pycom11g03690

disease resistance

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr11
Physical Location & Seq
Reverse (-)
2860482 .. 2863139
2658 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom11g03690.1

Sequence Viewer

Length: 2658 bp
ATGCATGACCTTGTTGGTGAGTTGGCGCGGTGGGCTGCAGGTGAAATATGCTTTTCATTGGAGGACAAGGGAAATGGTGACTTGCATCCAATGGCTCGTCACATGTCTTATGTCAGTGGTATCATTGATGGGGTTAAAAAATTTGAGGCCATTTCCAGAGTTAAACATTTGAGGACATTCCTACCGCTTCCACAATCAAGGTATAACTGTCTAACTCGTAGGGTTACATTTGATCTATTGCCAGAACTGCGAATCTTACGGGTGCTTTCTTTGAATGGCTATGCAATAACTGAGCTGCCCAATTCAATTGGTAAATTGTGGAATCTGCGGTATCTGGACCTTTCTTATACACGGATAAAGAGTTTGCCTCCATCAACAACCACTCTTTGCAATCTGCAAACATTGTTATTAGAAGGTTGTTCTACATTGAAGGCATTGCCAGCAAACATGAGTAATCTAATTAGTTTGCGGCATCTCAACAGTTCCATTGGATTGGAAGGAATGCCTCCGCATCTAGGTCGATTGACGAATCTGCAATCCTTGCCGTATTTTGTGGTTGGCAAAGGTAGTGATCAGTCTGGGATAAGAGAGATAGGGTCCCTATTGCATCTCCGAGGGACATTGTGCCTCTCCAGATTGGAGAATGTGGTTGATGCTGAGCATGCTAGTGGGGCCAAGTTAATAGACAAGGAGAGGCTTGATTCATTGAAGCTGGAATGGTCTAATTTGAGCGGATCGAGGGAAATGGGGCTGGAATGCTCTAATTTGAGCGGATCGAAGGAAATGGAGTTGGTGCTTGACATGTTACGACCTCCTAAAAATCTCAAAAAGCTCACCATTTCGCGTTATGGTGGATTGAATTTTTCATCGTGGATTGGAGATCCTCCGTTTTCTAACATGGTGCGTGTAAACTTATATGATTGTGCAAATTGTCATCTCTTGCCACCAGTTGGACAGTTGCCTTGCCTTAAAGAACTTCATATCAGAGGAATGACTGCTGTGGAAACCGTGGGTCCCGAATTCTACGGAAAGGGTAGCTTGCCTTTTCGAGTATTAGAGATTCTCGAGTTTTCTAAGATGGAGCACTGGGAGAAATGGTTGCCTTTCCATCAGGATAAGGGAAGTGGTGTTTTCCCTAGCCTAAAAGTGCTTTCAATCGAAGAGTGCCCTAAACTGGAGGGTGAGTTGCCGAAGAAACTTAATTCGTTATCAAAGCTTGAGATTTGTTGGTGCAAGGAATTGGTGGTGGAAGTTGCCAATTACGAACACGCGAGTGAACTACGCATCGATGGTTGCAAAGCGCTAGTGCATACTAGCGCAGAGGTTGACTTTAACTTATTAGAGACCTTGCGTCTTTCGATTATTTCGGAGCCGCGGTTGCAAGCAAGGGGACTTACGAAGGGAATGGGCAAGATTAAGGAGTTGGAGATTAGTGGTTGTGAGGAGCTGACGTCTTCATTGAAAAATGAGGATAGATGTTTCCCACACCTGATTTCTCTTGTTCGTTTGGTTATTGAAGGCAACTCTGCCCTGGTTGAAGATCTAGGAAAAGAATTGGAGGGGTTGCTGCAGGTATTAGCTTGGAAGCTTGAATATCTGGAAATAAAGAATTGTGGAAGTCTTCCGAAGCTGCCGAAGGGGTTGCACCAATTGTCGTTTCTTCAAGAGCTTCGCATAAGCAAGTGTGACAGTCTAGTTTCTTTTCCAGATGTTGGCCTGCCACCTTCTCTTAAAGTCTTGGAGATTAGATACTGTGACTCTCTGATGTATATTGCAAAATATCAGATTCCCCAAAATCTGAAAAGAATAGTGATACAGGGGTGTGGAAGTTTGAAATCATTAGTGGAGGAGGAGAAGGAGCTCGTTGTTTCTTGTTCATCTTCTTTTTCTGTTTCTCTTGAGCACTTGGAGATATCTTTTTGTCGATCTCTGACATCGTTATCACTGAGAGGCCAGCTTTACAGGGCGCTTAAACACCTTGAGATAGAGGGATGTGAAGGGCTAGAGTTAATAGCATCAGACCGGTTCTTCCACGACAATACTAATAATTGTCTTGAATATATTAACATTGCCATGTGTCGAAATCTGAAATCCTTACCGGAGGGCCTATGCCACCTCACCAATCTTCAAGCTTTTATTGTTTGCGACTGCGAAAAATTGGAGGTGTTACCGGAAGACATTCGCAATCTCACGTCTCTTAAGGAATTGAAGATTGACTGCTTGGAAGGTTTGACTTCCTTTCCTCCCAACCTGACATCACTTGAAATTTCTGAACTCAAGAGTTGTAAGCGGCTCTGGGAGTTGCACAAACTCTCCTCTCTTAGAGAGTTGTCGATCACAAGTGAAGATCCAGATGTGTTGTCATTTCCACCTGATGGGAAGGAGGAGATGTTGCTCCCCAAATCTCTCACTAAACTCACAATTAGTGGCTTCCCAAATCTGAAGAAACTCGGCAAGGGCATTCAATTCCTCACCTCTCTTCAGACTCTGGGACTATATAATTGTCCAAGGCTCGCATCCATTCCAAAGGAGGGCCTGCCTCTTTCACTTGGGCAACTTTGGATCTTTGGGTGTCCTTTACTATCAGAGAGATGTCAACCTGGAAAAGGACGATACTGGCCCAAAATATCCAACATTCCTGACCTAGAAATAGATTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

886

Amino Acids

99.15

Weight (kDa)

6.53

Isoelectric Point (pI)

42.69

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_14 PF23598 80 - 385 8e-23 Leucine-rich repeat region
LRR_R13L1-DRL21 PF25019 195 - 331 3.2e-34 R13L1/DRL21 LRRs
LRR_14 PF23598 653 - 788 1.2e-06 Leucine-rich repeat region
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000070)

Species Orthologous Gene IDs
fragaria_vesca FvH4_7g00360 FvH4_7g00850 FvH4_7g02400 FvH4_7g02430 FvH4_7g02450 FvH4_7g25671 FvH4_7g25680 FvH4_7g25683 FvH4_7g26980 FvH4_7g27330 FvH4_7g27355 FvH4_7g27610 FvH4_7g27642 FvH4_7g27890 FvH4_7g27891 FvH4_7g27891 FvH4_7g27891 FvH4_7g28110 FvH4_7g28390
malus_domestica MD00G1070800.v1.1 MD00G1168000.v1.1 MD00G1168300.v1.1 MD00G1168700.v1.1 MD02G1293100.v1.1 MD02G1293200.v1.1 MD02G1314300.v1.1 MD03G1009000.v1.1 MD03G1009400.v1.1 MD03G1042300.v1.1 MD03G1042400.v1.1 MD07G1033600.v1.1 MD07G1033700.v1.1 MD07G1033900.v1.1 MD11G1011400.v1.1 MD11G1011700.v1.1 MD11G1029800.v1.1 MD11G1029900.v1.1 MD11G1030300.v1.1 MD11G1030400.v1.1 MD11G1030500.v1.1 MD11G1031300.v1.1 MD11G1031600.v1.1 MD11G1032000.v1.1 MD11G1033200.v1.1 MD11G1033600.v1.1 MD11G1033800.v1.1 MD11G1033900.v1.1 MD11G1034100.v1.1 MD11G1034400.v1.1 MD11G1040600.v1.1 MD11G1041100.v1.1 MD11G1043100.v1.1 MD11G1043500.v1.1 MD11G1044500.v1.1 MD11G1045100.v1.1 MD11G1045600.v1.1
prunus_persica Prupe.2G022400_v2.0.a1 Prupe.2G022400_v2.0.a1 Prupe.2G022400_v2.0.a1 Prupe.2G022500_v2.0.a1 Prupe.2G022500_v2.0.a1 Prupe.2G022900_v2.0.a1 Prupe.2G023500_v2.0.a1 Prupe.2G023500_v2.0.a1 Prupe.2G023500_v2.0.a1 Prupe.2G023500_v2.0.a1 Prupe.2G023500_v2.0.a1 Prupe.2G023500_v2.0.a1 Prupe.2G023600_v2.0.a1 Prupe.2G028000_v2.0.a1 Prupe.2G030200_v2.0.a1 Prupe.2G067600_v2.0.a1 Prupe.8G117900_v2.0.a1
pyrus_communis pycom02g26350 pycom03g03270 pycom07g02370 pycom11g00750 pycom11g00790 pycom11g02340 pycom11g02370 pycom11g02380 pycom11g02390 pycom11g02410 pycom11g02460 pycom11g02470 pycom11g02500 pycom11g02510 pycom11g02520 pycom11g02530 pycom11g02580 pycom11g02590 pycom11g02680 pycom11g02710 pycom11g02720 pycom11g02730 pycom11g02750 pycom11g02760 pycom11g02770 pycom11g03690 pycom13g25120 pycom13g25130 pycom13g25140 pycom13g25170 pycom13g25180 pycom13g25190 pycom13g25210
rosa_chinensis RchiOBHm_Chr1g0315001 RchiOBHm_Chr1g0315411 RchiOBHm_Chr1g0317951 RchiOBHm_Chr1g0319741 RchiOBHm_Chr1g0319841 RchiOBHm_Chr1g0319911 RchiOBHm_Chr1g0319991 RchiOBHm_Chr1g0320001 RchiOBHm_Chr1g0320021 RchiOBHm_Chr1g0320081 RchiOBHm_Chr1g0320111 RchiOBHm_Chr1g0320131 RchiOBHm_Chr1g0320161 RchiOBHm_Chr1g0320171 RchiOBHm_Chr1g0320241 RchiOBHm_Chr1g0320281 RchiOBHm_Chr1g0320411 RchiOBHm_Chr1g0320461 RchiOBHm_Chr1g0320551 RchiOBHm_Chr1g0320581 RchiOBHm_Chr1g0320661 RchiOBHm_Chr1g0320891 RchiOBHm_Chr1g0320971 RchiOBHm_Chr1g0321021 RchiOBHm_Chr1g0321031 RchiOBHm_Chr1g0321091 RchiOBHm_Chr1g0321351 RchiOBHm_Chr1g0321481 RchiOBHm_Chr1g0321491 RchiOBHm_Chr1g0327521 RchiOBHm_Chr1g0328061 RchiOBHm_Chr1g0334991 RchiOBHm_Chr1g0373781 RchiOBHm_Chr1g0373891 RchiOBHm_Chr1g0374841 RchiOBHm_Chr2g0131111 RchiOBHm_Chr2g0131121 RchiOBHm_Chr4g0408901 RchiOBHm_Chr5g0041691 RchiOBHm_Chr7g0237021
rosa_laevigata RLG00000019168 RLG00000030456 RLG00000030460 RLG00000030571
rosa_multiflora Rmu_co7963468.1_g000001 Rmu_co7991248.1_g000001 Rmu_co8195256.1_g000001 Rmu_co8312199.1_g000001 Rmu_co8349215.1_g000001 Rmu_co8351041.1_g000001 Rmu_co8422719.1_g000001 Rmu_co8450711.1_g000001 Rmu_co8465555.1_g000001 Rmu_co8489965.1_g000001 Rmu_sc0000087.1_g000014 Rmu_sc0000272.1_g000015 Rmu_sc0000724.1_g000006 Rmu_sc0000724.1_g000021 Rmu_sc0000724.1_g000022 Rmu_sc0000861.1_g000024 Rmu_sc0001049.1_g000006 Rmu_sc0001049.1_g000007 Rmu_sc0001512.1_g000001 Rmu_sc0002022.1_g000004 Rmu_sc0002063.1_g000011 Rmu_sc0002131.1_g000024 Rmu_sc0002337.1_g000012 Rmu_sc0002341.1_g000005 Rmu_sc0002539.1_g000117 Rmu_sc0002745.1_g000005 Rmu_sc0002745.1_g000006 Rmu_sc0003145.1_g000002 Rmu_sc0003199.1_g000007 Rmu_sc0003270.1_g000039 Rmu_sc0003270.1_g000040 Rmu_sc0003423.1_g000001 Rmu_sc0003423.1_g000002 Rmu_sc0003629.1_g000067 Rmu_sc0004039.1_g000002 Rmu_sc0004555.1_g000001 Rmu_sc0004555.1_g000005 Rmu_sc0004555.1_g000006 Rmu_sc0004947.1_g000025 Rmu_sc0004947.1_g000026 Rmu_sc0005255.1_g000025 Rmu_sc0007977.1_g000016 Rmu_sc0008752.1_g000005 Rmu_sc0009236.1_g000004 Rmu_sc0009236.1_g000008 Rmu_sc0009236.1_g000009 Rmu_sc0009236.1_g000010 Rmu_sc0011424.1_g000036 Rmu_sc0013413.1_g000001 Rmu_sc0013735.1_g000002 Rmu_sc0015304.1_g000002 Rmu_sc0015304.1_g000003 Rmu_sc0015585.1_g000001 Rmu_sc0018410.1_g000001 Rmu_sc0022723.1_g000001 Rmu_sc0022723.1_g000002 Rmu_sc0022724.1_g000001 Rmu_sc0023430.1_g000001 Rmu_sc0026053.1_g000001 Rmu_sc0026429.1_g000002 Rmu_sc0026647.1_g000001 Rmu_sc0031359.1_g000001 Rmu_ssc0000042.1_g000040 Rmu_ssc0000081.1_g000001 Rmu_ssc0000300.1_g000011
rosa_roxburghii Rroxscaffold_160G00433620 Rroxscaffold_160G00433990 Rroxscaffold_1G00038820 Rroxscaffold_2G00113190 Rroxscaffold_4G00283240 Rroxscaffold_4G00283930 Rroxscaffold_4G00284010 Rroxscaffold_4G00322600 Rroxscaffold_4G00327710 Rroxscaffold_4G00328100 Rroxscaffold_4G00328130 Rroxscaffold_4G00331590 Rroxscaffold_5G00353280
rosa_rugosa Rorug01G0004200 Rorug01G0018800 Rorug01G0018900 Rorug01G0029900 Rorug01G0030000 Rorug01G0030000 Rorug01G0030000 Rorug01G0030200 Rorug01G0030300 Rorug01G0030800 Rorug01G0032400 Rorug01G0032900 Rorug01G0055800 Rorug01G0067600 Rorug01G0067700 Rorug01G0067800 Rorug01G0067900 Rorug01G0068000 Rorug01G0379500 Rorug01G0379600 Rorug01G0379600 Rorug01G0385200 Rorug01G0385300 Rorug02G0295100 Rorug04G0088500 Rorug04G0088600 Rorug05G0194900 Rorug07G0301400
rosa_samantha Rh1AG014800 Rh1AG015200 Rh1AG030500 Rh1AG041800 Rh1AG042300 Rh1AG042700 Rh1AG042800 Rh1AG042900 Rh1AG045000 Rh1AG085100 Rh1AG085200 Rh1AG388600 Rh1AG396700 Rh1AG396900 Rh1BG007300 Rh1BG039200 Rh1BG039600 Rh1BG042800 Rh1BG067300 Rh1BG109700 Rh1BG109900 Rh1BG354000 Rh1CG043800 Rh1CG044400 Rh1DG008600 Rh1DG022900 Rh1DG023400 Rh1DG023600 Rh1DG023900 Rh1DG024100 Rh1DG024400 Rh1DG024500 Rh1DG025500 Rh1DG025700 Rh1DG026500 Rh1DG026800 Rh1DG038900 Rh1DG048800 Rh1DG049300 Rh1DG051700 Rh1DG052000 Rh1DG146200 Rh1DG383500 Rh2BG354900 Rh2CG333600 Rh4BG149600 Rh4BG149700 Rh4CG160600
rosa_wichuraiana Rw0G001100 Rw0G001130 Rw0G001180 Rw0G012580 Rw1G003480 Rw1G003540 Rw1G003600 Rw1G003640 Rw1G003670 Rw1G003750 Rw1G003940 Rw1G006650 Rw1G034550 Rw1G034560 Rw1G034650 Rw1G034660 Rw1G035170 Rw1G035190 Rw1G037060 Rw2G028210 Rw4G012540 Rw5G026370 Rw7G037900

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 29
AatII GACGTC 1 cut(s) 1454
Acc36I ACCTGC 2 cut(s) 29, 1561
AccB7I CCANNNNNTGG 3 cut(s) 950, 1712, 2375
AccBSI CCGCTC 2 cut(s) 732, 771
AccII CGCG 4 cut(s) 28, 844, 1271, 1375
AclWI GGATC 5 cut(s) 742, 781, 875, 2342, 2570
AcsI RAATTY 4 cut(s) 140, 859, 1019, 2265
AcuI CTGAAG 2 cut(s) 2462, 2465
AcyI GRCGYC 1 cut(s) 1451
AfeI AGCGCT 1 cut(s) 1302
AfiI CCNNNNNNNGG 7 cut(s) 515, 950, 1174, 1712, 2375, 2531, 2606
AflII CTTAAG 1 cut(s) 2198
AflIII ACRYGT 2 cut(s) 102, 801
AgeI ACCGGT 1 cut(s) 2022
AhdI GACNNNNNGTC 1 cut(s) 1350
AjiI CACGTC 1 cut(s) 2193
AjnI CCWGG 2 cut(s) 1530, 2599
AjuI GAANNNNNNNTTGG 2 cut(s) 1641, 1673
AleI CACNNNNGTG 1 cut(s) 1272
Alw21I GWGCWC 3 cut(s) 1086, 1863, 1905
Alw26I GTCTC 2 cut(s) 1337, 2199
AlwI GGATC 5 cut(s) 742, 781, 875, 2342, 2570
AlwNI CAGNNNCTG 1 cut(s) 2488
Ama87I CYCGRG 1 cut(s) 1064
Aor51HI AGCGCT 1 cut(s) 1302
AoxI GGCC 7 cut(s) 147, 672, 1714, 1951, 2104, 2533, 2618
ApeKI GCWGC 4 cut(s) 35, 295, 1567, 1630
ApoI RAATTY 4 cut(s) 140, 859, 1019, 2265
AsiGI ACCGGT 1 cut(s) 2022
Asp700I GAANNNNTTC 1 cut(s) 2178
AspLEI GCGC 4 cut(s) 28, 1303, 1319, 1969
AspS9I GGNCC 7 cut(s) 337, 597, 672, 1013, 2104, 2533, 2619
AsuHPI GGTGA 7 cut(s) 29, 53, 89, 826, 1193, 2110, 2464
AvaI CYCGRG 1 cut(s) 1064
AvaII GGWCC 3 cut(s) 337, 597, 1013
BaeGI GKGCMC 1 cut(s) 1169
BaeI ACNNNNGTAYC 2 cut(s) 1805, 1838
BanII GRGCYC 1 cut(s) 1863
BbsI GAAGAC 3 cut(s) 1446, 1613, 2181
Bbv12I GWGCWC 3 cut(s) 1086, 1863, 1905
BbvI GCAGC 4 cut(s) 22, 282, 1554, 1617
BccI CCATC 6 cut(s) 122, 379, 1072, 1116, 1283, 2369
BceAI ACGGC 1 cut(s) 529
BcgI CGANNNNNNTGC 4 cut(s) 500, 534, 1624, 1658
BciT130I CCWGG 2 cut(s) 1532, 2601
BclI TGATCA 1 cut(s) 571
BcoDI GTCTC 2 cut(s) 1337, 2199
BfaI CTAG 9 cut(s) 515, 666, 1137, 1304, 1314, 1544, 1694, 2003, 2645
BfmI CTRYAG 2 cut(s) 36, 1568
BfoI RGCGCY 2 cut(s) 1304, 1970
BfrI CTTAAG 1 cut(s) 2198
BfuAI ACCTGC 2 cut(s) 29, 1561
BglII AGATCT 1 cut(s) 1540
BisI GCNGC 7 cut(s) 36, 296, 470, 1373, 1568, 1631, 2291
BlpI GCTNAGC 1 cut(s) 657
BlsI GCNGC 7 cut(s) 37, 297, 471, 1374, 1569, 1632, 2292
Bme1390I CCNGG 2 cut(s) 1532, 2601
Bme18I GGWCC 3 cut(s) 337, 597, 1013
BmeRI GACNNNNNGTC 1 cut(s) 1350
BmeT110I CYCGRG 1 cut(s) 1064
BmgBI CACGTC 1 cut(s) 2193
BmgT120I GGNCC 7 cut(s) 337, 597, 672, 1013, 2104, 2533, 2619
BmiI GGNNCC 6 cut(s) 598, 599, 673, 1014, 1015, 1371
BmrFI CCNGG 2 cut(s) 1532, 2601
BmrI ACTGGG 1 cut(s) 1096
BmsI GCATC 8 cut(s) 94, 481, 520, 616, 643, 1293, 2024, 2525
BmuI ACTGGG 1 cut(s) 1096
BpiI GAAGAC 3 cut(s) 1446, 1613, 2181
BplI GAGNNNNNCTC 2 cut(s) 352, 384
BpmI CTGGAG 2 cut(s) 616, 1196
Bpu1102I GCTNAGC 1 cut(s) 657
BpuEI CTTGAG 4 cut(s) 1238, 1919, 2000, 2261
Bsa29I ATCGAT 1 cut(s) 1287
BsaHI GRCGYC 1 cut(s) 1451
BsaI GGTCTC 1 cut(s) 1337
BsaJI CCNNGG 5 cut(s) 613, 1008, 1373, 1530, 2507
BsaWI WCCGGW 3 cut(s) 2022, 2098, 2170
Bsc4I CCNNNNNNNGG 7 cut(s) 515, 950, 1174, 1712, 2375, 2531, 2606
Bse118I RCCGGY 1 cut(s) 2022
Bse1I ACTGG 4 cut(s) 947, 1091, 1179, 2621
Bse3DI GCAATG 2 cut(s) 434, 2067
BseBI CCWGG 2 cut(s) 1532, 2601
BseCI ATCGAT 1 cut(s) 1287
BseDI CCNNGG 5 cut(s) 613, 1008, 1373, 1530, 2507
BseGI GGATG 3 cut(s) 85, 1997, 2516
BseLI CCNNNNNNNGG 7 cut(s) 515, 950, 1174, 1712, 2375, 2531, 2606
BseMI GCAATG 2 cut(s) 434, 2067
BseMII CTCAG 3 cut(s) 282, 648, 1937
BseNI ACTGG 4 cut(s) 947, 1091, 1179, 2621
BseRI GAGGAG 5 cut(s) 1457, 1862, 1865, 2305, 2399
BseSI GKGCMC 1 cut(s) 1169
BseXI GCAGC 4 cut(s) 22, 282, 1554, 1617
Bsh1236I CGCG 4 cut(s) 28, 844, 1271, 1375
BshFI GGCC 7 cut(s) 149, 674, 1716, 1953, 2106, 2535, 2620
BshTI ACCGGT 1 cut(s) 2022
BshVI ATCGAT 1 cut(s) 1287
BsiHKAI GWGCWC 3 cut(s) 1086, 1863, 1905
BsiHKCI CYCGRG 1 cut(s) 1064
BsiSI CCGG 3 cut(s) 2023, 2099, 2171
BslFI GGGAC 5 cut(s) 583, 631, 999, 1404, 2505
BslI CCNNNNNNNGG 7 cut(s) 515, 950, 1174, 1712, 2375, 2531, 2606
BsmAI GTCTC 2 cut(s) 1337, 2199
BsmBI CGTCTC 1 cut(s) 2199
BsmFI GGGAC 5 cut(s) 583, 631, 999, 1404, 2505
BsmI GAATGC 3 cut(s) 507, 761, 2460
BsnI GGCC 7 cut(s) 149, 674, 1716, 1953, 2106, 2535, 2620
Bso31I GGTCTC 1 cut(s) 1337
BsoBI CYCGRG 1 cut(s) 1064
Bsp1286I GDGCHC 4 cut(s) 1086, 1169, 1863, 1905
Bsp1720I GCTNAGC 1 cut(s) 657
BspANI GGCC 7 cut(s) 149, 674, 1716, 1953, 2106, 2535, 2620
BspCNI CTCAG 3 cut(s) 283, 649, 1938
BspDI ATCGAT 1 cut(s) 1287
BspFNI CGCG 4 cut(s) 28, 844, 1271, 1375
BspLI GGNNCC 6 cut(s) 598, 599, 673, 1014, 1015, 1371
BspMAI CTGCAG 2 cut(s) 40, 1572
BspMI ACCTGC 2 cut(s) 29, 1561
BspPI GGATC 5 cut(s) 742, 781, 875, 2342, 2570
BspTI CTTAAG 1 cut(s) 2198
BspTNI GGTCTC 1 cut(s) 1337
BsrBI CCGCTC 2 cut(s) 732, 771
BsrDI GCAATG 2 cut(s) 434, 2067
BsrFI RCCGGY 1 cut(s) 2022
BsrI ACTGG 4 cut(s) 947, 1091, 1179, 2621
BssAI RCCGGY 1 cut(s) 2022
BssECI CCNNGG 5 cut(s) 613, 1008, 1373, 1530, 2507
BssNI GRCGYC 1 cut(s) 1451
BssT1I CCWWGG 1 cut(s) 2507
Bst2UI CCWGG 2 cut(s) 1532, 2601
Bst4CI ACNGT 6 cut(s) 209, 482, 957, 1009, 1691, 1754
Bst6I CTCTTC 2 cut(s) 1155, 2484
BstACI GRCGYC 1 cut(s) 1451
BstAFI CTTAAG 1 cut(s) 2198
BstAPI GCANNNNNTGC 1 cut(s) 541
BstC8I GCNNGC 8 cut(s) 441, 663, 1040, 1383, 1718, 1955, 2514, 2537
BstDEI CTNAG 5 cut(s) 291, 657, 1074, 1946, 2321
BstDSI CCRYGG 2 cut(s) 1008, 1373
BstENI CCTNNNNNAGG 1 cut(s) 2604
BstF5I GGATG 3 cut(s) 85, 1997, 2516
BstFNI CGCG 4 cut(s) 28, 844, 1271, 1375
BstH2I RGCGCY 2 cut(s) 1304, 1970
BstHHI GCGC 4 cut(s) 28, 1303, 1319, 1969
BstMAI GTCTC 2 cut(s) 1337, 2199
BstMWI GCNNNNNNNGC 7 cut(s) 32, 247, 440, 541, 662, 671, 1378
BstNI CCWGG 2 cut(s) 1532, 2601
BstNSI RCATGY 3 cut(s) 106, 665, 805
BstSCI CCNGG 2 cut(s) 1530, 2599
BstSFI CTRYAG 2 cut(s) 36, 1568
BstSLI GKGCMC 1 cut(s) 1169
BstUI CGCG 4 cut(s) 28, 844, 1271, 1375
BstV1I GCAGC 4 cut(s) 22, 282, 1554, 1617
BstV2I GAAGAC 3 cut(s) 1446, 1613, 2181
BstX2I RGATCY 4 cut(s) 880, 1540, 2347, 2562
BstXI CCANNNNNNTGG 1 cut(s) 493
BstYI RGATCY 4 cut(s) 880, 1540, 2347, 2562
Bsu15I ATCGAT 1 cut(s) 1287
BsuRI GGCC 7 cut(s) 149, 674, 1716, 1953, 2106, 2535, 2620
BsuTUI ATCGAT 1 cut(s) 1287
BtgI CCRYGG 2 cut(s) 1008, 1373
BtrI CACGTC 1 cut(s) 2193
BtsCI GGATG 3 cut(s) 85, 1997, 2516
BtsIMutI CAGTG 3 cut(s) 121, 1084, 1943
BveI ACCTGC 2 cut(s) 29, 1561
Cac8I GCNNGC 8 cut(s) 441, 663, 1040, 1383, 1718, 1955, 2514, 2537
CaiI CAGNNNCTG 1 cut(s) 2488
CfoI GCGC 4 cut(s) 28, 1303, 1319, 1969
Cfr10I RCCGGY 1 cut(s) 2022
Cfr13I GGNCC 7 cut(s) 337, 597, 672, 1013, 2104, 2533, 2619
Cfr42I CCGCGG 1 cut(s) 1376
ClaI ATCGAT 1 cut(s) 1287
CseI GACGC 1 cut(s) 1340
CspAI ACCGGT 1 cut(s) 2022
CviAII CATG 7 cut(s) 5, 103, 448, 662, 802, 898, 2074
DdeI CTNAG 5 cut(s) 291, 657, 1074, 1946, 2321
DriI GACNNNNNGTC 1 cut(s) 1350
Eam1104I CTCTTC 2 cut(s) 1155, 2484
Eam1105I GACNNNNNGTC 1 cut(s) 1350
EarI CTCTTC 2 cut(s) 1155, 2484
Ecl136II GAGCTC 1 cut(s) 1861
Eco130I CCWWGG 1 cut(s) 2507
Eco24I GRGCYC 1 cut(s) 1863
Eco31I GGTCTC 1 cut(s) 1337
Eco32I GATATC 1 cut(s) 1914
Eco47I GGWCC 3 cut(s) 337, 597, 1013
Eco47III AGCGCT 1 cut(s) 1302
Eco53kI GAGCTC 1 cut(s) 1861
Eco57I CTGAAG 2 cut(s) 2462, 2465
Eco88I CYCGRG 1 cut(s) 1064
EcoICRI GAGCTC 1 cut(s) 1861
EcoNI CCTNNNNNAGG 1 cut(s) 2604
EcoO109I RGGNCCY 4 cut(s) 597, 1013, 2104, 2533
EcoRI GAATTC 1 cut(s) 1019
EcoRII CCWGG 2 cut(s) 1530, 2599
EcoRV GATATC 1 cut(s) 1914
EcoT14I CCWWGG 1 cut(s) 2507
EcoT22I ATGCAT 1 cut(s) 6
EcoT38I GRGCYC 1 cut(s) 1863
ErhI CCWWGG 1 cut(s) 2507
Esp3I CGTCTC 1 cut(s) 2199
FaeI CATG 7 cut(s) 8, 106, 451, 665, 805, 901, 2077
FalI AAGNNNNNCTT 2 cut(s) 1022, 1054
FaqI GGGAC 5 cut(s) 583, 631, 999, 1404, 2505
FatI CATG 7 cut(s) 4, 102, 447, 661, 801, 897, 2073
FbaI TGATCA 1 cut(s) 571
Fnu4HI GCNGC 7 cut(s) 36, 296, 470, 1373, 1568, 1631, 2291
FokI GGATG 3 cut(s) 72, 2004, 2503
FriOI GRGCYC 1 cut(s) 1863
Fsp4HI GCNGC 7 cut(s) 36, 296, 470, 1373, 1568, 1631, 2291
FspBI CTAG 9 cut(s) 515, 666, 1137, 1304, 1314, 1544, 1694, 2003, 2645
GlaI GCGC 4 cut(s) 27, 1302, 1318, 1968
GluI GCNGC 7 cut(s) 36, 296, 470, 1373, 1568, 1631, 2291
GsuI CTGGAG 2 cut(s) 616, 1196
HaeII RGCGCY 2 cut(s) 1304, 1970
HaeIII GGCC 7 cut(s) 149, 674, 1716, 1953, 2106, 2535, 2620
HapII CCGG 3 cut(s) 2023, 2099, 2171
HgaI GACGC 1 cut(s) 1340
HhaI GCGC 4 cut(s) 28, 1303, 1319, 1969
Hin1I GRCGYC 1 cut(s) 1451
Hin1II CATG 7 cut(s) 8, 106, 451, 665, 805, 901, 2077
Hin6I GCGC 4 cut(s) 26, 1301, 1317, 1967
HinP1I GCGC 4 cut(s) 26, 1301, 1317, 1967
HincII GTYRAC 2 cut(s) 1327, 2597
HindII GTYRAC 2 cut(s) 1327, 2597
HindIII AAGCTT 3 cut(s) 1214, 1586, 2130
HinfI GANTC 8 cut(s) 252, 322, 529, 701, 1060, 1757, 1786, 2485
HpaII CCGG 3 cut(s) 2023, 2099, 2171
HphI GGTGA 7 cut(s) 29, 53, 89, 826, 1193, 2110, 2464
Hpy166II GTNNAC 4 cut(s) 910, 1277, 1327, 2597
Hpy8I GTNNAC 4 cut(s) 910, 1277, 1327, 2597
HpyCH4III ACNGT 6 cut(s) 209, 482, 957, 1009, 1691, 1754
HpyCH4IV ACGT 2 cut(s) 1451, 2192
HpyF10VI GCNNNNNNNGC 7 cut(s) 32, 247, 440, 541, 662, 671, 1378
HpyF3I CTNAG 5 cut(s) 291, 657, 1074, 1946, 2321
HpySE526I ACGT 2 cut(s) 1451, 2192
Hsp92I GRCGYC 1 cut(s) 1451
Hsp92II CATG 7 cut(s) 8, 106, 451, 665, 805, 901, 2077
HspAI GCGC 4 cut(s) 26, 1301, 1317, 1967
KflI GGGWCCC 2 cut(s) 597, 1013
Ksp22I TGATCA 1 cut(s) 571
KspI CCGCGG 1 cut(s) 1376
LmnI GCTCC 5 cut(s) 1081, 1369, 1444, 1858, 2400
Lsp1109I GCAGC 4 cut(s) 22, 282, 1554, 1617
LweI GCATC 8 cut(s) 94, 481, 520, 616, 643, 1293, 2024, 2525
MaeI CTAG 9 cut(s) 515, 666, 1137, 1304, 1314, 1544, 1694, 2003, 2645
MaeII ACGT 2 cut(s) 1451, 2192
MaeIII GTNAC 7 cut(s) 77, 98, 223, 804, 1685, 1754, 2166
MbiI CCGCTC 2 cut(s) 732, 771
MfeI CAATTG 2 cut(s) 306, 1649
MflI RGATCY 4 cut(s) 880, 1540, 2347, 2562
MhlI GDGCHC 4 cut(s) 1086, 1169, 1863, 1905
MlyI GAGTC 2 cut(s) 1751, 2479
MmeI TCCRAC 3 cut(s) 931, 1404, 2655
Mph1103I ATGCAT 1 cut(s) 6
MroXI GAANNNNTTC 1 cut(s) 2178
MslI CAYNNNNRTG 3 cut(s) 666, 1272, 2072
MspA1I CMGCKG 1 cut(s) 1375
MspCI CTTAAG 1 cut(s) 2198
MspI CCGG 3 cut(s) 2023, 2099, 2171
MspR9I CCNGG 2 cut(s) 1532, 2601
MunI CAATTG 2 cut(s) 306, 1649
Mva1269I GAATGC 3 cut(s) 507, 761, 2460
MvaI CCWGG 2 cut(s) 1532, 2601
MvnI CGCG 4 cut(s) 28, 844, 1271, 1375
MwoI GCNNNNNNNGC 7 cut(s) 32, 247, 440, 541, 662, 671, 1378
NlaIII CATG 7 cut(s) 8, 106, 451, 665, 805, 901, 2077
NlaIV GGNNCC 6 cut(s) 598, 599, 673, 1014, 1015, 1371
NmeAIII GCCGAG 1 cut(s) 2430
NmuCI GTSAC 4 cut(s) 77, 98, 1685, 1754
NsiI ATGCAT 1 cut(s) 6
NspI RCATGY 3 cut(s) 106, 665, 805
OliI CACNNNNGTG 1 cut(s) 1272
PaeI GCATGC 1 cut(s) 665
PaeR7I CTCGAG 1 cut(s) 1064
PaqCI CACCTGC 1 cut(s) 29
PciI ACATGT 2 cut(s) 102, 801
PctI GAATGC 3 cut(s) 507, 761, 2460
PdmI GAANNNNTTC 1 cut(s) 2178
PfeI GAWTC 6 cut(s) 252, 322, 529, 701, 1060, 1786
PflMI CCANNNNNTGG 3 cut(s) 950, 1712, 2375
PinAI ACCGGT 1 cut(s) 2022
PkrI GCNGC 7 cut(s) 37, 297, 471, 1374, 1569, 1632, 2292
PleI GAGTC 2 cut(s) 1751, 2479
PpsI GAGTC 2 cut(s) 1751, 2479
PpuMI RGGWCCY 2 cut(s) 597, 1013
PscI ACATGT 2 cut(s) 102, 801
Psp124BI GAGCTC 1 cut(s) 1863
Psp5II RGGWCCY 2 cut(s) 597, 1013
Psp6I CCWGG 2 cut(s) 1530, 2599
PspGI CCWGG 2 cut(s) 1530, 2599
PspN4I GGNNCC 6 cut(s) 598, 599, 673, 1014, 1015, 1371
PspPI GGNCC 7 cut(s) 337, 597, 672, 1013, 2104, 2533, 2619
PspPPI RGGWCCY 2 cut(s) 597, 1013
PstI CTGCAG 2 cut(s) 40, 1572
PstNI CAGNNNCTG 1 cut(s) 2488
PsuI RGATCY 4 cut(s) 880, 1540, 2347, 2562
RseI CAYNNNNRTG 3 cut(s) 666, 1272, 2072
SacI GAGCTC 1 cut(s) 1863
SacII CCGCGG 1 cut(s) 1376
SatI GCNGC 7 cut(s) 36, 296, 470, 1373, 1568, 1631, 2291
Sau96I GGNCC 7 cut(s) 337, 597, 672, 1013, 2104, 2533, 2619
SchI GAGTC 2 cut(s) 1751, 2479
ScrFI CCNGG 2 cut(s) 1532, 2601
SduI GDGCHC 4 cut(s) 1086, 1169, 1863, 1905
SfaNI GCATC 8 cut(s) 94, 481, 520, 616, 643, 1293, 2024, 2525
SfcI CTRYAG 2 cut(s) 36, 1568
Sfr274I CTCGAG 1 cut(s) 1064
Sfr303I CCGCGG 1 cut(s) 1376
SgrBI CCGCGG 1 cut(s) 1376
SinI GGWCC 3 cut(s) 337, 597, 1013
SlaI CTCGAG 1 cut(s) 1064
SmiMI CAYNNNNRTG 3 cut(s) 666, 1272, 2072
SmlI CTYRAG 6 cut(s) 1064, 1217, 1898, 1979, 2198, 2276
SmoI CTYRAG 6 cut(s) 1064, 1217, 1898, 1979, 2198, 2276
SphI GCATGC 1 cut(s) 665
SspMI CTAG 9 cut(s) 515, 666, 1137, 1304, 1314, 1544, 1694, 2003, 2645
SstI GAGCTC 1 cut(s) 1863
StyD4I CCNGG 2 cut(s) 1530, 2599
StyI CCWWGG 1 cut(s) 2507
TaaI ACNGT 6 cut(s) 209, 482, 957, 1009, 1691, 1754
TaiI ACGT 2 cut(s) 1454, 2195
TauI GCSGC 3 cut(s) 472, 1375, 2293
TfiI GAWTC 6 cut(s) 252, 322, 529, 701, 1060, 1786
TscAI CASTG 3 cut(s) 121, 1091, 1950
TseFI GTSAC 4 cut(s) 77, 98, 1685, 1754
TseI GCWGC 4 cut(s) 35, 295, 1567, 1630
Tsp45I GTSAC 4 cut(s) 77, 98, 1685, 1754
TspDTI ATGAA 6 cut(s) 45, 693, 855, 968, 1446, 1866
TspGWI ACGGA 3 cut(s) 367, 876, 1041
TspRI CASTG 3 cut(s) 121, 1091, 1950
Van91I CCANNNNNTGG 3 cut(s) 950, 1712, 2375
Vha464I CTTAAG 1 cut(s) 2198
VpaK11BI GGWCC 3 cut(s) 337, 597, 1013
XagI CCTNNNNNAGG 1 cut(s) 2604
XapI RAATTY 4 cut(s) 140, 859, 1019, 2265
XceI RCATGY 3 cut(s) 106, 665, 805
XhoI CTCGAG 1 cut(s) 1064
XmnI GAANNNNTTC 1 cut(s) 2178
XspI CTAG 9 cut(s) 515, 666, 1137, 1304, 1314, 1544, 1694, 2003, 2645
ZraI GACGTC 1 cut(s) 1452
Zsp2I ATGCAT 1 cut(s) 6
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.