 1 cut(s) 2259
Psp1406I AACGTT 1 cut(s) 128
Psp6I CCWGG 3 cut(s) 1573, 3386, 3871
PspGI CCWGG 3 cut(s) 1573, 3386, 3871
PspN4I GGNNCC 5 cut(s) 57, 439, 3063, 3452, 4162
PspPI GGNCC 4 cut(s) 438, 1378, 4042, 4122
PsrI GAACNNNNNNTAC 2 cut(s) 2391, 2423
PstI CTGCAG 2 cut(s) 879, 1492
PstNI CAGNNNCTG 1 cut(s) 2589
PsuI RGATCY 3 cut(s) 55, 3828, 3911
PvuII CAGCTG 1 cut(s) 3427
RruI TCGCGA 1 cut(s) 1540
RsaI GTAC 3 cut(s) 74, 598, 3063
RsaNI GTAC 3 cut(s) 73, 597, 3062
RseI CAYNNNNRTG 2 cut(s) 1904, 3108
SacI GAGCTC 1 cut(s) 2259
SalI GTCGAC 1 cut(s) 95
Sau96I GGNCC 4 cut(s) 438, 1378, 4042, 4122
ScaI AGTACT 1 cut(s) 74
ScrFI CCNGG 4 cut(s) 32, 1575, 3388, 3873
SduI GDGCHC 5 cut(s) 1020, 1894, 2259, 3394, 3500
SexAI ACCWGGT 1 cut(s) 3871
SfcI CTRYAG 2 cut(s) 875, 1488
Sfr274I CTCGAG 2 cut(s) 402, 3323
SfuI TTCGAA 3 cut(s) 1244, 2805, 3884
SinI GGWCC 1 cut(s) 438
SlaI CTCGAG 2 cut(s) 402, 3323
SmiMI CAYNNNNRTG 2 cut(s) 1904, 3108
SmlI CTYRAG 7 cut(s) 402, 524, 2092, 2489, 3323, 3789, 3989
SmoI CTYRAG 7 cut(s) 402, 524, 2092, 2489, 3323, 3789, 3989
SsiI CCGC 8 cut(s) 53, 146, 161, 1192, 1346, 1381, 1630, 3826
SspI AATATT 1 cut(s) 1161
SstI GAGCTC 1 cut(s) 2259
StyD4I CCNGG 4 cut(s) 30, 1573, 3386, 3871
StyI CCWWGG 2 cut(s) 449, 2266
TaaI ACNGT 8 cut(s) 190, 660, 1257, 1788, 2382, 3347, 3528, 3701
TaiI ACGT 6 cut(s) 131, 743, 1132, 1483, 1546, 3028
TatI WGTACW 1 cut(s) 72
TauI GCSGC 1 cut(s) 1383
TscAI CASTG 4 cut(s) 879, 1262, 2430, 3682
TseFI GTSAC 5 cut(s) 712, 736, 919, 1928, 2192
TseI GCWGC 9 cut(s) 37, 558, 647, 719, 1103, 1348, 1487, 1753, 3901
Tsp45I GTSAC 5 cut(s) 712, 736, 919, 1928, 2192
TspRI CASTG 4 cut(s) 879, 1262, 2430, 3682
Vha464I CTTAAG 1 cut(s) 524
VpaK11BI GGWCC 1 cut(s) 438
VspI ATTAAT 2 cut(s) 1659, 4155
XagI CCTNNNNNAGG 1 cut(s) 3056
XapI RAATTY 9 cut(s) 571, 758, 1246, 1295, 1921, 1939, 2285, 3750, 3880
XbaI TCTAGA 2 cut(s) 829, 1505
XceI RCATGY 4 cut(s) 635, 852, 2230, 2880
XhoI CTCGAG 2 cut(s) 402, 3323
XmiI GTMKAC 3 cut(s) 96, 1946, 3421
XmnI GAANNNNTTC 1 cut(s) 3480
ZrmI AGTACT 1 cut(s) 74
Zsp2I ATGCAT 1 cut(s) 1458
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.