disease resistance
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| RPW8 | PF05659 | 3 - 131 | 5.1e-13 | Arabidopsis broad-spectrum mildew resistance protein RPW8 |
| NB-ARC | PF00931 | 217 - 354 | 3.5e-18 | NB-ARC domain |
| AAA_22 | PF13401 | 233 - 329 | 8.8e-07 | AAA domain |
| nSTAND6 | PF25201 | 233 - 312 | 8.5e-06 | Novel STAND NTPase 6 |
| LRR_14 | PF23598 | 703 - 842 | 4.3e-13 | Leucine-rich repeat region |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 2 cut(s) | 1620, 1927 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 703, 1531 |
| AccI | GTMKAC | 1 cut(s) | 2032 |
| AccIII | TCCGGA | 1 cut(s) | 495 |
| AciI | CCGC | 4 cut(s) | 220, 444, 1164, 1466 |
| AclWI | GGATC | 4 cut(s) | 487, 720, 733, 1003 |
| AcoI | YGGCCR | 1 cut(s) | 1626 |
| AcsI | RAATTY | 5 cut(s) | 1001, 1303, 1458, 1828, 2506 |
| AcuI | CTGAAG | 3 cut(s) | 1733, 1985, 2397 |
| AdeI | CACNNNGTG | 1 cut(s) | 1253 |
| AfaI | GTAC | 3 cut(s) | 781, 872, 1298 |
| AfeI | AGCGCT | 1 cut(s) | 1205 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 83, 703, 1531 |
| AflII | CTTAAG | 2 cut(s) | 1010, 2465 |
| AjiI | CACGTC | 1 cut(s) | 2335 |
| AjnI | CCWGG | 7 cut(s) | 168, 198, 991, 1075, 1271, 1855, 2051 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 233, 265, 725, 757 |
| Alw21I | GWGCWC | 3 cut(s) | 239, 825, 1518 |
| Alw26I | GTCTC | 4 cut(s) | 521, 1319, 2280, 2413 |
| AlwI | GGATC | 4 cut(s) | 487, 720, 733, 1003 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 1328 |
| Aor13HI | TCCGGA | 1 cut(s) | 495 |
| Aor51HI | AGCGCT | 1 cut(s) | 1205 |
| AoxI | GGCC | 5 cut(s) | 205, 445, 989, 1626, 1842 |
| ApeKI | GCWGC | 4 cut(s) | 928, 1206, 1353, 1445 |
| ApoI | RAATTY | 5 cut(s) | 1001, 1303, 1458, 1828, 2506 |
| AseI | ATTAAT | 1 cut(s) | 606 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 542, 1005, 2442 |
| AspA2I | CCTAGG | 1 cut(s) | 82 |
| AspLEI | GCGC | 1 cut(s) | 1206 |
| AspS9I | GGNCC | 3 cut(s) | 205, 1405, 1648 |
| AsuC2I | CCSGG | 1 cut(s) | 730 |
| AsuHPI | GGTGA | 5 cut(s) | 482, 1066, 1265, 2399, 2557 |
| AsuII | TTCGAA | 2 cut(s) | 815, 1502 |
| AvaII | GGWCC | 2 cut(s) | 1405, 1648 |
| AvrII | CCTAGG | 1 cut(s) | 82 |
| AxyI | CCTNAGG | 1 cut(s) | 2363 |
| BaeGI | GKGCMC | 1 cut(s) | 2083 |
| BalI | TGGCCA | 1 cut(s) | 1628 |
| BamHI | GGATCC | 1 cut(s) | 725 |
| BanII | GRGCYC | 3 cut(s) | 825, 1518, 2520 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 447, 479 |
| BbsI | GAAGAC | 5 cut(s) | 677, 710, 1874, 1973, 2385 |
| Bbv12I | GWGCWC | 3 cut(s) | 239, 825, 1518 |
| BbvCI | CCTCAGC | 1 cut(s) | 2267 |
| BbvI | GCAGC | 4 cut(s) | 915, 1193, 1365, 1432 |
| BccI | CCATC | 5 cut(s) | 86, 127, 1372, 1501, 2009 |
| BciT130I | CCWGG | 7 cut(s) | 170, 200, 993, 1077, 1273, 1857, 2053 |
| BciVI | GTATCC | 1 cut(s) | 1375 |
| BcnI | CCSGG | 1 cut(s) | 730 |
| BcoDI | GTCTC | 4 cut(s) | 521, 1319, 2280, 2413 |
| BfmI | CTRYAG | 5 cut(s) | 464, 1207, 1582, 2033, 2173 |
| BfoI | RGCGCY | 1 cut(s) | 1207 |
| BfrI | CTTAAG | 2 cut(s) | 1010, 2465 |
| BfuAI | ACCTGC | 2 cut(s) | 1620, 1927 |
| BfuI | GTATCC | 1 cut(s) | 1375 |
| BglII | AGATCT | 2 cut(s) | 676, 1960 |
| BisI | GCNGC | 5 cut(s) | 445, 929, 1207, 1354, 1446 |
| BlnI | CCTAGG | 1 cut(s) | 82 |
| BlpI | GCTNAGC | 1 cut(s) | 824 |
| BlsI | GCNGC | 5 cut(s) | 446, 930, 1208, 1355, 1447 |
| Bme1390I | CCNGG | 8 cut(s) | 170, 200, 730, 993, 1077, 1273, 1857, 2053 |
| Bme18I | GGWCC | 2 cut(s) | 1405, 1648 |
| BmgBI | CACGTC | 1 cut(s) | 2335 |
| BmgT120I | GGNCC | 3 cut(s) | 205, 1405, 1648 |
| BmiI | GGNNCC | 5 cut(s) | 695, 727, 1650, 1912, 2517 |
| BmrFI | CCNGG | 8 cut(s) | 170, 200, 730, 993, 1077, 1273, 1857, 2053 |
| BmrI | ACTGGG | 1 cut(s) | 1646 |
| BmsI | GCATC | 3 cut(s) | 1157, 1477, 2092 |
| BmuI | ACTGGG | 1 cut(s) | 1646 |
| BpiI | GAAGAC | 5 cut(s) | 677, 710, 1874, 1973, 2385 |
| BpmI | CTGGAG | 1 cut(s) | 221 |
| Bpu10I | CCTNAGC | 2 cut(s) | 2267, 2273 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 824 |
| Bpu14I | TTCGAA | 2 cut(s) | 815, 1502 |
| BpuEI | CTTGAG | 3 cut(s) | 302, 308, 2377 |
| BpuMI | CCSGG | 1 cut(s) | 730 |
| BsaJI | CCNNGG | 3 cut(s) | 82, 1272, 1408 |
| BsaWI | WCCGGW | 1 cut(s) | 495 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 825, 855 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 83, 703, 1531 |
| Bse1I | ACTGG | 7 cut(s) | 456, 718, 1652, 1733, 1790, 1950, 2439 |
| Bse21I | CCTNAGG | 1 cut(s) | 2363 |
| Bse3DI | GCAATG | 1 cut(s) | 2149 |
| BseAI | TCCGGA | 1 cut(s) | 495 |
| BseBI | CCWGG | 7 cut(s) | 170, 200, 993, 1077, 1273, 1857, 2053 |
| BseDI | CCNNGG | 3 cut(s) | 82, 1272, 1408 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 83, 703, 1531 |
| BseMI | GCAATG | 1 cut(s) | 2149 |
| BseMII | CTCAG | 7 cut(s) | 838, 873, 1335, 2212, 2258, 2462, 2548 |
| BseNI | ACTGG | 7 cut(s) | 456, 718, 1652, 1733, 1790, 1950, 2439 |
| BseRI | GAGGAG | 1 cut(s) | 1247 |
| BseSI | GKGCMC | 1 cut(s) | 2083 |
| BseXI | GCAGC | 4 cut(s) | 915, 1193, 1365, 1432 |
| BseYI | CCCAGC | 1 cut(s) | 1602 |
| BsgI | GTGCAG | 1 cut(s) | 2077 |
| Bsh1285I | CGRYCG | 1 cut(s) | 524 |
| BshFI | GGCC | 5 cut(s) | 207, 447, 991, 1628, 1844 |
| BsiEI | CGRYCG | 1 cut(s) | 524 |
| BsiHKAI | GWGCWC | 3 cut(s) | 239, 825, 1518 |
| BsiSI | CCGG | 2 cut(s) | 496, 729 |
| BslFI | GGGAC | 2 cut(s) | 442, 1656 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 83, 703, 1531 |
| BsmAI | GTCTC | 4 cut(s) | 521, 1319, 2280, 2413 |
| BsmBI | CGTCTC | 1 cut(s) | 521 |
| BsmFI | GGGAC | 2 cut(s) | 442, 1656 |
| BsmI | GAATGC | 1 cut(s) | 1031 |
| BsnI | GGCC | 5 cut(s) | 207, 447, 991, 1628, 1844 |
| Bsp119I | TTCGAA | 2 cut(s) | 815, 1502 |
| Bsp1286I | GDGCHC | 5 cut(s) | 239, 825, 1518, 2083, 2520 |
| Bsp13I | TCCGGA | 1 cut(s) | 495 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 824 |
| BspACI | CCGC | 4 cut(s) | 220, 444, 1164, 1466 |
| BspANI | GGCC | 5 cut(s) | 207, 447, 991, 1628, 1844 |
| BspCNI | CTCAG | 7 cut(s) | 837, 874, 1334, 2211, 2259, 2461, 2547 |
| BspEI | TCCGGA | 1 cut(s) | 495 |
| BspLI | GGNNCC | 5 cut(s) | 695, 727, 1650, 1912, 2517 |
| BspMAI | CTGCAG | 1 cut(s) | 1211 |
| BspMI | ACCTGC | 2 cut(s) | 1620, 1927 |
| BspPI | GGATC | 4 cut(s) | 487, 720, 733, 1003 |
| BspT104I | TTCGAA | 2 cut(s) | 815, 1502 |
| BspTI | CTTAAG | 2 cut(s) | 1010, 2465 |
| BsrDI | GCAATG | 1 cut(s) | 2149 |
| BsrI | ACTGG | 7 cut(s) | 456, 718, 1652, 1733, 1790, 1950, 2439 |
| BssECI | CCNNGG | 3 cut(s) | 82, 1272, 1408 |
| BssT1I | CCWWGG | 2 cut(s) | 82, 1408 |
| Bst2UI | CCWGG | 7 cut(s) | 170, 200, 993, 1077, 1273, 1857, 2053 |
| Bst4CI | ACNGT | 7 cut(s) | 753, 969, 1387, 1586, 1935, 2213, 2424 |
| Bst6I | CTCTTC | 3 cut(s) | 123, 2021, 2229 |
| BstAFI | CTTAAG | 2 cut(s) | 1010, 2465 |
| BstAPI | GCANNNNNTGC | 3 cut(s) | 1612, 1795, 2299 |
| BstBI | TTCGAA | 2 cut(s) | 815, 1502 |
| BstC8I | GCNNGC | 3 cut(s) | 485, 1626, 1744 |
| BstEII | GGTNACC | 1 cut(s) | 2545 |
| BstH2I | RGCGCY | 1 cut(s) | 1207 |
| BstHHI | GCGC | 1 cut(s) | 1206 |
| BstMAI | GTCTC | 4 cut(s) | 521, 1319, 2280, 2413 |
| BstMCI | CGRYCG | 1 cut(s) | 524 |
| BstMWI | GCNNNNNNNGC | 7 cut(s) | 234, 1612, 1621, 1795, 2078, 2299, 2335 |
| BstNI | CCWGG | 7 cut(s) | 170, 200, 993, 1077, 1273, 1857, 2053 |
| BstNSI | RCATGY | 1 cut(s) | 1798 |
| BstPI | GGTNACC | 1 cut(s) | 2545 |
| BstSCI | CCNGG | 8 cut(s) | 168, 198, 728, 991, 1075, 1271, 1855, 2051 |
| BstSFI | CTRYAG | 5 cut(s) | 464, 1207, 1582, 2033, 2173 |
| BstSLI | GKGCMC | 1 cut(s) | 2083 |
| BstV1I | GCAGC | 4 cut(s) | 915, 1193, 1365, 1432 |
| BstV2I | GAAGAC | 5 cut(s) | 677, 710, 1874, 1973, 2385 |
| BstX2I | RGATCY | 3 cut(s) | 676, 725, 1960 |
| BstYI | RGATCY | 3 cut(s) | 676, 725, 1960 |
| Bsu36I | CCTNAGG | 1 cut(s) | 2363 |
| BsuI | GTATCC | 1 cut(s) | 1375 |
| BsuRI | GGCC | 5 cut(s) | 207, 447, 991, 1628, 1844 |
| BtrI | CACGTC | 1 cut(s) | 2335 |
| BtsIMutI | CAGTG | 3 cut(s) | 1591, 2083, 2429 |
| BveI | ACCTGC | 2 cut(s) | 1620, 1927 |
| Cac8I | GCNNGC | 3 cut(s) | 485, 1626, 1744 |
| CaiI | CAGNNNCTG | 1 cut(s) | 1328 |
| CfoI | GCGC | 1 cut(s) | 1206 |
| Cfr13I | GGNCC | 3 cut(s) | 205, 1405, 1648 |
| CseI | GACGC | 1 cut(s) | 217 |
| Csp6I | GTAC | 3 cut(s) | 780, 871, 1297 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 2100, 2135 |
| CviAII | CATG | 7 cut(s) | 64, 148, 440, 809, 1402, 1795, 2416 |
| CviQI | GTAC | 3 cut(s) | 780, 871, 1297 |
| DraIII | CACNNNGTG | 1 cut(s) | 1253 |
| EaeI | YGGCCR | 1 cut(s) | 1626 |
| Eam1104I | CTCTTC | 3 cut(s) | 123, 2021, 2229 |
| EarI | CTCTTC | 3 cut(s) | 123, 2021, 2229 |
| Ecl136II | GAGCTC | 2 cut(s) | 823, 1516 |
| Eco130I | CCWWGG | 2 cut(s) | 82, 1408 |
| Eco147I | AGGCCT | 1 cut(s) | 1844 |
| Eco24I | GRGCYC | 3 cut(s) | 825, 1518, 2520 |
| Eco32I | GATATC | 2 cut(s) | 1684, 2043 |
| Eco47I | GGWCC | 2 cut(s) | 1405, 1648 |
| Eco47III | AGCGCT | 1 cut(s) | 1205 |
| Eco53kI | GAGCTC | 2 cut(s) | 823, 1516 |
| Eco57I | CTGAAG | 3 cut(s) | 1733, 1985, 2397 |
| Eco81I | CCTNAGG | 1 cut(s) | 2363 |
| Eco91I | GGTNACC | 1 cut(s) | 2545 |
| EcoICRI | GAGCTC | 2 cut(s) | 823, 1516 |
| EcoO109I | RGGNCCY | 2 cut(s) | 205, 1648 |
| EcoO65I | GGTNACC | 1 cut(s) | 2545 |
| EcoRI | GAATTC | 1 cut(s) | 1001 |
| EcoRII | CCWGG | 7 cut(s) | 168, 198, 991, 1075, 1271, 1855, 2051 |
| EcoRV | GATATC | 2 cut(s) | 1684, 2043 |
| EcoT14I | CCWWGG | 2 cut(s) | 82, 1408 |
| EcoT22I | ATGCAT | 1 cut(s) | 2107 |
| EcoT38I | GRGCYC | 3 cut(s) | 825, 1518, 2520 |
| ErhI | CCWWGG | 2 cut(s) | 82, 1408 |
| Esp3I | CGTCTC | 1 cut(s) | 521 |
| FaeI | CATG | 7 cut(s) | 67, 151, 443, 812, 1405, 1798, 2419 |
| FalI | AAGNNNNNCTT | 6 cut(s) | 233, 265, 467, 499, 578, 610 |
| FaqI | GGGAC | 2 cut(s) | 442, 1656 |
| FatI | CATG | 7 cut(s) | 63, 147, 439, 808, 1401, 1794, 2415 |
| FblI | GTMKAC | 1 cut(s) | 2032 |
| Fnu4HI | GCNGC | 5 cut(s) | 445, 929, 1207, 1354, 1446 |
| FriOI | GRGCYC | 3 cut(s) | 825, 1518, 2520 |
| Fsp4HI | GCNGC | 5 cut(s) | 445, 929, 1207, 1354, 1446 |
| GlaI | GCGC | 1 cut(s) | 1205 |
| GluI | GCNGC | 5 cut(s) | 445, 929, 1207, 1354, 1446 |
| GsaI | CCCAGC | 1 cut(s) | 1606 |
| GsuI | CTGGAG | 1 cut(s) | 221 |
| HaeII | RGCGCY | 1 cut(s) | 1207 |
| HaeIII | GGCC | 5 cut(s) | 207, 447, 991, 1628, 1844 |
| HapII | CCGG | 2 cut(s) | 496, 729 |
| HgaI | GACGC | 1 cut(s) | 217 |
| HhaI | GCGC | 1 cut(s) | 1206 |
| Hin1II | CATG | 7 cut(s) | 67, 151, 443, 812, 1405, 1798, 2419 |
| Hin6I | GCGC | 1 cut(s) | 1204 |
| HinP1I | GCGC | 1 cut(s) | 1204 |
| HindIII | AAGCTT | 3 cut(s) | 624, 2070, 2441 |
| HinfI | GANTC | 6 cut(s) | 1268, 1319, 1860, 2029, 2306, 2461 |
| HpaII | CCGG | 2 cut(s) | 496, 729 |
| HphI | GGTGA | 5 cut(s) | 482, 1066, 1265, 2399, 2557 |
| Hpy166II | GTNNAC | 2 cut(s) | 1589, 2033 |
| Hpy188III | TCNNGA | 5 cut(s) | 496, 761, 1152, 1421, 1864 |
| Hpy8I | GTNNAC | 2 cut(s) | 1589, 2033 |
| Hpy99I | CGWCG | 1 cut(s) | 2088 |
| HpyCH4III | ACNGT | 7 cut(s) | 753, 969, 1387, 1586, 1935, 2213, 2424 |
| HpyCH4IV | ACGT | 4 cut(s) | 182, 345, 2334, 2369 |
| HpyF10VI | GCNNNNNNNGC | 7 cut(s) | 234, 1612, 1621, 1795, 2078, 2299, 2335 |
| HpySE526I | ACGT | 4 cut(s) | 182, 345, 2334, 2369 |
| Hsp92II | CATG | 7 cut(s) | 67, 151, 443, 812, 1405, 1798, 2419 |
| HspAI | GCGC | 1 cut(s) | 1204 |
| Kpn2I | TCCGGA | 1 cut(s) | 495 |
| LmnI | GCTCC | 3 cut(s) | 242, 1495, 2515 |
| Lsp1109I | GCAGC | 4 cut(s) | 915, 1193, 1365, 1432 |
| LweI | GCATC | 3 cut(s) | 1157, 1477, 2092 |
| MaeII | ACGT | 4 cut(s) | 182, 345, 2334, 2369 |
| MaeIII | GTNAC | 8 cut(s) | 183, 312, 885, 1054, 1597, 1897, 2497, 2545 |
| MfeI | CAATTG | 1 cut(s) | 1291 |
| MflI | RGATCY | 3 cut(s) | 676, 725, 1960 |
| MhlI | GDGCHC | 5 cut(s) | 239, 825, 1518, 2083, 2520 |
| MlsI | TGGCCA | 1 cut(s) | 1628 |
| MluNI | TGGCCA | 1 cut(s) | 1628 |
| MlyI | GAGTC | 3 cut(s) | 1313, 2038, 2300 |
| MmeI | TCCRAC | 3 cut(s) | 622, 1219, 2229 |
| Mox20I | TGGCCA | 1 cut(s) | 1628 |
| Mph1103I | ATGCAT | 1 cut(s) | 2107 |
| MroI | TCCGGA | 1 cut(s) | 495 |
| MroXI | GAANNNNTTC | 3 cut(s) | 542, 1005, 2442 |
| MscI | TGGCCA | 1 cut(s) | 1628 |
| MseI | TTAA | 5 cut(s) | 36, 606, 1011, 1928, 2466 |
| MslI | CAYNNNNRTG | 1 cut(s) | 2543 |
| Msp20I | TGGCCA | 1 cut(s) | 1628 |
| MspA1I | CMGCKG | 3 cut(s) | 31, 828, 1624 |
| MspCI | CTTAAG | 2 cut(s) | 1010, 2465 |
| MspI | CCGG | 2 cut(s) | 496, 729 |
| MspR9I | CCNGG | 8 cut(s) | 170, 200, 730, 993, 1077, 1273, 1857, 2053 |
| MunI | CAATTG | 1 cut(s) | 1291 |
| Mva1269I | GAATGC | 1 cut(s) | 1031 |
| MvaI | CCWGG | 7 cut(s) | 170, 200, 993, 1077, 1273, 1857, 2053 |
| MwoI | GCNNNNNNNGC | 7 cut(s) | 234, 1612, 1621, 1795, 2078, 2299, 2335 |
| NciI | CCSGG | 1 cut(s) | 730 |
| NlaIII | CATG | 7 cut(s) | 67, 151, 443, 812, 1405, 1798, 2419 |
| NlaIV | GGNNCC | 5 cut(s) | 695, 727, 1650, 1912, 2517 |
| NmuCI | GTSAC | 4 cut(s) | 1054, 1897, 2497, 2545 |
| NsiI | ATGCAT | 1 cut(s) | 2107 |
| NspI | RCATGY | 1 cut(s) | 1798 |
| NspV | TTCGAA | 2 cut(s) | 815, 1502 |
| PceI | AGGCCT | 1 cut(s) | 1844 |
| PctI | GAATGC | 1 cut(s) | 1031 |
| PdmI | GAANNNNTTC | 3 cut(s) | 542, 1005, 2442 |
| PfeI | GAWTC | 3 cut(s) | 1268, 1860, 2461 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 703, 1531 |
| PfoI | TCCNGGA | 3 cut(s) | 198, 728, 1075 |
| PkrI | GCNGC | 5 cut(s) | 446, 930, 1208, 1355, 1447 |
| Ple19I | CGATCG | 1 cut(s) | 524 |
| PleI | GAGTC | 3 cut(s) | 1313, 2037, 2300 |
| PpsI | GAGTC | 3 cut(s) | 1313, 2037, 2300 |
| PpuMI | RGGWCCY | 1 cut(s) | 1648 |
| PshBI | ATTAAT | 1 cut(s) | 606 |
| Psp124BI | GAGCTC | 2 cut(s) | 825, 1518 |
| Psp5II | RGGWCCY | 1 cut(s) | 1648 |
| Psp6I | CCWGG | 7 cut(s) | 168, 198, 991, 1075, 1271, 1855, 2051 |
| PspEI | GGTNACC | 1 cut(s) | 2545 |
| PspFI | CCCAGC | 1 cut(s) | 1602 |
| PspGI | CCWGG | 7 cut(s) | 168, 198, 991, 1075, 1271, 1855, 2051 |
| PspN4I | GGNNCC | 5 cut(s) | 695, 727, 1650, 1912, 2517 |
| PspPI | GGNCC | 3 cut(s) | 205, 1405, 1648 |
| PspPPI | RGGWCCY | 1 cut(s) | 1648 |
| PstI | CTGCAG | 1 cut(s) | 1211 |
| PstNI | CAGNNNCTG | 1 cut(s) | 1328 |
| PsuI | RGATCY | 3 cut(s) | 676, 725, 1960 |
| PvuI | CGATCG | 1 cut(s) | 524 |
| PvuII | CAGCTG | 3 cut(s) | 31, 828, 1624 |
| RsaI | GTAC | 3 cut(s) | 781, 872, 1298 |
| RsaNI | GTAC | 3 cut(s) | 780, 871, 1297 |
| RseI | CAYNNNNRTG | 1 cut(s) | 2543 |
| SacI | GAGCTC | 2 cut(s) | 825, 1518 |
| SaqAI | TTAA | 5 cut(s) | 36, 606, 1011, 1928, 2466 |
| SatI | GCNGC | 5 cut(s) | 445, 929, 1207, 1354, 1446 |
| Sau96I | GGNCC | 3 cut(s) | 205, 1405, 1648 |
| SchI | GAGTC | 3 cut(s) | 1313, 2038, 2300 |
| ScrFI | CCNGG | 8 cut(s) | 170, 200, 730, 993, 1077, 1273, 1857, 2053 |
| SduI | GDGCHC | 5 cut(s) | 239, 825, 1518, 2083, 2520 |
| SfaNI | GCATC | 3 cut(s) | 1157, 1477, 2092 |
| SfcI | CTRYAG | 5 cut(s) | 464, 1207, 1582, 2033, 2173 |
| SfuI | TTCGAA | 2 cut(s) | 815, 1502 |
| SinI | GGWCC | 2 cut(s) | 1405, 1648 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 2543 |
| SmlI | CTYRAG | 5 cut(s) | 281, 323, 1010, 2356, 2465 |
| SmoI | CTYRAG | 5 cut(s) | 281, 323, 1010, 2356, 2465 |
| SseBI | AGGCCT | 1 cut(s) | 1844 |
| SsiI | CCGC | 4 cut(s) | 220, 444, 1164, 1466 |
| SspI | AATATT | 1 cut(s) | 2131 |
| SstI | GAGCTC | 2 cut(s) | 825, 1518 |
| StuI | AGGCCT | 1 cut(s) | 1844 |
| StyD4I | CCNGG | 8 cut(s) | 168, 198, 728, 991, 1075, 1271, 1855, 2051 |
| StyI | CCWWGG | 2 cut(s) | 82, 1408 |
| TaaI | ACNGT | 7 cut(s) | 753, 969, 1387, 1586, 1935, 2213, 2424 |
| TaiI | ACGT | 4 cut(s) | 185, 348, 2337, 2372 |
| TaqI | TCGA | 8 cut(s) | 126, 246, 558, 815, 1037, 1258, 1502, 2412 |
| TatI | WGTACW | 1 cut(s) | 870 |
| TauI | GCSGC | 1 cut(s) | 447 |
| TfiI | GAWTC | 3 cut(s) | 1268, 1860, 2461 |
| Tru1I | TTAA | 5 cut(s) | 36, 606, 1011, 1928, 2466 |
| Tru9I | TTAA | 5 cut(s) | 36, 606, 1011, 1928, 2466 |
| TscAI | CASTG | 3 cut(s) | 1591, 2083, 2429 |
| TseFI | GTSAC | 4 cut(s) | 1054, 1897, 2497, 2545 |
| TseI | GCWGC | 4 cut(s) | 928, 1206, 1353, 1445 |
| Tsp45I | GTSAC | 4 cut(s) | 1054, 1897, 2497, 2545 |
| TspGWI | ACGGA | 3 cut(s) | 386, 545, 2445 |
| TspRI | CASTG | 3 cut(s) | 1591, 2083, 2429 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 703, 1531 |
| Vha464I | CTTAAG | 2 cut(s) | 1010, 2465 |
| VpaK11BI | GGWCC | 2 cut(s) | 1405, 1648 |
| VspI | ATTAAT | 1 cut(s) | 606 |
| XapI | RAATTY | 5 cut(s) | 1001, 1303, 1458, 1828, 2506 |
| XceI | RCATGY | 1 cut(s) | 1798 |
| XmaJI | CCTAGG | 1 cut(s) | 82 |
| XmiI | GTMKAC | 1 cut(s) | 2032 |
| XmnI | GAANNNNTTC | 3 cut(s) | 542, 1005, 2442 |
| Zsp2I | ATGCAT | 1 cut(s) | 2107 |