FvH4_7g25680

disease resistance

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb7
Physical Location & Seq
Forward (+)
19599387 .. 19602200
2814 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_7g25680.t1

Sequence Viewer

Length: 2814 bp
ATGGAAGATTTGGGACGTAACTATTTTCAAGAGTTGGTGTCTAGATCATTGTTTCAAAAATCAAGAAATGGAAAGTCGCGGTACATAATGCATGACCTCGTTACTGATTTGGCACGTTGGGCTGCAGGAAGTTCATGTTGTAGATTGGAGGATATGCAGAATTATGACTCGCAGCAACGTACATGTTTGCCCAAGATTCGTCATTCGTCTTACATTCTTGGAAAGTATGATGGAGTTAAGAAGTTTGAGGTCTATTCTGAAGCTACATCTTTGCGAACGTTCTTACCACTTGGGTCACTTTCAATTCATTATCTGGCTCATAAGGTTACTTCTTATTTATTGACCAAACTCCATTACTTACGACTGCTCTCTCTAAATGGATACCGAATAACCGAGTTGCCAGATACAATTGGTGAATTGAAGCATCTACGGTATCTTGATCTCTCCTACACATTGATAGAAAGTTTGCCAGACTCAACAACCACTCTTTACAACTTGCAGACATTGATATTGAAATGGTGTGGTCGGTTGAAGGCACTGCCCACAAGCATGAGGAACCTAGTTAATTTGCGTCATCTCAACAATTCAGATACAGGGTCATTGGAAGAAATGCCTCCTCAGCTTGGTCAATTGACTAACCTCCAAACATTGCCTGAGTTTGTTATTGGCAAAGGTAGTGGATCAGGAGTAAGAGAGATTGAGTCATTATTGCATCTGCAAGGGACATTGCACATCTCAAGACTAGAAAATGTGATTTATGTCGAGGACGCCAGGAGTGCCAACTGCTTAAAGAGCAAGGAAAGGCTTGAAGCCCTATTTCTTGAATGGTCTTCTTCGAGTGTCTCAACAGAAGATGCAGCAATTGTGCTTGACATGTTACAACCTCATAGCAAGCTCAAAAAGCTCACCATTAAAGGTTATGCTGGATTGAAATTTCCAAAATGGATTGGAGATCCTTCATTCTCTACAATGGTGCAGGTAATGTTAAAAGGTTGTAATCATTGTCAATTCTTGCCACCATTCGGACAATTGCCTTGTCTCAAAGAACTTTATATACAAGAAATGGATGCAGTGGAGAGTACTGGTGTTGAGTTTTATGGAGAAGGTAACTTGCCGTTTCAAGCTTTAAAGACCTTGGAGTTTTGGAATCTGAAAAATTGGAAGAAGTGGTCTCATTGCCAACAAAATGAGGGGGTGGGGGTTTTCTCTTGCCTGAAAAGGCTTTCCATCAGGGGCTGCCCCAAATTGGAGGGTGATTTACCGGAGAAGCTTGATTCATTAGCACAACTTCAACTATTTGGATGTGAGGAATTGGTGGTTTCGGTATCCAAATATAAACAGCTTCATAGATCATACATTGAACAGTGCAAGATGGTGGTGTATGACACAAGTACAGTTGGATTTGACTTACTAGAGAGTTTGATATTTTCAAATATACCAGAGTTGAGATTCCAAACAGAGACGTTCATGAAAAGCTTGAAAAATGTTAAAGAGTTGAAGATCATTGGTTGTGAGGAGCTTACATGTTGCTTTCAAAATGAGGATAGATTACTACAACACTTGATTTCTCTTGGTTGTTTGTATATCGAAGGCAACTCCATCCTCGTTGAAAAGCTAGGGATTGAAGCAGAGCAGTTGGTTCAATTGCAAATCTTGGATTGCAATATTGAACGTCTGGAATTAAGCAAGTGTGGAAGCCTTATGAAGGTACCAGAAGGATTGCATCACCTTAGATCACTTCAAGAGCTGCACATAAGTAAATGTTCAAGTCTTGTTTCTTTTCCTGATGTTGGTCTGCCACCTTGTCTCCAAGTCACAGTGATTGTGGACTGCGGATCTCTGTTGCACTTTGCAAAATACCAGATATCTCTCAGCCTAAAAAGAATAGAGATAAGGAATTGTGGGAATTTGAAGTCATTAATAGAGAAAGAGGAGGAGGTGGATAACGGTTCTTCTTCTTCTCGTCTTGAGAGTTTGAGAATATGGCTTTGTCCCTCTTTGATGTGCTTATTATGCAAAAGTCAATTACCCAGGTCTCTTAAACAGCTTGAGATAATGTGTTGTGGACAGCTGGAGCTAATCAGTGAGAGGTTCCTCGATGACAGCTGGCAACTCGAAGAAATTGACATCAGGGACTGCCCAAACCTGAAATCCTTGCCCGAGGGACTGTGCGGCCTCACCGACCGTCGGTCATTAATAATTTTTTATTGTCAAAGTCTTGTTTCGTTGCCGAGAATGAATGTGTGGCCAAGAGTGATACGGATCGAAAATTGCGATAAATTGGAGGTGGCACAGTTGGCGAGAGACATGATGCACACCAGTAATCTTGAAAAACTGGAAATTGATTACTTTGAAGGTTTGACGACTACAACTTTCTTCCCCACCAACCTAACAACACTGTCAATCTACAATATCAAGAACTGTAAGGCACTGATGGAATCTCAAGGGTTGCAGAGACTCACCTCTTTGAGAGAATTGGATCTGAGGGGTGAAGATGATGGAGGTCTGGTGTCATTTCCACCTGCTGCTAAGAATTCAAAGGAGACGGAGATACTGCTTCCCAGATCTCTTGTTAAGTTGAGTATTGCAGGCTTCCCAAATCTAAAGAAACTGAGCAAGGGCTTTCAATTCCTCACCTCTCTTGAAAGTATTTGGATCTTCAACTGTCCGAAGCTTACAACCCTTCCAGTGGAGGAAGGCCTGCCTCTTTCACTTGCGCTACTTTATACTAGCAATTGTCCTCTGCTTGAAGAGAGATACAAAGGACGATACAGGCACAAGATAGCACACATCCCTTGCGTACTAATTAATTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

938

Amino Acids

106.59

Weight (kDa)

6.87

Isoelectric Point (pI)

50.33

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
WHD_DRP PF23559 1 - 38 1.5e-10 Disease resistance protein Winged helix domain
LRR_14 PF23598 112 - 382 2.1e-23 Leucine-rich repeat region
LRR_R13L1-DRL21 PF25019 231 - 355 1.1e-35 R13L1/DRL21 LRRs
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000070)

Species Orthologous Gene IDs
fragaria_vesca FvH4_7g00360 FvH4_7g00850 FvH4_7g02400 FvH4_7g02430 FvH4_7g02450 FvH4_7g25671 FvH4_7g25680 FvH4_7g25683 FvH4_7g26980 FvH4_7g27330 FvH4_7g27355 FvH4_7g27610 FvH4_7g27642 FvH4_7g27890 FvH4_7g27891 FvH4_7g27891 FvH4_7g27891 FvH4_7g28110 FvH4_7g28390
malus_domestica MD00G1070800.v1.1 MD00G1168000.v1.1 MD00G1168300.v1.1 MD00G1168700.v1.1 MD02G1293100.v1.1 MD02G1293200.v1.1 MD02G1314300.v1.1 MD03G1009000.v1.1 MD03G1009400.v1.1 MD03G1042300.v1.1 MD03G1042400.v1.1 MD07G1033600.v1.1 MD07G1033700.v1.1 MD07G1033900.v1.1 MD11G1011400.v1.1 MD11G1011700.v1.1 MD11G1029800.v1.1 MD11G1029900.v1.1 MD11G1030300.v1.1 MD11G1030400.v1.1 MD11G1030500.v1.1 MD11G1031300.v1.1 MD11G1031600.v1.1 MD11G1032000.v1.1 MD11G1033200.v1.1 MD11G1033600.v1.1 MD11G1033800.v1.1 MD11G1033900.v1.1 MD11G1034100.v1.1 MD11G1034400.v1.1 MD11G1040600.v1.1 MD11G1041100.v1.1 MD11G1043100.v1.1 MD11G1043500.v1.1 MD11G1044500.v1.1 MD11G1045100.v1.1 MD11G1045600.v1.1
prunus_persica Prupe.2G022400_v2.0.a1 Prupe.2G022400_v2.0.a1 Prupe.2G022400_v2.0.a1 Prupe.2G022500_v2.0.a1 Prupe.2G022500_v2.0.a1 Prupe.2G022900_v2.0.a1 Prupe.2G023500_v2.0.a1 Prupe.2G023500_v2.0.a1 Prupe.2G023500_v2.0.a1 Prupe.2G023500_v2.0.a1 Prupe.2G023500_v2.0.a1 Prupe.2G023500_v2.0.a1 Prupe.2G023600_v2.0.a1 Prupe.2G028000_v2.0.a1 Prupe.2G030200_v2.0.a1 Prupe.2G067600_v2.0.a1 Prupe.8G117900_v2.0.a1
pyrus_communis pycom02g26350 pycom03g03270 pycom07g02370 pycom11g00750 pycom11g00790 pycom11g02340 pycom11g02370 pycom11g02380 pycom11g02390 pycom11g02410 pycom11g02460 pycom11g02470 pycom11g02500 pycom11g02510 pycom11g02520 pycom11g02530 pycom11g02580 pycom11g02590 pycom11g02680 pycom11g02710 pycom11g02720 pycom11g02730 pycom11g02750 pycom11g02760 pycom11g02770 pycom11g03690 pycom13g25120 pycom13g25130 pycom13g25140 pycom13g25170 pycom13g25180 pycom13g25190 pycom13g25210
rosa_chinensis RchiOBHm_Chr1g0315001 RchiOBHm_Chr1g0315411 RchiOBHm_Chr1g0317951 RchiOBHm_Chr1g0319741 RchiOBHm_Chr1g0319841 RchiOBHm_Chr1g0319911 RchiOBHm_Chr1g0319991 RchiOBHm_Chr1g0320001 RchiOBHm_Chr1g0320021 RchiOBHm_Chr1g0320081 RchiOBHm_Chr1g0320111 RchiOBHm_Chr1g0320131 RchiOBHm_Chr1g0320161 RchiOBHm_Chr1g0320171 RchiOBHm_Chr1g0320241 RchiOBHm_Chr1g0320281 RchiOBHm_Chr1g0320411 RchiOBHm_Chr1g0320461 RchiOBHm_Chr1g0320551 RchiOBHm_Chr1g0320581 RchiOBHm_Chr1g0320661 RchiOBHm_Chr1g0320891 RchiOBHm_Chr1g0320971 RchiOBHm_Chr1g0321021 RchiOBHm_Chr1g0321031 RchiOBHm_Chr1g0321091 RchiOBHm_Chr1g0321351 RchiOBHm_Chr1g0321481 RchiOBHm_Chr1g0321491 RchiOBHm_Chr1g0327521 RchiOBHm_Chr1g0328061 RchiOBHm_Chr1g0334991 RchiOBHm_Chr1g0373781 RchiOBHm_Chr1g0373891 RchiOBHm_Chr1g0374841 RchiOBHm_Chr2g0131111 RchiOBHm_Chr2g0131121 RchiOBHm_Chr4g0408901 RchiOBHm_Chr5g0041691 RchiOBHm_Chr7g0237021
rosa_laevigata RLG00000019168 RLG00000030456 RLG00000030460 RLG00000030571
rosa_multiflora Rmu_co7963468.1_g000001 Rmu_co7991248.1_g000001 Rmu_co8195256.1_g000001 Rmu_co8312199.1_g000001 Rmu_co8349215.1_g000001 Rmu_co8351041.1_g000001 Rmu_co8422719.1_g000001 Rmu_co8450711.1_g000001 Rmu_co8465555.1_g000001 Rmu_co8489965.1_g000001 Rmu_sc0000087.1_g000014 Rmu_sc0000272.1_g000015 Rmu_sc0000724.1_g000006 Rmu_sc0000724.1_g000021 Rmu_sc0000724.1_g000022 Rmu_sc0000861.1_g000024 Rmu_sc0001049.1_g000006 Rmu_sc0001049.1_g000007 Rmu_sc0001512.1_g000001 Rmu_sc0002022.1_g000004 Rmu_sc0002063.1_g000011 Rmu_sc0002131.1_g000024 Rmu_sc0002337.1_g000012 Rmu_sc0002341.1_g000005 Rmu_sc0002539.1_g000117 Rmu_sc0002745.1_g000005 Rmu_sc0002745.1_g000006 Rmu_sc0003145.1_g000002 Rmu_sc0003199.1_g000007 Rmu_sc0003270.1_g000039 Rmu_sc0003270.1_g000040 Rmu_sc0003423.1_g000001 Rmu_sc0003423.1_g000002 Rmu_sc0003629.1_g000067 Rmu_sc0004039.1_g000002 Rmu_sc0004555.1_g000001 Rmu_sc0004555.1_g000005 Rmu_sc0004555.1_g000006 Rmu_sc0004947.1_g000025 Rmu_sc0004947.1_g000026 Rmu_sc0005255.1_g000025 Rmu_sc0007977.1_g000016 Rmu_sc0008752.1_g000005 Rmu_sc0009236.1_g000004 Rmu_sc0009236.1_g000008 Rmu_sc0009236.1_g000009 Rmu_sc0009236.1_g000010 Rmu_sc0011424.1_g000036 Rmu_sc0013413.1_g000001 Rmu_sc0013735.1_g000002 Rmu_sc0015304.1_g000002 Rmu_sc0015304.1_g000003 Rmu_sc0015585.1_g000001 Rmu_sc0018410.1_g000001 Rmu_sc0022723.1_g000001 Rmu_sc0022723.1_g000002 Rmu_sc0022724.1_g000001 Rmu_sc0023430.1_g000001 Rmu_sc0026053.1_g000001 Rmu_sc0026429.1_g000002 Rmu_sc0026647.1_g000001 Rmu_sc0031359.1_g000001 Rmu_ssc0000042.1_g000040 Rmu_ssc0000081.1_g000001 Rmu_ssc0000300.1_g000011
rosa_roxburghii Rroxscaffold_160G00433620 Rroxscaffold_160G00433990 Rroxscaffold_1G00038820 Rroxscaffold_2G00113190 Rroxscaffold_4G00283240 Rroxscaffold_4G00283930 Rroxscaffold_4G00284010 Rroxscaffold_4G00322600 Rroxscaffold_4G00327710 Rroxscaffold_4G00328100 Rroxscaffold_4G00328130 Rroxscaffold_4G00331590 Rroxscaffold_5G00353280
rosa_rugosa Rorug01G0004200 Rorug01G0018800 Rorug01G0018900 Rorug01G0029900 Rorug01G0030000 Rorug01G0030000 Rorug01G0030000 Rorug01G0030200 Rorug01G0030300 Rorug01G0030800 Rorug01G0032400 Rorug01G0032900 Rorug01G0055800 Rorug01G0067600 Rorug01G0067700 Rorug01G0067800 Rorug01G0067900 Rorug01G0068000 Rorug01G0379500 Rorug01G0379600 Rorug01G0379600 Rorug01G0385200 Rorug01G0385300 Rorug02G0295100 Rorug04G0088500 Rorug04G0088600 Rorug05G0194900 Rorug07G0301400
rosa_samantha Rh1AG014800 Rh1AG015200 Rh1AG030500 Rh1AG041800 Rh1AG042300 Rh1AG042700 Rh1AG042800 Rh1AG042900 Rh1AG045000 Rh1AG085100 Rh1AG085200 Rh1AG388600 Rh1AG396700 Rh1AG396900 Rh1BG007300 Rh1BG039200 Rh1BG039600 Rh1BG042800 Rh1BG067300 Rh1BG109700 Rh1BG109900 Rh1BG354000 Rh1CG043800 Rh1CG044400 Rh1DG008600 Rh1DG022900 Rh1DG023400 Rh1DG023600 Rh1DG023900 Rh1DG024100 Rh1DG024400 Rh1DG024500 Rh1DG025500 Rh1DG025700 Rh1DG026500 Rh1DG026800 Rh1DG038900 Rh1DG048800 Rh1DG049300 Rh1DG051700 Rh1DG052000 Rh1DG146200 Rh1DG383500 Rh2BG354900 Rh2CG333600 Rh4BG149600 Rh4BG149700 Rh4CG160600
rosa_wichuraiana Rw0G001100 Rw0G001130 Rw0G001180 Rw0G012580 Rw1G003480 Rw1G003540 Rw1G003600 Rw1G003640 Rw1G003670 Rw1G003750 Rw1G003940 Rw1G006650 Rw1G034550 Rw1G034560 Rw1G034650 Rw1G034660 Rw1G035170 Rw1G035190 Rw1G037060 Rw2G028210 Rw4G012540 Rw5G026370 Rw7G037900

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 2530
Acc36I ACCTGC 2 cut(s) 967, 2530
Acc65I GGTACC 1 cut(s) 1708
AccB1I GGYRCC 1 cut(s) 1708
AccII CGCG 1 cut(s) 79
AciI CCGC 3 cut(s) 79, 1833, 2172
AclI AACGTT 1 cut(s) 278
AclWI GGATC 6 cut(s) 688, 947, 1843, 2270, 2487, 2663
AcoI YGGCCR 1 cut(s) 2246
AcsI RAATTY 3 cut(s) 932, 1906, 2533
AcuI CTGAAG 1 cut(s) 279
AcyI GRCGYC 1 cut(s) 768
AfaI GTAC 6 cut(s) 83, 181, 1081, 1393, 1710, 2802
AfiI CCNNNNNNNGG 7 cut(s) 623, 1022, 1246, 1705, 1790, 2187, 2689
AflIII ACRYGT 3 cut(s) 182, 873, 1523
AhdI GACNNNNNGTC 1 cut(s) 2188
AjnI CCWGG 2 cut(s) 770, 2030
Alw26I GTCTC 9 cut(s) 847, 1043, 1176, 1454, 1811, 2040, 2298, 2449, 2537
AlwI GGATC 6 cut(s) 688, 947, 1843, 2270, 2487, 2663
AlwNI CAGNNNCTG 2 cut(s) 1236, 2136
Ama87I CYCGRG 1 cut(s) 2159
AoxI GGCC 3 cut(s) 2173, 2246, 2698
ApeKI GCWGC 6 cut(s) 122, 172, 857, 1236, 1747, 2525
ApoI RAATTY 3 cut(s) 932, 1906, 2533
AseI ATTAAT 3 cut(s) 1919, 2195, 2808
Asp718I GGTACC 1 cut(s) 1708
AspLEI GCGC 1 cut(s) 2719
AsuHPI GGTGA 8 cut(s) 425, 898, 1265, 1718, 2170, 2452, 2501, 2626
AvaI CYCGRG 1 cut(s) 2159
BalI TGGCCA 1 cut(s) 2248
BanI GGYRCC 1 cut(s) 1708
BbsI GAAGAC 1 cut(s) 822
BbvCI CCTCAGC 1 cut(s) 618
BbvI GCAGC 6 cut(s) 109, 184, 869, 1223, 1734, 2512
BccI CCATC 6 cut(s) 224, 1235, 1366, 1607, 2428, 2492
BceAI ACGGC 1 cut(s) 1099
BciT130I CCWGG 2 cut(s) 772, 2032
BciVI GTATCC 2 cut(s) 374, 1336
BcoDI GTCTC 9 cut(s) 847, 1043, 1176, 1454, 1811, 2040, 2298, 2449, 2537
BfaI CTAG 6 cut(s) 42, 560, 743, 1412, 1616, 2730
BfmI CTRYAG 1 cut(s) 123
BfuAI ACCTGC 2 cut(s) 967, 2530
BfuI GTATCC 2 cut(s) 374, 1336
BglII AGATCT 1 cut(s) 2564
BisI GCNGC 7 cut(s) 123, 173, 858, 1237, 1748, 2173, 2526
BlsI GCNGC 7 cut(s) 124, 174, 859, 1238, 1749, 2174, 2527
BmcAI AGTACT 1 cut(s) 1081
Bme1390I CCNGG 2 cut(s) 772, 2032
BmeRI GACNNNNNGTC 1 cut(s) 2188
BmeT110I CYCGRG 1 cut(s) 2159
BmiI GGNNCC 3 cut(s) 557, 1710, 2093
BmrFI CCNGG 2 cut(s) 772, 2032
BmsI GCATC 6 cut(s) 433, 721, 844, 1057, 1732, 2301
BpiI GAAGAC 1 cut(s) 822
BpmI CTGGAG 1 cut(s) 2093
Bpu10I CCTNAGC 1 cut(s) 618
BpuEI CTTGAG 4 cut(s) 721, 1988, 2069, 2427
BsaBI GATNNNNATC 1 cut(s) 2261
BsaHI GRCGYC 1 cut(s) 768
BsaI GGTCTC 2 cut(s) 1176, 2040
BsaJI CCNNGG 3 cut(s) 1134, 2030, 2160
BsaWI WCCGGW 1 cut(s) 1261
BsaXI ACNNNNNCTCC 4 cut(s) 1791, 1821, 2493, 2523
Bsc4I CCNNNNNNNGG 7 cut(s) 623, 1022, 1246, 1705, 1790, 2187, 2689
Bse1I ACTGG 4 cut(s) 1087, 2319, 2340, 2687
Bse3DI GCAATG 3 cut(s) 647, 725, 1174
Bse8I GATNNNNATC 1 cut(s) 2261
BseBI CCWGG 2 cut(s) 772, 2032
BseDI CCNNGG 3 cut(s) 1134, 2030, 2160
BseGI GGATG 4 cut(s) 1072, 1307, 1599, 2790
BseJI GATNNNNATC 1 cut(s) 2261
BseLI CCNNNNNNNGG 7 cut(s) 623, 1022, 1246, 1705, 1790, 2187, 2689
BseMI GCAATG 3 cut(s) 647, 725, 1174
BseMII CTCAG 5 cut(s) 632, 645, 1885, 2474, 2603
BseNI ACTGG 4 cut(s) 1087, 2319, 2340, 2687
BseRI GAGGAG 4 cut(s) 606, 1529, 1946, 1949
BseXI GCAGC 6 cut(s) 109, 184, 869, 1223, 1734, 2512
BsgI GTGCAG 2 cut(s) 995, 1733
Bsh1236I CGCG 1 cut(s) 79
Bsh1285I CGRYCG 1 cut(s) 2185
BshFI GGCC 3 cut(s) 2175, 2248, 2700
BshNI GGYRCC 1 cut(s) 1708
BsiEI CGRYCG 1 cut(s) 2185
BsiHKCI CYCGRG 1 cut(s) 2159
BsiSI CCGG 1 cut(s) 1262
BslFI GGGAC 5 cut(s) 27, 736, 1977, 2147, 2178
BslI CCNNNNNNNGG 7 cut(s) 623, 1022, 1246, 1705, 1790, 2187, 2689
BsmAI GTCTC 9 cut(s) 847, 1043, 1176, 1454, 1811, 2040, 2298, 2449, 2537
BsmBI CGTCTC 2 cut(s) 1454, 2537
BsmFI GGGAC 5 cut(s) 27, 736, 1977, 2147, 2178
BsnI GGCC 3 cut(s) 2175, 2248, 2700
Bso31I GGTCTC 2 cut(s) 1176, 2040
BsoBI CYCGRG 1 cut(s) 2159
BspACI CCGC 3 cut(s) 79, 1833, 2172
BspANI GGCC 3 cut(s) 2175, 2248, 2700
BspCNI CTCAG 5 cut(s) 631, 646, 1884, 2475, 2604
BspFNI CGCG 1 cut(s) 79
BspHI TCATGA 1 cut(s) 1467
BspLI GGNNCC 3 cut(s) 557, 1710, 2093
BspMAI CTGCAG 1 cut(s) 127
BspMI ACCTGC 2 cut(s) 967, 2530
BspPI GGATC 6 cut(s) 688, 947, 1843, 2270, 2487, 2663
BspT107I GGYRCC 1 cut(s) 1708
BspTNI GGTCTC 2 cut(s) 1176, 2040
BsrDI GCAATG 3 cut(s) 647, 725, 1174
BsrI ACTGG 4 cut(s) 1087, 2319, 2340, 2687
BssECI CCNNGG 3 cut(s) 1134, 2030, 2160
BssNI GRCGYC 1 cut(s) 768
BssT1I CCWWGG 1 cut(s) 1134
Bst2UI CCWGG 2 cut(s) 772, 2032
Bst6I CTCTTC 1 cut(s) 2745
BstACI GRCGYC 1 cut(s) 768
BstC8I GCNNGC 4 cut(s) 893, 2108, 2590, 2702
BstDEI CTNAG 7 cut(s) 618, 654, 1730, 1871, 2483, 2529, 2612
BstENI CCTNNNNNAGG 1 cut(s) 1703
BstF5I GGATG 4 cut(s) 1072, 1307, 1599, 2790
BstFNI CGCG 1 cut(s) 79
BstHHI GCGC 1 cut(s) 2719
BstMAI GTCTC 9 cut(s) 847, 1043, 1176, 1454, 1811, 2040, 2298, 2449, 2537
BstMCI CGRYCG 1 cut(s) 2185
BstMWI GCNNNNNNNGC 7 cut(s) 119, 619, 776, 792, 901, 2013, 2297
BstNI CCWGG 2 cut(s) 772, 2032
BstNSI RCATGY 3 cut(s) 186, 877, 1527
BstSCI CCNGG 2 cut(s) 770, 2030
BstSFI CTRYAG 1 cut(s) 123
BstUI CGCG 1 cut(s) 79
BstV1I GCAGC 6 cut(s) 109, 184, 869, 1223, 1734, 2512
BstV2I GAAGAC 1 cut(s) 822
BstX2I RGATCY 5 cut(s) 952, 1835, 2479, 2564, 2655
BstYI RGATCY 5 cut(s) 952, 1835, 2479, 2564, 2655
BsuI GTATCC 2 cut(s) 374, 1336
BsuRI GGCC 3 cut(s) 2175, 2248, 2700
BtsCI GGATG 4 cut(s) 1072, 1307, 1599, 2790
BtsI GCAGTG 2 cut(s) 536, 1077
BtsIMutI CAGTG 8 cut(s) 536, 1077, 1370, 1824, 2089, 2396, 2429, 2694
BveI ACCTGC 2 cut(s) 967, 2530
Cac8I GCNNGC 4 cut(s) 893, 2108, 2590, 2702
CaiI CAGNNNCTG 2 cut(s) 1236, 2136
CciI TCATGA 1 cut(s) 1467
CfoI GCGC 1 cut(s) 2719
CseI GACGC 2 cut(s) 560, 776
Csp6I GTAC 6 cut(s) 82, 180, 1080, 1392, 1709, 2801
CspCI CAANNNNNGTGG 2 cut(s) 658, 693
CviAII CATG 8 cut(s) 92, 135, 183, 550, 874, 1468, 1524, 2308
CviQI GTAC 6 cut(s) 82, 180, 1080, 1392, 1709, 2801
DdeI CTNAG 7 cut(s) 618, 654, 1730, 1871, 2483, 2529, 2612
DraI TTTAAA 1 cut(s) 1128
DriI GACNNNNNGTC 1 cut(s) 2188
EaeI YGGCCR 1 cut(s) 2246
Eam1104I CTCTTC 1 cut(s) 2745
Eam1105I GACNNNNNGTC 1 cut(s) 2188
EarI CTCTTC 1 cut(s) 2745
Eco130I CCWWGG 1 cut(s) 1134
Eco147I AGGCCT 1 cut(s) 2700
Eco31I GGTCTC 2 cut(s) 1176, 2040
Eco32I GATATC 1 cut(s) 1866
Eco57I CTGAAG 1 cut(s) 279
Eco88I CYCGRG 1 cut(s) 2159
EcoNI CCTNNNNNAGG 1 cut(s) 1703
EcoRI GAATTC 1 cut(s) 2533
EcoRII CCWGG 2 cut(s) 770, 2030
EcoRV GATATC 1 cut(s) 1866
EcoT14I CCWWGG 1 cut(s) 1134
EcoT22I ATGCAT 1 cut(s) 93
ErhI CCWWGG 1 cut(s) 1134
Esp3I CGTCTC 2 cut(s) 1454, 2537
FaeI CATG 8 cut(s) 95, 138, 186, 553, 877, 1471, 1527, 2311
FaqI GGGAC 5 cut(s) 27, 736, 1977, 2147, 2178
FatI CATG 8 cut(s) 91, 134, 182, 549, 873, 1467, 1523, 2307
Fnu4HI GCNGC 7 cut(s) 123, 173, 858, 1237, 1748, 2173, 2526
FokI GGATG 4 cut(s) 1079, 1314, 1586, 2777
Fsp4HI GCNGC 7 cut(s) 123, 173, 858, 1237, 1748, 2173, 2526
FspBI CTAG 6 cut(s) 42, 560, 743, 1412, 1616, 2730
GlaI GCGC 1 cut(s) 2718
GluI GCNGC 7 cut(s) 123, 173, 858, 1237, 1748, 2173, 2526
GsuI CTGGAG 1 cut(s) 2093
HaeIII GGCC 3 cut(s) 2175, 2248, 2700
HapII CCGG 1 cut(s) 1262
HgaI GACGC 2 cut(s) 560, 776
HhaI GCGC 1 cut(s) 2719
Hin1I GRCGYC 1 cut(s) 768
Hin1II CATG 8 cut(s) 95, 138, 186, 553, 877, 1471, 1527, 2311
Hin6I GCGC 1 cut(s) 2717
HinP1I GCGC 1 cut(s) 2717
HindIII AAGCTT 4 cut(s) 1122, 1268, 1474, 2672
HinfI GANTC 9 cut(s) 167, 196, 473, 701, 1147, 1274, 1449, 2438, 2457
HpaII CCGG 1 cut(s) 1262
HphI GGTGA 8 cut(s) 425, 898, 1265, 1718, 2170, 2452, 2501, 2626
Hpy166II GTNNAC 2 cut(s) 1828, 2066
Hpy188I TCNGA 6 cut(s) 259, 589, 1025, 1152, 2484, 2670
Hpy8I GTNNAC 2 cut(s) 1828, 2066
Hpy99I CGWCG 1 cut(s) 2190
HpyAV CCTTC 9 cut(s) 526, 966, 1097, 1583, 1699, 1709, 2348, 2690, 2693
HpyCH4IV ACGT 6 cut(s) 16, 115, 178, 278, 1463, 1672
HpyF10VI GCNNNNNNNGC 7 cut(s) 119, 619, 776, 792, 901, 2013, 2297
HpyF3I CTNAG 7 cut(s) 618, 654, 1730, 1871, 2483, 2529, 2612
HpySE526I ACGT 6 cut(s) 16, 115, 178, 278, 1463, 1672
Hsp92I GRCGYC 1 cut(s) 768
Hsp92II CATG 8 cut(s) 95, 138, 186, 553, 877, 1471, 1527, 2311
HspAI GCGC 1 cut(s) 2717
KpnI GGTACC 1 cut(s) 1712
LmnI GCTCC 2 cut(s) 1516, 2074
Lsp1109I GCAGC 6 cut(s) 109, 184, 869, 1223, 1734, 2512
LweI GCATC 6 cut(s) 433, 721, 844, 1057, 1732, 2301
MaeI CTAG 6 cut(s) 42, 560, 743, 1412, 1616, 2730
MaeII ACGT 6 cut(s) 16, 115, 178, 278, 1463, 1672
MaeIII GTNAC 7 cut(s) 17, 100, 294, 325, 876, 1106, 1813
MfeI CAATTG 6 cut(s) 408, 629, 861, 1028, 1643, 2734
MflI RGATCY 5 cut(s) 952, 1835, 2479, 2564, 2655
MlsI TGGCCA 1 cut(s) 2248
MluNI TGGCCA 1 cut(s) 2248
MlyI GAGTC 4 cut(s) 161, 467, 710, 2451
MmeI TCCRAC 1 cut(s) 1378
Mox20I TGGCCA 1 cut(s) 2248
Mph1103I ATGCAT 1 cut(s) 93
MscI TGGCCA 1 cut(s) 2248
MslI CAYNNNNRTG 1 cut(s) 548
Msp20I TGGCCA 1 cut(s) 2248
MspA1I CMGCKG 2 cut(s) 2071, 2106
MspI CCGG 1 cut(s) 1262
MspR9I CCNGG 2 cut(s) 772, 2032
MunI CAATTG 6 cut(s) 408, 629, 861, 1028, 1643, 2734
MvaI CCWGG 2 cut(s) 772, 2032
MvnI CGCG 1 cut(s) 79
MwoI GCNNNNNNNGC 7 cut(s) 119, 619, 776, 792, 901, 2013, 2297
NlaIII CATG 8 cut(s) 95, 138, 186, 553, 877, 1471, 1527, 2311
NlaIV GGNNCC 3 cut(s) 557, 1710, 2093
NmeAIII GCCGAG 1 cut(s) 2256
NmuCI GTSAC 2 cut(s) 294, 1813
NsiI ATGCAT 1 cut(s) 93
NspI RCATGY 3 cut(s) 186, 877, 1527
PacI TTAATTAA 1 cut(s) 2812
PagI TCATGA 1 cut(s) 1467
PaqCI CACCTGC 1 cut(s) 2530
PceI AGGCCT 1 cut(s) 2700
PciI ACATGT 3 cut(s) 182, 873, 1523
PcsI WCGNNNNNNNCGW 1 cut(s) 2271
PfeI GAWTC 5 cut(s) 196, 1147, 1274, 1449, 2438
PkrI GCNGC 7 cut(s) 124, 174, 859, 1238, 1749, 2174, 2527
PleI GAGTC 4 cut(s) 161, 467, 709, 2451
PpsI GAGTC 4 cut(s) 161, 467, 709, 2451
PscI ACATGT 3 cut(s) 182, 873, 1523
PshBI ATTAAT 3 cut(s) 1919, 2195, 2808
Psp1406I AACGTT 1 cut(s) 278
Psp6I CCWGG 2 cut(s) 770, 2030
PspGI CCWGG 2 cut(s) 770, 2030
PspN4I GGNNCC 3 cut(s) 557, 1710, 2093
PsrI GAACNNNNNNTAC 2 cut(s) 1038, 1070
PstI CTGCAG 1 cut(s) 127
PstNI CAGNNNCTG 2 cut(s) 1236, 2136
PsuI RGATCY 5 cut(s) 952, 1835, 2479, 2564, 2655
PvuII CAGCTG 2 cut(s) 2071, 2106
RsaI GTAC 6 cut(s) 83, 181, 1081, 1393, 1710, 2802
RsaNI GTAC 6 cut(s) 82, 180, 1080, 1392, 1709, 2801
RseI CAYNNNNRTG 1 cut(s) 548
SatI GCNGC 7 cut(s) 123, 173, 858, 1237, 1748, 2173, 2526
ScaI AGTACT 1 cut(s) 1081
SchI GAGTC 4 cut(s) 161, 467, 710, 2451
ScrFI CCNGG 2 cut(s) 772, 2032
SfaNI GCATC 6 cut(s) 433, 721, 844, 1057, 1732, 2301
SfcI CTRYAG 1 cut(s) 123
SmiMI CAYNNNNRTG 1 cut(s) 548
SmlI CTYRAG 4 cut(s) 736, 1967, 2048, 2442
SmoI CTYRAG 4 cut(s) 736, 1967, 2048, 2442
SseBI AGGCCT 1 cut(s) 2700
SsiI CCGC 3 cut(s) 79, 1833, 2172
SspI AATATT 1 cut(s) 1666
SspMI CTAG 6 cut(s) 42, 560, 743, 1412, 1616, 2730
StuI AGGCCT 1 cut(s) 2700
StyD4I CCNGG 2 cut(s) 770, 2030
StyI CCWWGG 1 cut(s) 1134
TaiI ACGT 6 cut(s) 19, 118, 181, 281, 1466, 1675
TaqI TCGA 6 cut(s) 762, 836, 1587, 2097, 2115, 2265
TaqII GACCGA 1 cut(s) 2178
TatI WGTACW 2 cut(s) 1079, 1391
TauI GCSGC 1 cut(s) 2175
TfiI GAWTC 5 cut(s) 196, 1147, 1274, 1449, 2438
TscAI CASTG 8 cut(s) 543, 1077, 1370, 1824, 2089, 2403, 2436, 2694
TseFI GTSAC 2 cut(s) 294, 1813
TseI GCWGC 6 cut(s) 122, 172, 857, 1236, 1747, 2525
Tsp45I GTSAC 2 cut(s) 294, 1813
TspDTI ATGAA 9 cut(s) 123, 296, 948, 1266, 1334, 1456, 1484, 1718, 2252
TspGWI ACGGA 2 cut(s) 2275, 2561
TspRI CASTG 8 cut(s) 543, 1077, 1370, 1824, 2089, 2403, 2436, 2694
VspI ATTAAT 3 cut(s) 1919, 2195, 2808
XagI CCTNNNNNAGG 1 cut(s) 1703
XapI RAATTY 3 cut(s) 932, 1906, 2533
XbaI TCTAGA 1 cut(s) 41
XceI RCATGY 3 cut(s) 186, 877, 1527
XspI CTAG 6 cut(s) 42, 560, 743, 1412, 1616, 2730
ZrmI AGTACT 1 cut(s) 1081
Zsp2I ATGCAT 1 cut(s) 93
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.