Rmu_sc0000724.1_g000022

disease resistance

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0000724.1
OG0000070
Physical Location & Seq
Forward (+)
106999 .. 110100
3102 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0000724.1_g000022.1.cds

Sequence Viewer

Length: 3102 bp
atgggggctacagaagtttatgatttgaagactctgtctgacgaagactgtttgcaggtatttcagcaacatgtcaacaatgtcaaaccgccgagttttgagttaactaagaaaatcgttaaatattgcgatggattgcctttggctgcgaagacccttggtggtgttttacgctgtaaggaaactgacaaatgggaggaagtattgaataatagattatggactgtgtgtgataatagtggcattctcccagtattaaaattgagctatcattatctcccttcaagtttgaagaggtgctttgcctattgctccatactaccaaatgactatgaattcaagaaaaagcagttaatccttctatggatggcagagggtttgcttcagcaatcagaaggaagtacacagatggaagatattggtgacaactattttgtcgagctcttatctcggtcgctatttcaaaactcgggcaagaacaattcacgatatgtaatgcatgaccttgttggagatttggcacgatgggctgctggaggcacatttttcagactgcaggataaatgggatggtaggtgtgctccaaggatccgacattcatcttacatttctggtctctatgatggggataaaaaatttgagaatgttttaaaattcaagcggttgcggactttcttaccactttcaatttcacaaggtccacaaggtcgtcagcattatctacctcgcaaggttgcttttgatttagtaccaaaattggagtctttacgggtgctctcttttaatggctatcaaataactgagttgccagattcaattggtcatttgaagcatctacggtaccttgatctttcttacacacaaataactagtttgcctgaatcaatcaccactcttttcaacttgcagacattgattttgaaaagttgttctcatttgaaggctctaccaacgaacattagcaatctaactaatctacggcatctcaacaattcacatgcaccgtcattggaaggaatgcctgcacaactaggtcagttgactaatctacaaacactgtgcaagtttttggtgggcaaaggtagcgagtcagggataagcgagatagggcccttattgaatcttcgagggacattgtccatttcaagactgcagaaggtgaatgatgttgaggaagcaaggagggctgacttaactggaaagaaagggcttgatgcattggaactagaatggaatggcataggaaacaaggaattagaggtgcttgacatgttaaaacctcatgaaaagctcagaaaattcatgatcaagggctatggtggtttgacgtttccaaaatggataggatatccttcattcgttgagatgatggttgtaaggttagagaattgtaaaaaatgtcggttcttgcctccacttggacaattatgttctctcaaagaactgtacataactggaatgtctgaagtagaaagcgtgggtcctgagttttatggagatggtagcttgccttttccactgttggagacccttgaatttgaggacatgaaacattggaaggagtggtttccgtgggaacaagtaaaagggaagggagttttcccttgcttaacaatgctatctatctcaagatgccccaatttagagggtaggttacccacaaaccttgtttatctatccaaccttgtgattcgtgaatgcatgcagctggtggtttcgatttccaattataaacaactatgtcaactaaacattgacaattgcaaggcagtggtgcacagaagttcagttgagttcaagttactcaaggttgtaaagcttgctagtatttcagagttcagactccaaatagaggaattcatgagaggattgacaagtgttacgtatttacagattactggttgcgaggagctggcatcttcatggcaaagtgaggatagagtactccaacacttgatgtcacttcatgagctcagaatatataaatgccaaagtctagtatcttttccagaaggtagtctgccatcttctcttaaatatatatggattcagcagtgccattcccttacatcttttgcaagatatcagataccgtcaagtgtaacaagaatagagattcgattgtgcaaaaaattgaaatcattgctaggggagaagggtgaggcttcattaccttcttcttcatctccttgtttgatgcaagacgaatcctttcttgagtacttgaccattactggttgtccatccctcacatccttgtcattcaatggccatgtaccaagggctctcaaacaccttcaaattcatcgaagtgaccaactagagtcgataacagaaagcttctacgagaacaattgtctcgaactttttgatatcttccgttgctcaagtcttaaatccttaccggaggggatatgccacctcaccaatcttcgtttatttgagatttgggactgtaaaagtcttgtttccttcacgagaggagggtcgccaacaggagcctccaatctaaactctcttaagatactcaggattggtcattgtgaaggtcttgtgccttttctacgagagggggggtttactgccaacgtaacatcaattgatatagcaggtttcgatatttttcaactcttcagttgggggctgcatcacttaacctctcttagacagttgaggatccaaggtgctacagatgtggtctcttttccacctgatgagaatcaaatactgcagctccccaaatctctcactagactcacgttcggatactttgtaaatttgatcaaactcagcaagggtcttcaattcctcacctctcttcaatctcttgaaatttgggactgtcctaagctagcattcattccagacaccggcctgcctctttcacttcagaaacttagtatcaaaagatgcccggagatagaagagaaatgcaaacaaggaagaggaagatattggccaaaaatattacgcatccctcacatacagcttggaggctcagactcagaagccaactcggatatcgatgaggacagcagctggaacacgtatataagtgaaaagttgcaagagatctctagtgcagactctccaccttcatag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
NB-ARC

Protein Analysis

1033

Amino Acids

117.05

Weight (kDa)

8.16

Isoelectric Point (pI)

48.78

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000070)

Species Orthologous Gene IDs
fragaria_vesca FvH4_7g00360 FvH4_7g00850 FvH4_7g02400 FvH4_7g02430 FvH4_7g02450 FvH4_7g25671 FvH4_7g25680 FvH4_7g25683 FvH4_7g26980 FvH4_7g27330 FvH4_7g27355 FvH4_7g27610 FvH4_7g27642 FvH4_7g27890 FvH4_7g27891 FvH4_7g27891 FvH4_7g27891 FvH4_7g28110 FvH4_7g28390
malus_domestica MD00G1070800.v1.1 MD00G1168000.v1.1 MD00G1168300.v1.1 MD00G1168700.v1.1 MD02G1293100.v1.1 MD02G1293200.v1.1 MD02G1314300.v1.1 MD03G1009000.v1.1 MD03G1009400.v1.1 MD03G1042300.v1.1 MD03G1042400.v1.1 MD07G1033600.v1.1 MD07G1033700.v1.1 MD07G1033900.v1.1 MD11G1011400.v1.1 MD11G1011700.v1.1 MD11G1029800.v1.1 MD11G1029900.v1.1 MD11G1030300.v1.1 MD11G1030400.v1.1 MD11G1030500.v1.1 MD11G1031300.v1.1 MD11G1031600.v1.1 MD11G1032000.v1.1 MD11G1033200.v1.1 MD11G1033600.v1.1 MD11G1033800.v1.1 MD11G1033900.v1.1 MD11G1034100.v1.1 MD11G1034400.v1.1 MD11G1040600.v1.1 MD11G1041100.v1.1 MD11G1043100.v1.1 MD11G1043500.v1.1 MD11G1044500.v1.1 MD11G1045100.v1.1 MD11G1045600.v1.1
prunus_persica Prupe.2G022400_v2.0.a1 Prupe.2G022400_v2.0.a1 Prupe.2G022400_v2.0.a1 Prupe.2G022500_v2.0.a1 Prupe.2G022500_v2.0.a1 Prupe.2G022900_v2.0.a1 Prupe.2G023500_v2.0.a1 Prupe.2G023500_v2.0.a1 Prupe.2G023500_v2.0.a1 Prupe.2G023500_v2.0.a1 Prupe.2G023500_v2.0.a1 Prupe.2G023500_v2.0.a1 Prupe.2G023600_v2.0.a1 Prupe.2G028000_v2.0.a1 Prupe.2G030200_v2.0.a1 Prupe.2G067600_v2.0.a1 Prupe.8G117900_v2.0.a1
pyrus_communis pycom02g26350 pycom03g03270 pycom07g02370 pycom11g00750 pycom11g00790 pycom11g02340 pycom11g02370 pycom11g02380 pycom11g02390 pycom11g02410 pycom11g02460 pycom11g02470 pycom11g02500 pycom11g02510 pycom11g02520 pycom11g02530 pycom11g02580 pycom11g02590 pycom11g02680 pycom11g02710 pycom11g02720 pycom11g02730 pycom11g02750 pycom11g02760 pycom11g02770 pycom11g03690 pycom13g25120 pycom13g25130 pycom13g25140 pycom13g25170 pycom13g25180 pycom13g25190 pycom13g25210
rosa_chinensis RchiOBHm_Chr1g0315001 RchiOBHm_Chr1g0315411 RchiOBHm_Chr1g0317951 RchiOBHm_Chr1g0319741 RchiOBHm_Chr1g0319841 RchiOBHm_Chr1g0319911 RchiOBHm_Chr1g0319991 RchiOBHm_Chr1g0320001 RchiOBHm_Chr1g0320021 RchiOBHm_Chr1g0320081 RchiOBHm_Chr1g0320111 RchiOBHm_Chr1g0320131 RchiOBHm_Chr1g0320161 RchiOBHm_Chr1g0320171 RchiOBHm_Chr1g0320241 RchiOBHm_Chr1g0320281 RchiOBHm_Chr1g0320411 RchiOBHm_Chr1g0320461 RchiOBHm_Chr1g0320551 RchiOBHm_Chr1g0320581 RchiOBHm_Chr1g0320661 RchiOBHm_Chr1g0320891 RchiOBHm_Chr1g0320971 RchiOBHm_Chr1g0321021 RchiOBHm_Chr1g0321031 RchiOBHm_Chr1g0321091 RchiOBHm_Chr1g0321351 RchiOBHm_Chr1g0321481 RchiOBHm_Chr1g0321491 RchiOBHm_Chr1g0327521 RchiOBHm_Chr1g0328061 RchiOBHm_Chr1g0334991 RchiOBHm_Chr1g0373781 RchiOBHm_Chr1g0373891 RchiOBHm_Chr1g0374841 RchiOBHm_Chr2g0131111 RchiOBHm_Chr2g0131121 RchiOBHm_Chr4g0408901 RchiOBHm_Chr5g0041691 RchiOBHm_Chr7g0237021
rosa_laevigata RLG00000019168 RLG00000030456 RLG00000030460 RLG00000030571
rosa_multiflora Rmu_co7963468.1_g000001 Rmu_co7991248.1_g000001 Rmu_co8195256.1_g000001 Rmu_co8312199.1_g000001 Rmu_co8349215.1_g000001 Rmu_co8351041.1_g000001 Rmu_co8422719.1_g000001 Rmu_co8450711.1_g000001 Rmu_co8465555.1_g000001 Rmu_co8489965.1_g000001 Rmu_sc0000087.1_g000014 Rmu_sc0000272.1_g000015 Rmu_sc0000724.1_g000006 Rmu_sc0000724.1_g000021 Rmu_sc0000724.1_g000022 Rmu_sc0000861.1_g000024 Rmu_sc0001049.1_g000006 Rmu_sc0001049.1_g000007 Rmu_sc0001512.1_g000001 Rmu_sc0002022.1_g000004 Rmu_sc0002063.1_g000011 Rmu_sc0002131.1_g000024 Rmu_sc0002337.1_g000012 Rmu_sc0002341.1_g000005 Rmu_sc0002539.1_g000117 Rmu_sc0002745.1_g000005 Rmu_sc0002745.1_g000006 Rmu_sc0003145.1_g000002 Rmu_sc0003199.1_g000007 Rmu_sc0003270.1_g000039 Rmu_sc0003270.1_g000040 Rmu_sc0003423.1_g000001 Rmu_sc0003423.1_g000002 Rmu_sc0003629.1_g000067 Rmu_sc0004039.1_g000002 Rmu_sc0004555.1_g000001 Rmu_sc0004555.1_g000005 Rmu_sc0004555.1_g000006 Rmu_sc0004947.1_g000025 Rmu_sc0004947.1_g000026 Rmu_sc0005255.1_g000025 Rmu_sc0007977.1_g000016 Rmu_sc0008752.1_g000005 Rmu_sc0009236.1_g000004 Rmu_sc0009236.1_g000008 Rmu_sc0009236.1_g000009 Rmu_sc0009236.1_g000010 Rmu_sc0011424.1_g000036 Rmu_sc0013413.1_g000001 Rmu_sc0013735.1_g000002 Rmu_sc0015304.1_g000002 Rmu_sc0015304.1_g000003 Rmu_sc0015585.1_g000001 Rmu_sc0018410.1_g000001 Rmu_sc0022723.1_g000001 Rmu_sc0022723.1_g000002 Rmu_sc0022724.1_g000001 Rmu_sc0023430.1_g000001 Rmu_sc0026053.1_g000001 Rmu_sc0026429.1_g000002 Rmu_sc0026647.1_g000001 Rmu_sc0031359.1_g000001 Rmu_ssc0000042.1_g000040 Rmu_ssc0000081.1_g000001 Rmu_ssc0000300.1_g000011
rosa_roxburghii Rroxscaffold_160G00433620 Rroxscaffold_160G00433990 Rroxscaffold_1G00038820 Rroxscaffold_2G00113190 Rroxscaffold_4G00283240 Rroxscaffold_4G00283930 Rroxscaffold_4G00284010 Rroxscaffold_4G00322600 Rroxscaffold_4G00327710 Rroxscaffold_4G00328100 Rroxscaffold_4G00328130 Rroxscaffold_4G00331590 Rroxscaffold_5G00353280
rosa_rugosa Rorug01G0004200 Rorug01G0018800 Rorug01G0018900 Rorug01G0029900 Rorug01G0030000 Rorug01G0030000 Rorug01G0030000 Rorug01G0030200 Rorug01G0030300 Rorug01G0030800 Rorug01G0032400 Rorug01G0032900 Rorug01G0055800 Rorug01G0067600 Rorug01G0067700 Rorug01G0067800 Rorug01G0067900 Rorug01G0068000 Rorug01G0379500 Rorug01G0379600 Rorug01G0379600 Rorug01G0385200 Rorug01G0385300 Rorug02G0295100 Rorug04G0088500 Rorug04G0088600 Rorug05G0194900 Rorug07G0301400
rosa_samantha Rh1AG014800 Rh1AG015200 Rh1AG030500 Rh1AG041800 Rh1AG042300 Rh1AG042700 Rh1AG042800 Rh1AG042900 Rh1AG045000 Rh1AG085100 Rh1AG085200 Rh1AG388600 Rh1AG396700 Rh1AG396900 Rh1BG007300 Rh1BG039200 Rh1BG039600 Rh1BG042800 Rh1BG067300 Rh1BG109700 Rh1BG109900 Rh1BG354000 Rh1CG043800 Rh1CG044400 Rh1DG008600 Rh1DG022900 Rh1DG023400 Rh1DG023600 Rh1DG023900 Rh1DG024100 Rh1DG024400 Rh1DG024500 Rh1DG025500 Rh1DG025700 Rh1DG026500 Rh1DG026800 Rh1DG038900 Rh1DG048800 Rh1DG049300 Rh1DG051700 Rh1DG052000 Rh1DG146200 Rh1DG383500 Rh2BG354900 Rh2CG333600 Rh4BG149600 Rh4BG149700 Rh4CG160600
rosa_wichuraiana Rw0G001100 Rw0G001130 Rw0G001180 Rw0G012580 Rw1G003480 Rw1G003540 Rw1G003600 Rw1G003640 Rw1G003670 Rw1G003750 Rw1G003940 Rw1G006650 Rw1G034550 Rw1G034560 Rw1G034650 Rw1G034660 Rw1G035170 Rw1G035190 Rw1G037060 Rw2G028210 Rw4G012540 Rw5G026370 Rw7G037900

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1731
Acc36I ACCTGC 2 cut(s) 46, 2600
Acc65I GGTACC 1 cut(s) 840
AccB1I GGYRCC 1 cut(s) 840
AciI CCGC 3 cut(s) 89, 661, 667
AclWI GGATC 4 cut(s) 583, 596, 2671, 2684
AcoI YGGCCR 2 cut(s) 2269, 2957
AcsI RAATTY 9 cut(s) 335, 635, 653, 1298, 1535, 1856, 2301, 2776, 2832
AcuI CTGAAG 4 cut(s) 368, 1485, 2617, 2873
AfaI GTAC 7 cut(s) 403, 750, 842, 1448, 1944, 2222, 2277
AfiI CCNNNNNNNGG 3 cut(s) 1418, 1852, 2870
AflII CTTAAG 1 cut(s) 2519
AflIII ACRYGT 3 cut(s) 70, 1269, 3045
AhlI ACTAGT 1 cut(s) 869
Alw21I GWGCWC 5 cut(s) 444, 583, 777, 1779, 1974
Alw26I GTCTC 4 cut(s) 620, 1520, 2363, 2704
Alw44I GTGCAC 1 cut(s) 1775
AlwI GGATC 4 cut(s) 583, 596, 2671, 2684
AlwNI CAGNNNCTG 1 cut(s) 3039
Ama87I CYCGRG 1 cut(s) 469
AoxI GGCC 4 cut(s) 1109, 2269, 2872, 2957
ApaI GGGCCC 1 cut(s) 1113
ApaLI GTGCAC 1 cut(s) 1775
ApeKI GCWGC 6 cut(s) 146, 530, 1705, 2644, 2731, 3036
ApoI RAATTY 9 cut(s) 335, 635, 653, 1298, 1535, 1856, 2301, 2776, 2832
ArsI GACNNNNNNTTYG 6 cut(s) 416, 448, 746, 778, 901, 933
Asp700I GAANNNNTTC 1 cut(s) 2211
Asp718I GGTACC 1 cut(s) 840
AspS9I GGNCC 4 cut(s) 698, 1109, 1110, 1481
AsuC2I CCSGG 1 cut(s) 2915
AsuHPI GGTGA 6 cut(s) 434, 880, 1171, 2171, 2416, 2803
AsuNHI GCTAGC 1 cut(s) 2851
AvaI CYCGRG 1 cut(s) 469
AvaII GGWCC 2 cut(s) 698, 1481
BaeGI GKGCMC 2 cut(s) 1113, 1779
BalI TGGCCA 2 cut(s) 2271, 2959
BamHI GGATCC 2 cut(s) 588, 2676
BanI GGYRCC 1 cut(s) 840
BanII GRGCYC 4 cut(s) 444, 1113, 1974, 2287
BauI CACGAG 1 cut(s) 2476
BbsI GAAGAC 4 cut(s) 35, 51, 158, 2792
Bbv12I GWGCWC 5 cut(s) 444, 583, 777, 1779, 1974
BbvI GCAGC 6 cut(s) 133, 517, 1717, 2631, 2743, 3048
BceAI ACGGC 1 cut(s) 995
BciVI GTATCC 1 cut(s) 2759
BclI TGATCA 2 cut(s) 1305, 2781
BcnI CCSGG 1 cut(s) 2915
BcoDI GTCTC 4 cut(s) 620, 1520, 2363, 2704
BcuI ACTAGT 1 cut(s) 869
BfmI CTRYAG 5 cut(s) 9, 554, 1151, 2688, 2729
BfrI CTTAAG 1 cut(s) 2519
BfuAI ACCTGC 2 cut(s) 46, 2600
BfuI GTATCC 1 cut(s) 2759
BglII AGATCT 1 cut(s) 3072
BisI GCNGC 6 cut(s) 147, 531, 1706, 2645, 2732, 3037
BlsI GCNGC 6 cut(s) 148, 532, 1707, 2646, 2733, 3038
BmcAI AGTACT 2 cut(s) 1944, 2222
Bme1390I CCNGG 1 cut(s) 2915
Bme18I GGWCC 2 cut(s) 698, 1481
BmeT110I CYCGRG 1 cut(s) 469
BmgT120I GGNCC 4 cut(s) 698, 1109, 1110, 1481
BmiI GGNNCC 6 cut(s) 590, 842, 1111, 1482, 2500, 2678
BmrFI CCNGG 1 cut(s) 2915
BmrI ACTGGG 1 cut(s) 245
BmsI GCATC 9 cut(s) 841, 991, 1204, 1622, 1925, 2187, 2656, 2900, 2982
BmtI GCTAGC 1 cut(s) 2855
BmuI ACTGGG 1 cut(s) 245
BpiI GAAGAC 4 cut(s) 35, 51, 158, 2792
BpmI CTGGAG 1 cut(s) 555
Bpu10I CCTNAGC 1 cut(s) 2847
BpuEI CTTGAG 4 cut(s) 1612, 1790, 2237, 2371
BpuMI CCSGG 1 cut(s) 2915
Bsa29I ATCGAT 1 cut(s) 3024
BsaAI YACGTR 2 cut(s) 1884, 3048
BsaBI GATNNNNATC 1 cut(s) 2718
BsaI GGTCTC 3 cut(s) 620, 1520, 2704
BsaJI CCNNGG 5 cut(s) 157, 584, 1571, 2279, 2680
BsaWI WCCGGW 1 cut(s) 2404
BsaXI ACNNNNNCTCC 2 cut(s) 2718, 2748
Bsc4I CCNNNNNNNGG 3 cut(s) 1418, 1852, 2870
Bse118I RCCGGY 1 cut(s) 2870
Bse1I ACTGG 5 cut(s) 251, 1201, 1459, 1903, 2239
Bse3DI GCAATG 1 cut(s) 2141
Bse8I GATNNNNATC 1 cut(s) 2718
BseCI ATCGAT 1 cut(s) 3024
BseDI CCNNGG 5 cut(s) 157, 584, 1571, 2279, 2680
BseGI GGATG 5 cut(s) 372, 574, 2243, 2252, 2973
BseJI GATNNNNATC 1 cut(s) 2718
BseLI CCNNNNNNNGG 3 cut(s) 1418, 1852, 2870
BseMI GCAATG 1 cut(s) 2141
BseMII CTCAG 8 cut(s) 792, 1306, 1476, 1987, 2542, 2803, 3012, 3018
BseNI ACTGG 5 cut(s) 251, 1201, 1459, 1903, 2239
BseRI GAGGAG 2 cut(s) 1922, 2496
BseSI GKGCMC 2 cut(s) 1113, 1779
BseXI GCAGC 6 cut(s) 133, 517, 1717, 2631, 2743, 3048
BsgI GTGCAG 2 cut(s) 1008, 3102
Bsh1285I CGRYCG 1 cut(s) 455
BshFI GGCC 4 cut(s) 1111, 2271, 2874, 2959
BshNI GGYRCC 1 cut(s) 840
BshVI ATCGAT 1 cut(s) 3024
BsiEI CGRYCG 1 cut(s) 455
BsiHKAI GWGCWC 5 cut(s) 444, 583, 777, 1779, 1974
BsiHKCI CYCGRG 1 cut(s) 469
BsiSI CCGG 3 cut(s) 2405, 2871, 2915
BslFI GGGAC 3 cut(s) 1144, 2465, 2852
BslI CCNNNNNNNGG 3 cut(s) 1418, 1852, 2870
BsmAI GTCTC 4 cut(s) 620, 1520, 2363, 2704
BsmFI GGGAC 3 cut(s) 1144, 2465, 2852
BsmI GAATGC 4 cut(s) 243, 1023, 1703, 2855
BsnI GGCC 4 cut(s) 1111, 2271, 2874, 2959
Bso31I GGTCTC 3 cut(s) 620, 1520, 2704
BsoBI CYCGRG 1 cut(s) 469
Bsp120I GGGCCC 1 cut(s) 1109
Bsp1286I GDGCHC 7 cut(s) 444, 583, 777, 1113, 1779, 1974, 2287
Bsp1407I TGTACA 1 cut(s) 1446
Bsp143I GATC 6 cut(s) 588, 847, 1305, 2676, 2781, 3072
BspACI CCGC 3 cut(s) 89, 661, 667
BspANI GGCC 4 cut(s) 1111, 2271, 2874, 2959
BspCNI CTCAG 8 cut(s) 793, 1305, 1477, 1986, 2541, 2802, 3011, 3017
BspDI ATCGAT 1 cut(s) 3024
BspHI TCATGA 4 cut(s) 1282, 1302, 1860, 1966
BspLI GGNNCC 6 cut(s) 590, 842, 1111, 1482, 2500, 2678
BspMAI CTGCAG 3 cut(s) 558, 1155, 2733
BspMI ACCTGC 2 cut(s) 46, 2600
BspOI GCTAGC 1 cut(s) 2855
BspPI GGATC 4 cut(s) 583, 596, 2671, 2684
BspT107I GGYRCC 1 cut(s) 840
BspTI CTTAAG 1 cut(s) 2519
BspTNI GGTCTC 3 cut(s) 620, 1520, 2704
BsrDI GCAATG 1 cut(s) 2141
BsrFI RCCGGY 1 cut(s) 2870
BsrGI TGTACA 1 cut(s) 1446
BsrI ACTGG 5 cut(s) 251, 1201, 1459, 1903, 2239
BssAI RCCGGY 1 cut(s) 2870
BssECI CCNNGG 5 cut(s) 157, 584, 1571, 2279, 2680
BssMI GATC 6 cut(s) 588, 847, 1305, 2676, 2781, 3072
BssSI CACGAG 1 cut(s) 2476
BssT1I CCWWGG 4 cut(s) 157, 584, 2279, 2680
Bst2BI CACGAG 1 cut(s) 2476
Bst6I CTCTTC 5 cut(s) 287, 2636, 2823, 2919, 2938
BstAFI CTTAAG 1 cut(s) 2519
BstAUI TGTACA 1 cut(s) 1446
BstBAI YACGTR 2 cut(s) 1884, 3048
BstC8I GCNNGC 7 cut(s) 1023, 1508, 1703, 1821, 1914, 2853, 2876
BstDSI CCRYGG 1 cut(s) 1571
BstEII GGTNACC 1 cut(s) 1653
BstF5I GGATG 5 cut(s) 372, 574, 2243, 2252, 2973
BstKTI GATC 6 cut(s) 591, 850, 1308, 2679, 2784, 3075
BstMAI GTCTC 4 cut(s) 620, 1520, 2363, 2704
BstMBI GATC 6 cut(s) 588, 847, 1305, 2676, 2781, 3072
BstMCI CGRYCG 1 cut(s) 455
BstMWI GCNNNNNNNGC 3 cut(s) 527, 1083, 1184
BstNSI RCATGY 4 cut(s) 74, 1001, 1273, 1705
BstPI GGTNACC 1 cut(s) 1653
BstSCI CCNGG 1 cut(s) 2913
BstSFI CTRYAG 5 cut(s) 9, 554, 1151, 2688, 2729
BstSLI GKGCMC 2 cut(s) 1113, 1779
BstSNI TACGTA 1 cut(s) 1884
BstV1I GCAGC 6 cut(s) 133, 517, 1717, 2631, 2743, 3048
BstV2I GAAGAC 4 cut(s) 35, 51, 158, 2792
BstX2I RGATCY 3 cut(s) 588, 2676, 3072
BstYI RGATCY 3 cut(s) 588, 2676, 3072
Bsu15I ATCGAT 1 cut(s) 3024
BsuI GTATCC 1 cut(s) 2759
BsuRI GGCC 4 cut(s) 1111, 2271, 2874, 2959
BsuTUI ATCGAT 1 cut(s) 3024
BtgI CCRYGG 1 cut(s) 1571
BtgZI GCGATG 1 cut(s) 144
BtsCI GGATG 5 cut(s) 372, 574, 2243, 2252, 2973
BtsI GCAGTG 2 cut(s) 1776, 2060
BtsIMutI CAGTG 4 cut(s) 1055, 1517, 1776, 2060
BveI ACCTGC 2 cut(s) 46, 2600
Cac8I GCNNGC 7 cut(s) 1023, 1508, 1703, 1821, 1914, 2853, 2876
CaiI CAGNNNCTG 1 cut(s) 3039
CciI TCATGA 4 cut(s) 1282, 1302, 1860, 1966
Cfr10I RCCGGY 1 cut(s) 2870
Cfr13I GGNCC 4 cut(s) 698, 1109, 1110, 1481
ClaI ATCGAT 1 cut(s) 3024
Csp6I GTAC 7 cut(s) 402, 749, 841, 1447, 1943, 2221, 2276
CspCI CAANNNNNGTGG 2 cut(s) 1648, 1683
CviQI GTAC 7 cut(s) 402, 749, 841, 1447, 1943, 2221, 2276
DpnI GATC 6 cut(s) 590, 849, 1307, 2678, 2783, 3074
DpnII GATC 6 cut(s) 588, 847, 1305, 2676, 2781, 3072
DraI TTTAAA 1 cut(s) 651
EaeI YGGCCR 2 cut(s) 2269, 2957
Eam1104I CTCTTC 5 cut(s) 287, 2636, 2823, 2919, 2938
EarI CTCTTC 5 cut(s) 287, 2636, 2823, 2919, 2938
Ecl136II GAGCTC 2 cut(s) 442, 1972
Eco105I TACGTA 1 cut(s) 1884
Eco130I CCWWGG 4 cut(s) 157, 584, 2279, 2680
Eco24I GRGCYC 4 cut(s) 444, 1113, 1974, 2287
Eco31I GGTCTC 3 cut(s) 620, 1520, 2704
Eco32I GATATC 4 cut(s) 1349, 2084, 2374, 3022
Eco47I GGWCC 2 cut(s) 698, 1481
Eco53kI GAGCTC 2 cut(s) 442, 1972
Eco57I CTGAAG 4 cut(s) 368, 1485, 2617, 2873
Eco88I CYCGRG 1 cut(s) 469
Eco91I GGTNACC 1 cut(s) 1653
EcoICRI GAGCTC 2 cut(s) 442, 1972
EcoO109I RGGNCCY 3 cut(s) 1109, 1110, 1481
EcoO65I GGTNACC 1 cut(s) 1653
EcoRI GAATTC 2 cut(s) 335, 1856
EcoRV GATATC 4 cut(s) 1349, 2084, 2374, 3022
EcoT14I CCWWGG 4 cut(s) 157, 584, 2279, 2680
EcoT22I ATGCAT 3 cut(s) 501, 1219, 1703
EcoT38I GRGCYC 4 cut(s) 444, 1113, 1974, 2287
ErhI CCWWGG 4 cut(s) 157, 584, 2279, 2680
FalI AAGNNNNNCTT 2 cut(s) 284, 316
FaqI GGGAC 3 cut(s) 1144, 2465, 2852
FbaI TGATCA 2 cut(s) 1305, 2781
Fnu4HI GCNGC 6 cut(s) 147, 531, 1706, 2645, 2732, 3037
FokI GGATG 5 cut(s) 379, 581, 2230, 2239, 2960
FriOI GRGCYC 4 cut(s) 444, 1113, 1974, 2287
Fsp4HI GCNGC 6 cut(s) 147, 531, 1706, 2645, 2732, 3037
GluI GCNGC 6 cut(s) 147, 531, 1706, 2645, 2732, 3037
GsuI CTGGAG 1 cut(s) 555
HaeIII GGCC 4 cut(s) 1111, 2271, 2874, 2959
HapII CCGG 3 cut(s) 2405, 2871, 2915
HincII GTYRAC 4 cut(s) 76, 105, 1041, 1745
HindII GTYRAC 4 cut(s) 76, 105, 1041, 1745
HindIII AAGCTT 2 cut(s) 1817, 2338
HpaI GTTAAC 1 cut(s) 105
HpaII CCGG 3 cut(s) 2405, 2871, 2915
HphI GGTGA 6 cut(s) 434, 880, 1171, 2171, 2416, 2803
Hpy166II GTNNAC 8 cut(s) 76, 105, 404, 701, 1041, 1745, 1777, 2580
Hpy8I GTNNAC 8 cut(s) 76, 105, 404, 701, 1041, 1745, 1777, 2580
HpyCH4IV ACGT 5 cut(s) 1328, 1883, 2589, 2759, 3047
HpyF10VI GCNNNNNNNGC 3 cut(s) 527, 1083, 1184
HpySE526I ACGT 5 cut(s) 1328, 1883, 2589, 2759, 3047
KpnI GGTACC 1 cut(s) 844
Ksp22I TGATCA 2 cut(s) 1305, 2781
KspAI GTTAAC 1 cut(s) 105
Kzo9I GATC 6 cut(s) 588, 847, 1305, 2676, 2781, 3072
LmnI GCTCC 5 cut(s) 317, 586, 1909, 2498, 2739
Lsp1109I GCAGC 6 cut(s) 133, 517, 1717, 2631, 2743, 3048
LweI GCATC 9 cut(s) 841, 991, 1204, 1622, 1925, 2187, 2656, 2900, 2982
MaeII ACGT 5 cut(s) 1328, 1883, 2589, 2759, 3047
MaeIII GTNAC 8 cut(s) 422, 1653, 1800, 1879, 1959, 2101, 2312, 2590
MalI GATC 6 cut(s) 590, 849, 1307, 2678, 2783, 3074
MboI GATC 6 cut(s) 588, 847, 1305, 2676, 2781, 3072
MfeI CAATTG 4 cut(s) 816, 1759, 2353, 2598
MflI RGATCY 3 cut(s) 588, 2676, 3072
MhlI GDGCHC 7 cut(s) 444, 583, 777, 1113, 1779, 1974, 2287
MlsI TGGCCA 2 cut(s) 2271, 2959
MluNI TGGCCA 2 cut(s) 2271, 2959
MlyI GAGTC 8 cut(s) 25, 770, 1097, 1836, 2333, 2748, 2996, 3080
MmeI TCCRAC 5 cut(s) 490, 616, 1503, 1704, 1972
Mox20I TGGCCA 2 cut(s) 2271, 2959
Mph1103I ATGCAT 3 cut(s) 501, 1219, 1703
MroXI GAANNNNTTC 1 cut(s) 2211
MscI TGGCCA 2 cut(s) 2271, 2959
MslI CAYNNNNRTG 2 cut(s) 1921, 2310
Msp20I TGGCCA 2 cut(s) 2271, 2959
MspA1I CMGCKG 2 cut(s) 1708, 3039
MspCI CTTAAG 1 cut(s) 2519
MspI CCGG 3 cut(s) 2405, 2871, 2915
MspR9I CCNGG 1 cut(s) 2915
MunI CAATTG 4 cut(s) 816, 1759, 2353, 2598
Mva1269I GAATGC 4 cut(s) 243, 1023, 1703, 2855
MwoI GCNNNNNNNGC 3 cut(s) 527, 1083, 1184
NciI CCSGG 1 cut(s) 2915
NdeII GATC 6 cut(s) 588, 847, 1305, 2676, 2781, 3072
NheI GCTAGC 1 cut(s) 2851
NlaIV GGNNCC 6 cut(s) 590, 842, 1111, 1482, 2500, 2678
NmeAIII GCCGAG 1 cut(s) 117
NmuCI GTSAC 3 cut(s) 422, 1959, 2312
NsiI ATGCAT 3 cut(s) 501, 1219, 1703
NspI RCATGY 4 cut(s) 74, 1001, 1273, 1705
PaeI GCATGC 1 cut(s) 1705
PagI TCATGA 4 cut(s) 1282, 1302, 1860, 1966
PciI ACATGT 2 cut(s) 70, 1269
PctI GAATGC 4 cut(s) 243, 1023, 1703, 2855
PdmI GAANNNNTTC 1 cut(s) 2211
PfeI GAWTC 8 cut(s) 812, 881, 1120, 1690, 2047, 2116, 2207, 2719
PflFI GACNNNGTC 2 cut(s) 34, 1135
PkrI GCNGC 6 cut(s) 148, 532, 1707, 2646, 2733, 3038
PleI GAGTC 8 cut(s) 25, 769, 1096, 1836, 2332, 2748, 2996, 3080
PpsI GAGTC 8 cut(s) 25, 769, 1096, 1836, 2332, 2748, 2996, 3080
Ppu21I YACGTR 2 cut(s) 1884, 3048
PpuMI RGGWCCY 1 cut(s) 1481
PscI ACATGT 2 cut(s) 70, 1269
PsiI TTATAA 1 cut(s) 1731
Psp124BI GAGCTC 2 cut(s) 444, 1974
Psp5II RGGWCCY 1 cut(s) 1481
PspEI GGTNACC 1 cut(s) 1653
PspN4I GGNNCC 6 cut(s) 590, 842, 1111, 1482, 2500, 2678
PspOMI GGGCCC 1 cut(s) 1109
PspPI GGNCC 4 cut(s) 698, 1109, 1110, 1481
PspPPI RGGWCCY 1 cut(s) 1481
PstI CTGCAG 3 cut(s) 558, 1155, 2733
PstNI CAGNNNCTG 1 cut(s) 3039
PsuI RGATCY 3 cut(s) 588, 2676, 3072
PsyI GACNNNGTC 2 cut(s) 34, 1135
PvuII CAGCTG 2 cut(s) 1708, 3039
RsaI GTAC 7 cut(s) 403, 750, 842, 1448, 1944, 2222, 2277
RsaNI GTAC 7 cut(s) 402, 749, 841, 1447, 1943, 2221, 2276
RseI CAYNNNNRTG 2 cut(s) 1921, 2310
SacI GAGCTC 2 cut(s) 444, 1974
SatI GCNGC 6 cut(s) 147, 531, 1706, 2645, 2732, 3037
Sau3AI GATC 6 cut(s) 588, 847, 1305, 2676, 2781, 3072
Sau96I GGNCC 4 cut(s) 698, 1109, 1110, 1481
ScaI AGTACT 2 cut(s) 1944, 2222
SchI GAGTC 8 cut(s) 25, 770, 1097, 1836, 2333, 2748, 2996, 3080
ScrFI CCNGG 1 cut(s) 2915
SduI GDGCHC 7 cut(s) 444, 583, 777, 1113, 1779, 1974, 2287
SfaNI GCATC 9 cut(s) 841, 991, 1204, 1622, 1925, 2187, 2656, 2900, 2982
SfcI CTRYAG 5 cut(s) 9, 554, 1151, 2688, 2729
SinI GGWCC 2 cut(s) 698, 1481
SmiMI CAYNNNNRTG 2 cut(s) 1921, 2310
SmlI CTYRAG 5 cut(s) 1627, 1805, 2216, 2386, 2519
SmoI CTYRAG 5 cut(s) 1627, 1805, 2216, 2386, 2519
SnaBI TACGTA 1 cut(s) 1884
SpeI ACTAGT 1 cut(s) 869
SphI GCATGC 1 cut(s) 1705
SsiI CCGC 3 cut(s) 89, 661, 667
SspI AATATT 2 cut(s) 125, 2967
SstI GAGCTC 2 cut(s) 444, 1974
StyD4I CCNGG 1 cut(s) 2913
StyI CCWWGG 4 cut(s) 157, 584, 2279, 2680
TaiI ACGT 5 cut(s) 1331, 1886, 2592, 2762, 3050
TaqI TCGA 9 cut(s) 438, 1126, 1718, 2119, 2308, 2327, 2361, 2616, 3024
TaqII GACCGA 1 cut(s) 441
TatI WGTACW 4 cut(s) 401, 1446, 1942, 2220
TfiI GAWTC 8 cut(s) 812, 881, 1120, 1690, 2047, 2116, 2207, 2719
TscAI CASTG 4 cut(s) 1062, 1524, 1776, 2060
TseFI GTSAC 3 cut(s) 422, 1959, 2312
TseI GCWGC 6 cut(s) 146, 530, 1705, 2644, 2731, 3036
Tsp45I GTSAC 3 cut(s) 422, 1959, 2312
TspGWI ACGGA 2 cut(s) 1560, 2369
TspRI CASTG 4 cut(s) 1062, 1524, 1776, 2060
Tth111I GACNNNGTC 2 cut(s) 34, 1135
Vha464I CTTAAG 1 cut(s) 2519
VneI GTGCAC 1 cut(s) 1775
VpaK11BI GGWCC 2 cut(s) 698, 1481
XapI RAATTY 9 cut(s) 335, 635, 653, 1298, 1535, 1856, 2301, 2776, 2832
XceI RCATGY 4 cut(s) 74, 1001, 1273, 1705
XmnI GAANNNNTTC 1 cut(s) 2211
ZrmI AGTACT 2 cut(s) 1944, 2222
Zsp2I ATGCAT 3 cut(s) 501, 1219, 1703
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.