Rmu_sc0001049.1_g000006

disease resistance

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0001049.1
OG0000070
Physical Location & Seq
Forward (+)
17238 .. 18563
1326 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0001049.1_g000006.1.cds

Sequence Viewer

Length: 1326 bp
atgaactctgaaatagacgacattgctaaacgcttgcaagacatatttgaccggaaagtgaaactcggtttgaaatatattgagcatacccctacttcaacatcgtcatcgcacaggacaccaagttcatatgtgttggatggacctgtggttgggagagatgaagacacaagaaagattgtggaattgttgtccagggatgctgatccttcttctccaaaaaattatcaagttgttgccattgttggtataggaggactcggcaagacaacgcttgcgggacaagtcttcaatgatgtagctgcaatggaacagtttgatctcaaggtctgggtttcagtgtctgacgacttcgatcttcaaacggtgacgagagctatttttaaggaagttacatctcggccttgtgatatggatgagttcagtcgacttcaagataatctgagcaagaagatcgatggtaaaaggtttttgattgttttagatgatgtctggagcacgtgtgattatgtttcatggacaaaactgcaagctccctttcgtaggggagctaagggaagtaaggtaatggtgacaacacgtgatgaaaaagttgctgcattgatgggagccccagccgctgaagtttattatttaaagactctatcagatgaaggttgtttgcaagtatttgagcagcatgttagcaatgacaggccaccgaatttcgagttgcttaagaagaaaattgttacgaactgcaatggattgccattggctgcaaaaactcttggtggtgttttacgttgtaaagaaactgacaaatgggaggaaatgctgaatgacaaattatggagtatatcagatgagagtaatatactcccagtactcagattgagttatcattatctcccttcacctttgaagaggtgctttgcctattgctcaatacttcccaatgactatgaatttgggaaaacccaattaatccttctgtggatggcagagggtttccttgagcaaacagaagggactaaaggaatggaagatatcggtgacgaatattttggggagctattatctcggtcattatttcaaacctcgggcaaaaacagttcatgctatgtaatgcatgaccttgttggtgatttggcacgatgggctgctggagacatattttgcaggttggaggataaactgcatggtacatgctctcaaaagactcgtcatctgacttacaattgtggtaaattcgatggggtaaaaagatttgagacattttctgatgcaaaacgctgcggactttcctaccacttcctgtttccggtggttatgagaattatctaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
NB-ARC

Protein Analysis

441

Amino Acids

49.84

Weight (kDa)

6.13

Isoelectric Point (pI)

40.47

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000070)

Species Orthologous Gene IDs
fragaria_vesca FvH4_7g00360 FvH4_7g00850 FvH4_7g02400 FvH4_7g02430 FvH4_7g02450 FvH4_7g25671 FvH4_7g25680 FvH4_7g25683 FvH4_7g26980 FvH4_7g27330 FvH4_7g27355 FvH4_7g27610 FvH4_7g27642 FvH4_7g27890 FvH4_7g27891 FvH4_7g27891 FvH4_7g27891 FvH4_7g28110 FvH4_7g28390
malus_domestica MD00G1070800.v1.1 MD00G1168000.v1.1 MD00G1168300.v1.1 MD00G1168700.v1.1 MD02G1293100.v1.1 MD02G1293200.v1.1 MD02G1314300.v1.1 MD03G1009000.v1.1 MD03G1009400.v1.1 MD03G1042300.v1.1 MD03G1042400.v1.1 MD07G1033600.v1.1 MD07G1033700.v1.1 MD07G1033900.v1.1 MD11G1011400.v1.1 MD11G1011700.v1.1 MD11G1029800.v1.1 MD11G1029900.v1.1 MD11G1030300.v1.1 MD11G1030400.v1.1 MD11G1030500.v1.1 MD11G1031300.v1.1 MD11G1031600.v1.1 MD11G1032000.v1.1 MD11G1033200.v1.1 MD11G1033600.v1.1 MD11G1033800.v1.1 MD11G1033900.v1.1 MD11G1034100.v1.1 MD11G1034400.v1.1 MD11G1040600.v1.1 MD11G1041100.v1.1 MD11G1043100.v1.1 MD11G1043500.v1.1 MD11G1044500.v1.1 MD11G1045100.v1.1 MD11G1045600.v1.1
prunus_persica Prupe.2G022400_v2.0.a1 Prupe.2G022400_v2.0.a1 Prupe.2G022400_v2.0.a1 Prupe.2G022500_v2.0.a1 Prupe.2G022500_v2.0.a1 Prupe.2G022900_v2.0.a1 Prupe.2G023500_v2.0.a1 Prupe.2G023500_v2.0.a1 Prupe.2G023500_v2.0.a1 Prupe.2G023500_v2.0.a1 Prupe.2G023500_v2.0.a1 Prupe.2G023500_v2.0.a1 Prupe.2G023600_v2.0.a1 Prupe.2G028000_v2.0.a1 Prupe.2G030200_v2.0.a1 Prupe.2G067600_v2.0.a1 Prupe.8G117900_v2.0.a1
pyrus_communis pycom02g26350 pycom03g03270 pycom07g02370 pycom11g00750 pycom11g00790 pycom11g02340 pycom11g02370 pycom11g02380 pycom11g02390 pycom11g02410 pycom11g02460 pycom11g02470 pycom11g02500 pycom11g02510 pycom11g02520 pycom11g02530 pycom11g02580 pycom11g02590 pycom11g02680 pycom11g02710 pycom11g02720 pycom11g02730 pycom11g02750 pycom11g02760 pycom11g02770 pycom11g03690 pycom13g25120 pycom13g25130 pycom13g25140 pycom13g25170 pycom13g25180 pycom13g25190 pycom13g25210
rosa_chinensis RchiOBHm_Chr1g0315001 RchiOBHm_Chr1g0315411 RchiOBHm_Chr1g0317951 RchiOBHm_Chr1g0319741 RchiOBHm_Chr1g0319841 RchiOBHm_Chr1g0319911 RchiOBHm_Chr1g0319991 RchiOBHm_Chr1g0320001 RchiOBHm_Chr1g0320021 RchiOBHm_Chr1g0320081 RchiOBHm_Chr1g0320111 RchiOBHm_Chr1g0320131 RchiOBHm_Chr1g0320161 RchiOBHm_Chr1g0320171 RchiOBHm_Chr1g0320241 RchiOBHm_Chr1g0320281 RchiOBHm_Chr1g0320411 RchiOBHm_Chr1g0320461 RchiOBHm_Chr1g0320551 RchiOBHm_Chr1g0320581 RchiOBHm_Chr1g0320661 RchiOBHm_Chr1g0320891 RchiOBHm_Chr1g0320971 RchiOBHm_Chr1g0321021 RchiOBHm_Chr1g0321031 RchiOBHm_Chr1g0321091 RchiOBHm_Chr1g0321351 RchiOBHm_Chr1g0321481 RchiOBHm_Chr1g0321491 RchiOBHm_Chr1g0327521 RchiOBHm_Chr1g0328061 RchiOBHm_Chr1g0334991 RchiOBHm_Chr1g0373781 RchiOBHm_Chr1g0373891 RchiOBHm_Chr1g0374841 RchiOBHm_Chr2g0131111 RchiOBHm_Chr2g0131121 RchiOBHm_Chr4g0408901 RchiOBHm_Chr5g0041691 RchiOBHm_Chr7g0237021
rosa_laevigata RLG00000019168 RLG00000030456 RLG00000030460 RLG00000030571
rosa_multiflora Rmu_co7963468.1_g000001 Rmu_co7991248.1_g000001 Rmu_co8195256.1_g000001 Rmu_co8312199.1_g000001 Rmu_co8349215.1_g000001 Rmu_co8351041.1_g000001 Rmu_co8422719.1_g000001 Rmu_co8450711.1_g000001 Rmu_co8465555.1_g000001 Rmu_co8489965.1_g000001 Rmu_sc0000087.1_g000014 Rmu_sc0000272.1_g000015 Rmu_sc0000724.1_g000006 Rmu_sc0000724.1_g000021 Rmu_sc0000724.1_g000022 Rmu_sc0000861.1_g000024 Rmu_sc0001049.1_g000006 Rmu_sc0001049.1_g000007 Rmu_sc0001512.1_g000001 Rmu_sc0002022.1_g000004 Rmu_sc0002063.1_g000011 Rmu_sc0002131.1_g000024 Rmu_sc0002337.1_g000012 Rmu_sc0002341.1_g000005 Rmu_sc0002539.1_g000117 Rmu_sc0002745.1_g000005 Rmu_sc0002745.1_g000006 Rmu_sc0003145.1_g000002 Rmu_sc0003199.1_g000007 Rmu_sc0003270.1_g000039 Rmu_sc0003270.1_g000040 Rmu_sc0003423.1_g000001 Rmu_sc0003423.1_g000002 Rmu_sc0003629.1_g000067 Rmu_sc0004039.1_g000002 Rmu_sc0004555.1_g000001 Rmu_sc0004555.1_g000005 Rmu_sc0004555.1_g000006 Rmu_sc0004947.1_g000025 Rmu_sc0004947.1_g000026 Rmu_sc0005255.1_g000025 Rmu_sc0007977.1_g000016 Rmu_sc0008752.1_g000005 Rmu_sc0009236.1_g000004 Rmu_sc0009236.1_g000008 Rmu_sc0009236.1_g000009 Rmu_sc0009236.1_g000010 Rmu_sc0011424.1_g000036 Rmu_sc0013413.1_g000001 Rmu_sc0013735.1_g000002 Rmu_sc0015304.1_g000002 Rmu_sc0015304.1_g000003 Rmu_sc0015585.1_g000001 Rmu_sc0018410.1_g000001 Rmu_sc0022723.1_g000001 Rmu_sc0022723.1_g000002 Rmu_sc0022724.1_g000001 Rmu_sc0023430.1_g000001 Rmu_sc0026053.1_g000001 Rmu_sc0026429.1_g000002 Rmu_sc0026647.1_g000001 Rmu_sc0031359.1_g000001 Rmu_ssc0000042.1_g000040 Rmu_ssc0000081.1_g000001 Rmu_ssc0000300.1_g000011
rosa_roxburghii Rroxscaffold_160G00433620 Rroxscaffold_160G00433990 Rroxscaffold_1G00038820 Rroxscaffold_2G00113190 Rroxscaffold_4G00283240 Rroxscaffold_4G00283930 Rroxscaffold_4G00284010 Rroxscaffold_4G00322600 Rroxscaffold_4G00327710 Rroxscaffold_4G00328100 Rroxscaffold_4G00328130 Rroxscaffold_4G00331590 Rroxscaffold_5G00353280
rosa_rugosa Rorug01G0004200 Rorug01G0018800 Rorug01G0018900 Rorug01G0029900 Rorug01G0030000 Rorug01G0030000 Rorug01G0030000 Rorug01G0030200 Rorug01G0030300 Rorug01G0030800 Rorug01G0032400 Rorug01G0032900 Rorug01G0055800 Rorug01G0067600 Rorug01G0067700 Rorug01G0067800 Rorug01G0067900 Rorug01G0068000 Rorug01G0379500 Rorug01G0379600 Rorug01G0379600 Rorug01G0385200 Rorug01G0385300 Rorug02G0295100 Rorug04G0088500 Rorug04G0088600 Rorug05G0194900 Rorug07G0301400
rosa_samantha Rh1AG014800 Rh1AG015200 Rh1AG030500 Rh1AG041800 Rh1AG042300 Rh1AG042700 Rh1AG042800 Rh1AG042900 Rh1AG045000 Rh1AG085100 Rh1AG085200 Rh1AG388600 Rh1AG396700 Rh1AG396900 Rh1BG007300 Rh1BG039200 Rh1BG039600 Rh1BG042800 Rh1BG067300 Rh1BG109700 Rh1BG109900 Rh1BG354000 Rh1CG043800 Rh1CG044400 Rh1DG008600 Rh1DG022900 Rh1DG023400 Rh1DG023600 Rh1DG023900 Rh1DG024100 Rh1DG024400 Rh1DG024500 Rh1DG025500 Rh1DG025700 Rh1DG026500 Rh1DG026800 Rh1DG038900 Rh1DG048800 Rh1DG049300 Rh1DG051700 Rh1DG052000 Rh1DG146200 Rh1DG383500 Rh2BG354900 Rh2CG333600 Rh4BG149600 Rh4BG149700 Rh4CG160600
rosa_wichuraiana Rw0G001100 Rw0G001130 Rw0G001180 Rw0G012580 Rw1G003480 Rw1G003540 Rw1G003600 Rw1G003640 Rw1G003670 Rw1G003750 Rw1G003940 Rw1G006650 Rw1G034550 Rw1G034560 Rw1G034650 Rw1G034660 Rw1G035170 Rw1G035190 Rw1G037060 Rw2G028210 Rw4G012540 Rw5G026370 Rw7G037900

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1152
AccI GTMKAC 1 cut(s) 427
AciI CCGC 3 cut(s) 278, 618, 1278
AclWI GGATC 1 cut(s) 200
AcsI RAATTY 3 cut(s) 703, 947, 1229
AcuI CTGAAG 1 cut(s) 642
AcvI CACGTG 2 cut(s) 501, 581
AfaI GTAC 2 cut(s) 867, 1186
AfiI CCNNNNNNNGG 3 cut(s) 152, 543, 1303
AflII CTTAAG 1 cut(s) 716
AflIII ACRYGT 2 cut(s) 500, 578
AgsI TTSAA 7 cut(s) 73, 99, 292, 362, 434, 904, 1076
AjnI CCWGG 1 cut(s) 194
AjuI GAANNNNNNNTTGG 2 cut(s) 954, 986
AloI GAACNNNNNNTCC 2 cut(s) 109, 141
AluBI AGCT 5 cut(s) 302, 377, 533, 551, 1054
AluI AGCT 5 cut(s) 302, 377, 533, 551, 1054
Alw21I GWGCWC 1 cut(s) 500
Alw26I GTCTC 2 cut(s) 1143, 1247
AlwI GGATC 1 cut(s) 200
AlwNI CAGNNNCTG 2 cut(s) 344, 620
Ama87I CYCGRG 1 cut(s) 1081
AoxI GGCC 2 cut(s) 401, 695
ApeKI GCWGC 6 cut(s) 302, 596, 676, 758, 1142, 1275
ApoI RAATTY 3 cut(s) 703, 947, 1229
ArsI GACNNNNNNTTYG 6 cut(s) 932, 964, 1028, 1060, 1189, 1221
AseI ATTAAT 1 cut(s) 965
AspS9I GGNCC 1 cut(s) 143
AsuHPI GGTGA 5 cut(s) 379, 583, 888, 1046, 1136
AvaI CYCGRG 1 cut(s) 1081
AvaII GGWCC 1 cut(s) 143
BanII GRGCYC 1 cut(s) 613
BbrPI CACGTG 2 cut(s) 501, 581
BbsI GAAGAC 2 cut(s) 171, 280
Bbv12I GWGCWC 1 cut(s) 500
BbvI GCAGC 6 cut(s) 289, 583, 688, 745, 1129, 1262
BccI CCATC 6 cut(s) 134, 452, 598, 973, 1131, 1229
BcgI CGANNNNNNTGC 2 cut(s) 436, 470
BciT130I CCWGG 1 cut(s) 196
BcoDI GTCTC 2 cut(s) 1143, 1247
BfrI CTTAAG 1 cut(s) 716
BfuAI ACCTGC 1 cut(s) 1152
BisI GCNGC 7 cut(s) 303, 597, 618, 677, 759, 1143, 1276
BlsI GCNGC 7 cut(s) 304, 598, 619, 678, 760, 1144, 1277
BmcAI AGTACT 1 cut(s) 867
Bme1390I CCNGG 1 cut(s) 196
Bme18I GGWCC 1 cut(s) 143
BmeT110I CYCGRG 1 cut(s) 1081
BmgT120I GGNCC 1 cut(s) 143
BmiI GGNNCC 1 cut(s) 610
BmrFI CCNGG 1 cut(s) 196
BmrI ACTGGG 1 cut(s) 857
BmsI GCATC 2 cut(s) 190, 1255
BmuI ACTGGG 1 cut(s) 857
BpiI GAAGAC 2 cut(s) 171, 280
BpmI CTGGAG 2 cut(s) 514, 1167
Bpu10I CCTNAGC 1 cut(s) 552
BpuEI CTTGAG 2 cut(s) 308, 1016
Bsa29I ATCGAT 1 cut(s) 456
BsaAI YACGTR 2 cut(s) 501, 581
BsaBI GATNNNNATC 1 cut(s) 204
BsaJI CCNNGG 2 cut(s) 195, 1080
BsaWI WCCGGW 2 cut(s) 51, 1303
BsaXI ACNNNNNCTCC 2 cut(s) 487, 517
Bsc4I CCNNNNNNNGG 3 cut(s) 152, 543, 1303
Bse1I ACTGG 1 cut(s) 863
Bse3DI GCAATG 4 cut(s) 21, 312, 694, 748
Bse8I GATNNNNATC 1 cut(s) 204
BseBI CCWGG 1 cut(s) 196
BseCI ATCGAT 1 cut(s) 456
BseDI CCNNGG 2 cut(s) 195, 1080
BseGI GGATG 4 cut(s) 145, 205, 421, 984
BseJI GATNNNNATC 1 cut(s) 204
BseLI CCNNNNNNNGG 3 cut(s) 152, 543, 1303
BseMI GCAATG 4 cut(s) 21, 312, 694, 748
BseMII CTCAG 2 cut(s) 434, 883
BseNI ACTGG 1 cut(s) 863
BseXI GCAGC 6 cut(s) 289, 583, 688, 745, 1129, 1262
BseYI CCCAGC 1 cut(s) 613
BshFI GGCC 2 cut(s) 403, 697
BshVI ATCGAT 1 cut(s) 456
BsiHKAI GWGCWC 1 cut(s) 500
BsiHKCI CYCGRG 1 cut(s) 1081
BsiSI CCGG 2 cut(s) 52, 1304
BslFI GGGAC 2 cut(s) 294, 1024
BslI CCNNNNNNNGG 3 cut(s) 152, 543, 1303
BsmAI GTCTC 2 cut(s) 1143, 1247
BsmFI GGGAC 2 cut(s) 294, 1024
BsnI GGCC 2 cut(s) 403, 697
BsoBI CYCGRG 1 cut(s) 1081
Bsp1286I GDGCHC 2 cut(s) 500, 613
Bsp143I GATC 4 cut(s) 205, 319, 355, 453
BspACI CCGC 3 cut(s) 278, 618, 1278
BspANI GGCC 2 cut(s) 403, 697
BspCNI CTCAG 2 cut(s) 435, 882
BspDI ATCGAT 1 cut(s) 456
BspLI GGNNCC 1 cut(s) 610
BspMI ACCTGC 1 cut(s) 1152
BspPI GGATC 1 cut(s) 200
BspTI CTTAAG 1 cut(s) 716
BsrDI GCAATG 4 cut(s) 21, 312, 694, 748
BsrI ACTGG 1 cut(s) 863
BssECI CCNNGG 2 cut(s) 195, 1080
BssMI GATC 4 cut(s) 205, 319, 355, 453
Bst2UI CCWGG 1 cut(s) 196
Bst4CI ACNGT 3 cut(s) 315, 367, 1094
Bst6I CTCTTC 1 cut(s) 899
BstAFI CTTAAG 1 cut(s) 716
BstBAI YACGTR 2 cut(s) 501, 581
BstC8I GCNNGC 3 cut(s) 35, 276, 531
BstDEI CTNAG 3 cut(s) 443, 552, 869
BstENI CCTNNNNNAGG 1 cut(s) 541
BstF5I GGATG 4 cut(s) 145, 205, 421, 984
BstKTI GATC 4 cut(s) 208, 322, 358, 456
BstMAI GTCTC 2 cut(s) 1143, 1247
BstMBI GATC 4 cut(s) 205, 319, 355, 453
BstMWI GCNNNNNNNGC 2 cut(s) 617, 1139
BstNI CCWGG 1 cut(s) 196
BstNSI RCATGY 2 cut(s) 683, 1191
BstSCI CCNGG 1 cut(s) 194
BstV1I GCAGC 6 cut(s) 289, 583, 688, 745, 1129, 1262
BstV2I GAAGAC 2 cut(s) 171, 280
Bsu15I ATCGAT 1 cut(s) 456
BsuRI GGCC 2 cut(s) 403, 697
BsuTUI ATCGAT 1 cut(s) 456
BtgZI GCGATG 1 cut(s) 93
BtsCI GGATG 4 cut(s) 145, 205, 421, 984
BtsIMutI CAGTG 1 cut(s) 345
BveI ACCTGC 1 cut(s) 1152
Cac8I GCNNGC 3 cut(s) 35, 276, 531
CaiI CAGNNNCTG 2 cut(s) 344, 620
Cfr13I GGNCC 1 cut(s) 143
ClaI ATCGAT 1 cut(s) 456
Csp6I GTAC 2 cut(s) 866, 1185
CviAII CATG 6 cut(s) 516, 680, 1098, 1112, 1181, 1188
CviQI GTAC 2 cut(s) 866, 1185
DdeI CTNAG 3 cut(s) 443, 552, 869
DpnI GATC 4 cut(s) 207, 321, 357, 455
DpnII GATC 4 cut(s) 205, 319, 355, 453
DraI TTTAAA 1 cut(s) 636
Eam1104I CTCTTC 1 cut(s) 899
EarI CTCTTC 1 cut(s) 899
Eco24I GRGCYC 1 cut(s) 613
Eco32I GATATC 1 cut(s) 1030
Eco47I GGWCC 1 cut(s) 143
Eco57I CTGAAG 1 cut(s) 642
Eco72I CACGTG 2 cut(s) 501, 581
Eco88I CYCGRG 1 cut(s) 1081
EcoNI CCTNNNNNAGG 1 cut(s) 541
EcoRII CCWGG 1 cut(s) 194
EcoRV GATATC 1 cut(s) 1030
EcoT22I ATGCAT 1 cut(s) 1113
EcoT38I GRGCYC 1 cut(s) 613
FaeI CATG 6 cut(s) 519, 683, 1101, 1115, 1184, 1191
FalI AAGNNNNNCTT 2 cut(s) 896, 928
FaqI GGGAC 2 cut(s) 294, 1024
FatI CATG 6 cut(s) 515, 679, 1097, 1111, 1180, 1187
FauI CCCGC 1 cut(s) 271
FauNDI CATATG 1 cut(s) 130
FblI GTMKAC 1 cut(s) 427
Fnu4HI GCNGC 7 cut(s) 303, 597, 618, 677, 759, 1143, 1276
FokI GGATG 4 cut(s) 152, 212, 428, 991
FriOI GRGCYC 1 cut(s) 613
Fsp4HI GCNGC 7 cut(s) 303, 597, 618, 677, 759, 1143, 1276
GluI GCNGC 7 cut(s) 303, 597, 618, 677, 759, 1143, 1276
GsaI CCCAGC 1 cut(s) 617
GsuI CTGGAG 2 cut(s) 514, 1167
HaeIII GGCC 2 cut(s) 403, 697
HapII CCGG 2 cut(s) 52, 1304
Hin1II CATG 6 cut(s) 519, 683, 1101, 1115, 1184, 1191
HincII GTYRAC 1 cut(s) 428
HindII GTYRAC 1 cut(s) 428
HinfI GANTC 3 cut(s) 258, 640, 1201
HpaII CCGG 2 cut(s) 52, 1304
HphI GGTGA 5 cut(s) 379, 583, 888, 1046, 1136
Hpy166II GTNNAC 1 cut(s) 428
Hpy188I TCNGA 8 cut(s) 10, 346, 444, 649, 844, 872, 1212, 1264
Hpy188III TCNNGA 2 cut(s) 434, 493
Hpy8I GTNNAC 1 cut(s) 428
HpyAV CCTTC 5 cut(s) 219, 647, 903, 980, 1001
HpyCH4III ACNGT 3 cut(s) 315, 367, 1094
HpyCH4IV ACGT 3 cut(s) 500, 580, 784
HpyF10VI GCNNNNNNNGC 2 cut(s) 617, 1139
HpyF3I CTNAG 3 cut(s) 443, 552, 869
HpySE526I ACGT 3 cut(s) 500, 580, 784
Hsp92II CATG 6 cut(s) 519, 683, 1101, 1115, 1184, 1191
Kzo9I GATC 4 cut(s) 205, 319, 355, 453
LmnI GCTCC 5 cut(s) 495, 538, 548, 608, 1051
Lsp1109I GCAGC 6 cut(s) 289, 583, 688, 745, 1129, 1262
LweI GCATC 2 cut(s) 190, 1255
MaeII ACGT 3 cut(s) 500, 580, 784
MaeIII GTNAC 5 cut(s) 367, 391, 571, 730, 1034
MalI GATC 4 cut(s) 207, 321, 357, 455
MboI GATC 4 cut(s) 205, 319, 355, 453
MboII GAAGA 8 cut(s) 176, 204, 280, 350, 463, 733, 916, 1037
MfeI CAATTG 1 cut(s) 1219
MhlI GDGCHC 2 cut(s) 500, 613
MlyI GAGTC 3 cut(s) 252, 634, 1195
MmeI TCCRAC 2 cut(s) 117, 1146
MnlI CCTC 6 cut(s) 248, 802, 900, 979, 1090, 1162
Mph1103I ATGCAT 1 cut(s) 1113
MseI TTAA 4 cut(s) 384, 635, 717, 965
MspA1I CMGCKG 1 cut(s) 620
MspCI CTTAAG 1 cut(s) 716
MspI CCGG 2 cut(s) 52, 1304
MspR9I CCNGG 1 cut(s) 196
MunI CAATTG 1 cut(s) 1219
MvaI CCWGG 1 cut(s) 196
MwoI GCNNNNNNNGC 2 cut(s) 617, 1139
NdeI CATATG 1 cut(s) 130
NdeII GATC 4 cut(s) 205, 319, 355, 453
NlaIII CATG 6 cut(s) 519, 683, 1101, 1115, 1184, 1191
NlaIV GGNNCC 1 cut(s) 610
NmeAIII GCCGAG 2 cut(s) 240, 379
NmuCI GTSAC 3 cut(s) 367, 571, 1034
NsiI ATGCAT 1 cut(s) 1113
NspI RCATGY 2 cut(s) 683, 1191
PkrI GCNGC 7 cut(s) 304, 598, 619, 678, 760, 1144, 1277
PleI GAGTC 3 cut(s) 252, 634, 1195
PmaCI CACGTG 2 cut(s) 501, 581
PmlI CACGTG 2 cut(s) 501, 581
PpsI GAGTC 3 cut(s) 252, 634, 1195
Ppu21I YACGTR 2 cut(s) 501, 581
PshBI ATTAAT 1 cut(s) 965
Psp6I CCWGG 1 cut(s) 194
PspCI CACGTG 2 cut(s) 501, 581
PspFI CCCAGC 1 cut(s) 613
PspGI CCWGG 1 cut(s) 194
PspN4I GGNNCC 1 cut(s) 610
PspPI GGNCC 1 cut(s) 143
PstNI CAGNNNCTG 2 cut(s) 344, 620
RsaI GTAC 2 cut(s) 867, 1186
RsaNI GTAC 2 cut(s) 866, 1185
SalI GTCGAC 1 cut(s) 426
SaqAI TTAA 4 cut(s) 384, 635, 717, 965
SatI GCNGC 7 cut(s) 303, 597, 618, 677, 759, 1143, 1276
Sau3AI GATC 4 cut(s) 205, 319, 355, 453
Sau96I GGNCC 1 cut(s) 143
ScaI AGTACT 1 cut(s) 867
SchI GAGTC 3 cut(s) 252, 634, 1195
ScrFI CCNGG 1 cut(s) 196
SduI GDGCHC 2 cut(s) 500, 613
SfaNI GCATC 2 cut(s) 190, 1255
SinI GGWCC 1 cut(s) 143
SmlI CTYRAG 3 cut(s) 323, 716, 995
SmoI CTYRAG 3 cut(s) 323, 716, 995
SsiI CCGC 3 cut(s) 278, 618, 1278
SspI AATATT 1 cut(s) 1043
StyD4I CCNGG 1 cut(s) 194
TaaI ACNGT 3 cut(s) 315, 367, 1094
TaiI ACGT 3 cut(s) 503, 583, 787
TaqI TCGA 5 cut(s) 354, 427, 456, 708, 1233
TaqII GACCGA 1 cut(s) 1053
TatI WGTACW 1 cut(s) 865
TauI GCSGC 1 cut(s) 620
Tru1I TTAA 4 cut(s) 384, 635, 717, 965
Tru9I TTAA 4 cut(s) 384, 635, 717, 965
TscAI CASTG 1 cut(s) 345
TseFI GTSAC 3 cut(s) 367, 571, 1034
TseI GCWGC 6 cut(s) 302, 596, 676, 758, 1142, 1275
Tsp45I GTSAC 3 cut(s) 367, 571, 1034
TspDTI ATGAA 8 cut(s) 17, 117, 177, 504, 600, 666, 960, 1086
TspRI CASTG 1 cut(s) 345
Vha464I CTTAAG 1 cut(s) 716
VpaK11BI GGWCC 1 cut(s) 143
VspI ATTAAT 1 cut(s) 965
XagI CCTNNNNNAGG 1 cut(s) 541
XapI RAATTY 3 cut(s) 703, 947, 1229
XceI RCATGY 2 cut(s) 683, 1191
XmiI GTMKAC 1 cut(s) 427
ZrmI AGTACT 1 cut(s) 867
Zsp2I ATGCAT 1 cut(s) 1113
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.