disease resistance
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Rx_N | PF18052 | 10 - 99 | 6.7e-21 | Rx N-terminal domain |
| NB-ARC | PF00931 | 189 - 341 | 1.8e-35 | NB-ARC domain |
| WHD_DRP | PF23559 | 426 - 494 | 6e-24 | Disease resistance protein Winged helix domain |
| LRR_14 | PF23598 | 565 - 856 | 1.3e-17 | Leucine-rich repeat region |
| LRR_R13L1-DRL21 | PF25019 | 692 - 812 | 2.1e-31 | R13L1/DRL21 LRRs |
| LRR_RPS2 | PF23247 | 1053 - 1188 | 2.2e-06 | Plant disease resistance protein RPS2-like, leucine-rich repeats |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 2 cut(s) | 28, 1647 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 3214 |
| AatII | GACGTC | 1 cut(s) | 3212 |
| Acc36I | ACCTGC | 2 cut(s) | 28, 1647 |
| Acc65I | GGTACC | 1 cut(s) | 3798 |
| AccB1I | GGYRCC | 2 cut(s) | 1616, 3798 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 2393 |
| AccI | GTMKAC | 2 cut(s) | 1363, 3046 |
| AccII | CGCG | 4 cut(s) | 66, 1048, 2054, 2670 |
| AclWI | GGATC | 6 cut(s) | 611, 1309, 3704, 3704, 4015, 4028 |
| AcoI | YGGCCR | 1 cut(s) | 2945 |
| AcsI | RAATTY | 8 cut(s) | 338, 1295, 1610, 1777, 1930, 2378, 3088, 3621 |
| AcuI | CTGAAG | 7 cut(s) | 131, 1814, 2151, 2460, 2543, 3239, 3374 |
| AcyI | GRCGYC | 2 cut(s) | 59, 3209 |
| AdeI | CACNNNGTG | 1 cut(s) | 2724 |
| AfiI | CCNNNNNNNGG | 8 cut(s) | 503, 882, 883, 1327, 2393, 2617, 3887, 3962 |
| AflII | CTTAAG | 3 cut(s) | 665, 2990, 3245 |
| AflIII | ACRYGT | 4 cut(s) | 628, 842, 920, 3294 |
| AhdI | GACNNNNNGTC | 2 cut(s) | 278, 921 |
| AjiI | CACGTC | 1 cut(s) | 923 |
| AjnI | CCWGG | 2 cut(s) | 219, 1409 |
| AjuI | GAANNNNNNNTTGG | 3 cut(s) | 38, 2941, 2973 |
| Alw21I | GWGCWC | 4 cut(s) | 747, 842, 895, 3750 |
| Alw26I | GTCTC | 2 cut(s) | 2495, 4005 |
| AlwI | GGATC | 6 cut(s) | 611, 1309, 3704, 3704, 4015, 4028 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 43 |
| Ama87I | CYCGRG | 2 cut(s) | 300, 3539 |
| AoxI | GGCC | 5 cut(s) | 2075, 2945, 3367, 3504, 3889 |
| ApaI | GGGCCC | 1 cut(s) | 2079 |
| ApeKI | GCWGC | 5 cut(s) | 43, 286, 1106, 1490, 3232 |
| ApoI | RAATTY | 8 cut(s) | 338, 1295, 1610, 1777, 1930, 2378, 3088, 3621 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 857, 889 |
| AseI | ATTAAT | 1 cut(s) | 1938 |
| Asp700I | GAANNNNTTC | 6 cut(s) | 18, 761, 2326, 2556, 3324, 3876 |
| Asp718I | GGTACC | 1 cut(s) | 3798 |
| AspLEI | GCGC | 4 cut(s) | 1050, 2054, 3244, 3978 |
| AspS9I | GGNCC | 5 cut(s) | 409, 494, 2075, 2076, 3889 |
| AsuHPI | GGTGA | 5 cut(s) | 2269, 2855, 2882, 2900, 3716 |
| AvaI | CYCGRG | 2 cut(s) | 300, 3539 |
| AvaII | GGWCC | 2 cut(s) | 409, 494 |
| BaeGI | GKGCMC | 1 cut(s) | 2079 |
| BalI | TGGCCA | 1 cut(s) | 2947 |
| BamHI | GGATCC | 1 cut(s) | 4020 |
| BanI | GGYRCC | 2 cut(s) | 1616, 3798 |
| BanII | GRGCYC | 2 cut(s) | 1606, 2079 |
| BbsI | GAAGAC | 5 cut(s) | 243, 522, 1732, 3715, 3786 |
| Bbv12I | GWGCWC | 4 cut(s) | 747, 842, 895, 3750 |
| BbvI | GCAGC | 5 cut(s) | 30, 298, 1093, 1477, 3219 |
| BceAI | ACGGC | 1 cut(s) | 2021 |
| BciT130I | CCWGG | 2 cut(s) | 221, 1411 |
| BciVI | GTATCC | 3 cut(s) | 80, 2827, 3929 |
| BcoDI | GTCTC | 2 cut(s) | 2495, 4005 |
| BfmI | CTRYAG | 4 cut(s) | 35, 1491, 2015, 2704 |
| BfoI | RGCGCY | 2 cut(s) | 3245, 3979 |
| BfrI | CTTAAG | 3 cut(s) | 665, 2990, 3245 |
| BfuAI | ACCTGC | 2 cut(s) | 28, 1647 |
| BfuI | GTATCC | 3 cut(s) | 80, 2827, 3929 |
| BglII | AGATCT | 2 cut(s) | 1375, 3715 |
| BisI | GCNGC | 6 cut(s) | 44, 287, 1107, 1491, 2981, 3233 |
| BlsI | GCNGC | 6 cut(s) | 45, 288, 1108, 1492, 2982, 3234 |
| BmcAI | AGTACT | 1 cut(s) | 1215 |
| Bme1390I | CCNGG | 2 cut(s) | 221, 1411 |
| Bme18I | GGWCC | 2 cut(s) | 409, 494 |
| BmeRI | GACNNNNNGTC | 2 cut(s) | 278, 921 |
| BmeT110I | CYCGRG | 2 cut(s) | 300, 3539 |
| BmgBI | CACGTC | 1 cut(s) | 923 |
| BmgT120I | GGNCC | 5 cut(s) | 409, 494, 2075, 2076, 3889 |
| BmiI | GGNNCC | 8 cut(s) | 320, 952, 1618, 2077, 2078, 2458, 3800, 4022 |
| BmrFI | CCNGG | 2 cut(s) | 221, 1411 |
| BmrI | ACTGGG | 3 cut(s) | 468, 905, 1205 |
| BmuI | ACTGGG | 3 cut(s) | 468, 905, 1205 |
| BpiI | GAAGAC | 5 cut(s) | 243, 522, 1732, 3715, 3786 |
| BpmI | CTGGAG | 4 cut(s) | 30, 1608, 3299, 3521 |
| BpuEI | CTTGAG | 4 cut(s) | 2095, 2252, 3202, 3617 |
| Bsa29I | ATCGAT | 1 cut(s) | 731 |
| BsaBI | GATNNNNATC | 2 cut(s) | 3479, 3714 |
| BsaHI | GRCGYC | 2 cut(s) | 59, 3209 |
| BsaI | GGTCTC | 1 cut(s) | 2495 |
| BsaJI | CCNNGG | 4 cut(s) | 64, 648, 2037, 3237 |
| BsaWI | WCCGGW | 2 cut(s) | 2491, 3795 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 239, 269, 829, 859 |
| Bsc4I | CCNNNNNNNGG | 8 cut(s) | 503, 882, 883, 1327, 2393, 2617, 3887, 3962 |
| Bse1I | ACTGG | 8 cut(s) | 390, 436, 474, 900, 1211, 2800, 3282, 3504 |
| Bse3DI | GCAATG | 1 cut(s) | 1096 |
| Bse8I | GATNNNNATC | 2 cut(s) | 3479, 3714 |
| BseBI | CCWGG | 2 cut(s) | 221, 1411 |
| BseCI | ATCGAT | 1 cut(s) | 731 |
| BseDI | CCNNGG | 4 cut(s) | 64, 648, 2037, 3237 |
| BseGI | GGATG | 6 cut(s) | 211, 517, 694, 737, 1332, 1989 |
| BseJI | GATNNNNATC | 2 cut(s) | 3479, 3714 |
| BseLI | CCNNNNNNNGG | 8 cut(s) | 503, 882, 883, 1327, 2393, 2617, 3887, 3962 |
| BseMI | GCAATG | 1 cut(s) | 1096 |
| BseMII | CTCAG | 5 cut(s) | 776, 1561, 1758, 2625, 3697 |
| BseNI | ACTGG | 8 cut(s) | 390, 436, 474, 900, 1211, 2800, 3282, 3504 |
| BseSI | GKGCMC | 1 cut(s) | 2079 |
| BseXI | GCAGC | 5 cut(s) | 30, 298, 1093, 1477, 3219 |
| BsgI | GTGCAG | 1 cut(s) | 2823 |
| Bsh1236I | CGCG | 4 cut(s) | 66, 1048, 2054, 2670 |
| Bsh1285I | CGRYCG | 1 cut(s) | 85 |
| BshFI | GGCC | 5 cut(s) | 2077, 2947, 3369, 3506, 3891 |
| BshNI | GGYRCC | 2 cut(s) | 1616, 3798 |
| BshVI | ATCGAT | 1 cut(s) | 731 |
| BsiEI | CGRYCG | 1 cut(s) | 85 |
| BsiHKAI | GWGCWC | 4 cut(s) | 747, 842, 895, 3750 |
| BsiHKCI | CYCGRG | 2 cut(s) | 300, 3539 |
| BsiSI | CCGG | 2 cut(s) | 2492, 3796 |
| BslFI | GGGAC | 4 cut(s) | 859, 2110, 3846, 3977 |
| BslI | CCNNNNNNNGG | 8 cut(s) | 503, 882, 883, 1327, 2393, 2617, 3887, 3962 |
| BsmAI | GTCTC | 2 cut(s) | 2495, 4005 |
| BsmFI | GGGAC | 4 cut(s) | 859, 2110, 3846, 3977 |
| BsmI | GAATGC | 4 cut(s) | 1015, 1203, 1348, 2678 |
| BsnI | GGCC | 5 cut(s) | 2077, 2947, 3369, 3506, 3891 |
| Bso31I | GGTCTC | 1 cut(s) | 2495 |
| BsoBI | CYCGRG | 2 cut(s) | 300, 3539 |
| Bsp120I | GGGCCC | 1 cut(s) | 2075 |
| Bsp1286I | GDGCHC | 6 cut(s) | 747, 842, 895, 1606, 2079, 3750 |
| Bsp19I | CCATGG | 1 cut(s) | 648 |
| Bsp68I | TCGCGA | 1 cut(s) | 2670 |
| BspANI | GGCC | 5 cut(s) | 2077, 2947, 3369, 3506, 3891 |
| BspCNI | CTCAG | 5 cut(s) | 777, 1560, 1759, 2626, 3696 |
| BspDI | ATCGAT | 1 cut(s) | 731 |
| BspFNI | CGCG | 4 cut(s) | 66, 1048, 2054, 2670 |
| BspHI | TCATGA | 1 cut(s) | 925 |
| BspLI | GGNNCC | 8 cut(s) | 320, 952, 1618, 2077, 2078, 2458, 3800, 4022 |
| BspMAI | CTGCAG | 3 cut(s) | 39, 1495, 2019 |
| BspMI | ACCTGC | 2 cut(s) | 28, 1647 |
| BspPI | GGATC | 6 cut(s) | 611, 1309, 3704, 3704, 4015, 4028 |
| BspT107I | GGYRCC | 2 cut(s) | 1616, 3798 |
| BspTI | CTTAAG | 3 cut(s) | 665, 2990, 3245 |
| BspTNI | GGTCTC | 1 cut(s) | 2495 |
| BsrDI | GCAATG | 1 cut(s) | 1096 |
| BsrI | ACTGG | 8 cut(s) | 390, 436, 474, 900, 1211, 2800, 3282, 3504 |
| BssECI | CCNNGG | 4 cut(s) | 64, 648, 2037, 3237 |
| BssNI | GRCGYC | 2 cut(s) | 59, 3209 |
| BssT1I | CCWWGG | 2 cut(s) | 648, 3237 |
| Bst2UI | CCWGG | 2 cut(s) | 221, 1411 |
| Bst6I | CTCTTC | 3 cut(s) | 159, 2865, 3656 |
| BstACI | GRCGYC | 2 cut(s) | 59, 3209 |
| BstAFI | CTTAAG | 3 cut(s) | 665, 2990, 3245 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 43, 2724 |
| BstC8I | GCNNGC | 7 cut(s) | 307, 998, 1538, 2608, 3521, 3644, 3893 |
| BstDEI | CTNAG | 7 cut(s) | 453, 785, 1547, 1767, 2634, 3683, 3914 |
| BstDSI | CCRYGG | 3 cut(s) | 64, 648, 2037 |
| BstEII | GGTNACC | 1 cut(s) | 1839 |
| BstF5I | GGATG | 6 cut(s) | 211, 517, 694, 737, 1332, 1989 |
| BstFNI | CGCG | 4 cut(s) | 66, 1048, 2054, 2670 |
| BstH2I | RGCGCY | 2 cut(s) | 3245, 3979 |
| BstHHI | GCGC | 4 cut(s) | 1050, 2054, 3244, 3978 |
| BstMAI | GTCTC | 2 cut(s) | 2495, 4005 |
| BstMCI | CGRYCG | 1 cut(s) | 85 |
| BstNI | CCWGG | 2 cut(s) | 221, 1411 |
| BstNSI | RCATGY | 6 cut(s) | 632, 846, 1540, 2248, 2610, 3523 |
| BstPI | GGTNACC | 1 cut(s) | 1839 |
| BstSCI | CCNGG | 2 cut(s) | 219, 1409 |
| BstSFI | CTRYAG | 4 cut(s) | 35, 1491, 2015, 2704 |
| BstSLI | GKGCMC | 1 cut(s) | 2079 |
| BstUI | CGCG | 4 cut(s) | 66, 1048, 2054, 2670 |
| BstV1I | GCAGC | 5 cut(s) | 30, 298, 1093, 1477, 3219 |
| BstV2I | GAAGAC | 5 cut(s) | 243, 522, 1732, 3715, 3786 |
| BstX2I | RGATCY | 4 cut(s) | 1375, 3709, 3715, 4020 |
| BstYI | RGATCY | 4 cut(s) | 1375, 3709, 3715, 4020 |
| Bsu15I | ATCGAT | 1 cut(s) | 731 |
| BsuI | GTATCC | 3 cut(s) | 80, 2827, 3929 |
| BsuRI | GGCC | 5 cut(s) | 2077, 2947, 3369, 3506, 3891 |
| BsuTUI | ATCGAT | 1 cut(s) | 731 |
| BtgI | CCRYGG | 3 cut(s) | 64, 648, 2037 |
| BtrI | CACGTC | 1 cut(s) | 923 |
| BtsCI | GGATG | 6 cut(s) | 211, 517, 694, 737, 1332, 1989 |
| BtsIMutI | CAGTG | 4 cut(s) | 745, 893, 1826, 3902 |
| BtuMI | TCGCGA | 1 cut(s) | 2670 |
| BveI | ACCTGC | 2 cut(s) | 28, 1647 |
| Cac8I | GCNNGC | 7 cut(s) | 307, 998, 1538, 2608, 3521, 3644, 3893 |
| CaiI | CAGNNNCTG | 1 cut(s) | 43 |
| CciI | TCATGA | 1 cut(s) | 925 |
| CfoI | GCGC | 4 cut(s) | 1050, 2054, 3244, 3978 |
| Cfr13I | GGNCC | 5 cut(s) | 409, 494, 2075, 2076, 3889 |
| Cfr42I | CCGCGG | 1 cut(s) | 67 |
| ClaI | ATCGAT | 1 cut(s) | 731 |
| CseI | GACGC | 5 cut(s) | 67, 282, 1934, 2043, 2716 |
| DdeI | CTNAG | 7 cut(s) | 453, 785, 1547, 1767, 2634, 3683, 3914 |
| DraIII | CACNNNGTG | 1 cut(s) | 2724 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 3214 |
| DriI | GACNNNNNGTC | 2 cut(s) | 278, 921 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 3214 |
| EaeI | YGGCCR | 1 cut(s) | 2945 |
| Eam1104I | CTCTTC | 3 cut(s) | 159, 2865, 3656 |
| Eam1105I | GACNNNNNGTC | 2 cut(s) | 278, 921 |
| EarI | CTCTTC | 3 cut(s) | 159, 2865, 3656 |
| Eco130I | CCWWGG | 2 cut(s) | 648, 3237 |
| Eco147I | AGGCCT | 2 cut(s) | 3369, 3506 |
| Eco24I | GRGCYC | 2 cut(s) | 1606, 2079 |
| Eco31I | GGTCTC | 1 cut(s) | 2495 |
| Eco32I | GATATC | 2 cut(s) | 396, 3041 |
| Eco47I | GGWCC | 2 cut(s) | 409, 494 |
| Eco57I | CTGAAG | 7 cut(s) | 131, 1814, 2151, 2460, 2543, 3239, 3374 |
| Eco88I | CYCGRG | 2 cut(s) | 300, 3539 |
| Eco91I | GGTNACC | 1 cut(s) | 1839 |
| EcoO109I | RGGNCCY | 2 cut(s) | 2075, 2076 |
| EcoO65I | GGTNACC | 1 cut(s) | 1839 |
| EcoRII | CCWGG | 2 cut(s) | 219, 1409 |
| EcoRV | GATATC | 2 cut(s) | 396, 3041 |
| EcoT14I | CCWWGG | 2 cut(s) | 648, 3237 |
| EcoT22I | ATGCAT | 2 cut(s) | 1461, 2608 |
| EcoT38I | GRGCYC | 2 cut(s) | 1606, 2079 |
| ErhI | CCWWGG | 2 cut(s) | 648, 3237 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 3541, 3573 |
| FaqI | GGGAC | 4 cut(s) | 859, 2110, 3846, 3977 |
| FauI | CCCGC | 3 cut(s) | 71, 592, 3429 |
| FauNDI | CATATG | 3 cut(s) | 3188, 3883, 4001 |
| FblI | GTMKAC | 2 cut(s) | 1363, 3046 |
| Fnu4HI | GCNGC | 6 cut(s) | 44, 287, 1107, 1491, 2981, 3233 |
| FokI | GGATG | 6 cut(s) | 218, 524, 701, 724, 1339, 1996 |
| FriOI | GRGCYC | 2 cut(s) | 1606, 2079 |
| Fsp4HI | GCNGC | 6 cut(s) | 44, 287, 1107, 1491, 2981, 3233 |
| GlaI | GCGC | 4 cut(s) | 1049, 2053, 3243, 3977 |
| GluI | GCNGC | 6 cut(s) | 44, 287, 1107, 1491, 2981, 3233 |
| GsuI | CTGGAG | 4 cut(s) | 30, 1608, 3299, 3521 |
| HaeII | RGCGCY | 2 cut(s) | 3245, 3979 |
| HaeIII | GGCC | 5 cut(s) | 2077, 2947, 3369, 3506, 3891 |
| HapII | CCGG | 2 cut(s) | 2492, 3796 |
| HgaI | GACGC | 5 cut(s) | 67, 282, 1934, 2043, 2716 |
| HhaI | GCGC | 4 cut(s) | 1050, 2054, 3244, 3978 |
| Hin1I | GRCGYC | 2 cut(s) | 59, 3209 |
| Hin6I | GCGC | 4 cut(s) | 1048, 2052, 3242, 3976 |
| HinP1I | GCGC | 4 cut(s) | 1048, 2052, 3242, 3976 |
| HincII | GTYRAC | 4 cut(s) | 57, 485, 2007, 2974 |
| HindII | GTYRAC | 4 cut(s) | 57, 485, 2007, 2974 |
| HpaII | CCGG | 2 cut(s) | 2492, 3796 |
| HphI | GGTGA | 5 cut(s) | 2269, 2855, 2882, 2900, 3716 |
| Hpy99I | CGWCG | 2 cut(s) | 276, 2821 |
| HpyCH4IV | ACGT | 7 cut(s) | 266, 922, 1524, 1900, 2720, 3209, 3296 |
| HpyF3I | CTNAG | 7 cut(s) | 453, 785, 1547, 1767, 2634, 3683, 3914 |
| HpySE526I | ACGT | 7 cut(s) | 266, 922, 1524, 1900, 2720, 3209, 3296 |
| Hsp92I | GRCGYC | 2 cut(s) | 59, 3209 |
| HspAI | GCGC | 4 cut(s) | 1048, 2052, 3242, 3976 |
| KpnI | GGTACC | 1 cut(s) | 3802 |
| KspI | CCGCGG | 1 cut(s) | 67 |
| LmnI | GCTCC | 9 cut(s) | 143, 318, 837, 890, 950, 1399, 3753, 3983, 4033 |
| Lsp1109I | GCAGC | 5 cut(s) | 30, 298, 1093, 1477, 3219 |
| MaeII | ACGT | 7 cut(s) | 266, 922, 1524, 1900, 2720, 3209, 3296 |
| MfeI | CAATTG | 4 cut(s) | 138, 2399, 2874, 2900 |
| MflI | RGATCY | 4 cut(s) | 1375, 3709, 3715, 4020 |
| MhlI | GDGCHC | 6 cut(s) | 747, 842, 895, 1606, 2079, 3750 |
| MlsI | TGGCCA | 1 cut(s) | 2947 |
| MluNI | TGGCCA | 1 cut(s) | 2947 |
| MlyI | GAGTC | 1 cut(s) | 1192 |
| MmeI | TCCRAC | 2 cut(s) | 666, 868 |
| Mox20I | TGGCCA | 1 cut(s) | 2947 |
| Mph1103I | ATGCAT | 2 cut(s) | 1461, 2608 |
| MroXI | GAANNNNTTC | 6 cut(s) | 18, 761, 2326, 2556, 3324, 3876 |
| MscI | TGGCCA | 1 cut(s) | 2947 |
| MslI | CAYNNNNRTG | 2 cut(s) | 362, 1922 |
| Msp20I | TGGCCA | 1 cut(s) | 2947 |
| MspA1I | CMGCKG | 4 cut(s) | 66, 3232, 3436, 3702 |
| MspCI | CTTAAG | 3 cut(s) | 665, 2990, 3245 |
| MspI | CCGG | 2 cut(s) | 2492, 3796 |
| MspR9I | CCNGG | 2 cut(s) | 221, 1411 |
| MunI | CAATTG | 4 cut(s) | 138, 2399, 2874, 2900 |
| Mva1269I | GAATGC | 4 cut(s) | 1015, 1203, 1348, 2678 |
| MvaI | CCWGG | 2 cut(s) | 221, 1411 |
| MvnI | CGCG | 4 cut(s) | 66, 1048, 2054, 2670 |
| NcoI | CCATGG | 1 cut(s) | 648 |
| NdeI | CATATG | 3 cut(s) | 3188, 3883, 4001 |
| NlaIV | GGNNCC | 8 cut(s) | 320, 952, 1618, 2077, 2078, 2458, 3800, 4022 |
| NmeAIII | GCCGAG | 1 cut(s) | 1607 |
| NmuCI | GTSAC | 5 cut(s) | 709, 845, 913, 1687, 2125 |
| NruI | TCGCGA | 1 cut(s) | 2670 |
| NsiI | ATGCAT | 2 cut(s) | 1461, 2608 |
| NspI | RCATGY | 6 cut(s) | 632, 846, 1540, 2248, 2610, 3523 |
| PaeI | GCATGC | 3 cut(s) | 1540, 2610, 3523 |
| PaeR7I | CTCGAG | 2 cut(s) | 300, 3539 |
| PagI | TCATGA | 1 cut(s) | 925 |
| PaqCI | CACCTGC | 2 cut(s) | 28, 1647 |
| PceI | AGGCCT | 2 cut(s) | 3369, 3506 |
| PciI | ACATGT | 2 cut(s) | 628, 842 |
| PctI | GAATGC | 4 cut(s) | 1015, 1203, 1348, 2678 |
| PdmI | GAANNNNTTC | 6 cut(s) | 18, 761, 2326, 2556, 3324, 3876 |
| PflFI | GACNNNGTC | 1 cut(s) | 2815 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 2393 |
| PkrI | GCNGC | 6 cut(s) | 45, 288, 1108, 1492, 2982, 3234 |
| PleI | GAGTC | 1 cut(s) | 1191 |
| PpsI | GAGTC | 1 cut(s) | 1191 |
| PscI | ACATGT | 2 cut(s) | 628, 842 |
| PshBI | ATTAAT | 1 cut(s) | 1938 |
| Psp6I | CCWGG | 2 cut(s) | 219, 1409 |
| PspEI | GGTNACC | 1 cut(s) | 1839 |
| PspGI | CCWGG | 2 cut(s) | 219, 1409 |
| PspN4I | GGNNCC | 8 cut(s) | 320, 952, 1618, 2077, 2078, 2458, 3800, 4022 |
| PspOMI | GGGCCC | 1 cut(s) | 2075 |
| PspPI | GGNCC | 5 cut(s) | 409, 494, 2075, 2076, 3889 |
| PspXI | VCTCGAGB | 1 cut(s) | 300 |
| PstI | CTGCAG | 3 cut(s) | 39, 1495, 2019 |
| PstNI | CAGNNNCTG | 1 cut(s) | 43 |
| PsuI | RGATCY | 4 cut(s) | 1375, 3709, 3715, 4020 |
| PsyI | GACNNNGTC | 1 cut(s) | 2815 |
| PvuII | CAGCTG | 1 cut(s) | 3232 |
| RruI | TCGCGA | 1 cut(s) | 2670 |
| RseI | CAYNNNNRTG | 2 cut(s) | 362, 1922 |
| SacII | CCGCGG | 1 cut(s) | 67 |
| SatI | GCNGC | 6 cut(s) | 44, 287, 1107, 1491, 2981, 3233 |
| Sau96I | GGNCC | 5 cut(s) | 409, 494, 2075, 2076, 3889 |
| ScaI | AGTACT | 1 cut(s) | 1215 |
| SchI | GAGTC | 1 cut(s) | 1192 |
| ScrFI | CCNGG | 2 cut(s) | 221, 1411 |
| SduI | GDGCHC | 6 cut(s) | 747, 842, 895, 1606, 2079, 3750 |
| SfcI | CTRYAG | 4 cut(s) | 35, 1491, 2015, 2704 |
| Sfr274I | CTCGAG | 2 cut(s) | 300, 3539 |
| Sfr303I | CCGCGG | 1 cut(s) | 67 |
| SgrBI | CCGCGG | 1 cut(s) | 67 |
| SinI | GGWCC | 2 cut(s) | 409, 494 |
| SlaI | CTCGAG | 2 cut(s) | 300, 3539 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 362, 1922 |
| SmlI | CTYRAG | 9 cut(s) | 300, 665, 2110, 2267, 2990, 3181, 3245, 3539, 3632 |
| SmoI | CTYRAG | 9 cut(s) | 300, 665, 2110, 2267, 2990, 3181, 3245, 3539, 3632 |
| SphI | GCATGC | 3 cut(s) | 1540, 2610, 3523 |
| SseBI | AGGCCT | 2 cut(s) | 3369, 3506 |
| SspI | AATATT | 2 cut(s) | 1164, 2341 |
| StuI | AGGCCT | 2 cut(s) | 3369, 3506 |
| StyD4I | CCNGG | 2 cut(s) | 219, 1409 |
| StyI | CCWWGG | 2 cut(s) | 648, 3237 |
| TaiI | ACGT | 7 cut(s) | 269, 925, 1527, 1903, 2723, 3212, 3299 |
| TaqII | GACCGA | 1 cut(s) | 71 |
| TatI | WGTACW | 2 cut(s) | 1213, 1553 |
| TauI | GCSGC | 1 cut(s) | 2983 |
| TscAI | CASTG | 4 cut(s) | 752, 900, 1833, 3909 |
| TseFI | GTSAC | 5 cut(s) | 709, 845, 913, 1687, 2125 |
| TseI | GCWGC | 5 cut(s) | 43, 286, 1106, 1490, 3232 |
| Tsp45I | GTSAC | 5 cut(s) | 709, 845, 913, 1687, 2125 |
| TspGWI | ACGGA | 6 cut(s) | 106, 331, 392, 418, 3752, 3911 |
| TspRI | CASTG | 4 cut(s) | 752, 900, 1833, 3909 |
| Tth111I | GACNNNGTC | 1 cut(s) | 2815 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 2393 |
| Vha464I | CTTAAG | 3 cut(s) | 665, 2990, 3245 |
| VpaK11BI | GGWCC | 2 cut(s) | 409, 494 |
| VspI | ATTAAT | 1 cut(s) | 1938 |
| XapI | RAATTY | 8 cut(s) | 338, 1295, 1610, 1777, 1930, 2378, 3088, 3621 |
| XbaI | TCTAGA | 1 cut(s) | 3221 |
| XceI | RCATGY | 6 cut(s) | 632, 846, 1540, 2248, 2610, 3523 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 592, 2035 |
| XhoI | CTCGAG | 2 cut(s) | 300, 3539 |
| XmiI | GTMKAC | 2 cut(s) | 1363, 3046 |
| XmnI | GAANNNNTTC | 6 cut(s) | 18, 761, 2326, 2556, 3324, 3876 |
| ZraI | GACGTC | 1 cut(s) | 3210 |
| ZrmI | AGTACT | 1 cut(s) | 1215 |
| Zsp2I | ATGCAT | 2 cut(s) | 1461, 2608 |