pycom11g00790

disease resistance

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr11
Physical Location & Seq
Reverse (-)
560557 .. 564941
4385 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom11g00790.3

Sequence Viewer

Length: 4131 bp
ATGGCGGGAGAGGCTTTTCTTGTGGCATTCCTCCAAGTGCTGGTTGACAAGTTGGCGCATCGAGAGGTCTTCAAGTACTTTGGACTCGTAAAGGGCGTCGATCAAAAACTGAAGAAATGGAGTGGCACCTTGTCTGCTATTGGAGCAGTGCTGAATGACGCCGAGGAAAGGCAACTGACGGCTGAGAGCAACGCACTGAAGCTCTGGCTCGATGATCTCAGGGACTTGGCTTTTGATGTGGAAGACGTGTTGGACAAATATCATACTAAAATGTTGAAACGTCAGATACAACATGCTCATTCCTGCACAACAAGCAAAGCATGGAAATCAATTCCTAATCGTGTTTCCAAATTCAAAACAACAAGCAAAGCATGGATATCAATTCCTAATCGTGTTTCCAACTTCAAAATGAACTTGGAAATACAGAAGATTACCGAGCAATTACAAGAGATATCCGAACGAAAAGACCAGCTTGGTTTGAGAATTGATACTGCGACGTCGACTATAAGGGCACGCCAAAACATATCCCCTAGTTCCAGTCAACCAGATGGACCTGTGATTGGAAGGGATGAGGACAAAAGGCAGATTGTTGAGCTGCTGTCGAAACAAGAGCATCGTGCTGCCAATTTCGATGTAGTTGCAATTGTTGGTATGGCTGGAGTCGGAAAGACAACACTTGCTGGACAAGTACTCAAAGATATGGTTGCAACTCAAACGTTTCAACCAGCTGTTTGGGTGTGCGTATCTGACGACTTCAACCTTGGAAGAGTGACAAAGCAAATTCTTGAATCAATCACGTCTCGGCAATGTGCCACAGAAGATTACAATAAGGTTCAAGATGATCTGCATAAGGAGTTAGCGGGGAAGAAGTTTTTAATTGTTTTAGACGACGTTTGGAAAACGTGCAGCTACGGTGATTGGATGCAGCTGCAGTCCCCTTTTCGTGATGGAGCACAAGGAAGCAAGATAATTGTGACAACACGTGATACAGATGTTTCAAAAATGATGGGAGCTGCCAAGCTGGTTCACAATTTGGAGCCCATGGAAAATGATGTTTGTTTGCAAGTATTTGAGCAGCATGCATTCTTAAATTCTAACAACGACAAACCACCAAATTACGAGTTACTCAAGGAGAAAATTGTTGCAAAGTGTAGGGGATTGCCTTTGGCCGCGAGGACTCTCGGTGGTGTTCTACTTCGTAAAGAAACATACGAATGGGAAGAAATATTGAACAACAAACTCTGGAGTCTATCAAATGAGCCTGACATACTTCCAGTGTCATTGTTTCAAAAGTCAACCGAAAATGCTTCAAAATATGTGATGCATGACCTCATTGGTGATTTAGCACGATGGGCAGCTGGAGCAATTTGTTTTAGATTGGAGGATAAGCAAAACAATGATGGTGTACAACTTAGATGTTTTCCAAAGGCACGCCACTCGTCTTACATCAGAGGTAATTATGATGGAGTTAAAAGATTTGAGGCATTTTCTGAAGTGAAATGTTTGCGAACCTTCCTGCCAGTAAGCAAGGATTATGTTCGGGGTTATTTAAGTCGTCAGGTTACTTTTGATTTATTGCCAAAATTGCAATACTTGCGGGTGCTCTCTTTTAATGGCTATTGTATAACTGAGCTGCCAAACTCAGTCGGTGATTTAAGGTATCTACGGTATCTCGACCTTTCTTACACGTCGATTACCAGTTTACCTAAATCAACAAGCACCCTTTACAACCTGCAGACATTGATATTGGAAGGTTGTTATGAGTTGAAGTCATTGCCTGCAGACATGAGTAATCTAATTAATTTGCGCCATCTCAACAACTTAGGTGCATCTTGGTTGAAAGGAATGCCTCCAAAACTAGGTAAATTGGTGAATCTCCAATCTTTGCCTAATTTTGTGGTGAGTGGTGGTAGTAATCAATCAGGGATAAGAGAGATAGAGTTCTTGATGCATCTCCGAGGGACATTGTGCCTCTCAGGATTGGAGAATGTGACTGACGTCGAGGACGCTCGGAGGGCCAACTTAAAATGCAAGGAGAGGCTTGATTCGTTGGTCCTAGAATGGTCTCATTCAAGCGACATAAGAGAAACGGAATCCGATGTGCTTGACATGTTACAGCCTCATACATCGATCAAGGAGCTCACCATCAAGAGATATGCCGGAAAGAAATTTTCATCGTGGGTGGGATGTCCTTTGTTCTCTAATATGGTGCTTGTGCGCTTAGAGGAATGTAACGAATGTTTATCGTTGCCACCCCTCGGACAATTGCCTCATCTCAAAGAAATTTATATTGAAGGAATGAATGCAGTGGAAAGTGTTGGCACTGAGTTTTATGGAGAGTGTATCTTGCCATTTCCGCTATTAGAGACTCTTGAGTTTGTGGATATGCAGCGTTGGAAGGAATGGCTTCCTTTCCAACTGGATCGCGGAAGTGGTGTTTTCCCTTGCCTGAAAAGGCTTTCAATCAAAACATGTTCTAAGTTGGAAGGTAAGCTGCCAGAGAACCTTGATCTGTTAGCCGAGCTTGAAATTGTTAAATGCGAGGAATTGGTGGTTTCGATTGCCAACTACAAACAACTTCATCAAATAAAAATTGACGGTTGTAAAGCGTTGGTGCATACAGCTGCTAAGGTTGAGTTTGAGTTATTAGAGTCCTTGTGTCTTTCAAACATTTCGGAGTTGATGTCTCTGCAAACAGGGGAATTGTGCAGAAAGGGATTAACCAAGGTTAGAGAATTGGAGATTAATGGATGTAAGGAGCTGAAGTCTTCATTGAAGAATGAGGCTGGATTATTGCAGCAGTTGACTTCTCTTGGCCGTTTGAAGATCGAAGACAACTCTCCTCTAGTTGAAGAATTGGGAAAAGAAGCAGAGGAGTCGCAAATATTGGAGTGCAGGATTGAATGTCTGGAGTTAATCAAGTGCGAAAATCTTTTGAAGCTACCAAGGGGGTTAAATCAGTTGTCGTCTCTTCAAGAGCTTGGCTTACACAAATGTTCACATCTAGCTTCTTTTCCAGATGTTGGTCTGCCACCTTCTCTTAAAGACATCGAGATTACCGAGTGTCATTCGTTGATATATTTGGCAAATTTTCGGATTCCCCAAAATCTCGGAAAAATAGAGATAAGTGATTGCAAAAGTTTGAAATCACTAGTAGATGAGGAGGATGTTAGTTCTTGGTCGTCTTCTTGTCTTGAGCACTTGATTATCCGGAGTTGTCATTCTCTGACGTCGTTATCATTGAGTGGCCGGCTTCTCAGGACACTTAAAGGCCTGGACGTATATGATTGTGAACAACTGGAGCTAATCGCAGAGGACAGGTTCTTCCGCGACAACACCAATTATTGTCTTGAATATATTACCATCTGGAAGTGCCAAAATCTGAAATCCTTACCGGATGGCTTATGCCACCTCAGCAATCTTCAAAAGCTACGTATTTACGAATGTGGAAGTCTTGTTTCCATCCCGAGACTGAGTGGGGGGAGAAGACCCTCCAACCTGAGAGAGATCAGTATCGGAGATTGCGAGAAATTGGAGGCGTTGCCCGAAGACATGCACAATCTCAACTCTCTTGAGGATTTGACCATCGACTACCGTGAAGGTTTGACTTTTCCTCCCAACCTCACGTTTCTTGAAATTAACAAGGTCAAGAGTTGTAAGTCATTGTGGGAGTTGGAGTGGGGGTTGCACAGACTCACCTCTCTTACATACTTGGAAATCGATGGTAAAGAAGACCCGGATACGGTGTCGTTTCCACCCGACTTGGTCCGGATGGAGACGCTCCTCCCCAAATCTCTCACTCAACTCGAAATAGGTGGCTTCCCGAATCTGAAGAAACTGAGCAGTAAGGGCTTTCAATTCCTCACCTCCCTTCAATCTCTTACACTCTGCCATTGTCCAAAGCTAGCATCCATTCCAGAGGAGGGTCTGCCTCCTTCACTAGAGAGACTTGTCATCCATAGATGTCCAGTGCTAGAAGAGAGATGCCAACCAGGAAAAGGACTTAGAGGTATCATCGTACCAAGAAATGTTTTATTATTATTATTATTATTAATATTATATTCATTATTATTGTTAAGCATCTTTGGTTGGATCGATCTTCTTTTTGGCATCATGTCCACAATATTTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

1377

Amino Acids

155.5

Weight (kDa)

6.12

Isoelectric Point (pI)

46.13

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000070)

Species Orthologous Gene IDs
fragaria_vesca FvH4_7g00360 FvH4_7g00850 FvH4_7g02400 FvH4_7g02430 FvH4_7g02450 FvH4_7g25671 FvH4_7g25680 FvH4_7g25683 FvH4_7g26980 FvH4_7g27330 FvH4_7g27355 FvH4_7g27610 FvH4_7g27642 FvH4_7g27890 FvH4_7g27891 FvH4_7g27891 FvH4_7g27891 FvH4_7g28110 FvH4_7g28390
malus_domestica MD00G1070800.v1.1 MD00G1168000.v1.1 MD00G1168300.v1.1 MD00G1168700.v1.1 MD02G1293100.v1.1 MD02G1293200.v1.1 MD02G1314300.v1.1 MD03G1009000.v1.1 MD03G1009400.v1.1 MD03G1042300.v1.1 MD03G1042400.v1.1 MD07G1033600.v1.1 MD07G1033700.v1.1 MD07G1033900.v1.1 MD11G1011400.v1.1 MD11G1011700.v1.1 MD11G1029800.v1.1 MD11G1029900.v1.1 MD11G1030300.v1.1 MD11G1030400.v1.1 MD11G1030500.v1.1 MD11G1031300.v1.1 MD11G1031600.v1.1 MD11G1032000.v1.1 MD11G1033200.v1.1 MD11G1033600.v1.1 MD11G1033800.v1.1 MD11G1033900.v1.1 MD11G1034100.v1.1 MD11G1034400.v1.1 MD11G1040600.v1.1 MD11G1041100.v1.1 MD11G1043100.v1.1 MD11G1043500.v1.1 MD11G1044500.v1.1 MD11G1045100.v1.1 MD11G1045600.v1.1
prunus_persica Prupe.2G022400_v2.0.a1 Prupe.2G022400_v2.0.a1 Prupe.2G022400_v2.0.a1 Prupe.2G022500_v2.0.a1 Prupe.2G022500_v2.0.a1 Prupe.2G022900_v2.0.a1 Prupe.2G023500_v2.0.a1 Prupe.2G023500_v2.0.a1 Prupe.2G023500_v2.0.a1 Prupe.2G023500_v2.0.a1 Prupe.2G023500_v2.0.a1 Prupe.2G023500_v2.0.a1 Prupe.2G023600_v2.0.a1 Prupe.2G028000_v2.0.a1 Prupe.2G030200_v2.0.a1 Prupe.2G067600_v2.0.a1 Prupe.8G117900_v2.0.a1
pyrus_communis pycom02g26350 pycom03g03270 pycom07g02370 pycom11g00750 pycom11g00790 pycom11g02340 pycom11g02370 pycom11g02380 pycom11g02390 pycom11g02410 pycom11g02460 pycom11g02470 pycom11g02500 pycom11g02510 pycom11g02520 pycom11g02530 pycom11g02580 pycom11g02590 pycom11g02680 pycom11g02710 pycom11g02720 pycom11g02730 pycom11g02750 pycom11g02760 pycom11g02770 pycom11g03690 pycom13g25120 pycom13g25130 pycom13g25140 pycom13g25170 pycom13g25180 pycom13g25190 pycom13g25210
rosa_chinensis RchiOBHm_Chr1g0315001 RchiOBHm_Chr1g0315411 RchiOBHm_Chr1g0317951 RchiOBHm_Chr1g0319741 RchiOBHm_Chr1g0319841 RchiOBHm_Chr1g0319911 RchiOBHm_Chr1g0319991 RchiOBHm_Chr1g0320001 RchiOBHm_Chr1g0320021 RchiOBHm_Chr1g0320081 RchiOBHm_Chr1g0320111 RchiOBHm_Chr1g0320131 RchiOBHm_Chr1g0320161 RchiOBHm_Chr1g0320171 RchiOBHm_Chr1g0320241 RchiOBHm_Chr1g0320281 RchiOBHm_Chr1g0320411 RchiOBHm_Chr1g0320461 RchiOBHm_Chr1g0320551 RchiOBHm_Chr1g0320581 RchiOBHm_Chr1g0320661 RchiOBHm_Chr1g0320891 RchiOBHm_Chr1g0320971 RchiOBHm_Chr1g0321021 RchiOBHm_Chr1g0321031 RchiOBHm_Chr1g0321091 RchiOBHm_Chr1g0321351 RchiOBHm_Chr1g0321481 RchiOBHm_Chr1g0321491 RchiOBHm_Chr1g0327521 RchiOBHm_Chr1g0328061 RchiOBHm_Chr1g0334991 RchiOBHm_Chr1g0373781 RchiOBHm_Chr1g0373891 RchiOBHm_Chr1g0374841 RchiOBHm_Chr2g0131111 RchiOBHm_Chr2g0131121 RchiOBHm_Chr4g0408901 RchiOBHm_Chr5g0041691 RchiOBHm_Chr7g0237021
rosa_laevigata RLG00000019168 RLG00000030456 RLG00000030460 RLG00000030571
rosa_multiflora Rmu_co7963468.1_g000001 Rmu_co7991248.1_g000001 Rmu_co8195256.1_g000001 Rmu_co8312199.1_g000001 Rmu_co8349215.1_g000001 Rmu_co8351041.1_g000001 Rmu_co8422719.1_g000001 Rmu_co8450711.1_g000001 Rmu_co8465555.1_g000001 Rmu_co8489965.1_g000001 Rmu_sc0000087.1_g000014 Rmu_sc0000272.1_g000015 Rmu_sc0000724.1_g000006 Rmu_sc0000724.1_g000021 Rmu_sc0000724.1_g000022 Rmu_sc0000861.1_g000024 Rmu_sc0001049.1_g000006 Rmu_sc0001049.1_g000007 Rmu_sc0001512.1_g000001 Rmu_sc0002022.1_g000004 Rmu_sc0002063.1_g000011 Rmu_sc0002131.1_g000024 Rmu_sc0002337.1_g000012 Rmu_sc0002341.1_g000005 Rmu_sc0002539.1_g000117 Rmu_sc0002745.1_g000005 Rmu_sc0002745.1_g000006 Rmu_sc0003145.1_g000002 Rmu_sc0003199.1_g000007 Rmu_sc0003270.1_g000039 Rmu_sc0003270.1_g000040 Rmu_sc0003423.1_g000001 Rmu_sc0003423.1_g000002 Rmu_sc0003629.1_g000067 Rmu_sc0004039.1_g000002 Rmu_sc0004555.1_g000001 Rmu_sc0004555.1_g000005 Rmu_sc0004555.1_g000006 Rmu_sc0004947.1_g000025 Rmu_sc0004947.1_g000026 Rmu_sc0005255.1_g000025 Rmu_sc0007977.1_g000016 Rmu_sc0008752.1_g000005 Rmu_sc0009236.1_g000004 Rmu_sc0009236.1_g000008 Rmu_sc0009236.1_g000009 Rmu_sc0009236.1_g000010 Rmu_sc0011424.1_g000036 Rmu_sc0013413.1_g000001 Rmu_sc0013735.1_g000002 Rmu_sc0015304.1_g000002 Rmu_sc0015304.1_g000003 Rmu_sc0015585.1_g000001 Rmu_sc0018410.1_g000001 Rmu_sc0022723.1_g000001 Rmu_sc0022723.1_g000002 Rmu_sc0022724.1_g000001 Rmu_sc0023430.1_g000001 Rmu_sc0026053.1_g000001 Rmu_sc0026429.1_g000002 Rmu_sc0026647.1_g000001 Rmu_sc0031359.1_g000001 Rmu_ssc0000042.1_g000040 Rmu_ssc0000081.1_g000001 Rmu_ssc0000300.1_g000011
rosa_roxburghii Rroxscaffold_160G00433620 Rroxscaffold_160G00433990 Rroxscaffold_1G00038820 Rroxscaffold_2G00113190 Rroxscaffold_4G00283240 Rroxscaffold_4G00283930 Rroxscaffold_4G00284010 Rroxscaffold_4G00322600 Rroxscaffold_4G00327710 Rroxscaffold_4G00328100 Rroxscaffold_4G00328130 Rroxscaffold_4G00331590 Rroxscaffold_5G00353280
rosa_rugosa Rorug01G0004200 Rorug01G0018800 Rorug01G0018900 Rorug01G0029900 Rorug01G0030000 Rorug01G0030000 Rorug01G0030000 Rorug01G0030200 Rorug01G0030300 Rorug01G0030800 Rorug01G0032400 Rorug01G0032900 Rorug01G0055800 Rorug01G0067600 Rorug01G0067700 Rorug01G0067800 Rorug01G0067900 Rorug01G0068000 Rorug01G0379500 Rorug01G0379600 Rorug01G0379600 Rorug01G0385200 Rorug01G0385300 Rorug02G0295100 Rorug04G0088500 Rorug04G0088600 Rorug05G0194900 Rorug07G0301400
rosa_samantha Rh1AG014800 Rh1AG015200 Rh1AG030500 Rh1AG041800 Rh1AG042300 Rh1AG042700 Rh1AG042800 Rh1AG042900 Rh1AG045000 Rh1AG085100 Rh1AG085200 Rh1AG388600 Rh1AG396700 Rh1AG396900 Rh1BG007300 Rh1BG039200 Rh1BG039600 Rh1BG042800 Rh1BG067300 Rh1BG109700 Rh1BG109900 Rh1BG354000 Rh1CG043800 Rh1CG044400 Rh1DG008600 Rh1DG022900 Rh1DG023400 Rh1DG023600 Rh1DG023900 Rh1DG024100 Rh1DG024400 Rh1DG024500 Rh1DG025500 Rh1DG025700 Rh1DG026500 Rh1DG026800 Rh1DG038900 Rh1DG048800 Rh1DG049300 Rh1DG051700 Rh1DG052000 Rh1DG146200 Rh1DG383500 Rh2BG354900 Rh2CG333600 Rh4BG149600 Rh4BG149700 Rh4CG160600
rosa_wichuraiana Rw0G001100 Rw0G001130 Rw0G001180 Rw0G012580 Rw1G003480 Rw1G003540 Rw1G003600 Rw1G003640 Rw1G003670 Rw1G003750 Rw1G003940 Rw1G006650 Rw1G034550 Rw1G034560 Rw1G034650 Rw1G034660 Rw1G035170 Rw1G035190 Rw1G037060 Rw2G028210 Rw4G012540 Rw5G026370 Rw7G037900

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 3 cut(s) 500, 2001, 3233
Acc36I ACCTGC 1 cut(s) 1740
AccB1I GGYRCC 1 cut(s) 125
AccB7I CCANNNNNTGG 2 cut(s) 40, 3023
AccI GTMKAC 1 cut(s) 500
AccII CGCG 3 cut(s) 1172, 2427, 3330
AccIII TCCGGA 2 cut(s) 3210, 3768
AciI CCGC 7 cut(s) 5, 860, 1170, 1597, 2357, 2427, 3328
AclI AACGTT 1 cut(s) 716
AclWI GGATC 2 cut(s) 2430, 4100
AcoI YGGCCR 3 cut(s) 1167, 2815, 3247
AcsI RAATTY 6 cut(s) 350, 780, 1090, 2168, 2283, 3088
AcuI CTGAAG 5 cut(s) 131, 218, 1512, 2783, 3851
AcvI CACGTG 1 cut(s) 983
AcyI GRCGYC 5 cut(s) 96, 159, 497, 1998, 3230
AfaI GTAC 4 cut(s) 77, 690, 1407, 4020
AfiI CCNNNNNNNGG 9 cut(s) 40, 168, 560, 1859, 2258, 3023, 3742, 3923, 3998
AflIII ACRYGT 5 cut(s) 246, 980, 1686, 2109, 2471
AhlI ACTAGT 1 cut(s) 3151
AjiI CACGTC 3 cut(s) 247, 798, 1689
AjnI CCWGG 2 cut(s) 3273, 3991
Alw21I GWGCWC 4 cut(s) 955, 1605, 2142, 3201
Alw26I GTCTC 8 cut(s) 804, 2070, 2360, 2691, 2973, 3463, 3770, 3940
AlwI GGATC 2 cut(s) 2430, 4100
Ama87I CYCGRG 1 cut(s) 3466
Aor13HI TCCGGA 2 cut(s) 3210, 3768
AoxI GGCC 5 cut(s) 1167, 2016, 2815, 3247, 3271
ApoI RAATTY 6 cut(s) 350, 780, 1090, 2168, 2283, 3088
ArsI GACNNNNNNTTYG 2 cut(s) 215, 247
AseI ATTAAT 3 cut(s) 1800, 2745, 4052
Asp700I GAANNNNTTC 1 cut(s) 2406
AspLEI GCGC 3 cut(s) 58, 1809, 2220
AspS9I GGNCC 4 cut(s) 551, 2016, 2053, 3766
AsuC2I CCSGG 1 cut(s) 3737
AsuHPI GGTGA 8 cut(s) 926, 1349, 1661, 1882, 1912, 2134, 3688, 3856
AsuNHI GCTAGC 1 cut(s) 3904
AvaI CYCGRG 1 cut(s) 3466
AvaII GGWCC 3 cut(s) 551, 2053, 3766
BaeGI GKGCMC 1 cut(s) 514
BaeI ACNNNNGTAYC 2 cut(s) 978, 1011
BanI GGYRCC 1 cut(s) 125
BanII GRGCYC 2 cut(s) 1041, 2142
BbrPI CACGTG 1 cut(s) 983
BbsI GAAGAC 8 cut(s) 61, 249, 2760, 2838, 3177, 3493, 3555, 3738
Bbv12I GWGCWC 4 cut(s) 955, 1605, 2142, 3201
BbvCI CCTCAGC 1 cut(s) 3413
BceAI ACGGC 2 cut(s) 195, 2802
BcgI CGANNNNNNTGC 6 cut(s) 620, 654, 1419, 1453, 2859, 2893
BciT130I CCWGG 2 cut(s) 3275, 3993
BciVI GTATCC 1 cut(s) 3733
BcnI CCSGG 1 cut(s) 3737
BcoDI GTCTC 8 cut(s) 804, 2070, 2360, 2691, 2973, 3463, 3770, 3940
BcuI ACTAGT 1 cut(s) 3151
BfaI CTAG 9 cut(s) 531, 1859, 2057, 2846, 3005, 3152, 3905, 3941, 3974
BfmI CTRYAG 3 cut(s) 929, 1733, 1779
BfuAI ACCTGC 1 cut(s) 1740
BfuI GTATCC 1 cut(s) 3733
BmcAI AGTACT 2 cut(s) 77, 690
Bme1390I CCNGG 3 cut(s) 3275, 3737, 3993
Bme18I GGWCC 3 cut(s) 551, 2053, 3766
BmeT110I CYCGRG 1 cut(s) 3466
BmgBI CACGTC 3 cut(s) 247, 798, 1689
BmgT120I GGNCC 4 cut(s) 551, 2016, 2053, 3766
BmiI GGNNCC 2 cut(s) 127, 1038
BmrFI CCNGG 3 cut(s) 3275, 3737, 3993
BmtI GCTAGC 1 cut(s) 3908
BoxI GACNNNNGTC 1 cut(s) 1997
BpiI GAAGAC 8 cut(s) 61, 249, 2760, 2838, 3177, 3493, 3555, 3738
BpmI CTGGAG 5 cut(s) 678, 1264, 1380, 2930, 3320
Bpu10I CCTNAGC 2 cut(s) 2628, 3413
BpuEI CTTGAG 4 cut(s) 1112, 2393, 3215, 3593
BpuMI CCSGG 1 cut(s) 3737
Bsa29I ATCGAT 3 cut(s) 2129, 3720, 4095
BsaAI YACGTR 2 cut(s) 983, 3434
BsaBI GATNNNNATC 1 cut(s) 3512
BsaHI GRCGYC 5 cut(s) 96, 159, 497, 1998, 3230
BsaI GGTCTC 1 cut(s) 2070
BsaJI CCNNGG 7 cut(s) 162, 760, 1041, 1957, 2257, 2724, 2945
BsaWI WCCGGW 3 cut(s) 3210, 3394, 3768
Bsc4I CCNNNNNNNGG 9 cut(s) 40, 168, 560, 1859, 2258, 3023, 3742, 3923, 3998
Bse118I RCCGGY 1 cut(s) 3249
Bse1I ACTGG 7 cut(s) 537, 1274, 1520, 1698, 2424, 3303, 3968
Bse3DI GCAATG 2 cut(s) 812, 1772
Bse8I GATNNNNATC 1 cut(s) 3512
BseAI TCCGGA 2 cut(s) 3210, 3768
BseBI CCWGG 2 cut(s) 3275, 3993
BseCI ATCGAT 3 cut(s) 2129, 3720, 4095
BseDI CCNNGG 7 cut(s) 162, 760, 1041, 1957, 2257, 2724, 2945
BseJI GATNNNNATC 1 cut(s) 3512
BseLI CCNNNNNNNGG 9 cut(s) 40, 168, 560, 1859, 2258, 3023, 3742, 3923, 3998
BseMI GCAATG 2 cut(s) 812, 1772
BseNI ACTGG 7 cut(s) 537, 1274, 1520, 1698, 2424, 3303, 3968
BseRI GAGGAG 5 cut(s) 2832, 2888, 3176, 3773, 3935
BseSI GKGCMC 1 cut(s) 514
BsgI GTGCAG 4 cut(s) 289, 925, 2728, 2914
Bsh1236I CGCG 3 cut(s) 1172, 2427, 3330
BshFI GGCC 5 cut(s) 1169, 2018, 2817, 3249, 3273
BshNI GGYRCC 1 cut(s) 125
BshVI ATCGAT 3 cut(s) 2129, 3720, 4095
BsiHKAI GWGCWC 4 cut(s) 955, 1605, 2142, 3201
BsiHKCI CYCGRG 1 cut(s) 3466
BsiSI CCGG 6 cut(s) 2160, 3211, 3250, 3395, 3737, 3769
BslFI GGGAC 3 cut(s) 236, 919, 1975
BslI CCNNNNNNNGG 9 cut(s) 40, 168, 560, 1859, 2258, 3023, 3742, 3923, 3998
BsmAI GTCTC 8 cut(s) 804, 2070, 2360, 2691, 2973, 3463, 3770, 3940
BsmBI CGTCTC 3 cut(s) 804, 2973, 3770
BsmFI GGGAC 3 cut(s) 236, 919, 1975
BsmI GAATGC 4 cut(s) 26, 1082, 1851, 2308
BsnI GGCC 5 cut(s) 1169, 2018, 2817, 3249, 3273
Bso31I GGTCTC 1 cut(s) 2070
BsoBI CYCGRG 1 cut(s) 3466
Bsp1286I GDGCHC 6 cut(s) 514, 955, 1041, 1605, 2142, 3201
Bsp13I TCCGGA 2 cut(s) 3210, 3768
Bsp1407I TGTACA 1 cut(s) 1405
Bsp19I CCATGG 1 cut(s) 1041
BspACI CCGC 7 cut(s) 5, 860, 1170, 1597, 2357, 2427, 3328
BspANI GGCC 5 cut(s) 1169, 2018, 2817, 3249, 3273
BspDI ATCGAT 3 cut(s) 2129, 3720, 4095
BspEI TCCGGA 2 cut(s) 3210, 3768
BspFNI CGCG 3 cut(s) 1172, 2427, 3330
BspLI GGNNCC 2 cut(s) 127, 1038
BspMAI CTGCAG 3 cut(s) 933, 1737, 1783
BspMI ACCTGC 1 cut(s) 1740
BspOI GCTAGC 1 cut(s) 3908
BspPI GGATC 2 cut(s) 2430, 4100
BspT107I GGYRCC 1 cut(s) 125
BspTNI GGTCTC 1 cut(s) 2070
BsrDI GCAATG 2 cut(s) 812, 1772
BsrFI RCCGGY 1 cut(s) 3249
BsrGI TGTACA 1 cut(s) 1405
BsrI ACTGG 7 cut(s) 537, 1274, 1520, 1698, 2424, 3303, 3968
BssAI RCCGGY 1 cut(s) 3249
BssECI CCNNGG 7 cut(s) 162, 760, 1041, 1957, 2257, 2724, 2945
BssNI GRCGYC 5 cut(s) 96, 159, 497, 1998, 3230
BssT1I CCWWGG 4 cut(s) 760, 1041, 2724, 2945
Bst2UI CCWGG 2 cut(s) 3275, 3993
Bst4CI ACNGT 5 cut(s) 914, 1668, 2600, 3596, 3745
Bst6I CTCTTC 3 cut(s) 760, 2976, 3972
BstACI GRCGYC 5 cut(s) 96, 159, 497, 1998, 3230
BstAPI GCANNNNNTGC 1 cut(s) 1594
BstAUI TGTACA 1 cut(s) 1405
BstBAI YACGTR 2 cut(s) 983, 3434
BstC8I GCNNGC 6 cut(s) 514, 1080, 1432, 1779, 3251, 3906
BstDSI CCRYGG 1 cut(s) 1041
BstFNI CGCG 3 cut(s) 1172, 2427, 3330
BstHHI GCGC 3 cut(s) 58, 1809, 2220
BstMAI GTCTC 8 cut(s) 804, 2070, 2360, 2691, 2973, 3463, 3770, 3940
BstNI CCWGG 2 cut(s) 3275, 3993
BstNSI RCATGY 5 cut(s) 296, 1082, 2113, 2475, 3556
BstPAI GACNNNNGTC 1 cut(s) 1997
BstSCI CCNGG 3 cut(s) 3273, 3735, 3991
BstSFI CTRYAG 3 cut(s) 929, 1733, 1779
BstSLI GKGCMC 1 cut(s) 514
BstSNI TACGTA 1 cut(s) 3434
BstUI CGCG 3 cut(s) 1172, 2427, 3330
BstV2I GAAGAC 8 cut(s) 61, 249, 2760, 2838, 3177, 3493, 3555, 3738
BstXI CCANNNNNNTGG 1 cut(s) 732
Bsu15I ATCGAT 3 cut(s) 2129, 3720, 4095
BsuI GTATCC 1 cut(s) 3733
BsuRI GGCC 5 cut(s) 1169, 2018, 2817, 3249, 3273
BsuTUI ATCGAT 3 cut(s) 2129, 3720, 4095
BtgI CCRYGG 1 cut(s) 1041
BtrI CACGTC 3 cut(s) 247, 798, 1689
BtsI GCAGTG 2 cut(s) 153, 2313
BtsIMutI CAGTG 6 cut(s) 153, 194, 1281, 2313, 2322, 3975
BveI ACCTGC 1 cut(s) 1740
Cac8I GCNNGC 6 cut(s) 514, 1080, 1432, 1779, 3251, 3906
CfoI GCGC 3 cut(s) 58, 1809, 2220
Cfr10I RCCGGY 1 cut(s) 3249
Cfr13I GGNCC 4 cut(s) 551, 2016, 2053, 3766
ClaI ATCGAT 3 cut(s) 2129, 3720, 4095
CseI GACGC 4 cut(s) 85, 167, 2015, 3787
Csp6I GTAC 4 cut(s) 76, 689, 1406, 4019
CspCI CAANNNNNGTGG 2 cut(s) 3744, 3779
CviQI GTAC 4 cut(s) 76, 689, 1406, 4019
EaeI YGGCCR 3 cut(s) 1167, 2815, 3247
Eam1104I CTCTTC 3 cut(s) 760, 2976, 3972
EarI CTCTTC 3 cut(s) 760, 2976, 3972
Ecl136II GAGCTC 1 cut(s) 2140
Eco105I TACGTA 1 cut(s) 3434
Eco130I CCWWGG 4 cut(s) 760, 1041, 2724, 2945
Eco147I AGGCCT 1 cut(s) 3273
Eco24I GRGCYC 2 cut(s) 1041, 2142
Eco31I GGTCTC 1 cut(s) 2070
Eco32I GATATC 2 cut(s) 378, 453
Eco47I GGWCC 3 cut(s) 551, 2053, 3766
Eco53kI GAGCTC 1 cut(s) 2140
Eco57I CTGAAG 5 cut(s) 131, 218, 1512, 2783, 3851
Eco72I CACGTG 1 cut(s) 983
Eco88I CYCGRG 1 cut(s) 3466
EcoICRI GAGCTC 1 cut(s) 2140
EcoRII CCWGG 2 cut(s) 3273, 3991
EcoRV GATATC 2 cut(s) 378, 453
EcoT14I CCWWGG 4 cut(s) 760, 1041, 2724, 2945
EcoT22I ATGCAT 3 cut(s) 1084, 1326, 1953
EcoT38I GRGCYC 2 cut(s) 1041, 2142
ErhI CCWWGG 4 cut(s) 760, 1041, 2724, 2945
Esp3I CGTCTC 3 cut(s) 804, 2973, 3770
FalI AAGNNNNNCTT 2 cut(s) 456, 488
FaqI GGGAC 3 cut(s) 236, 919, 1975
FauI CCCGC 2 cut(s) 853, 1590
FblI GTMKAC 1 cut(s) 500
FriOI GRGCYC 2 cut(s) 1041, 2142
FspBI CTAG 9 cut(s) 531, 1859, 2057, 2846, 3005, 3152, 3905, 3941, 3974
GlaI GCGC 3 cut(s) 57, 1808, 2219
GsuI CTGGAG 5 cut(s) 678, 1264, 1380, 2930, 3320
HaeIII GGCC 5 cut(s) 1169, 2018, 2817, 3249, 3273
HapII CCGG 6 cut(s) 2160, 3211, 3250, 3395, 3737, 3769
HgaI GACGC 4 cut(s) 85, 167, 2015, 3787
HhaI GCGC 3 cut(s) 58, 1809, 2220
Hin1I GRCGYC 5 cut(s) 96, 159, 497, 1998, 3230
Hin6I GCGC 3 cut(s) 56, 1807, 2218
HinP1I GCGC 3 cut(s) 56, 1807, 2218
HincII GTYRAC 5 cut(s) 46, 501, 542, 1296, 2805
HindII GTYRAC 5 cut(s) 46, 501, 542, 1296, 2805
HpaII CCGG 6 cut(s) 2160, 3211, 3250, 3395, 3737, 3769
HphI GGTGA 8 cut(s) 926, 1349, 1661, 1882, 1912, 2134, 3688, 3856
Hpy99I CGWCG 7 cut(s) 101, 499, 502, 893, 1693, 2003, 3235
HpyCH4III ACNGT 5 cut(s) 914, 1668, 2600, 3596, 3745
Hsp92I GRCGYC 5 cut(s) 96, 159, 497, 1998, 3230
HspAI GCGC 3 cut(s) 56, 1807, 2218
Kpn2I TCCGGA 2 cut(s) 3210, 3768
KroI GCCGGC 1 cut(s) 3249
KroNI GCCGGC 1 cut(s) 3251
LmnI GCTCC 9 cut(s) 143, 950, 1010, 1036, 1361, 2137, 2758, 3301, 3786
MaeI CTAG 9 cut(s) 531, 1859, 2057, 2846, 3005, 3152, 3905, 3941, 3974
MaeIII GTNAC 7 cut(s) 769, 973, 1122, 1561, 1990, 2112, 2231
MfeI CAATTG 2 cut(s) 642, 2264
MhlI GDGCHC 6 cut(s) 514, 955, 1041, 1605, 2142, 3201
MlyI GAGTC 8 cut(s) 78, 669, 1171, 1255, 2362, 2660, 2885, 3687
MmeI TCCRAC 9 cut(s) 231, 423, 643, 2375, 2440, 2463, 3519, 3654, 4070
Mph1103I ATGCAT 3 cut(s) 1084, 1326, 1953
MroI TCCGGA 2 cut(s) 3210, 3768
MroNI GCCGGC 1 cut(s) 3249
MroXI GAANNNNTTC 1 cut(s) 2406
MslI CAYNNNNRTG 1 cut(s) 1213
MspA1I CMGCKG 4 cut(s) 728, 928, 1358, 2624
MspI CCGG 6 cut(s) 2160, 3211, 3250, 3395, 3737, 3769
MspR9I CCNGG 3 cut(s) 3275, 3737, 3993
MunI CAATTG 2 cut(s) 642, 2264
Mva1269I GAATGC 4 cut(s) 26, 1082, 1851, 2308
MvaI CCWGG 2 cut(s) 3275, 3993
MvnI CGCG 3 cut(s) 1172, 2427, 3330
NaeI GCCGGC 1 cut(s) 3251
NciI CCSGG 1 cut(s) 3737
NcoI CCATGG 1 cut(s) 1041
NgoMIV GCCGGC 1 cut(s) 3249
NheI GCTAGC 1 cut(s) 3904
NlaIV GGNNCC 2 cut(s) 127, 1038
NmeAIII GCCGAG 3 cut(s) 187, 781, 2545
NmuCI GTSAC 3 cut(s) 769, 973, 1990
NsiI ATGCAT 3 cut(s) 1084, 1326, 1953
NspI RCATGY 5 cut(s) 296, 1082, 2113, 2475, 3556
PaeI GCATGC 1 cut(s) 1082
PceI AGGCCT 1 cut(s) 3273
PciI ACATGT 2 cut(s) 2109, 2471
PcsI WCGNNNNNNNCGW 3 cut(s) 93, 3057, 3522
PctI GAATGC 4 cut(s) 26, 1082, 1851, 2308
PdiI GCCGGC 1 cut(s) 3251
PdmI GAANNNNTTC 1 cut(s) 2406
PfeI GAWTC 6 cut(s) 788, 1873, 2045, 2093, 3097, 3826
PflFI GACNNNGTC 1 cut(s) 3764
PflMI CCANNNNNTGG 2 cut(s) 40, 3023
PleI GAGTC 8 cut(s) 78, 668, 1171, 1254, 2362, 2659, 2884, 3687
PmaCI CACGTG 1 cut(s) 983
PmlI CACGTG 1 cut(s) 983
PpsI GAGTC 8 cut(s) 78, 668, 1171, 1254, 2362, 2659, 2884, 3687
Ppu21I YACGTR 2 cut(s) 983, 3434
PscI ACATGT 2 cut(s) 2109, 2471
PshAI GACNNNNGTC 1 cut(s) 1997
PshBI ATTAAT 3 cut(s) 1800, 2745, 4052
Psp124BI GAGCTC 1 cut(s) 2142
Psp1406I AACGTT 1 cut(s) 716
Psp6I CCWGG 2 cut(s) 3273, 3991
PspCI CACGTG 1 cut(s) 983
PspGI CCWGG 2 cut(s) 3273, 3991
PspN4I GGNNCC 2 cut(s) 127, 1038
PspPI GGNCC 4 cut(s) 551, 2016, 2053, 3766
PstI CTGCAG 3 cut(s) 933, 1737, 1783
PsyI GACNNNGTC 1 cut(s) 3764
PvuII CAGCTG 4 cut(s) 728, 928, 1358, 2624
RsaI GTAC 4 cut(s) 77, 690, 1407, 4020
RsaNI GTAC 4 cut(s) 76, 689, 1406, 4019
RseI CAYNNNNRTG 1 cut(s) 1213
SacI GAGCTC 1 cut(s) 2142
SalI GTCGAC 1 cut(s) 499
Sau96I GGNCC 4 cut(s) 551, 2016, 2053, 3766
ScaI AGTACT 2 cut(s) 77, 690
SchI GAGTC 8 cut(s) 78, 669, 1171, 1255, 2362, 2660, 2885, 3687
ScrFI CCNGG 3 cut(s) 3275, 3737, 3993
SduI GDGCHC 6 cut(s) 514, 955, 1041, 1605, 2142, 3201
SfcI CTRYAG 3 cut(s) 929, 1733, 1779
SinI GGWCC 3 cut(s) 551, 2053, 3766
SmiMI CAYNNNNRTG 1 cut(s) 1213
SmlI CTYRAG 4 cut(s) 1127, 2372, 3194, 3572
SmoI CTYRAG 4 cut(s) 1127, 2372, 3194, 3572
SnaBI TACGTA 1 cut(s) 3434
SpeI ACTAGT 1 cut(s) 3151
SphI GCATGC 1 cut(s) 1082
SseBI AGGCCT 1 cut(s) 3273
SsiI CCGC 7 cut(s) 5, 860, 1170, 1597, 2357, 2427, 3328
SspI AATATT 4 cut(s) 1227, 2886, 4056, 4125
SspMI CTAG 9 cut(s) 531, 1859, 2057, 2846, 3005, 3152, 3905, 3941, 3974
SstI GAGCTC 1 cut(s) 2142
StuI AGGCCT 1 cut(s) 3273
StyD4I CCNGG 3 cut(s) 3273, 3735, 3991
StyI CCWWGG 4 cut(s) 760, 1041, 2724, 2945
TaaI ACNGT 5 cut(s) 914, 1668, 2600, 3596, 3745
TatI WGTACW 3 cut(s) 75, 688, 1405
TauI GCSGC 1 cut(s) 1172
TfiI GAWTC 6 cut(s) 788, 1873, 2045, 2093, 3097, 3826
TscAI CASTG 6 cut(s) 153, 201, 1281, 2313, 2329, 3975
TseFI GTSAC 3 cut(s) 769, 973, 1990
Tsp45I GTSAC 3 cut(s) 769, 973, 1990
TspDTI ATGAA 6 cut(s) 425, 2163, 2315, 2570, 2760, 4053
TspGWI ACGGA 1 cut(s) 2105
TspRI CASTG 6 cut(s) 153, 201, 1281, 2313, 2329, 3975
Tth111I GACNNNGTC 1 cut(s) 3764
Van91I CCANNNNNTGG 2 cut(s) 40, 3023
VpaK11BI GGWCC 3 cut(s) 551, 2053, 3766
VspI ATTAAT 3 cut(s) 1800, 2745, 4052
XapI RAATTY 6 cut(s) 350, 780, 1090, 2168, 2283, 3088
XceI RCATGY 5 cut(s) 296, 1082, 2113, 2475, 3556
XmiI GTMKAC 1 cut(s) 500
XmnI GAANNNNTTC 1 cut(s) 2406
XspI CTAG 9 cut(s) 531, 1859, 2057, 2846, 3005, 3152, 3905, 3941, 3974
ZraI GACGTC 3 cut(s) 498, 1999, 3231
ZrmI AGTACT 2 cut(s) 77, 690
Zsp2I ATGCAT 3 cut(s) 1084, 1326, 1953
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.