Rw1G034650

disease resistance

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr1
Physical Location & Seq
Forward (+)
62535986 .. 62537827
1842 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw1G034650.1

Sequence Viewer

Length: 1842 bp
ATGGTGCGTGTAAGGTTAGAACAATGTCATCATTGTCAATTCTTGCCACCATTCGGACAATTGCCTTATCTCAAAGAACTTTATATACAAGAAATGGATGCAGTGGAAAGCATTGGTCTTGAGTTTTATGGAGAAGGTAACTTGCCGTTTCAAGCTTTAGAGACCCTTAAGTTTCAGAATCTGAAATATTGGAAGAAGTGGTCTCCTTGCCAACAAAATGAGGGGGTTGGGGTTTTCTCTTGCCTGAAAATGCTTTCCATCAAGGGCTGCCCCAAATTGGAGGGTAGTTTACCGAAGAAGCTTGATTCATTAGCACAGCTGGAGATATGTGGATGTGAGGAACTGGTGATTTCAATATCCAATTATAAACAGCTTGATGAATCAAACATAAAAAATTGCAAGATGGTGGTTTGCGACACAAGTCCAGCTCTCTTAGAGAGATTGACATTTTCAAATATTTCAGAGTTGAGATTCCAAACAGAGGCGTTCATGAAAAGCTTGAAAAATGTTAAAGAGTTGAATATTACTGGTTGTGAGGAGCTGACATGTTCCTTTCAGCATGAGGATAGATTACTGCAACACTTGATTTCTCTTGGTAGTTTGTATATTGAAGACAACTCTGCACTTGTTGAAAAGCTAGGGAAAGAAGCAGAGCAGTTGGTGCAATTGCAAATACTGGATTGCAAGCTTAAACGTCTAGAATTGAGCAAGTGTGGAACCTTTTTGAAGGTGCCAGAAGGATTGCATCACCTTACATCTCTTCAAGAGCTTCACATAAGGGGATGTTCAAGTCTTGTTTCTTTTCCGGATGCTGGTCTGCCACCTTGTCTTAAAGTTATAGAAATTCAGAACTGCGATTCTCTTTTGCACTTTGCAAAATACCAGATTGCTCCAAGCCTGAGAAGAATAGGGATTCGGGAATGTGAGAAATTAAAATCATTGATAGAGAAAAAGGAGGTGGTGGTGGACAGCTCTTGTTCGTCTTATTGTCTCGAGTATTTGCAGATAAGGAACTGTCCATCTCTGTTATCCTTATTATGCAAACCCCAATTATCCAGGGCCCTTAAACAGCTTCGCATTTGGGATTGTGAACAGCTGGAGTTAATAACCGAGAGGTTCCTCGATGACACCTGTCAACTCGAAGAAATTCATATCACAACATGCCCAAACCTTAAATCCTTACCTGAGGGACTGTGCTACCTCACCAATCTTCAGTCATTATATATTTGGGGTTGTCAAAGTCTGGTTTCATTGCCGAGATTGAGTGTGTGGCCAAGAGTGATGAATATCGAAGCTTGCGAGAAATTGGAGGTGGCACACTTGCTGAGAGACATGATGCACTCTAATAATCTTGAGGTTTTGACGATTGATTACTGTGAAGGTTTGACTACTCCTTCCTTTCCCCCCAACCTAACATCACTTGAAATTTACAAGATCAAGAATTGTAAGGCGCTGATGGAATCTCAAGGGTTGCACATACTCACATCTTTGAGAGAATTGACACTATGGGGTAAAGATGATCCAGGTCTGGTGTGCTTTCCACCTGGTGAGAATTCGAAGGAGAAGGAGATGCTGCTCCCCGGATCTCTTGTTACATTGATAATTCAAGGCTTCCCAAATCTAAAGAAACTGAGCAAGGACTTTCAATTCCTCACCTCTCTTGAAACTCTTGAAATCTGCAACTGTCCGAAGCTTACAACCCTTCCAGAGAAGGGCCTGCCTCTTTCACTTGCGCAACTTGAGATTATTGAGTGTCCTCTACTTGAAGAGAGATGCAAAGGACGATACAGGCCCAAGATAGCACACATCCCTTGTGTACGAATTAAGAGCTCCTCGATCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

613

Amino Acids

69.64

Weight (kDa)

6.09

Isoelectric Point (pI)

50.35

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000070)

Species Orthologous Gene IDs
fragaria_vesca FvH4_7g00360 FvH4_7g00850 FvH4_7g02400 FvH4_7g02430 FvH4_7g02450 FvH4_7g25671 FvH4_7g25680 FvH4_7g25683 FvH4_7g26980 FvH4_7g27330 FvH4_7g27355 FvH4_7g27610 FvH4_7g27642 FvH4_7g27890 FvH4_7g27891 FvH4_7g27891 FvH4_7g27891 FvH4_7g28110 FvH4_7g28390
malus_domestica MD00G1070800.v1.1 MD00G1168000.v1.1 MD00G1168300.v1.1 MD00G1168700.v1.1 MD02G1293100.v1.1 MD02G1293200.v1.1 MD02G1314300.v1.1 MD03G1009000.v1.1 MD03G1009400.v1.1 MD03G1042300.v1.1 MD03G1042400.v1.1 MD07G1033600.v1.1 MD07G1033700.v1.1 MD07G1033900.v1.1 MD11G1011400.v1.1 MD11G1011700.v1.1 MD11G1029800.v1.1 MD11G1029900.v1.1 MD11G1030300.v1.1 MD11G1030400.v1.1 MD11G1030500.v1.1 MD11G1031300.v1.1 MD11G1031600.v1.1 MD11G1032000.v1.1 MD11G1033200.v1.1 MD11G1033600.v1.1 MD11G1033800.v1.1 MD11G1033900.v1.1 MD11G1034100.v1.1 MD11G1034400.v1.1 MD11G1040600.v1.1 MD11G1041100.v1.1 MD11G1043100.v1.1 MD11G1043500.v1.1 MD11G1044500.v1.1 MD11G1045100.v1.1 MD11G1045600.v1.1
prunus_persica Prupe.2G022400_v2.0.a1 Prupe.2G022400_v2.0.a1 Prupe.2G022400_v2.0.a1 Prupe.2G022500_v2.0.a1 Prupe.2G022500_v2.0.a1 Prupe.2G022900_v2.0.a1 Prupe.2G023500_v2.0.a1 Prupe.2G023500_v2.0.a1 Prupe.2G023500_v2.0.a1 Prupe.2G023500_v2.0.a1 Prupe.2G023500_v2.0.a1 Prupe.2G023500_v2.0.a1 Prupe.2G023600_v2.0.a1 Prupe.2G028000_v2.0.a1 Prupe.2G030200_v2.0.a1 Prupe.2G067600_v2.0.a1 Prupe.8G117900_v2.0.a1
pyrus_communis pycom02g26350 pycom03g03270 pycom07g02370 pycom11g00750 pycom11g00790 pycom11g02340 pycom11g02370 pycom11g02380 pycom11g02390 pycom11g02410 pycom11g02460 pycom11g02470 pycom11g02500 pycom11g02510 pycom11g02520 pycom11g02530 pycom11g02580 pycom11g02590 pycom11g02680 pycom11g02710 pycom11g02720 pycom11g02730 pycom11g02750 pycom11g02760 pycom11g02770 pycom11g03690 pycom13g25120 pycom13g25130 pycom13g25140 pycom13g25170 pycom13g25180 pycom13g25190 pycom13g25210
rosa_chinensis RchiOBHm_Chr1g0315001 RchiOBHm_Chr1g0315411 RchiOBHm_Chr1g0317951 RchiOBHm_Chr1g0319741 RchiOBHm_Chr1g0319841 RchiOBHm_Chr1g0319911 RchiOBHm_Chr1g0319991 RchiOBHm_Chr1g0320001 RchiOBHm_Chr1g0320021 RchiOBHm_Chr1g0320081 RchiOBHm_Chr1g0320111 RchiOBHm_Chr1g0320131 RchiOBHm_Chr1g0320161 RchiOBHm_Chr1g0320171 RchiOBHm_Chr1g0320241 RchiOBHm_Chr1g0320281 RchiOBHm_Chr1g0320411 RchiOBHm_Chr1g0320461 RchiOBHm_Chr1g0320551 RchiOBHm_Chr1g0320581 RchiOBHm_Chr1g0320661 RchiOBHm_Chr1g0320891 RchiOBHm_Chr1g0320971 RchiOBHm_Chr1g0321021 RchiOBHm_Chr1g0321031 RchiOBHm_Chr1g0321091 RchiOBHm_Chr1g0321351 RchiOBHm_Chr1g0321481 RchiOBHm_Chr1g0321491 RchiOBHm_Chr1g0327521 RchiOBHm_Chr1g0328061 RchiOBHm_Chr1g0334991 RchiOBHm_Chr1g0373781 RchiOBHm_Chr1g0373891 RchiOBHm_Chr1g0374841 RchiOBHm_Chr2g0131111 RchiOBHm_Chr2g0131121 RchiOBHm_Chr4g0408901 RchiOBHm_Chr5g0041691 RchiOBHm_Chr7g0237021
rosa_laevigata RLG00000019168 RLG00000030456 RLG00000030460 RLG00000030571
rosa_multiflora Rmu_co7963468.1_g000001 Rmu_co7991248.1_g000001 Rmu_co8195256.1_g000001 Rmu_co8312199.1_g000001 Rmu_co8349215.1_g000001 Rmu_co8351041.1_g000001 Rmu_co8422719.1_g000001 Rmu_co8450711.1_g000001 Rmu_co8465555.1_g000001 Rmu_co8489965.1_g000001 Rmu_sc0000087.1_g000014 Rmu_sc0000272.1_g000015 Rmu_sc0000724.1_g000006 Rmu_sc0000724.1_g000021 Rmu_sc0000724.1_g000022 Rmu_sc0000861.1_g000024 Rmu_sc0001049.1_g000006 Rmu_sc0001049.1_g000007 Rmu_sc0001512.1_g000001 Rmu_sc0002022.1_g000004 Rmu_sc0002063.1_g000011 Rmu_sc0002131.1_g000024 Rmu_sc0002337.1_g000012 Rmu_sc0002341.1_g000005 Rmu_sc0002539.1_g000117 Rmu_sc0002745.1_g000005 Rmu_sc0002745.1_g000006 Rmu_sc0003145.1_g000002 Rmu_sc0003199.1_g000007 Rmu_sc0003270.1_g000039 Rmu_sc0003270.1_g000040 Rmu_sc0003423.1_g000001 Rmu_sc0003423.1_g000002 Rmu_sc0003629.1_g000067 Rmu_sc0004039.1_g000002 Rmu_sc0004555.1_g000001 Rmu_sc0004555.1_g000005 Rmu_sc0004555.1_g000006 Rmu_sc0004947.1_g000025 Rmu_sc0004947.1_g000026 Rmu_sc0005255.1_g000025 Rmu_sc0007977.1_g000016 Rmu_sc0008752.1_g000005 Rmu_sc0009236.1_g000004 Rmu_sc0009236.1_g000008 Rmu_sc0009236.1_g000009 Rmu_sc0009236.1_g000010 Rmu_sc0011424.1_g000036 Rmu_sc0013413.1_g000001 Rmu_sc0013735.1_g000002 Rmu_sc0015304.1_g000002 Rmu_sc0015304.1_g000003 Rmu_sc0015585.1_g000001 Rmu_sc0018410.1_g000001 Rmu_sc0022723.1_g000001 Rmu_sc0022723.1_g000002 Rmu_sc0022724.1_g000001 Rmu_sc0023430.1_g000001 Rmu_sc0026053.1_g000001 Rmu_sc0026429.1_g000002 Rmu_sc0026647.1_g000001 Rmu_sc0031359.1_g000001 Rmu_ssc0000042.1_g000040 Rmu_ssc0000081.1_g000001 Rmu_ssc0000300.1_g000011
rosa_roxburghii Rroxscaffold_160G00433620 Rroxscaffold_160G00433990 Rroxscaffold_1G00038820 Rroxscaffold_2G00113190 Rroxscaffold_4G00283240 Rroxscaffold_4G00283930 Rroxscaffold_4G00284010 Rroxscaffold_4G00322600 Rroxscaffold_4G00327710 Rroxscaffold_4G00328100 Rroxscaffold_4G00328130 Rroxscaffold_4G00331590 Rroxscaffold_5G00353280
rosa_rugosa Rorug01G0004200 Rorug01G0018800 Rorug01G0018900 Rorug01G0029900 Rorug01G0030000 Rorug01G0030000 Rorug01G0030000 Rorug01G0030200 Rorug01G0030300 Rorug01G0030800 Rorug01G0032400 Rorug01G0032900 Rorug01G0055800 Rorug01G0067600 Rorug01G0067700 Rorug01G0067800 Rorug01G0067900 Rorug01G0068000 Rorug01G0379500 Rorug01G0379600 Rorug01G0379600 Rorug01G0385200 Rorug01G0385300 Rorug02G0295100 Rorug04G0088500 Rorug04G0088600 Rorug05G0194900 Rorug07G0301400
rosa_samantha Rh1AG014800 Rh1AG015200 Rh1AG030500 Rh1AG041800 Rh1AG042300 Rh1AG042700 Rh1AG042800 Rh1AG042900 Rh1AG045000 Rh1AG085100 Rh1AG085200 Rh1AG388600 Rh1AG396700 Rh1AG396900 Rh1BG007300 Rh1BG039200 Rh1BG039600 Rh1BG042800 Rh1BG067300 Rh1BG109700 Rh1BG109900 Rh1BG354000 Rh1CG043800 Rh1CG044400 Rh1DG008600 Rh1DG022900 Rh1DG023400 Rh1DG023600 Rh1DG023900 Rh1DG024100 Rh1DG024400 Rh1DG024500 Rh1DG025500 Rh1DG025700 Rh1DG026500 Rh1DG026800 Rh1DG038900 Rh1DG048800 Rh1DG049300 Rh1DG051700 Rh1DG052000 Rh1DG146200 Rh1DG383500 Rh2BG354900 Rh2CG333600 Rh4BG149600 Rh4BG149700 Rh4CG160600
rosa_wichuraiana Rw0G001100 Rw0G001130 Rw0G001180 Rw0G012580 Rw1G003480 Rw1G003540 Rw1G003600 Rw1G003640 Rw1G003670 Rw1G003750 Rw1G003940 Rw1G006650 Rw1G034550 Rw1G034560 Rw1G034650 Rw1G034660 Rw1G035170 Rw1G035190 Rw1G037060 Rw2G028210 Rw4G012540 Rw5G026370 Rw7G037900

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 366
Acc16I TGCGCA 1 cut(s) 1734
AccB1I GGYRCC 1 cut(s) 730
AccIII TCCGGA 1 cut(s) 805
AclWI GGATC 2 cut(s) 1514, 1591
AcoI YGGCCR 1 cut(s) 1271
AcsI RAATTY 4 cut(s) 843, 1146, 1425, 1552
AcuI CTGAAG 1 cut(s) 1196
AdeI CACNNNGTG 1 cut(s) 1547
AfaI GTAC 1 cut(s) 1818
AfiI CCNNNNNNNGG 5 cut(s) 53, 277, 481, 812, 1712
AflII CTTAAG 1 cut(s) 167
AflIII ACRYGT 1 cut(s) 545
AjnI CCWGG 3 cut(s) 1055, 1522, 1543
Alw21I GWGCWC 1 cut(s) 1832
Alw26I GTCTC 4 cut(s) 155, 207, 995, 1323
AlwI GGATC 2 cut(s) 1514, 1591
AlwNI CAGNNNCTG 1 cut(s) 181
Ama87I CYCGRG 1 cut(s) 992
Aor13HI TCCGGA 1 cut(s) 805
AoxI GGCC 4 cut(s) 1059, 1271, 1714, 1790
ApaI GGGCCC 1 cut(s) 1063
ApeKI GCWGC 2 cut(s) 267, 1573
ApoI RAATTY 4 cut(s) 843, 1146, 1425, 1552
Asp700I GAANNNNTTC 1 cut(s) 1146
AspLEI GCGC 2 cut(s) 1453, 1735
AspS9I GGNCC 4 cut(s) 1059, 1060, 1714, 1791
AsuC2I CCSGG 1 cut(s) 1581
AsuHPI GGTGA 5 cut(s) 358, 740, 1195, 1559, 1645
AsuII TTCGAA 1 cut(s) 1556
AvaI CYCGRG 1 cut(s) 992
AxyI CCTNAGG 1 cut(s) 1185
BaeGI GKGCMC 1 cut(s) 1063
BalI TGGCCA 1 cut(s) 1273
BanI GGYRCC 1 cut(s) 730
BanII GRGCYC 2 cut(s) 1063, 1832
BbsI GAAGAC 1 cut(s) 618
Bbv12I GWGCWC 1 cut(s) 1832
BbvI GCAGC 2 cut(s) 254, 1560
BccI CCATC 4 cut(s) 266, 397, 1027, 1450
BceAI ACGGC 1 cut(s) 130
BciT130I CCWGG 3 cut(s) 1057, 1524, 1545
BcnI CCSGG 1 cut(s) 1581
BcoDI GTCTC 4 cut(s) 155, 207, 995, 1323
BfaI CTAG 3 cut(s) 638, 698, 1840
BfoI RGCGCY 1 cut(s) 1454
BfrI CTTAAG 1 cut(s) 167
BisI GCNGC 2 cut(s) 268, 1574
BlsI GCNGC 2 cut(s) 269, 1575
Bme1390I CCNGG 4 cut(s) 1057, 1524, 1545, 1581
BmeT110I CYCGRG 1 cut(s) 992
BmgT120I GGNCC 4 cut(s) 1059, 1060, 1714, 1791
BmiI GGNNCC 4 cut(s) 718, 732, 1061, 1118
BmrFI CCNGG 4 cut(s) 1057, 1524, 1545, 1581
BmsI GCATC 6 cut(s) 88, 754, 799, 1326, 1560, 1763
BoxI GACNNNNGTC 2 cut(s) 420, 1131
BpiI GAAGAC 1 cut(s) 618
BpmI CTGGAG 2 cut(s) 341, 1118
Bpu14I TTCGAA 1 cut(s) 1556
BpuEI CTTGAG 4 cut(s) 140, 1373, 1449, 1760
BpuMI CCSGG 1 cut(s) 1581
BsaBI GATNNNNATC 1 cut(s) 1286
BsaI GGTCTC 2 cut(s) 155, 207
BsaJI CCNNGG 2 cut(s) 1056, 1579
BsaWI WCCGGW 1 cut(s) 805
Bsc4I CCNNNNNNNGG 5 cut(s) 53, 277, 481, 812, 1712
Bse1I ACTGG 3 cut(s) 348, 532, 681
Bse21I CCTNAGG 1 cut(s) 1185
Bse3DI GCAATG 1 cut(s) 1250
Bse8I GATNNNNATC 1 cut(s) 1286
BseAI TCCGGA 1 cut(s) 805
BseBI CCWGG 3 cut(s) 1057, 1524, 1545
BseDI CCNNGG 2 cut(s) 1056, 1579
BseGI GGATG 5 cut(s) 103, 338, 788, 814, 1806
BseJI GATNNNNATC 1 cut(s) 1286
BseLI CCNNNNNNNGG 5 cut(s) 53, 277, 481, 812, 1712
BseMI GCAATG 1 cut(s) 1250
BseMII CTCAG 4 cut(s) 890, 1176, 1316, 1622
BseNI ACTGG 3 cut(s) 348, 532, 681
BseRI GAGGAG 2 cut(s) 551, 1822
BseSI GKGCMC 1 cut(s) 1063
BseXI GCAGC 2 cut(s) 254, 1560
BsgI GTGCAG 1 cut(s) 606
BshFI GGCC 4 cut(s) 1061, 1273, 1716, 1792
BshNI GGYRCC 1 cut(s) 730
BsiHKAI GWGCWC 1 cut(s) 1832
BsiHKCI CYCGRG 1 cut(s) 992
BsiSI CCGG 2 cut(s) 806, 1581
BslFI GGGAC 1 cut(s) 1203
BslI CCNNNNNNNGG 5 cut(s) 53, 277, 481, 812, 1712
BsmAI GTCTC 4 cut(s) 155, 207, 995, 1323
BsmFI GGGAC 1 cut(s) 1203
BsnI GGCC 4 cut(s) 1061, 1273, 1716, 1792
Bso31I GGTCTC 2 cut(s) 155, 207
BsoBI CYCGRG 1 cut(s) 992
Bsp119I TTCGAA 1 cut(s) 1556
Bsp120I GGGCCC 1 cut(s) 1059
Bsp1286I GDGCHC 2 cut(s) 1063, 1832
Bsp13I TCCGGA 1 cut(s) 805
Bsp143I GATC 4 cut(s) 1434, 1519, 1583, 1836
BspANI GGCC 4 cut(s) 1061, 1273, 1716, 1792
BspCNI CTCAG 4 cut(s) 891, 1177, 1317, 1623
BspEI TCCGGA 1 cut(s) 805
BspHI TCATGA 1 cut(s) 489
BspLI GGNNCC 4 cut(s) 718, 732, 1061, 1118
BspPI GGATC 2 cut(s) 1514, 1591
BspT104I TTCGAA 1 cut(s) 1556
BspT107I GGYRCC 1 cut(s) 730
BspTI CTTAAG 1 cut(s) 167
BspTNI GGTCTC 2 cut(s) 155, 207
BsrDI GCAATG 1 cut(s) 1250
BsrI ACTGG 3 cut(s) 348, 532, 681
BssECI CCNNGG 2 cut(s) 1056, 1579
BssMI GATC 4 cut(s) 1434, 1519, 1583, 1836
Bst2UI CCWGG 3 cut(s) 1057, 1524, 1545
Bst4CI ACNGT 4 cut(s) 1016, 1194, 1376, 1685
Bst6I CTCTTC 2 cut(s) 765, 1761
BstAFI CTTAAG 1 cut(s) 167
BstAPI GCANNNNNTGC 1 cut(s) 661
BstBI TTCGAA 1 cut(s) 1556
BstC8I GCNNGC 3 cut(s) 686, 1297, 1718
BstDEI CTNAG 5 cut(s) 433, 899, 1185, 1325, 1631
BstF5I GGATG 5 cut(s) 103, 338, 788, 814, 1806
BstH2I RGCGCY 1 cut(s) 1454
BstHHI GCGC 2 cut(s) 1453, 1735
BstKTI GATC 4 cut(s) 1437, 1522, 1586, 1839
BstMAI GTCTC 4 cut(s) 155, 207, 995, 1323
BstMBI GATC 4 cut(s) 1434, 1519, 1583, 1836
BstMWI GCNNNNNNNGC 1 cut(s) 661
BstNI CCWGG 3 cut(s) 1057, 1524, 1545
BstNSI RCATGY 2 cut(s) 549, 1164
BstPAI GACNNNNGTC 2 cut(s) 420, 1131
BstSCI CCNGG 4 cut(s) 1055, 1522, 1543, 1579
BstSLI GKGCMC 1 cut(s) 1063
BstV1I GCAGC 2 cut(s) 254, 1560
BstV2I GAAGAC 1 cut(s) 618
BstX2I RGATCY 1 cut(s) 1583
BstYI RGATCY 1 cut(s) 1583
Bsu36I CCTNAGG 1 cut(s) 1185
BsuRI GGCC 4 cut(s) 1061, 1273, 1716, 1792
BtsCI GGATG 5 cut(s) 103, 338, 788, 814, 1806
BtsI GCAGTG 1 cut(s) 108
BtsIMutI CAGTG 1 cut(s) 108
Cac8I GCNNGC 3 cut(s) 686, 1297, 1718
CaiI CAGNNNCTG 1 cut(s) 181
CciI TCATGA 1 cut(s) 489
CfoI GCGC 2 cut(s) 1453, 1735
Cfr13I GGNCC 4 cut(s) 1059, 1060, 1714, 1791
CsiI ACCWGGT 1 cut(s) 1543
Csp6I GTAC 1 cut(s) 1817
CviAII CATG 5 cut(s) 490, 546, 560, 1161, 1333
CviQI GTAC 1 cut(s) 1817
DdeI CTNAG 5 cut(s) 433, 899, 1185, 1325, 1631
DpnI GATC 4 cut(s) 1436, 1521, 1585, 1838
DpnII GATC 4 cut(s) 1434, 1519, 1583, 1836
DraIII CACNNNGTG 1 cut(s) 1547
EaeI YGGCCR 1 cut(s) 1271
Eam1104I CTCTTC 2 cut(s) 765, 1761
EarI CTCTTC 2 cut(s) 765, 1761
Ecl136II GAGCTC 1 cut(s) 1830
Eco24I GRGCYC 2 cut(s) 1063, 1832
Eco31I GGTCTC 2 cut(s) 155, 207
Eco53kI GAGCTC 1 cut(s) 1830
Eco57I CTGAAG 1 cut(s) 1196
Eco81I CCTNAGG 1 cut(s) 1185
Eco88I CYCGRG 1 cut(s) 992
EcoICRI GAGCTC 1 cut(s) 1830
EcoO109I RGGNCCY 3 cut(s) 1059, 1060, 1714
EcoRI GAATTC 1 cut(s) 1552
EcoRII CCWGG 3 cut(s) 1055, 1522, 1543
EcoT38I GRGCYC 2 cut(s) 1063, 1832
FaeI CATG 5 cut(s) 493, 549, 563, 1164, 1336
FaqI GGGAC 1 cut(s) 1203
FatI CATG 5 cut(s) 489, 545, 559, 1160, 1332
Fnu4HI GCNGC 2 cut(s) 268, 1574
FokI GGATG 5 cut(s) 110, 345, 795, 821, 1793
FriOI GRGCYC 2 cut(s) 1063, 1832
Fsp4HI GCNGC 2 cut(s) 268, 1574
FspBI CTAG 3 cut(s) 638, 698, 1840
FspI TGCGCA 1 cut(s) 1734
GlaI GCGC 2 cut(s) 1452, 1734
GluI GCNGC 2 cut(s) 268, 1574
GsuI CTGGAG 2 cut(s) 341, 1118
HaeII RGCGCY 1 cut(s) 1454
HaeIII GGCC 4 cut(s) 1061, 1273, 1716, 1792
HapII CCGG 2 cut(s) 806, 1581
HhaI GCGC 2 cut(s) 1453, 1735
Hin1II CATG 5 cut(s) 493, 549, 563, 1164, 1336
Hin6I GCGC 2 cut(s) 1451, 1733
HinP1I GCGC 2 cut(s) 1451, 1733
HincII GTYRAC 1 cut(s) 1136
HindII GTYRAC 1 cut(s) 1136
HindIII AAGCTT 6 cut(s) 153, 299, 496, 686, 1293, 1691
HinfI GANTC 7 cut(s) 178, 305, 380, 471, 857, 913, 1460
HpaII CCGG 2 cut(s) 806, 1581
HphI GGTGA 5 cut(s) 358, 740, 1195, 1559, 1645
Hpy166II GTNNAC 5 cut(s) 290, 967, 1091, 1136, 1817
Hpy188I TCNGA 6 cut(s) 56, 177, 183, 463, 849, 1689
Hpy8I GTNNAC 5 cut(s) 290, 967, 1091, 1136, 1817
HpyAV CCTTC 9 cut(s) 128, 721, 731, 1373, 1404, 1552, 1558, 1705, 1712
HpyCH4III ACNGT 4 cut(s) 1016, 1194, 1376, 1685
HpyCH4IV ACGT 1 cut(s) 694
HpyF10VI GCNNNNNNNGC 1 cut(s) 661
HpyF3I CTNAG 5 cut(s) 433, 899, 1185, 1325, 1631
HpySE526I ACGT 1 cut(s) 694
Hsp92II CATG 5 cut(s) 493, 549, 563, 1164, 1336
HspAI GCGC 2 cut(s) 1451, 1733
Kpn2I TCCGGA 1 cut(s) 805
Kzo9I GATC 4 cut(s) 1434, 1519, 1583, 1836
LmnI GCTCC 4 cut(s) 538, 895, 1581, 1835
Lsp1109I GCAGC 2 cut(s) 254, 1560
LweI GCATC 6 cut(s) 88, 754, 799, 1326, 1560, 1763
MabI ACCWGGT 1 cut(s) 1543
MaeI CTAG 3 cut(s) 638, 698, 1840
MaeII ACGT 1 cut(s) 694
MaeIII GTNAC 2 cut(s) 137, 1591
MalI GATC 4 cut(s) 1436, 1521, 1585, 1838
MboI GATC 4 cut(s) 1434, 1519, 1583, 1836
MboII GAAGA 8 cut(s) 205, 307, 623, 752, 915, 1154, 1202, 1778
MfeI CAATTG 2 cut(s) 59, 665
MflI RGATCY 1 cut(s) 1583
MhlI GDGCHC 2 cut(s) 1063, 1832
MlsI TGGCCA 1 cut(s) 1273
MluNI TGGCCA 1 cut(s) 1273
Mox20I TGGCCA 1 cut(s) 1273
MroI TCCGGA 1 cut(s) 805
MroXI GAANNNNTTC 1 cut(s) 1146
MscI TGGCCA 1 cut(s) 1273
MseI TTAA 9 cut(s) 168, 510, 690, 831, 932, 1065, 1103, 1173, 1824
Msp20I TGGCCA 1 cut(s) 1273
MspA1I CMGCKG 2 cut(s) 319, 1096
MspCI CTTAAG 1 cut(s) 167
MspI CCGG 2 cut(s) 806, 1581
MspR9I CCNGG 4 cut(s) 1057, 1524, 1545, 1581
MunI CAATTG 2 cut(s) 59, 665
MvaI CCWGG 3 cut(s) 1057, 1524, 1545
MwoI GCNNNNNNNGC 1 cut(s) 661
NciI CCSGG 1 cut(s) 1581
NdeII GATC 4 cut(s) 1434, 1519, 1583, 1836
NlaIII CATG 5 cut(s) 493, 549, 563, 1164, 1336
NlaIV GGNNCC 4 cut(s) 718, 732, 1061, 1118
NmeAIII GCCGAG 1 cut(s) 1281
NsbI TGCGCA 1 cut(s) 1734
NspI RCATGY 2 cut(s) 549, 1164
NspV TTCGAA 1 cut(s) 1556
PaeR7I CTCGAG 1 cut(s) 992
PagI TCATGA 1 cut(s) 489
PciI ACATGT 1 cut(s) 545
PcsI WCGNNNNNNNCGW 1 cut(s) 1296
PdmI GAANNNNTTC 1 cut(s) 1146
PfeI GAWTC 7 cut(s) 178, 305, 380, 471, 857, 913, 1460
PkrI GCNGC 2 cut(s) 269, 1575
PscI ACATGT 1 cut(s) 545
PshAI GACNNNNGTC 2 cut(s) 420, 1131
PsiI TTATAA 1 cut(s) 366
Psp124BI GAGCTC 1 cut(s) 1832
Psp6I CCWGG 3 cut(s) 1055, 1522, 1543
PspGI CCWGG 3 cut(s) 1055, 1522, 1543
PspN4I GGNNCC 4 cut(s) 718, 732, 1061, 1118
PspOMI GGGCCC 1 cut(s) 1059
PspPI GGNCC 4 cut(s) 1059, 1060, 1714, 1791
PsrI GAACNNNNNNTAC 2 cut(s) 69, 101
PstNI CAGNNNCTG 1 cut(s) 181
PsuI RGATCY 1 cut(s) 1583
PvuII CAGCTG 2 cut(s) 319, 1096
RsaI GTAC 1 cut(s) 1818
RsaNI GTAC 1 cut(s) 1817
SacI GAGCTC 1 cut(s) 1832
SaqAI TTAA 9 cut(s) 168, 510, 690, 831, 932, 1065, 1103, 1173, 1824
SatI GCNGC 2 cut(s) 268, 1574
Sau3AI GATC 4 cut(s) 1434, 1519, 1583, 1836
Sau96I GGNCC 4 cut(s) 1059, 1060, 1714, 1791
ScrFI CCNGG 4 cut(s) 1057, 1524, 1545, 1581
SduI GDGCHC 2 cut(s) 1063, 1832
SexAI ACCWGGT 1 cut(s) 1543
SfaNI GCATC 6 cut(s) 88, 754, 799, 1326, 1560, 1763
Sfr274I CTCGAG 1 cut(s) 992
SfuI TTCGAA 1 cut(s) 1556
SlaI CTCGAG 1 cut(s) 992
SmlI CTYRAG 6 cut(s) 119, 167, 992, 1352, 1464, 1739
SmoI CTYRAG 6 cut(s) 119, 167, 992, 1352, 1464, 1739
SspI AATATT 3 cut(s) 188, 457, 523
SspMI CTAG 3 cut(s) 638, 698, 1840
SstI GAGCTC 1 cut(s) 1832
StyD4I CCNGG 4 cut(s) 1055, 1522, 1543, 1579
TaaI ACNGT 4 cut(s) 1016, 1194, 1376, 1685
TaiI ACGT 1 cut(s) 697
TaqI TCGA 6 cut(s) 993, 1122, 1140, 1290, 1556, 1835
TfiI GAWTC 7 cut(s) 178, 305, 380, 471, 857, 913, 1460
Tru1I TTAA 9 cut(s) 168, 510, 690, 831, 932, 1065, 1103, 1173, 1824
Tru9I TTAA 9 cut(s) 168, 510, 690, 831, 932, 1065, 1103, 1173, 1824
TscAI CASTG 1 cut(s) 108
TseI GCWGC 2 cut(s) 267, 1573
TspDTI ATGAA 7 cut(s) 297, 393, 478, 506, 1139, 1239, 1298
TspRI CASTG 1 cut(s) 108
Vha464I CTTAAG 1 cut(s) 167
XapI RAATTY 4 cut(s) 843, 1146, 1425, 1552
XbaI TCTAGA 1 cut(s) 697
XceI RCATGY 2 cut(s) 549, 1164
XhoI CTCGAG 1 cut(s) 992
XmnI GAANNNNTTC 1 cut(s) 1146
XspI CTAG 3 cut(s) 638, 698, 1840
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.