MD07G1033600.v1.1

disease resistance

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr07
Physical Location & Seq
Reverse (-)
2755208 .. 2756055
848 bp
Loading structure...
UTR
Exon/CDS
Intron
MD07G1033600.v1.1.491

Sequence Viewer

Length: 666 bp
ATGTCACAGCCACATGGAAATCTAGAGGAGCTCACCATCAAGGGTTATGGTGGTATGAAATTTTCAACATGGGTTGGTGATCCCTTATTCTCTAACACGGTGCTTGTAAGGTTAGAGAATTGTAAGAATTGTGGATTCTTGCCACCACTTGGGCAATTGCTTTTTCTCAAGGAACTTTATGTAAGTGGAATGCCAGGAGTGGAAAGTGTGGGACATGAGTTTTATGGAAATGGTAGCTTTTCGTTTCCACGGTTGGAGACTCTTGAGTTTGAGGATATGCAACGATGGAAGGACTGGTTTCCTTGCCAAGGAGATCAAGGAATTGAAGTGTTTTCTAGCTTGAAAAGGCTCTCCATCAATAGGTGTCTCAAATTGGAGGGTAGCTTACCTGAAAACATTGGTTCAATAGAAAAGCTTGAGATTATTCAGTGTGACAAATTGGTGGCTTCAATTGCAGGCTACAAACAACTTTCTACGTTACGTGTTCAGGAGTGTAAAGGAGTAGTGTGTGGAATTAGGGTTGACTTGGAACAGCTCAAGGCTATTACTCTTGCATATGTTCCAGAGTTCAGATTTCAAACTAAGGGATTCATGACAGGATTAAGGAAGGTTGAGAAGTTGACCATTGCTGAATGTAATGACCCAGAAGTCGAGTGCCATATCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

222

Amino Acids

24.89

Weight (kDa)

5.53

Isoelectric Point (pI)

41.04

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_R13L1-DRL21 PF25019 3 - 64 8.8e-16 R13L1/DRL21 LRRs
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000070)

Species Orthologous Gene IDs
fragaria_vesca FvH4_7g00360 FvH4_7g00850 FvH4_7g02400 FvH4_7g02430 FvH4_7g02450 FvH4_7g25671 FvH4_7g25680 FvH4_7g25683 FvH4_7g26980 FvH4_7g27330 FvH4_7g27355 FvH4_7g27610 FvH4_7g27642 FvH4_7g27890 FvH4_7g27891 FvH4_7g27891 FvH4_7g27891 FvH4_7g28110 FvH4_7g28390
malus_domestica MD00G1070800.v1.1 MD00G1168000.v1.1 MD00G1168300.v1.1 MD00G1168700.v1.1 MD02G1293100.v1.1 MD02G1293200.v1.1 MD02G1314300.v1.1 MD03G1009000.v1.1 MD03G1009400.v1.1 MD03G1042300.v1.1 MD03G1042400.v1.1 MD07G1033600.v1.1 MD07G1033700.v1.1 MD07G1033900.v1.1 MD11G1011400.v1.1 MD11G1011700.v1.1 MD11G1029800.v1.1 MD11G1029900.v1.1 MD11G1030300.v1.1 MD11G1030400.v1.1 MD11G1030500.v1.1 MD11G1031300.v1.1 MD11G1031600.v1.1 MD11G1032000.v1.1 MD11G1033200.v1.1 MD11G1033600.v1.1 MD11G1033800.v1.1 MD11G1033900.v1.1 MD11G1034100.v1.1 MD11G1034400.v1.1 MD11G1040600.v1.1 MD11G1041100.v1.1 MD11G1043100.v1.1 MD11G1043500.v1.1 MD11G1044500.v1.1 MD11G1045100.v1.1 MD11G1045600.v1.1
prunus_persica Prupe.2G022400_v2.0.a1 Prupe.2G022400_v2.0.a1 Prupe.2G022400_v2.0.a1 Prupe.2G022500_v2.0.a1 Prupe.2G022500_v2.0.a1 Prupe.2G022900_v2.0.a1 Prupe.2G023500_v2.0.a1 Prupe.2G023500_v2.0.a1 Prupe.2G023500_v2.0.a1 Prupe.2G023500_v2.0.a1 Prupe.2G023500_v2.0.a1 Prupe.2G023500_v2.0.a1 Prupe.2G023600_v2.0.a1 Prupe.2G028000_v2.0.a1 Prupe.2G030200_v2.0.a1 Prupe.2G067600_v2.0.a1 Prupe.8G117900_v2.0.a1
pyrus_communis pycom02g26350 pycom03g03270 pycom07g02370 pycom11g00750 pycom11g00790 pycom11g02340 pycom11g02370 pycom11g02380 pycom11g02390 pycom11g02410 pycom11g02460 pycom11g02470 pycom11g02500 pycom11g02510 pycom11g02520 pycom11g02530 pycom11g02580 pycom11g02590 pycom11g02680 pycom11g02710 pycom11g02720 pycom11g02730 pycom11g02750 pycom11g02760 pycom11g02770 pycom11g03690 pycom13g25120 pycom13g25130 pycom13g25140 pycom13g25170 pycom13g25180 pycom13g25190 pycom13g25210
rosa_chinensis RchiOBHm_Chr1g0315001 RchiOBHm_Chr1g0315411 RchiOBHm_Chr1g0317951 RchiOBHm_Chr1g0319741 RchiOBHm_Chr1g0319841 RchiOBHm_Chr1g0319911 RchiOBHm_Chr1g0319991 RchiOBHm_Chr1g0320001 RchiOBHm_Chr1g0320021 RchiOBHm_Chr1g0320081 RchiOBHm_Chr1g0320111 RchiOBHm_Chr1g0320131 RchiOBHm_Chr1g0320161 RchiOBHm_Chr1g0320171 RchiOBHm_Chr1g0320241 RchiOBHm_Chr1g0320281 RchiOBHm_Chr1g0320411 RchiOBHm_Chr1g0320461 RchiOBHm_Chr1g0320551 RchiOBHm_Chr1g0320581 RchiOBHm_Chr1g0320661 RchiOBHm_Chr1g0320891 RchiOBHm_Chr1g0320971 RchiOBHm_Chr1g0321021 RchiOBHm_Chr1g0321031 RchiOBHm_Chr1g0321091 RchiOBHm_Chr1g0321351 RchiOBHm_Chr1g0321481 RchiOBHm_Chr1g0321491 RchiOBHm_Chr1g0327521 RchiOBHm_Chr1g0328061 RchiOBHm_Chr1g0334991 RchiOBHm_Chr1g0373781 RchiOBHm_Chr1g0373891 RchiOBHm_Chr1g0374841 RchiOBHm_Chr2g0131111 RchiOBHm_Chr2g0131121 RchiOBHm_Chr4g0408901 RchiOBHm_Chr5g0041691 RchiOBHm_Chr7g0237021
rosa_laevigata RLG00000019168 RLG00000030456 RLG00000030460 RLG00000030571
rosa_multiflora Rmu_co7963468.1_g000001 Rmu_co7991248.1_g000001 Rmu_co8195256.1_g000001 Rmu_co8312199.1_g000001 Rmu_co8349215.1_g000001 Rmu_co8351041.1_g000001 Rmu_co8422719.1_g000001 Rmu_co8450711.1_g000001 Rmu_co8465555.1_g000001 Rmu_co8489965.1_g000001 Rmu_sc0000087.1_g000014 Rmu_sc0000272.1_g000015 Rmu_sc0000724.1_g000006 Rmu_sc0000724.1_g000021 Rmu_sc0000724.1_g000022 Rmu_sc0000861.1_g000024 Rmu_sc0001049.1_g000006 Rmu_sc0001049.1_g000007 Rmu_sc0001512.1_g000001 Rmu_sc0002022.1_g000004 Rmu_sc0002063.1_g000011 Rmu_sc0002131.1_g000024 Rmu_sc0002337.1_g000012 Rmu_sc0002341.1_g000005 Rmu_sc0002539.1_g000117 Rmu_sc0002745.1_g000005 Rmu_sc0002745.1_g000006 Rmu_sc0003145.1_g000002 Rmu_sc0003199.1_g000007 Rmu_sc0003270.1_g000039 Rmu_sc0003270.1_g000040 Rmu_sc0003423.1_g000001 Rmu_sc0003423.1_g000002 Rmu_sc0003629.1_g000067 Rmu_sc0004039.1_g000002 Rmu_sc0004555.1_g000001 Rmu_sc0004555.1_g000005 Rmu_sc0004555.1_g000006 Rmu_sc0004947.1_g000025 Rmu_sc0004947.1_g000026 Rmu_sc0005255.1_g000025 Rmu_sc0007977.1_g000016 Rmu_sc0008752.1_g000005 Rmu_sc0009236.1_g000004 Rmu_sc0009236.1_g000008 Rmu_sc0009236.1_g000009 Rmu_sc0009236.1_g000010 Rmu_sc0011424.1_g000036 Rmu_sc0013413.1_g000001 Rmu_sc0013735.1_g000002 Rmu_sc0015304.1_g000002 Rmu_sc0015304.1_g000003 Rmu_sc0015585.1_g000001 Rmu_sc0018410.1_g000001 Rmu_sc0022723.1_g000001 Rmu_sc0022723.1_g000002 Rmu_sc0022724.1_g000001 Rmu_sc0023430.1_g000001 Rmu_sc0026053.1_g000001 Rmu_sc0026429.1_g000002 Rmu_sc0026647.1_g000001 Rmu_sc0031359.1_g000001 Rmu_ssc0000042.1_g000040 Rmu_ssc0000081.1_g000001 Rmu_ssc0000300.1_g000011
rosa_roxburghii Rroxscaffold_160G00433620 Rroxscaffold_160G00433990 Rroxscaffold_1G00038820 Rroxscaffold_2G00113190 Rroxscaffold_4G00283240 Rroxscaffold_4G00283930 Rroxscaffold_4G00284010 Rroxscaffold_4G00322600 Rroxscaffold_4G00327710 Rroxscaffold_4G00328100 Rroxscaffold_4G00328130 Rroxscaffold_4G00331590 Rroxscaffold_5G00353280
rosa_rugosa Rorug01G0004200 Rorug01G0018800 Rorug01G0018900 Rorug01G0029900 Rorug01G0030000 Rorug01G0030000 Rorug01G0030000 Rorug01G0030200 Rorug01G0030300 Rorug01G0030800 Rorug01G0032400 Rorug01G0032900 Rorug01G0055800 Rorug01G0067600 Rorug01G0067700 Rorug01G0067800 Rorug01G0067900 Rorug01G0068000 Rorug01G0379500 Rorug01G0379600 Rorug01G0379600 Rorug01G0385200 Rorug01G0385300 Rorug02G0295100 Rorug04G0088500 Rorug04G0088600 Rorug05G0194900 Rorug07G0301400
rosa_samantha Rh1AG014800 Rh1AG015200 Rh1AG030500 Rh1AG041800 Rh1AG042300 Rh1AG042700 Rh1AG042800 Rh1AG042900 Rh1AG045000 Rh1AG085100 Rh1AG085200 Rh1AG388600 Rh1AG396700 Rh1AG396900 Rh1BG007300 Rh1BG039200 Rh1BG039600 Rh1BG042800 Rh1BG067300 Rh1BG109700 Rh1BG109900 Rh1BG354000 Rh1CG043800 Rh1CG044400 Rh1DG008600 Rh1DG022900 Rh1DG023400 Rh1DG023600 Rh1DG023900 Rh1DG024100 Rh1DG024400 Rh1DG024500 Rh1DG025500 Rh1DG025700 Rh1DG026500 Rh1DG026800 Rh1DG038900 Rh1DG048800 Rh1DG049300 Rh1DG051700 Rh1DG052000 Rh1DG146200 Rh1DG383500 Rh2BG354900 Rh2CG333600 Rh4BG149600 Rh4BG149700 Rh4CG160600
rosa_wichuraiana Rw0G001100 Rw0G001130 Rw0G001180 Rw0G012580 Rw1G003480 Rw1G003540 Rw1G003600 Rw1G003640 Rw1G003670 Rw1G003750 Rw1G003940 Rw1G006650 Rw1G034550 Rw1G034560 Rw1G034650 Rw1G034660 Rw1G035170 Rw1G035190 Rw1G037060 Rw2G028210 Rw4G012540 Rw5G026370 Rw7G037900

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 647
AccB7I CCANNNNNTGG 1 cut(s) 149
AclWI GGATC 1 cut(s) 74
AcsI RAATTY 1 cut(s) 59
AfiI CCNNNNNNNGG 3 cut(s) 149, 308, 360
AflIII ACRYGT 1 cut(s) 481
AgsI TTSAA 6 cut(s) 66, 326, 343, 405, 450, 578
AjnI CCWGG 1 cut(s) 193
AluBI AGCT 6 cut(s) 31, 237, 339, 384, 415, 535
AluI AGCT 6 cut(s) 31, 237, 339, 384, 415, 535
Alw21I GWGCWC 1 cut(s) 33
Alw26I GTCTC 2 cut(s) 251, 371
AlwI GGATC 1 cut(s) 74
ApoI RAATTY 1 cut(s) 59
AsuHPI GGTGA 2 cut(s) 25, 89
BanII GRGCYC 1 cut(s) 33
Bbv12I GWGCWC 1 cut(s) 33
BccI CCATC 3 cut(s) 44, 279, 362
BciT130I CCWGG 1 cut(s) 195
BcoDI GTCTC 2 cut(s) 251, 371
BfaI CTAG 2 cut(s) 23, 336
Bme1390I CCNGG 1 cut(s) 195
BmrFI CCNGG 1 cut(s) 195
BpuEI CTTGAG 4 cut(s) 152, 284, 437, 521
BsaAI YACGTR 1 cut(s) 482
BsaJI CCNNGG 2 cut(s) 248, 307
Bsc4I CCNNNNNNNGG 3 cut(s) 149, 308, 360
Bse1I ACTGG 1 cut(s) 299
Bse3DI GCAATG 1 cut(s) 624
BseBI CCWGG 1 cut(s) 195
BseDI CCNNGG 2 cut(s) 248, 307
BseLI CCNNNNNNNGG 3 cut(s) 149, 308, 360
BseMI GCAATG 1 cut(s) 624
BseNI ACTGG 1 cut(s) 299
BseRI GAGGAG 1 cut(s) 41
BsiHKAI GWGCWC 1 cut(s) 33
BslFI GGGAC 1 cut(s) 225
BslI CCNNNNNNNGG 3 cut(s) 149, 308, 360
BsmAI GTCTC 2 cut(s) 251, 371
BsmFI GGGAC 1 cut(s) 225
BsmI GAATGC 1 cut(s) 195
Bsp1286I GDGCHC 1 cut(s) 33
Bsp143I GATC 2 cut(s) 79, 313
BspHI TCATGA 1 cut(s) 591
BspPI GGATC 1 cut(s) 74
BsrDI GCAATG 1 cut(s) 624
BsrI ACTGG 1 cut(s) 299
BssECI CCNNGG 2 cut(s) 248, 307
BssMI GATC 2 cut(s) 79, 313
BssT1I CCWWGG 1 cut(s) 307
Bst2UI CCWGG 1 cut(s) 195
Bst4CI ACNGT 2 cut(s) 100, 252
BstBAI YACGTR 1 cut(s) 482
BstC8I GCNNGC 1 cut(s) 457
BstDEI CTNAG 1 cut(s) 582
BstDSI CCRYGG 1 cut(s) 248
BstENI CCTNNNNNAGG 1 cut(s) 306
BstKTI GATC 2 cut(s) 82, 316
BstMAI GTCTC 2 cut(s) 251, 371
BstMBI GATC 2 cut(s) 79, 313
BstMWI GCNNNNNNNGC 1 cut(s) 452
BstNI CCWGG 1 cut(s) 195
BstSCI CCNGG 1 cut(s) 193
BtgI CCRYGG 1 cut(s) 248
BtsIMutI CAGTG 1 cut(s) 434
Cac8I GCNNGC 1 cut(s) 457
CciI TCATGA 1 cut(s) 591
CviAII CATG 4 cut(s) 14, 69, 215, 592
DdeI CTNAG 1 cut(s) 582
DpnI GATC 2 cut(s) 81, 315
DpnII GATC 2 cut(s) 79, 313
DrdI GACNNNNNNGTC 1 cut(s) 647
DseDI GACNNNNNNGTC 1 cut(s) 647
Ecl136II GAGCTC 1 cut(s) 31
Eco130I CCWWGG 1 cut(s) 307
Eco24I GRGCYC 1 cut(s) 33
Eco53kI GAGCTC 1 cut(s) 31
EcoICRI GAGCTC 1 cut(s) 31
EcoNI CCTNNNNNAGG 1 cut(s) 306
EcoRII CCWGG 1 cut(s) 193
EcoT14I CCWWGG 1 cut(s) 307
EcoT38I GRGCYC 1 cut(s) 33
ErhI CCWWGG 1 cut(s) 307
FaeI CATG 4 cut(s) 17, 72, 218, 595
FaqI GGGAC 1 cut(s) 225
FatI CATG 4 cut(s) 13, 68, 214, 591
FauNDI CATATG 1 cut(s) 556
FriOI GRGCYC 1 cut(s) 33
FspBI CTAG 2 cut(s) 23, 336
Hin1II CATG 4 cut(s) 17, 72, 218, 595
HincII GTYRAC 2 cut(s) 523, 621
HindII GTYRAC 2 cut(s) 523, 621
HindIII AAGCTT 1 cut(s) 413
HinfI GANTC 3 cut(s) 135, 259, 588
HphI GGTGA 2 cut(s) 25, 89
Hpy166II GTNNAC 2 cut(s) 523, 621
Hpy188I TCNGA 2 cut(s) 572, 665
Hpy188III TCNNGA 5 cut(s) 23, 263, 488, 563, 592
Hpy8I GTNNAC 2 cut(s) 523, 621
HpyAV CCTTC 2 cut(s) 283, 601
HpyCH4III ACNGT 2 cut(s) 100, 252
HpyCH4IV ACGT 2 cut(s) 476, 481
HpyCH4V TGCA 3 cut(s) 280, 455, 554
HpyF10VI GCNNNNNNNGC 1 cut(s) 452
HpyF3I CTNAG 1 cut(s) 582
HpySE526I ACGT 2 cut(s) 476, 481
Hsp92II CATG 4 cut(s) 17, 72, 218, 595
Kzo9I GATC 2 cut(s) 79, 313
LmnI GCTCC 1 cut(s) 28
LpnPI CCDG 9 cut(s) 180, 207, 280, 402, 441, 473, 576, 582, 657
MaeI CTAG 2 cut(s) 23, 336
MaeII ACGT 2 cut(s) 476, 481
MaeIII GTNAC 3 cut(s) 3, 431, 477
MalI GATC 2 cut(s) 81, 315
MboI GATC 2 cut(s) 79, 313
MfeI CAATTG 2 cut(s) 155, 450
MhlI GDGCHC 1 cut(s) 33
MluCI AATT 9 cut(s) 59, 118, 127, 155, 321, 371, 437, 450, 513
MlyI GAGTC 1 cut(s) 253
MmeI TCCRAC 1 cut(s) 234
MnlI CCTC 3 cut(s) 19, 265, 370
MseI TTAA 1 cut(s) 602
MspR9I CCNGG 1 cut(s) 195
MunI CAATTG 2 cut(s) 155, 450
Mva1269I GAATGC 1 cut(s) 195
MvaI CCWGG 1 cut(s) 195
MwoI GCNNNNNNNGC 1 cut(s) 452
NdeI CATATG 1 cut(s) 556
NdeII GATC 2 cut(s) 79, 313
NlaIII CATG 4 cut(s) 17, 72, 218, 595
NmuCI GTSAC 2 cut(s) 3, 431
PagI TCATGA 1 cut(s) 591
PctI GAATGC 1 cut(s) 195
PfeI GAWTC 2 cut(s) 135, 588
PflMI CCANNNNNTGG 1 cut(s) 149
PleI GAGTC 1 cut(s) 253
PpsI GAGTC 1 cut(s) 253
Ppu21I YACGTR 1 cut(s) 482
Psp124BI GAGCTC 1 cut(s) 33
Psp6I CCWGG 1 cut(s) 193
PspGI CCWGG 1 cut(s) 193
SacI GAGCTC 1 cut(s) 33
SaqAI TTAA 1 cut(s) 602
Sau3AI GATC 2 cut(s) 79, 313
SchI GAGTC 1 cut(s) 253
ScrFI CCNGG 1 cut(s) 195
SduI GDGCHC 1 cut(s) 33
SmlI CTYRAG 4 cut(s) 167, 263, 416, 536
SmoI CTYRAG 4 cut(s) 167, 263, 416, 536
Sse9I AATT 9 cut(s) 59, 118, 127, 155, 321, 371, 437, 450, 513
SspMI CTAG 2 cut(s) 23, 336
SstI GAGCTC 1 cut(s) 33
StyD4I CCNGG 1 cut(s) 193
StyI CCWWGG 1 cut(s) 307
TaaI ACNGT 2 cut(s) 100, 252
TaiI ACGT 2 cut(s) 479, 484
TaqI TCGA 1 cut(s) 651
TasI AATT 9 cut(s) 59, 118, 127, 155, 321, 371, 437, 450, 513
TfiI GAWTC 2 cut(s) 135, 588
Tru1I TTAA 1 cut(s) 602
Tru9I TTAA 1 cut(s) 602
TscAI CASTG 1 cut(s) 434
TseFI GTSAC 2 cut(s) 3, 431
Tsp45I GTSAC 2 cut(s) 3, 431
TspDTI ATGAA 2 cut(s) 71, 580
TspRI CASTG 1 cut(s) 434
Van91I CCANNNNNTGG 1 cut(s) 149
XagI CCTNNNNNAGG 1 cut(s) 306
XapI RAATTY 1 cut(s) 59
XbaI TCTAGA 1 cut(s) 22
XspI CTAG 2 cut(s) 23, 336
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.