Rh1BG109900

disease resistance

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr1B
OG0000070
Physical Location & Seq
Reverse (-)
18895829 .. 18897094
1266 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh1BG109900.1

Sequence Viewer

Length: 1266 bp
ATGTACCCAAGACGAGCCACATGCGTCTTATCCCCAGCTAATCACTTTGACTTTATCTTTCAACCTCATAATTCTGCAAAGATTTCTCAGTATCCTTCTTTACTTCATTTGCTTTGCTGCTTTCTTCTCTATTCTCTTTGCTCTTTACAACTAAAGTTGTACTTAATTCCTTTCAACAAAAGAATGGCAGTGGGAGAAGTCTTTCTTGCGGCATTCCTTCAGTTGCTGCTGAACAGGTTAACGCCTCGGGAGATCCTGGGCTACTTTGGAAGCTTGGGAGGAGTTGGCAAAAAGCTGCAGAAATTGAGGGAAACACTGTCCGCAGTTGCAGCGGTGCTTTACGACGCAGAGGATAAGCAGCTGACGAGCAAGGCAGTGGATCTGTGGCTGAATGATCTCAGACACTTGGCTTACGATATCGACGATCTACTCAACACCTTTTCTATAGAGATGTTAACACGCAAGCAGCTCAAGGTTCACCAAACTGGCACAAGCAAGGTACAAGGCTTCTTTACCAAAGTTCCTCACAAAGTTAAGTTCAATTTCAGTATGAAGTCCGAAATAGACGAGATTGCTAACCGCTTGCAAGACATATTTGACCGGAAAGAGAAACTCGGTTTGAAATATATTGAGCATGCCTCTACTTCAACATCATCATTGCAAAGGACACCAAGTTCGTGTGTGTTGGATGGACCTGTGGTTGGGAGAGATGAAGACGCAAGAAAAATAGTGGAGTTGTTGTCCAGAGATGCAGATCCTTCTTCTCCCACAAATTATGAGGTTGCTGCCATTGTTGGTATGGGAGGACTGGGCAAGACAACGCTTGCGGGACAAGTCTTCAATGATGTAGCTGCAATGGAACAATTTGATCTCAAGATCTGGGTTTCAGTATCCGATGACTTCGATCTTCAAATGGTGACGAGAACTATTTCTGAAAACGTCACATCTAGGCCATGTGATGATTTCAGTCGACTTCAAGATAATCTGAGCAAGGCGATAGATGGTAAAAAGTTTTTGATTGTTTTAGATGATGTCTGGAGCACGTGTGGTTATGATTCATGGACAAAACTGCAAGCTCCCTTCCGTGGGGGAGCTAAGGGAAGTAGGATACTGGTGACAACACGTGATGAAAAGGTGGCAGCATTGATGGGAGCCCCAGCCGCTGAAGTTTATTATTTAAATACTCTATCGGATGAAGGTTGTTTGCAACTATTTGAACAGCATGTTAGCAATCACTACGCCAATAATATGATCAGACGACAGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
NB-ARC

Protein Analysis

421

Amino Acids

47.29

Weight (kDa)

7.58

Isoelectric Point (pI)

41.84

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Rx_N PF18052 71 - 160 6e-20 Rx N-terminal domain
NB-ARC PF00931 239 - 411 7e-36 NB-ARC domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000070)

Species Orthologous Gene IDs
fragaria_vesca FvH4_7g00360 FvH4_7g00850 FvH4_7g02400 FvH4_7g02430 FvH4_7g02450 FvH4_7g25671 FvH4_7g25680 FvH4_7g25683 FvH4_7g26980 FvH4_7g27330 FvH4_7g27355 FvH4_7g27610 FvH4_7g27642 FvH4_7g27890 FvH4_7g27891 FvH4_7g27891 FvH4_7g27891 FvH4_7g28110 FvH4_7g28390
malus_domestica MD00G1070800.v1.1 MD00G1168000.v1.1 MD00G1168300.v1.1 MD00G1168700.v1.1 MD02G1293100.v1.1 MD02G1293200.v1.1 MD02G1314300.v1.1 MD03G1009000.v1.1 MD03G1009400.v1.1 MD03G1042300.v1.1 MD03G1042400.v1.1 MD07G1033600.v1.1 MD07G1033700.v1.1 MD07G1033900.v1.1 MD11G1011400.v1.1 MD11G1011700.v1.1 MD11G1029800.v1.1 MD11G1029900.v1.1 MD11G1030300.v1.1 MD11G1030400.v1.1 MD11G1030500.v1.1 MD11G1031300.v1.1 MD11G1031600.v1.1 MD11G1032000.v1.1 MD11G1033200.v1.1 MD11G1033600.v1.1 MD11G1033800.v1.1 MD11G1033900.v1.1 MD11G1034100.v1.1 MD11G1034400.v1.1 MD11G1040600.v1.1 MD11G1041100.v1.1 MD11G1043100.v1.1 MD11G1043500.v1.1 MD11G1044500.v1.1 MD11G1045100.v1.1 MD11G1045600.v1.1
prunus_persica Prupe.2G022400_v2.0.a1 Prupe.2G022400_v2.0.a1 Prupe.2G022400_v2.0.a1 Prupe.2G022500_v2.0.a1 Prupe.2G022500_v2.0.a1 Prupe.2G022900_v2.0.a1 Prupe.2G023500_v2.0.a1 Prupe.2G023500_v2.0.a1 Prupe.2G023500_v2.0.a1 Prupe.2G023500_v2.0.a1 Prupe.2G023500_v2.0.a1 Prupe.2G023500_v2.0.a1 Prupe.2G023600_v2.0.a1 Prupe.2G028000_v2.0.a1 Prupe.2G030200_v2.0.a1 Prupe.2G067600_v2.0.a1 Prupe.8G117900_v2.0.a1
pyrus_communis pycom02g26350 pycom03g03270 pycom07g02370 pycom11g00750 pycom11g00790 pycom11g02340 pycom11g02370 pycom11g02380 pycom11g02390 pycom11g02410 pycom11g02460 pycom11g02470 pycom11g02500 pycom11g02510 pycom11g02520 pycom11g02530 pycom11g02580 pycom11g02590 pycom11g02680 pycom11g02710 pycom11g02720 pycom11g02730 pycom11g02750 pycom11g02760 pycom11g02770 pycom11g03690 pycom13g25120 pycom13g25130 pycom13g25140 pycom13g25170 pycom13g25180 pycom13g25190 pycom13g25210
rosa_chinensis RchiOBHm_Chr1g0315001 RchiOBHm_Chr1g0315411 RchiOBHm_Chr1g0317951 RchiOBHm_Chr1g0319741 RchiOBHm_Chr1g0319841 RchiOBHm_Chr1g0319911 RchiOBHm_Chr1g0319991 RchiOBHm_Chr1g0320001 RchiOBHm_Chr1g0320021 RchiOBHm_Chr1g0320081 RchiOBHm_Chr1g0320111 RchiOBHm_Chr1g0320131 RchiOBHm_Chr1g0320161 RchiOBHm_Chr1g0320171 RchiOBHm_Chr1g0320241 RchiOBHm_Chr1g0320281 RchiOBHm_Chr1g0320411 RchiOBHm_Chr1g0320461 RchiOBHm_Chr1g0320551 RchiOBHm_Chr1g0320581 RchiOBHm_Chr1g0320661 RchiOBHm_Chr1g0320891 RchiOBHm_Chr1g0320971 RchiOBHm_Chr1g0321021 RchiOBHm_Chr1g0321031 RchiOBHm_Chr1g0321091 RchiOBHm_Chr1g0321351 RchiOBHm_Chr1g0321481 RchiOBHm_Chr1g0321491 RchiOBHm_Chr1g0327521 RchiOBHm_Chr1g0328061 RchiOBHm_Chr1g0334991 RchiOBHm_Chr1g0373781 RchiOBHm_Chr1g0373891 RchiOBHm_Chr1g0374841 RchiOBHm_Chr2g0131111 RchiOBHm_Chr2g0131121 RchiOBHm_Chr4g0408901 RchiOBHm_Chr5g0041691 RchiOBHm_Chr7g0237021
rosa_laevigata RLG00000019168 RLG00000030456 RLG00000030460 RLG00000030571
rosa_multiflora Rmu_co7963468.1_g000001 Rmu_co7991248.1_g000001 Rmu_co8195256.1_g000001 Rmu_co8312199.1_g000001 Rmu_co8349215.1_g000001 Rmu_co8351041.1_g000001 Rmu_co8422719.1_g000001 Rmu_co8450711.1_g000001 Rmu_co8465555.1_g000001 Rmu_co8489965.1_g000001 Rmu_sc0000087.1_g000014 Rmu_sc0000272.1_g000015 Rmu_sc0000724.1_g000006 Rmu_sc0000724.1_g000021 Rmu_sc0000724.1_g000022 Rmu_sc0000861.1_g000024 Rmu_sc0001049.1_g000006 Rmu_sc0001049.1_g000007 Rmu_sc0001512.1_g000001 Rmu_sc0002022.1_g000004 Rmu_sc0002063.1_g000011 Rmu_sc0002131.1_g000024 Rmu_sc0002337.1_g000012 Rmu_sc0002341.1_g000005 Rmu_sc0002539.1_g000117 Rmu_sc0002745.1_g000005 Rmu_sc0002745.1_g000006 Rmu_sc0003145.1_g000002 Rmu_sc0003199.1_g000007 Rmu_sc0003270.1_g000039 Rmu_sc0003270.1_g000040 Rmu_sc0003423.1_g000001 Rmu_sc0003423.1_g000002 Rmu_sc0003629.1_g000067 Rmu_sc0004039.1_g000002 Rmu_sc0004555.1_g000001 Rmu_sc0004555.1_g000005 Rmu_sc0004555.1_g000006 Rmu_sc0004947.1_g000025 Rmu_sc0004947.1_g000026 Rmu_sc0005255.1_g000025 Rmu_sc0007977.1_g000016 Rmu_sc0008752.1_g000005 Rmu_sc0009236.1_g000004 Rmu_sc0009236.1_g000008 Rmu_sc0009236.1_g000009 Rmu_sc0009236.1_g000010 Rmu_sc0011424.1_g000036 Rmu_sc0013413.1_g000001 Rmu_sc0013735.1_g000002 Rmu_sc0015304.1_g000002 Rmu_sc0015304.1_g000003 Rmu_sc0015585.1_g000001 Rmu_sc0018410.1_g000001 Rmu_sc0022723.1_g000001 Rmu_sc0022723.1_g000002 Rmu_sc0022724.1_g000001 Rmu_sc0023430.1_g000001 Rmu_sc0026053.1_g000001 Rmu_sc0026429.1_g000002 Rmu_sc0026647.1_g000001 Rmu_sc0031359.1_g000001 Rmu_ssc0000042.1_g000040 Rmu_ssc0000081.1_g000001 Rmu_ssc0000300.1_g000011
rosa_roxburghii Rroxscaffold_160G00433620 Rroxscaffold_160G00433990 Rroxscaffold_1G00038820 Rroxscaffold_2G00113190 Rroxscaffold_4G00283240 Rroxscaffold_4G00283930 Rroxscaffold_4G00284010 Rroxscaffold_4G00322600 Rroxscaffold_4G00327710 Rroxscaffold_4G00328100 Rroxscaffold_4G00328130 Rroxscaffold_4G00331590 Rroxscaffold_5G00353280
rosa_rugosa Rorug01G0004200 Rorug01G0018800 Rorug01G0018900 Rorug01G0029900 Rorug01G0030000 Rorug01G0030000 Rorug01G0030000 Rorug01G0030200 Rorug01G0030300 Rorug01G0030800 Rorug01G0032400 Rorug01G0032900 Rorug01G0055800 Rorug01G0067600 Rorug01G0067700 Rorug01G0067800 Rorug01G0067900 Rorug01G0068000 Rorug01G0379500 Rorug01G0379600 Rorug01G0379600 Rorug01G0385200 Rorug01G0385300 Rorug02G0295100 Rorug04G0088500 Rorug04G0088600 Rorug05G0194900 Rorug07G0301400
rosa_samantha Rh1AG014800 Rh1AG015200 Rh1AG030500 Rh1AG041800 Rh1AG042300 Rh1AG042700 Rh1AG042800 Rh1AG042900 Rh1AG045000 Rh1AG085100 Rh1AG085200 Rh1AG388600 Rh1AG396700 Rh1AG396900 Rh1BG007300 Rh1BG039200 Rh1BG039600 Rh1BG042800 Rh1BG067300 Rh1BG109700 Rh1BG109900 Rh1BG354000 Rh1CG043800 Rh1CG044400 Rh1DG008600 Rh1DG022900 Rh1DG023400 Rh1DG023600 Rh1DG023900 Rh1DG024100 Rh1DG024400 Rh1DG024500 Rh1DG025500 Rh1DG025700 Rh1DG026500 Rh1DG026800 Rh1DG038900 Rh1DG048800 Rh1DG049300 Rh1DG051700 Rh1DG052000 Rh1DG146200 Rh1DG383500 Rh2BG354900 Rh2CG333600 Rh4BG149600 Rh4BG149700 Rh4CG160600
rosa_wichuraiana Rw0G001100 Rw0G001130 Rw0G001180 Rw0G012580 Rw1G003480 Rw1G003540 Rw1G003600 Rw1G003640 Rw1G003670 Rw1G003750 Rw1G003940 Rw1G006650 Rw1G034550 Rw1G034560 Rw1G034650 Rw1G034660 Rw1G035170 Rw1G035190 Rw1G037060 Rw2G028210 Rw4G012540 Rw5G026370 Rw7G037900

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 970
AciI CCGC 6 cut(s) 209, 321, 332, 580, 827, 1161
AclWI GGATC 3 cut(s) 247, 387, 749
AcuI CTGAAG 2 cut(s) 203, 1185
AcvI CACGTG 2 cut(s) 1044, 1124
AfaI GTAC 3 cut(s) 5, 161, 501
AfiI CCNNNNNNNGG 3 cut(s) 701, 1085, 1086
AflIII ACRYGT 2 cut(s) 1043, 1121
AgsI TTSAA 9 cut(s) 62, 175, 541, 622, 648, 841, 911, 977, 1217
AjnI CCWGG 1 cut(s) 255
AloI GAACNNNNNNTCC 2 cut(s) 658, 690
AluBI AGCT 8 cut(s) 38, 273, 295, 361, 469, 851, 1076, 1094
AluI AGCT 8 cut(s) 38, 273, 295, 361, 469, 851, 1076, 1094
Alw21I GWGCWC 1 cut(s) 1043
AlwI GGATC 3 cut(s) 247, 387, 749
AlwNI CAGNNNCTG 2 cut(s) 226, 1163
Ama87I CYCGRG 1 cut(s) 246
AoxI GGCC 1 cut(s) 950
ApeKI GCWGC 9 cut(s) 117, 226, 295, 329, 358, 466, 785, 851, 1139
ArsI GACNNNNNNTTYG 2 cut(s) 658, 690
Asp700I GAANNNNTTC 2 cut(s) 201, 928
AspS9I GGNCC 1 cut(s) 692
AsuHPI GGTGA 3 cut(s) 470, 928, 1126
AvaI CYCGRG 1 cut(s) 246
AvaII GGWCC 1 cut(s) 692
BanII GRGCYC 1 cut(s) 1156
BbrPI CACGTG 2 cut(s) 1044, 1124
BbsI GAAGAC 2 cut(s) 720, 829
Bbv12I GWGCWC 1 cut(s) 1043
BbvI GCAGC 9 cut(s) 104, 213, 282, 341, 370, 478, 772, 838, 1151
BccI CCATC 3 cut(s) 683, 995, 1141
BcgI CGANNNNNNTGC 1 cut(s) 37
BciT130I CCWGG 1 cut(s) 257
BciVI GTATCC 3 cut(s) 102, 901, 1101
BclI TGATCA 1 cut(s) 1251
BfaI CTAG 1 cut(s) 948
BfmI CTRYAG 2 cut(s) 296, 444
BfuI GTATCC 3 cut(s) 102, 901, 1101
BglII AGATCT 1 cut(s) 876
Bme1390I CCNGG 1 cut(s) 257
Bme18I GGWCC 1 cut(s) 692
BmeT110I CYCGRG 1 cut(s) 246
BmgT120I GGNCC 1 cut(s) 692
BmiI GGNNCC 1 cut(s) 1153
BmrFI CCNGG 1 cut(s) 257
BmrI ACTGGG 1 cut(s) 818
BmsI GCATC 1 cut(s) 739
BmuI ACTGGG 1 cut(s) 818
BpiI GAAGAC 2 cut(s) 720, 829
BplI GAGNNNNNCTC 2 cut(s) 623, 655
BpmI CTGGAG 1 cut(s) 1057
Bpu10I CCTNAGC 1 cut(s) 1095
BpuEI CTTGAG 2 cut(s) 455, 857
BsaAI YACGTR 2 cut(s) 1044, 1124
BsaBI GATNNNNATC 1 cut(s) 753
BsaJI CCNNGG 3 cut(s) 245, 256, 1084
BsaWI WCCGGW 1 cut(s) 600
BsaXI ACNNNNNCTCC 4 cut(s) 725, 755, 1030, 1060
Bsc4I CCNNNNNNNGG 3 cut(s) 701, 1085, 1086
Bse1I ACTGG 3 cut(s) 490, 813, 1116
Bse3DI GCAATG 2 cut(s) 656, 861
Bse8I GATNNNNATC 1 cut(s) 753
BseBI CCWGG 1 cut(s) 257
BseDI CCNNGG 3 cut(s) 245, 256, 1084
BseGI GGATG 2 cut(s) 694, 1198
BseJI GATNNNNATC 1 cut(s) 753
BseLI CCNNNNNNNGG 3 cut(s) 701, 1085, 1086
BseMI GCAATG 2 cut(s) 656, 861
BseMII CTCAG 3 cut(s) 101, 412, 977
BseNI ACTGG 3 cut(s) 490, 813, 1116
BseRI GAGGAG 1 cut(s) 294
BseXI GCAGC 9 cut(s) 104, 213, 282, 341, 370, 478, 772, 838, 1151
BseYI CCCAGC 2 cut(s) 34, 1156
BshFI GGCC 1 cut(s) 952
BsiHKAI GWGCWC 1 cut(s) 1043
BsiHKCI CYCGRG 1 cut(s) 246
BsiSI CCGG 1 cut(s) 601
BslFI GGGAC 1 cut(s) 843
BslI CCNNNNNNNGG 3 cut(s) 701, 1085, 1086
BsmFI GGGAC 1 cut(s) 843
BsmI GAATGC 1 cut(s) 212
BsnI GGCC 1 cut(s) 952
BsoBI CYCGRG 1 cut(s) 246
Bsp1286I GDGCHC 2 cut(s) 1043, 1156
Bsp143I GATC 9 cut(s) 252, 379, 394, 424, 754, 868, 876, 904, 1251
BspACI CCGC 6 cut(s) 209, 321, 332, 580, 827, 1161
BspANI GGCC 1 cut(s) 952
BspCNI CTCAG 3 cut(s) 100, 411, 978
BspLI GGNNCC 1 cut(s) 1153
BspMAI CTGCAG 1 cut(s) 300
BspPI GGATC 3 cut(s) 247, 387, 749
BsrDI GCAATG 2 cut(s) 656, 861
BsrI ACTGG 3 cut(s) 490, 813, 1116
BssECI CCNNGG 3 cut(s) 245, 256, 1084
BssMI GATC 9 cut(s) 252, 379, 394, 424, 754, 868, 876, 904, 1251
Bst2UI CCWGG 1 cut(s) 257
Bst4CI ACNGT 2 cut(s) 318, 1263
BstBAI YACGTR 2 cut(s) 1044, 1124
BstC8I GCNNGC 5 cut(s) 464, 584, 636, 825, 1074
BstDEI CTNAG 4 cut(s) 87, 398, 986, 1095
BstDSI CCRYGG 1 cut(s) 1084
BstF5I GGATG 2 cut(s) 694, 1198
BstKTI GATC 9 cut(s) 255, 382, 397, 427, 757, 871, 879, 907, 1254
BstMBI GATC 9 cut(s) 252, 379, 394, 424, 754, 868, 876, 904, 1251
BstMWI GCNNNNNNNGC 2 cut(s) 329, 1160
BstNI CCWGG 1 cut(s) 257
BstNSI RCATGY 3 cut(s) 24, 638, 1226
BstSCI CCNGG 1 cut(s) 255
BstSFI CTRYAG 2 cut(s) 296, 444
BstV1I GCAGC 9 cut(s) 104, 213, 282, 341, 370, 478, 772, 838, 1151
BstV2I GAAGAC 2 cut(s) 720, 829
BstX2I RGATCY 4 cut(s) 252, 379, 754, 876
BstYI RGATCY 4 cut(s) 252, 379, 754, 876
BsuI GTATCC 3 cut(s) 102, 901, 1101
BsuRI GGCC 1 cut(s) 952
BtgI CCRYGG 1 cut(s) 1084
BtsCI GGATG 2 cut(s) 694, 1198
BtsI GCAGTG 2 cut(s) 195, 381
BtsIMutI CAGTG 3 cut(s) 195, 314, 381
Cac8I GCNNGC 5 cut(s) 464, 584, 636, 825, 1074
CaiI CAGNNNCTG 2 cut(s) 226, 1163
Cfr13I GGNCC 1 cut(s) 692
CseI GACGC 3 cut(s) 13, 353, 725
Csp6I GTAC 3 cut(s) 4, 160, 500
CviAII CATG 5 cut(s) 21, 635, 954, 1059, 1223
CviQI GTAC 3 cut(s) 4, 160, 500
DdeI CTNAG 4 cut(s) 87, 398, 986, 1095
DpnI GATC 9 cut(s) 254, 381, 396, 426, 756, 870, 878, 906, 1253
DpnII GATC 9 cut(s) 252, 379, 394, 424, 754, 868, 876, 904, 1251
DraI TTTAAA 1 cut(s) 1179
Eco24I GRGCYC 1 cut(s) 1156
Eco32I GATATC 1 cut(s) 418
Eco47I GGWCC 1 cut(s) 692
Eco57I CTGAAG 2 cut(s) 203, 1185
Eco72I CACGTG 2 cut(s) 1044, 1124
Eco88I CYCGRG 1 cut(s) 246
EcoRII CCWGG 1 cut(s) 255
EcoRV GATATC 1 cut(s) 418
EcoT38I GRGCYC 1 cut(s) 1156
FaeI CATG 5 cut(s) 24, 638, 957, 1062, 1226
FalI AAGNNNNNCTT 4 cut(s) 146, 178, 189, 221
FaqI GGGAC 1 cut(s) 843
FatI CATG 5 cut(s) 20, 634, 953, 1058, 1222
FauI CCCGC 1 cut(s) 820
FbaI TGATCA 1 cut(s) 1251
FblI GTMKAC 1 cut(s) 970
FokI GGATG 2 cut(s) 701, 1205
FriOI GRGCYC 1 cut(s) 1156
FspBI CTAG 1 cut(s) 948
GsaI CCCAGC 2 cut(s) 38, 1160
GsuI CTGGAG 1 cut(s) 1057
HaeIII GGCC 1 cut(s) 952
HapII CCGG 1 cut(s) 601
HgaI GACGC 3 cut(s) 13, 353, 725
Hin1II CATG 5 cut(s) 24, 638, 957, 1062, 1226
HincII GTYRAC 3 cut(s) 240, 456, 971
HindII GTYRAC 3 cut(s) 240, 456, 971
HindIII AAGCTT 1 cut(s) 271
HinfI GANTC 1 cut(s) 1055
HpaI GTTAAC 2 cut(s) 240, 456
HpaII CCGG 1 cut(s) 601
HphI GGTGA 3 cut(s) 470, 928, 1126
Hpy166II GTNNAC 4 cut(s) 240, 456, 478, 971
Hpy188I TCNGA 7 cut(s) 401, 559, 895, 934, 987, 1192, 1256
Hpy188III TCNNGA 5 cut(s) 248, 744, 874, 977, 1036
Hpy8I GTNNAC 4 cut(s) 240, 456, 478, 971
Hpy99I CGWCG 2 cut(s) 347, 425
HpyAV CCTTC 5 cut(s) 105, 227, 768, 1090, 1190
HpyCH4III ACNGT 2 cut(s) 318, 1263
HpyCH4IV ACGT 3 cut(s) 939, 1043, 1123
HpyCH4V TGCA 9 cut(s) 77, 298, 329, 586, 661, 752, 854, 1072, 1207
HpyF10VI GCNNNNNNNGC 2 cut(s) 329, 1160
HpyF3I CTNAG 4 cut(s) 87, 398, 986, 1095
HpySE526I ACGT 3 cut(s) 939, 1043, 1123
Hsp92II CATG 5 cut(s) 24, 638, 957, 1062, 1226
Ksp22I TGATCA 1 cut(s) 1251
KspAI GTTAAC 2 cut(s) 240, 456
Kzo9I GATC 9 cut(s) 252, 379, 394, 424, 754, 868, 876, 904, 1251
LmnI GCTCC 4 cut(s) 1038, 1081, 1091, 1151
Lsp1109I GCAGC 9 cut(s) 104, 213, 282, 341, 370, 478, 772, 838, 1151
LweI GCATC 1 cut(s) 739
MaeI CTAG 1 cut(s) 948
MaeII ACGT 3 cut(s) 939, 1043, 1123
MaeIII GTNAC 3 cut(s) 916, 940, 1114
MalI GATC 9 cut(s) 254, 381, 396, 426, 756, 870, 878, 906, 1253
MboI GATC 9 cut(s) 252, 379, 394, 424, 754, 868, 876, 904, 1251
MboII GAAGA 5 cut(s) 116, 725, 753, 829, 899
MflI RGATCY 4 cut(s) 252, 379, 754, 876
MhlI GDGCHC 2 cut(s) 1043, 1156
MluCI AATT 6 cut(s) 70, 165, 302, 541, 772, 863
MmeI TCCRAC 1 cut(s) 666
MnlI CCTC 9 cut(s) 75, 255, 272, 300, 343, 534, 649, 772, 797
MroXI GAANNNNTTC 2 cut(s) 201, 928
MseI TTAA 5 cut(s) 164, 239, 455, 534, 1178
MspA1I CMGCKG 3 cut(s) 332, 361, 1163
MspI CCGG 1 cut(s) 601
MspR9I CCNGG 1 cut(s) 257
Mva1269I GAATGC 1 cut(s) 212
MvaI CCWGG 1 cut(s) 257
MwoI GCNNNNNNNGC 2 cut(s) 329, 1160
NdeII GATC 9 cut(s) 252, 379, 394, 424, 754, 868, 876, 904, 1251
NlaIII CATG 5 cut(s) 24, 638, 957, 1062, 1226
NlaIV GGNNCC 1 cut(s) 1153
NmuCI GTSAC 3 cut(s) 916, 940, 1114
NspI RCATGY 3 cut(s) 24, 638, 1226
PaeI GCATGC 1 cut(s) 638
PcsI WCGNNNNNNNCGW 1 cut(s) 420
PctI GAATGC 1 cut(s) 212
PdmI GAANNNNTTC 2 cut(s) 201, 928
PfeI GAWTC 1 cut(s) 1055
PmaCI CACGTG 2 cut(s) 1044, 1124
PmlI CACGTG 2 cut(s) 1044, 1124
Ppu21I YACGTR 2 cut(s) 1044, 1124
Psp6I CCWGG 1 cut(s) 255
PspCI CACGTG 2 cut(s) 1044, 1124
PspFI CCCAGC 2 cut(s) 34, 1156
PspGI CCWGG 1 cut(s) 255
PspN4I GGNNCC 1 cut(s) 1153
PspPI GGNCC 1 cut(s) 692
PstI CTGCAG 1 cut(s) 300
PstNI CAGNNNCTG 2 cut(s) 226, 1163
PsuI RGATCY 4 cut(s) 252, 379, 754, 876
PvuII CAGCTG 1 cut(s) 361
RsaI GTAC 3 cut(s) 5, 161, 501
RsaNI GTAC 3 cut(s) 4, 160, 500
SalI GTCGAC 1 cut(s) 969
SaqAI TTAA 5 cut(s) 164, 239, 455, 534, 1178
Sau3AI GATC 9 cut(s) 252, 379, 394, 424, 754, 868, 876, 904, 1251
Sau96I GGNCC 1 cut(s) 692
ScrFI CCNGG 1 cut(s) 257
SduI GDGCHC 2 cut(s) 1043, 1156
SfaNI GCATC 1 cut(s) 739
SfcI CTRYAG 2 cut(s) 296, 444
SinI GGWCC 1 cut(s) 692
SmiI ATTTAAAT 1 cut(s) 1179
SmlI CTYRAG 2 cut(s) 470, 872
SmoI CTYRAG 2 cut(s) 470, 872
SphI GCATGC 1 cut(s) 638
Sse9I AATT 6 cut(s) 70, 165, 302, 541, 772, 863
SsiI CCGC 6 cut(s) 209, 321, 332, 580, 827, 1161
SspMI CTAG 1 cut(s) 948
StyD4I CCNGG 1 cut(s) 255
SwaI ATTTAAAT 1 cut(s) 1179
TaaI ACNGT 2 cut(s) 318, 1263
TaiI ACGT 3 cut(s) 942, 1046, 1126
TaqI TCGA 3 cut(s) 420, 903, 970
TasI AATT 6 cut(s) 70, 165, 302, 541, 772, 863
TatI WGTACW 1 cut(s) 159
TauI GCSGC 2 cut(s) 212, 1163
TfiI GAWTC 1 cut(s) 1055
Tru1I TTAA 5 cut(s) 164, 239, 455, 534, 1178
Tru9I TTAA 5 cut(s) 164, 239, 455, 534, 1178
TscAI CASTG 3 cut(s) 195, 321, 381
TseFI GTSAC 3 cut(s) 916, 940, 1114
TseI GCWGC 9 cut(s) 117, 226, 295, 329, 358, 466, 785, 851, 1139
Tsp45I GTSAC 3 cut(s) 916, 940, 1114
TspDTI ATGAA 6 cut(s) 95, 566, 726, 1047, 1143, 1209
TspGWI ACGGA 1 cut(s) 1073
TspRI CASTG 3 cut(s) 195, 321, 381
VpaK11BI GGWCC 1 cut(s) 692
XceI RCATGY 3 cut(s) 24, 638, 1226
XcmI CCANNNNNNNNNTGG 1 cut(s) 796
XmiI GTMKAC 1 cut(s) 970
XmnI GAANNNNTTC 2 cut(s) 201, 928
XspI CTAG 1 cut(s) 948
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.