disease resistance
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Rx_N | PF18052 | 11 - 100 | 5.4e-21 | Rx N-terminal domain |
| NB-ARC | PF00931 | 182 - 352 | 1.5e-36 | NB-ARC domain |
| WHD_DRP | PF23559 | 433 - 501 | 4.1e-22 | Disease resistance protein Winged helix domain |
| LRR_14 | PF23598 | 574 - 839 | 2e-23 | Leucine-rich repeat region |
| LRR_R13L1-DRL21 | PF25019 | 690 - 809 | 1.9e-31 | R13L1/DRL21 LRRs |
| Brix | PF04427 | 1464 - 1556 | 1.3e-13 | Brix domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 2700 |
| AatII | GACGTC | 1 cut(s) | 4242 |
| Acc36I | ACCTGC | 1 cut(s) | 3426 |
| Acc65I | GGTACC | 2 cut(s) | 1812, 3121 |
| AccB1I | GGYRCC | 4 cut(s) | 1812, 3121, 3900, 4429 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 986 |
| AccBSI | CCGCTC | 2 cut(s) | 2205, 4486 |
| AccI | GTMKAC | 2 cut(s) | 2659, 3825 |
| AccII | CGCG | 3 cut(s) | 279, 3450, 4645 |
| AccIII | TCCGGA | 1 cut(s) | 3040 |
| AclWI | GGATC | 5 cut(s) | 566, 3033, 3243, 3945, 4695 |
| AcoI | YGGCCR | 3 cut(s) | 2389, 2430, 2718 |
| AcsI | RAATTY | 6 cut(s) | 1069, 1316, 1963, 2297, 3163, 4750 |
| AcuI | CTGAAG | 5 cut(s) | 1653, 3563, 3860, 4057, 4649 |
| AcvI | CACGTG | 1 cut(s) | 947 |
| AcyI | GRCGYC | 2 cut(s) | 4199, 4239 |
| AfaI | GTAC | 7 cut(s) | 318, 1236, 1736, 1814, 3123, 3218, 4727 |
| AfiI | CCNNNNNNNGG | 9 cut(s) | 518, 730, 986, 1553, 2387, 2611, 3047, 3482, 4016 |
| AflII | CTTAAG | 2 cut(s) | 908, 1082 |
| AflIII | ACRYGT | 2 cut(s) | 866, 944 |
| AjnI | CCWGG | 3 cut(s) | 487, 4009, 4603 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 1323, 1355 |
| AleI | CACNNNNGTG | 1 cut(s) | 2751 |
| Alw21I | GWGCWC | 4 cut(s) | 866, 1749, 2235, 2748 |
| Alw26I | GTCTC | 7 cut(s) | 1512, 1616, 1795, 2940, 2967, 3467, 4062 |
| Alw44I | GTGCAC | 1 cut(s) | 2744 |
| AlwI | GGATC | 5 cut(s) | 566, 3033, 3243, 3945, 4695 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 43, 986 |
| Ama87I | CYCGRG | 3 cut(s) | 63, 1450, 3475 |
| Aor13HI | TCCGGA | 1 cut(s) | 3040 |
| AoxI | GGCC | 8 cut(s) | 482, 1500, 2154, 2389, 2430, 2718, 3268, 4028 |
| ApaI | GGGCCC | 1 cut(s) | 2158 |
| ApaLI | GTGCAC | 1 cut(s) | 2744 |
| ApoI | RAATTY | 6 cut(s) | 1069, 1316, 1963, 2297, 3163, 4750 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 1301, 1333 |
| AseI | ATTAAT | 2 cut(s) | 1334, 1835 |
| Asp700I | GAANNNNTTC | 5 cut(s) | 876, 2796, 3104, 3540, 4661 |
| Asp718I | GGTACC | 2 cut(s) | 1812, 3121 |
| AspLEI | GCGC | 4 cut(s) | 2788, 3846, 4213, 4219 |
| AsuII | TTCGAA | 3 cut(s) | 2295, 2851, 4556 |
| AvaI | CYCGRG | 3 cut(s) | 63, 1450, 3475 |
| AvaII | GGWCC | 6 cut(s) | 338, 509, 2100, 4610, 4640, 4714 |
| AxyI | CCTNAGG | 1 cut(s) | 4140 |
| BaeGI | GKGCMC | 3 cut(s) | 2158, 2748, 3905 |
| BalI | TGGCCA | 3 cut(s) | 2391, 2432, 2720 |
| BanI | GGYRCC | 4 cut(s) | 1812, 3121, 3900, 4429 |
| BanII | GRGCYC | 2 cut(s) | 979, 2158 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 313, 345 |
| BbrPI | CACGTG | 1 cut(s) | 947 |
| BbsI | GAAGAC | 3 cut(s) | 537, 646, 1919 |
| Bbv12I | GWGCWC | 4 cut(s) | 866, 1749, 2235, 2748 |
| BbvCI | CCTCAGC | 2 cut(s) | 3569, 4194 |
| BceAI | ACGGC | 1 cut(s) | 4143 |
| BciT130I | CCWGG | 3 cut(s) | 489, 4011, 4605 |
| BciVI | GTATCC | 1 cut(s) | 3590 |
| BclI | TGATCA | 1 cut(s) | 3526 |
| BcoDI | GTCTC | 7 cut(s) | 1512, 1616, 1795, 2940, 2967, 3467, 4062 |
| BfaI | CTAG | 6 cut(s) | 537, 1593, 3626, 3758, 3911, 4277 |
| BfmI | CTRYAG | 3 cut(s) | 113, 2236, 2918 |
| BfoI | RGCGCY | 2 cut(s) | 2789, 3847 |
| BfrI | CTTAAG | 2 cut(s) | 908, 1082 |
| BfuAI | ACCTGC | 1 cut(s) | 3426 |
| BfuI | GTATCC | 1 cut(s) | 3590 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 1508 |
| BglII | AGATCT | 3 cut(s) | 693, 3754, 3760 |
| BmcAI | AGTACT | 3 cut(s) | 1236, 1736, 3218 |
| Bme1390I | CCNGG | 3 cut(s) | 489, 4011, 4605 |
| Bme18I | GGWCC | 6 cut(s) | 338, 509, 2100, 4610, 4640, 4714 |
| BmeT110I | CYCGRG | 3 cut(s) | 63, 1450, 3475 |
| BmiI | GGNNCC | 9 cut(s) | 976, 1814, 2101, 2156, 3123, 3198, 3902, 4431, 4715 |
| BmrFI | CCNGG | 3 cut(s) | 489, 4011, 4605 |
| BmrI | ACTGGG | 2 cut(s) | 456, 1226 |
| BmuI | ACTGGG | 2 cut(s) | 456, 1226 |
| BpiI | GAAGAC | 3 cut(s) | 537, 646, 1919 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 4106, 4138 |
| BpmI | CTGGAG | 7 cut(s) | 20, 880, 1008, 1536, 2795, 3233, 4626 |
| Bpu10I | CCTNAGC | 3 cut(s) | 918, 3569, 4194 |
| Bpu14I | TTCGAA | 3 cut(s) | 2295, 2851, 4556 |
| BpuEI | CTTGAG | 5 cut(s) | 272, 1385, 1943, 2125, 3094 |
| Bsa29I | ATCGAT | 1 cut(s) | 3972 |
| BsaAI | YACGTR | 2 cut(s) | 824, 947 |
| BsaBI | GATNNNNATC | 3 cut(s) | 570, 3253, 3759 |
| BsaHI | GRCGYC | 2 cut(s) | 4199, 4239 |
| BsaJI | CCNNGG | 5 cut(s) | 62, 881, 4125, 4419, 4643 |
| BsaWI | WCCGGW | 1 cut(s) | 3040 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 853, 883, 3188, 3218 |
| Bsc4I | CCNNNNNNNGG | 9 cut(s) | 518, 730, 986, 1553, 2387, 2611, 3047, 3482, 4016 |
| Bse21I | CCTNAGG | 1 cut(s) | 4140 |
| Bse3DI | GCAATG | 4 cut(s) | 678, 890, 1482, 2084 |
| Bse8I | GATNNNNATC | 3 cut(s) | 570, 3253, 3759 |
| BseAI | TCCGGA | 1 cut(s) | 3040 |
| BseBI | CCWGG | 3 cut(s) | 489, 4011, 4605 |
| BseCI | ATCGAT | 1 cut(s) | 3972 |
| BseDI | CCNNGG | 5 cut(s) | 62, 881, 4125, 4419, 4643 |
| BseJI | GATNNNNATC | 3 cut(s) | 570, 3253, 3759 |
| BseLI | CCNNNNNNNGG | 9 cut(s) | 518, 730, 986, 1553, 2387, 2611, 3047, 3482, 4016 |
| BseMI | GCAATG | 4 cut(s) | 678, 890, 1482, 2084 |
| BseMII | CTCAG | 9 cut(s) | 779, 800, 1229, 1842, 2445, 2972, 3583, 3711, 4185 |
| BseRI | GAGGAG | 7 cut(s) | 111, 182, 398, 636, 2373, 3495, 4263 |
| BseSI | GKGCMC | 3 cut(s) | 2158, 2748, 3905 |
| BseYI | CCCAGC | 1 cut(s) | 979 |
| BsgI | GTGCAG | 1 cut(s) | 4116 |
| Bsh1236I | CGCG | 3 cut(s) | 279, 3450, 4645 |
| BshFI | GGCC | 8 cut(s) | 484, 1502, 2156, 2391, 2432, 2720, 3270, 4030 |
| BshNI | GGYRCC | 4 cut(s) | 1812, 3121, 3900, 4429 |
| BshVI | ATCGAT | 1 cut(s) | 3972 |
| BsiHKAI | GWGCWC | 4 cut(s) | 866, 1749, 2235, 2748 |
| BsiHKCI | CYCGRG | 3 cut(s) | 63, 1450, 3475 |
| BsiSI | CCGG | 1 cut(s) | 3041 |
| BslFI | GGGAC | 4 cut(s) | 694, 1393, 2113, 4610 |
| BslI | CCNNNNNNNGG | 9 cut(s) | 518, 730, 986, 1553, 2387, 2611, 3047, 3482, 4016 |
| BsmAI | GTCTC | 7 cut(s) | 1512, 1616, 1795, 2940, 2967, 3467, 4062 |
| BsmFI | GGGAC | 4 cut(s) | 694, 1393, 2113, 4610 |
| BsmI | GAATGC | 1 cut(s) | 29 |
| BsnI | GGCC | 8 cut(s) | 484, 1502, 2156, 2391, 2432, 2720, 3270, 4030 |
| BsoBI | CYCGRG | 3 cut(s) | 63, 1450, 3475 |
| Bsp119I | TTCGAA | 3 cut(s) | 2295, 2851, 4556 |
| Bsp120I | GGGCCC | 1 cut(s) | 2154 |
| Bsp1286I | GDGCHC | 7 cut(s) | 866, 979, 1749, 2158, 2235, 2748, 3905 |
| Bsp13I | TCCGGA | 1 cut(s) | 3040 |
| Bsp19I | CCATGG | 2 cut(s) | 881, 4419 |
| BspANI | GGCC | 8 cut(s) | 484, 1502, 2156, 2391, 2432, 2720, 3270, 4030 |
| BspCNI | CTCAG | 9 cut(s) | 778, 801, 1230, 1843, 2446, 2971, 3582, 3710, 4186 |
| BspDI | ATCGAT | 1 cut(s) | 3972 |
| BspEI | TCCGGA | 1 cut(s) | 3040 |
| BspFNI | CGCG | 3 cut(s) | 279, 3450, 4645 |
| BspHI | TCATGA | 1 cut(s) | 3669 |
| BspLI | GGNNCC | 9 cut(s) | 976, 1814, 2101, 2156, 3123, 3198, 3902, 4431, 4715 |
| BspMAI | CTGCAG | 3 cut(s) | 117, 2240, 2922 |
| BspMI | ACCTGC | 1 cut(s) | 3426 |
| BspPI | GGATC | 5 cut(s) | 566, 3033, 3243, 3945, 4695 |
| BspT104I | TTCGAA | 3 cut(s) | 2295, 2851, 4556 |
| BspT107I | GGYRCC | 4 cut(s) | 1812, 3121, 3900, 4429 |
| BspTI | CTTAAG | 2 cut(s) | 908, 1082 |
| BsrBI | CCGCTC | 2 cut(s) | 2205, 4486 |
| BsrDI | GCAATG | 4 cut(s) | 678, 890, 1482, 2084 |
| BssECI | CCNNGG | 5 cut(s) | 62, 881, 4125, 4419, 4643 |
| BssNAI | GTATAC | 1 cut(s) | 2660 |
| BssNI | GRCGYC | 2 cut(s) | 4199, 4239 |
| BssT1I | CCWWGG | 2 cut(s) | 881, 4419 |
| Bst1107I | GTATAC | 1 cut(s) | 2660 |
| Bst2UI | CCWGG | 3 cut(s) | 489, 4011, 4605 |
| Bst6I | CTCTTC | 6 cut(s) | 1268, 2144, 2667, 2871, 3582, 3624 |
| BstACI | GRCGYC | 2 cut(s) | 4199, 4239 |
| BstAFI | CTTAAG | 2 cut(s) | 908, 1082 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 959, 2029 |
| BstBAI | YACGTR | 2 cut(s) | 824, 947 |
| BstBI | TTCGAA | 3 cut(s) | 2295, 2851, 4556 |
| BstDSI | CCRYGG | 4 cut(s) | 881, 4125, 4419, 4643 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 728 |
| BstFNI | CGCG | 3 cut(s) | 279, 3450, 4645 |
| BstH2I | RGCGCY | 2 cut(s) | 2789, 3847 |
| BstHHI | GCGC | 4 cut(s) | 2788, 3846, 4213, 4219 |
| BstMAI | GTCTC | 7 cut(s) | 1512, 1616, 1795, 2940, 2967, 3467, 4062 |
| BstMWI | GCNNNNNNNGC | 9 cut(s) | 146, 289, 959, 983, 1508, 2029, 2153, 4190, 4219 |
| BstNI | CCWGG | 3 cut(s) | 489, 4011, 4605 |
| BstNSI | RCATGY | 5 cut(s) | 870, 1049, 1863, 1867, 2518 |
| BstSCI | CCNGG | 3 cut(s) | 487, 4009, 4603 |
| BstSFI | CTRYAG | 3 cut(s) | 113, 2236, 2918 |
| BstSLI | GKGCMC | 3 cut(s) | 2158, 2748, 3905 |
| BstUI | CGCG | 3 cut(s) | 279, 3450, 4645 |
| BstV2I | GAAGAC | 3 cut(s) | 537, 646, 1919 |
| BstX2I | RGATCY | 5 cut(s) | 693, 3025, 3248, 3754, 3760 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 2635 |
| BstYI | RGATCY | 5 cut(s) | 693, 3025, 3248, 3754, 3760 |
| BstZ17I | GTATAC | 1 cut(s) | 2660 |
| Bsu15I | ATCGAT | 1 cut(s) | 3972 |
| Bsu36I | CCTNAGG | 1 cut(s) | 4140 |
| BsuI | GTATCC | 1 cut(s) | 3590 |
| BsuRI | GGCC | 8 cut(s) | 484, 1502, 2156, 2391, 2432, 2720, 3270, 4030 |
| BsuTUI | ATCGAT | 1 cut(s) | 3972 |
| BtgI | CCRYGG | 4 cut(s) | 881, 4125, 4419, 4643 |
| BtsI | GCAGTG | 3 cut(s) | 198, 1114, 4133 |
| BveI | ACCTGC | 1 cut(s) | 3426 |
| CaiI | CAGNNNCTG | 2 cut(s) | 43, 986 |
| CciI | TCATGA | 1 cut(s) | 3669 |
| CfoI | GCGC | 4 cut(s) | 2788, 3846, 4213, 4219 |
| Cfr42I | CCGCGG | 1 cut(s) | 4646 |
| ClaI | ATCGAT | 1 cut(s) | 3972 |
| CseI | GACGC | 3 cut(s) | 542, 2912, 4188 |
| CsiI | ACCWGGT | 2 cut(s) | 487, 4009 |
| Csp6I | GTAC | 7 cut(s) | 317, 1235, 1735, 1813, 3122, 3217, 4726 |
| CviQI | GTAC | 7 cut(s) | 317, 1235, 1735, 1813, 3122, 3217, 4726 |
| DraI | TTTAAA | 3 cut(s) | 1002, 4264, 4503 |
| EaeI | YGGCCR | 3 cut(s) | 2389, 2430, 2718 |
| Eam1104I | CTCTTC | 6 cut(s) | 1268, 2144, 2667, 2871, 3582, 3624 |
| EarI | CTCTTC | 6 cut(s) | 1268, 2144, 2667, 2871, 3582, 3624 |
| EciI | GGCGGA | 1 cut(s) | 3765 |
| Eco130I | CCWWGG | 2 cut(s) | 881, 4419 |
| Eco24I | GRGCYC | 2 cut(s) | 979, 2158 |
| Eco32I | GATATC | 2 cut(s) | 235, 1399 |
| Eco47I | GGWCC | 6 cut(s) | 338, 509, 2100, 4610, 4640, 4714 |
| Eco57I | CTGAAG | 5 cut(s) | 1653, 3563, 3860, 4057, 4649 |
| Eco72I | CACGTG | 1 cut(s) | 947 |
| Eco81I | CCTNAGG | 1 cut(s) | 4140 |
| Eco88I | CYCGRG | 3 cut(s) | 63, 1450, 3475 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 728 |
| EcoO109I | RGGNCCY | 5 cut(s) | 338, 2100, 2154, 4610, 4714 |
| EcoRI | GAATTC | 1 cut(s) | 1963 |
| EcoRII | CCWGG | 3 cut(s) | 487, 4009, 4603 |
| EcoRV | GATATC | 2 cut(s) | 235, 1399 |
| EcoT14I | CCWWGG | 2 cut(s) | 881, 4419 |
| EcoT22I | ATGCAT | 3 cut(s) | 1482, 1865, 2579 |
| EcoT38I | GRGCYC | 2 cut(s) | 979, 2158 |
| ErhI | CCWWGG | 2 cut(s) | 881, 4419 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1265, 1297 |
| FaqI | GGGAC | 4 cut(s) | 694, 1393, 2113, 4610 |
| FauI | CCCGC | 2 cut(s) | 637, 1734 |
| FbaI | TGATCA | 1 cut(s) | 3526 |
| FblI | GTMKAC | 2 cut(s) | 2659, 3825 |
| FriOI | GRGCYC | 2 cut(s) | 979, 2158 |
| FspBI | CTAG | 6 cut(s) | 537, 1593, 3626, 3758, 3911, 4277 |
| GlaI | GCGC | 4 cut(s) | 2787, 3845, 4212, 4218 |
| GsaI | CCCAGC | 1 cut(s) | 983 |
| GsuI | CTGGAG | 7 cut(s) | 20, 880, 1008, 1536, 2795, 3233, 4626 |
| HaeII | RGCGCY | 2 cut(s) | 2789, 3847 |
| HaeIII | GGCC | 8 cut(s) | 484, 1502, 2156, 2391, 2432, 2720, 3270, 4030 |
| HapII | CCGG | 1 cut(s) | 3041 |
| HgaI | GACGC | 3 cut(s) | 542, 2912, 4188 |
| HhaI | GCGC | 4 cut(s) | 2788, 3846, 4213, 4219 |
| Hin1I | GRCGYC | 2 cut(s) | 4199, 4239 |
| Hin6I | GCGC | 4 cut(s) | 2786, 3844, 4211, 4217 |
| HinP1I | GCGC | 4 cut(s) | 2786, 3844, 4211, 4217 |
| HincII | GTYRAC | 3 cut(s) | 57, 1857, 2013 |
| HindII | GTYRAC | 3 cut(s) | 57, 1857, 2013 |
| HindIII | AAGCTT | 7 cut(s) | 88, 290, 322, 2258, 2585, 2846, 4658 |
| HpaI | GTTAAC | 1 cut(s) | 57 |
| HpaII | CCGG | 1 cut(s) | 3041 |
| Hpy99I | CGWCG | 5 cut(s) | 242, 2928, 4204, 4241, 4244 |
| HpyCH4IV | ACGT | 9 cut(s) | 823, 946, 1150, 1883, 1951, 2339, 2504, 4056, 4239 |
| HpyF10VI | GCNNNNNNNGC | 9 cut(s) | 146, 289, 959, 983, 1508, 2029, 2153, 4190, 4219 |
| HpySE526I | ACGT | 9 cut(s) | 823, 946, 1150, 1883, 1951, 2339, 2504, 4056, 4239 |
| Hsp92I | GRCGYC | 2 cut(s) | 4199, 4239 |
| HspAI | GCGC | 4 cut(s) | 2786, 3844, 4211, 4217 |
| Kpn2I | TCCGGA | 1 cut(s) | 3040 |
| KpnI | GGTACC | 2 cut(s) | 1816, 3125 |
| Ksp22I | TGATCA | 1 cut(s) | 3526 |
| KspAI | GTTAAC | 1 cut(s) | 57 |
| KspI | CCGCGG | 1 cut(s) | 4646 |
| LmnI | GCTCC | 8 cut(s) | 861, 904, 914, 974, 1420, 2202, 3196, 3798 |
| MabI | ACCWGGT | 2 cut(s) | 487, 4009 |
| MaeI | CTAG | 6 cut(s) | 537, 1593, 3626, 3758, 3911, 4277 |
| MaeII | ACGT | 9 cut(s) | 823, 946, 1150, 1883, 1951, 2339, 2504, 4056, 4239 |
| MbiI | CCGCTC | 2 cut(s) | 2205, 4486 |
| MfeI | CAATTG | 6 cut(s) | 141, 1727, 2192, 2688, 3317, 3530 |
| MflI | RGATCY | 5 cut(s) | 693, 3025, 3248, 3754, 3760 |
| MhlI | GDGCHC | 7 cut(s) | 866, 979, 1749, 2158, 2235, 2748, 3905 |
| MlsI | TGGCCA | 3 cut(s) | 2391, 2432, 2720 |
| MluNI | TGGCCA | 3 cut(s) | 2391, 2432, 2720 |
| MlyI | GAGTC | 8 cut(s) | 633, 1564, 1862, 2008, 2231, 3092, 3711, 3807 |
| MmeI | TCCRAC | 9 cut(s) | 483, 731, 2092, 2205, 2472, 2906, 2923, 3519, 4045 |
| Mox20I | TGGCCA | 3 cut(s) | 2391, 2432, 2720 |
| Mph1103I | ATGCAT | 3 cut(s) | 1482, 1865, 2579 |
| MroI | TCCGGA | 1 cut(s) | 3040 |
| MroXI | GAANNNNTTC | 5 cut(s) | 876, 2796, 3104, 3540, 4661 |
| MscI | TGGCCA | 3 cut(s) | 2391, 2432, 2720 |
| MslI | CAYNNNNRTG | 7 cut(s) | 472, 2094, 2751, 2890, 3668, 4161, 4326 |
| Msp20I | TGGCCA | 3 cut(s) | 2391, 2432, 2720 |
| MspA1I | CMGCKG | 6 cut(s) | 149, 178, 986, 3988, 4184, 4645 |
| MspCI | CTTAAG | 2 cut(s) | 908, 1082 |
| MspI | CCGG | 1 cut(s) | 3041 |
| MspR9I | CCNGG | 3 cut(s) | 489, 4011, 4605 |
| MunI | CAATTG | 6 cut(s) | 141, 1727, 2192, 2688, 3317, 3530 |
| Mva1269I | GAATGC | 1 cut(s) | 29 |
| MvaI | CCWGG | 3 cut(s) | 489, 4011, 4605 |
| MvnI | CGCG | 3 cut(s) | 279, 3450, 4645 |
| MwoI | GCNNNNNNNGC | 9 cut(s) | 146, 289, 959, 983, 1508, 2029, 2153, 4190, 4219 |
| NcoI | CCATGG | 2 cut(s) | 881, 4419 |
| NlaIV | GGNNCC | 9 cut(s) | 976, 1814, 2101, 2156, 3123, 3198, 3902, 4431, 4715 |
| NmuCI | GTSAC | 7 cut(s) | 442, 733, 757, 937, 3305, 3991, 4076 |
| NsiI | ATGCAT | 3 cut(s) | 1482, 1865, 2579 |
| NspI | RCATGY | 5 cut(s) | 870, 1049, 1863, 1867, 2518 |
| NspV | TTCGAA | 3 cut(s) | 2295, 2851, 4556 |
| OliI | CACNNNNGTG | 1 cut(s) | 2751 |
| PaeI | GCATGC | 1 cut(s) | 1867 |
| PagI | TCATGA | 1 cut(s) | 3669 |
| PciI | ACATGT | 1 cut(s) | 866 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 237 |
| PctI | GAATGC | 1 cut(s) | 29 |
| PdmI | GAANNNNTTC | 5 cut(s) | 876, 2796, 3104, 3540, 4661 |
| PfeI | GAWTC | 7 cut(s) | 427, 1784, 2373, 2639, 3239, 3881, 3914 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 986 |
| PleI | GAGTC | 8 cut(s) | 632, 1564, 1861, 2008, 2230, 3091, 3711, 3807 |
| PmaCI | CACGTG | 1 cut(s) | 947 |
| PmlI | CACGTG | 1 cut(s) | 947 |
| PpsI | GAGTC | 8 cut(s) | 632, 1564, 1861, 2008, 2230, 3091, 3711, 3807 |
| Ppu21I | YACGTR | 2 cut(s) | 824, 947 |
| PpuMI | RGGWCCY | 4 cut(s) | 338, 2100, 4610, 4714 |
| PscI | ACATGT | 1 cut(s) | 866 |
| PshBI | ATTAAT | 2 cut(s) | 1334, 1835 |
| PsiI | TTATAA | 1 cut(s) | 2700 |
| Psp5II | RGGWCCY | 4 cut(s) | 338, 2100, 4610, 4714 |
| Psp6I | CCWGG | 3 cut(s) | 487, 4009, 4603 |
| PspCI | CACGTG | 1 cut(s) | 947 |
| PspFI | CCCAGC | 1 cut(s) | 979 |
| PspGI | CCWGG | 3 cut(s) | 487, 4009, 4603 |
| PspN4I | GGNNCC | 9 cut(s) | 976, 1814, 2101, 2156, 3123, 3198, 3902, 4431, 4715 |
| PspOMI | GGGCCC | 1 cut(s) | 2154 |
| PspPPI | RGGWCCY | 4 cut(s) | 338, 2100, 4610, 4714 |
| PstI | CTGCAG | 3 cut(s) | 117, 2240, 2922 |
| PstNI | CAGNNNCTG | 2 cut(s) | 43, 986 |
| PsuI | RGATCY | 5 cut(s) | 693, 3025, 3248, 3754, 3760 |
| PvuII | CAGCTG | 2 cut(s) | 178, 4184 |
| RsaI | GTAC | 7 cut(s) | 318, 1236, 1736, 1814, 3123, 3218, 4727 |
| RsaNI | GTAC | 7 cut(s) | 317, 1235, 1735, 1813, 3122, 3217, 4726 |
| RseI | CAYNNNNRTG | 7 cut(s) | 472, 2094, 2751, 2890, 3668, 4161, 4326 |
| SacII | CCGCGG | 1 cut(s) | 4646 |
| ScaI | AGTACT | 3 cut(s) | 1236, 1736, 3218 |
| SchI | GAGTC | 8 cut(s) | 633, 1564, 1862, 2008, 2231, 3092, 3711, 3807 |
| ScrFI | CCNGG | 3 cut(s) | 489, 4011, 4605 |
| SduI | GDGCHC | 7 cut(s) | 866, 979, 1749, 2158, 2235, 2748, 3905 |
| SexAI | ACCWGGT | 2 cut(s) | 487, 4009 |
| SfcI | CTRYAG | 3 cut(s) | 113, 2236, 2918 |
| Sfr303I | CCGCGG | 1 cut(s) | 4646 |
| SfuI | TTCGAA | 3 cut(s) | 2295, 2851, 4556 |
| SgrBI | CCGCGG | 1 cut(s) | 4646 |
| SinI | GGWCC | 6 cut(s) | 338, 509, 2100, 4610, 4640, 4714 |
| SmiMI | CAYNNNNRTG | 7 cut(s) | 472, 2094, 2751, 2890, 3668, 4161, 4326 |
| SmlI | CTYRAG | 7 cut(s) | 287, 908, 1082, 1364, 1958, 2104, 3073 |
| SmoI | CTYRAG | 7 cut(s) | 287, 908, 1082, 1364, 1958, 2104, 3073 |
| SphI | GCATGC | 1 cut(s) | 1867 |
| SspI | AATATT | 3 cut(s) | 1412, 1890, 4498 |
| SspMI | CTAG | 6 cut(s) | 537, 1593, 3626, 3758, 3911, 4277 |
| StyD4I | CCNGG | 3 cut(s) | 487, 4009, 4603 |
| StyI | CCWWGG | 2 cut(s) | 881, 4419 |
| TaiI | ACGT | 9 cut(s) | 826, 949, 1153, 1886, 1954, 2342, 2507, 4059, 4242 |
| TaqI | TCGA | 8 cut(s) | 237, 2295, 2371, 2851, 3006, 3972, 4202, 4556 |
| TaqII | GACCGA | 2 cut(s) | 1422, 1787 |
| TatI | WGTACW | 3 cut(s) | 1234, 1734, 3216 |
| TauI | GCSGC | 3 cut(s) | 29, 986, 2208 |
| TfiI | GAWTC | 7 cut(s) | 427, 1784, 2373, 2639, 3239, 3881, 3914 |
| TseFI | GTSAC | 7 cut(s) | 442, 733, 757, 937, 3305, 3991, 4076 |
| Tsp45I | GTSAC | 7 cut(s) | 442, 733, 757, 937, 3305, 3991, 4076 |
| TspGWI | ACGGA | 3 cut(s) | 197, 1777, 3279 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 986 |
| Vha464I | CTTAAG | 2 cut(s) | 908, 1082 |
| VneI | GTGCAC | 1 cut(s) | 2744 |
| VpaK11BI | GGWCC | 6 cut(s) | 338, 509, 2100, 4610, 4640, 4714 |
| VspI | ATTAAT | 2 cut(s) | 1334, 1835 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 728 |
| XapI | RAATTY | 6 cut(s) | 1069, 1316, 1963, 2297, 3163, 4750 |
| XbaI | TCTAGA | 2 cut(s) | 3625, 3757 |
| XceI | RCATGY | 5 cut(s) | 870, 1049, 1863, 1867, 2518 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 613 |
| XmiI | GTMKAC | 2 cut(s) | 2659, 3825 |
| XmnI | GAANNNNTTC | 5 cut(s) | 876, 2796, 3104, 3540, 4661 |
| XspI | CTAG | 6 cut(s) | 537, 1593, 3626, 3758, 3911, 4277 |
| ZraI | GACGTC | 1 cut(s) | 4240 |
| ZrmI | AGTACT | 3 cut(s) | 1236, 1736, 3218 |
| Zsp2I | ATGCAT | 3 cut(s) | 1482, 1865, 2579 |