RchiOBHm_Chr1g0320241

disease resistance

Basic Information

Type: gene
Biological Identity
rosa_chinensis
1
Physical Location & Seq
Reverse (-)
7876146 .. 7878543
2398 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ55041

Sequence Viewer

Length: 2355 bp
ATGAAACAGTTTGATCTCAAGGTCTGGGTTTCAGTGTCTGACGACTTCGATCTTCAAACAGTGACGAGAGCTATATTTAAGGAAGTTACATCTCGGCCTTGTGATATGGATGAGTTCAGTCGACTTCAAGAAAATCTGAGCAAGGAGATCGGTGGTAAAAGGTTTTTGATTGTTTTAGATGATGTCTGGAGAACGTGTGGTTATGATTCATGGACAAAACTGCAAGCCCCCCTCCGTGGAGGAGCCAAGGGAAGTAAGGTAATGGTGACAACACGTGATGAAAAAGTTGCTGTATTGATGGGAGCCCCAGCCGGTGAAGTTTATTATTTAAAGACTCTATCAGATGAAGGTTGTTTGCAAGTATTTGAGCAGCATGTTAGCAATGACAGGCCACCGAATTTCGAGTTGCTTAAGAAGAAAATTGTTACGAACTGCAATGGATTGCCATTGGCTGCAAAAACTCTTGGTGGTGTTTTACGTTGTAAAGAAACTGACAAATGGGAGGAAATGCTGAATGACAAAATATGGAGTATATCAGATGAGAATAATATACCCCCAGTACTCAGATTGAGTTATCATTATCTCCCTTCACCTTTGAAGAGGTGCTTTGCCTATTGCTCAATACTTCCCAATGACTTTGAATTTGGGAAACCCCAATTAATCCTTCTGTGGATGGCAGAGGGTTTCCTTGAGCAAACAGAAGGGACTAAAGGAATGGAAGATATCGGTGACGAATATTTTGGGGAGCTATTATCTCGGTCATTATTTCAAACCTCGGGCAAAAACAGTTCATGCTATGTAATGCATGACCTTGTTGGTGATTTGGCACGATGGGCTGCTGCAGACACATTTTGTAGATTGGAGGATAAACAGCATGGTAGATGTTCTGCAAAGACTCGTCATCTGAGTTACATTTCTGCTAAGTTTGATGGGGAAAAAAGATTTGAGACACTTTCTGGAGCAAAACGCTTGCGGACTTTCCTACCACTTCCTGTTTCCCGTGGTTATGAGAATTATCTAACTCGTTATGCTACTTTTGATATATTGCCACAATTGAAGTACTTGCGGGTGCTCTCCTTCAATGGCTATAAACTGACCGAGGTGCCAAATTCCGTAGGTAAGTTGAGACATCTACGGTACCTTGATCTTTCTCACACATTAATAACGTGTTTGCCTGAGTCAACATGCATGCTTTACAACTTACAGACGTTAATATTAGAGAATTGTTCAAAATTGAAGACACTACCTTCAAACATGAGCAATTTATCAAATTTACGTCATCTCAACAATTCAAACATGCCTTCATTGGAAGAAATGCCTCCCAAAGTAAGTCGGTTGACTCATCTGCGAACTTTGCCTAATTTTGTGGTGGGGAAAGGTAGTGCATCAGGGATTGGAGAGATACAGTCATTGCATCTTCGTGTGACCTTGAGTGTTGGAAGATTGGAAAATGTGATTGATGTTGGGGATGCGAAGACGGCTCAAATAATGAACAAGGAAGGGCTGGAAATCTTGCAATTGGAATGGAGCGGCACAAGAGAGAAGGAGTTGGAGGTGCTGTGCAGTTTAGAACCTCATAAAAAGCTTAAGGAGCTGACCATCAAGGGCTACAATGGTTTCGAATTTTCAAAATGGATTGGACATCCTTCATTCTCTGATATGAAGTCTGTGAAATTGGAGAATTGTAAAAACTGTCGATTCTTACCTCCTCTTGGCCAATTACCTTTTCTGAAAAAACTTCAGATACAAGGACTGGCCAATGTTGAAAGTGTGGGTGCTGAGTTTTATGGAGAGTGCAGCTTGCCTTTTCCAGTGTTGGAAGTCCTGAGGTTCAAGGATATGCAAAATTGGAAGGAGTGGCTTCCTTGCAAAAGAGATGAAGAAATTCGAGTTTTCCCATGCATGGAAAAGCTTTCCATCCTTGGTTGCCCCAAATTGAAAGGTTGGTTGCCCAAGAACATGGATTCATTATCACAGCTGTATATTGCTGAATGTGAAGAGTTAGTGGTTTCAATAGCCAATTATAAACATCTTCGTATGCTGATCATCCACGGTTGTAAAAGGGTGGTGCACAGAAGTGGAGTTAAGTTTGAGTTACTGGAGATTATGGGGCTTCATAATATTTCAGAGTTCAGGCTCGAAATAGACGGGTTCATCAGAGGATTGCCAAAGCTTCAAGGATTGTGGATTACTGGTTGTGAAGAGTTGACATGTTTGTGGGAGAATGAGGATAGGTGGCTGCAGCGTCGAATTTCCAATATTATTGGAGGCAACATATCTGACTCCCCCTCTCACTTTATTCAAGAGCTAAGAGCACTCGGTAAGCTAGTTGGCCACCTTGCCTTGTACTTGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

784

Amino Acids

89.45

Weight (kDa)

8.26

Isoelectric Point (pI)

47.82

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
NB-ARC PF00931 2 - 128 1.3e-22 NB-ARC domain
WHD_DRP PF23559 208 - 276 2.3e-22 Disease resistance protein Winged helix domain
LRR_14 PF23598 349 - 614 6.5e-23 Leucine-rich repeat region
LRR_R13L1-DRL21 PF25019 465 - 584 3.1e-33 R13L1/DRL21 LRRs
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000070)

Species Orthologous Gene IDs
fragaria_vesca FvH4_7g00360 FvH4_7g00850 FvH4_7g02400 FvH4_7g02430 FvH4_7g02450 FvH4_7g25671 FvH4_7g25680 FvH4_7g25683 FvH4_7g26980 FvH4_7g27330 FvH4_7g27355 FvH4_7g27610 FvH4_7g27642 FvH4_7g27890 FvH4_7g27891 FvH4_7g27891 FvH4_7g27891 FvH4_7g28110 FvH4_7g28390
malus_domestica MD00G1070800.v1.1 MD00G1168000.v1.1 MD00G1168300.v1.1 MD00G1168700.v1.1 MD02G1293100.v1.1 MD02G1293200.v1.1 MD02G1314300.v1.1 MD03G1009000.v1.1 MD03G1009400.v1.1 MD03G1042300.v1.1 MD03G1042400.v1.1 MD07G1033600.v1.1 MD07G1033700.v1.1 MD07G1033900.v1.1 MD11G1011400.v1.1 MD11G1011700.v1.1 MD11G1029800.v1.1 MD11G1029900.v1.1 MD11G1030300.v1.1 MD11G1030400.v1.1 MD11G1030500.v1.1 MD11G1031300.v1.1 MD11G1031600.v1.1 MD11G1032000.v1.1 MD11G1033200.v1.1 MD11G1033600.v1.1 MD11G1033800.v1.1 MD11G1033900.v1.1 MD11G1034100.v1.1 MD11G1034400.v1.1 MD11G1040600.v1.1 MD11G1041100.v1.1 MD11G1043100.v1.1 MD11G1043500.v1.1 MD11G1044500.v1.1 MD11G1045100.v1.1 MD11G1045600.v1.1
prunus_persica Prupe.2G022400_v2.0.a1 Prupe.2G022400_v2.0.a1 Prupe.2G022400_v2.0.a1 Prupe.2G022500_v2.0.a1 Prupe.2G022500_v2.0.a1 Prupe.2G022900_v2.0.a1 Prupe.2G023500_v2.0.a1 Prupe.2G023500_v2.0.a1 Prupe.2G023500_v2.0.a1 Prupe.2G023500_v2.0.a1 Prupe.2G023500_v2.0.a1 Prupe.2G023500_v2.0.a1 Prupe.2G023600_v2.0.a1 Prupe.2G028000_v2.0.a1 Prupe.2G030200_v2.0.a1 Prupe.2G067600_v2.0.a1 Prupe.8G117900_v2.0.a1
pyrus_communis pycom02g26350 pycom03g03270 pycom07g02370 pycom11g00750 pycom11g00790 pycom11g02340 pycom11g02370 pycom11g02380 pycom11g02390 pycom11g02410 pycom11g02460 pycom11g02470 pycom11g02500 pycom11g02510 pycom11g02520 pycom11g02530 pycom11g02580 pycom11g02590 pycom11g02680 pycom11g02710 pycom11g02720 pycom11g02730 pycom11g02750 pycom11g02760 pycom11g02770 pycom11g03690 pycom13g25120 pycom13g25130 pycom13g25140 pycom13g25170 pycom13g25180 pycom13g25190 pycom13g25210
rosa_chinensis RchiOBHm_Chr1g0315001 RchiOBHm_Chr1g0315411 RchiOBHm_Chr1g0317951 RchiOBHm_Chr1g0319741 RchiOBHm_Chr1g0319841 RchiOBHm_Chr1g0319911 RchiOBHm_Chr1g0319991 RchiOBHm_Chr1g0320001 RchiOBHm_Chr1g0320021 RchiOBHm_Chr1g0320081 RchiOBHm_Chr1g0320111 RchiOBHm_Chr1g0320131 RchiOBHm_Chr1g0320161 RchiOBHm_Chr1g0320171 RchiOBHm_Chr1g0320241 RchiOBHm_Chr1g0320281 RchiOBHm_Chr1g0320411 RchiOBHm_Chr1g0320461 RchiOBHm_Chr1g0320551 RchiOBHm_Chr1g0320581 RchiOBHm_Chr1g0320661 RchiOBHm_Chr1g0320891 RchiOBHm_Chr1g0320971 RchiOBHm_Chr1g0321021 RchiOBHm_Chr1g0321031 RchiOBHm_Chr1g0321091 RchiOBHm_Chr1g0321351 RchiOBHm_Chr1g0321481 RchiOBHm_Chr1g0321491 RchiOBHm_Chr1g0327521 RchiOBHm_Chr1g0328061 RchiOBHm_Chr1g0334991 RchiOBHm_Chr1g0373781 RchiOBHm_Chr1g0373891 RchiOBHm_Chr1g0374841 RchiOBHm_Chr2g0131111 RchiOBHm_Chr2g0131121 RchiOBHm_Chr4g0408901 RchiOBHm_Chr5g0041691 RchiOBHm_Chr7g0237021
rosa_laevigata RLG00000019168 RLG00000030456 RLG00000030460 RLG00000030571
rosa_multiflora Rmu_co7963468.1_g000001 Rmu_co7991248.1_g000001 Rmu_co8195256.1_g000001 Rmu_co8312199.1_g000001 Rmu_co8349215.1_g000001 Rmu_co8351041.1_g000001 Rmu_co8422719.1_g000001 Rmu_co8450711.1_g000001 Rmu_co8465555.1_g000001 Rmu_co8489965.1_g000001 Rmu_sc0000087.1_g000014 Rmu_sc0000272.1_g000015 Rmu_sc0000724.1_g000006 Rmu_sc0000724.1_g000021 Rmu_sc0000724.1_g000022 Rmu_sc0000861.1_g000024 Rmu_sc0001049.1_g000006 Rmu_sc0001049.1_g000007 Rmu_sc0001512.1_g000001 Rmu_sc0002022.1_g000004 Rmu_sc0002063.1_g000011 Rmu_sc0002131.1_g000024 Rmu_sc0002337.1_g000012 Rmu_sc0002341.1_g000005 Rmu_sc0002539.1_g000117 Rmu_sc0002745.1_g000005 Rmu_sc0002745.1_g000006 Rmu_sc0003145.1_g000002 Rmu_sc0003199.1_g000007 Rmu_sc0003270.1_g000039 Rmu_sc0003270.1_g000040 Rmu_sc0003423.1_g000001 Rmu_sc0003423.1_g000002 Rmu_sc0003629.1_g000067 Rmu_sc0004039.1_g000002 Rmu_sc0004555.1_g000001 Rmu_sc0004555.1_g000005 Rmu_sc0004555.1_g000006 Rmu_sc0004947.1_g000025 Rmu_sc0004947.1_g000026 Rmu_sc0005255.1_g000025 Rmu_sc0007977.1_g000016 Rmu_sc0008752.1_g000005 Rmu_sc0009236.1_g000004 Rmu_sc0009236.1_g000008 Rmu_sc0009236.1_g000009 Rmu_sc0009236.1_g000010 Rmu_sc0011424.1_g000036 Rmu_sc0013413.1_g000001 Rmu_sc0013735.1_g000002 Rmu_sc0015304.1_g000002 Rmu_sc0015304.1_g000003 Rmu_sc0015585.1_g000001 Rmu_sc0018410.1_g000001 Rmu_sc0022723.1_g000001 Rmu_sc0022723.1_g000002 Rmu_sc0022724.1_g000001 Rmu_sc0023430.1_g000001 Rmu_sc0026053.1_g000001 Rmu_sc0026429.1_g000002 Rmu_sc0026647.1_g000001 Rmu_sc0031359.1_g000001 Rmu_ssc0000042.1_g000040 Rmu_ssc0000081.1_g000001 Rmu_ssc0000300.1_g000011
rosa_roxburghii Rroxscaffold_160G00433620 Rroxscaffold_160G00433990 Rroxscaffold_1G00038820 Rroxscaffold_2G00113190 Rroxscaffold_4G00283240 Rroxscaffold_4G00283930 Rroxscaffold_4G00284010 Rroxscaffold_4G00322600 Rroxscaffold_4G00327710 Rroxscaffold_4G00328100 Rroxscaffold_4G00328130 Rroxscaffold_4G00331590 Rroxscaffold_5G00353280
rosa_rugosa Rorug01G0004200 Rorug01G0018800 Rorug01G0018900 Rorug01G0029900 Rorug01G0030000 Rorug01G0030000 Rorug01G0030000 Rorug01G0030200 Rorug01G0030300 Rorug01G0030800 Rorug01G0032400 Rorug01G0032900 Rorug01G0055800 Rorug01G0067600 Rorug01G0067700 Rorug01G0067800 Rorug01G0067900 Rorug01G0068000 Rorug01G0379500 Rorug01G0379600 Rorug01G0379600 Rorug01G0385200 Rorug01G0385300 Rorug02G0295100 Rorug04G0088500 Rorug04G0088600 Rorug05G0194900 Rorug07G0301400
rosa_samantha Rh1AG014800 Rh1AG015200 Rh1AG030500 Rh1AG041800 Rh1AG042300 Rh1AG042700 Rh1AG042800 Rh1AG042900 Rh1AG045000 Rh1AG085100 Rh1AG085200 Rh1AG388600 Rh1AG396700 Rh1AG396900 Rh1BG007300 Rh1BG039200 Rh1BG039600 Rh1BG042800 Rh1BG067300 Rh1BG109700 Rh1BG109900 Rh1BG354000 Rh1CG043800 Rh1CG044400 Rh1DG008600 Rh1DG022900 Rh1DG023400 Rh1DG023600 Rh1DG023900 Rh1DG024100 Rh1DG024400 Rh1DG024500 Rh1DG025500 Rh1DG025700 Rh1DG026500 Rh1DG026800 Rh1DG038900 Rh1DG048800 Rh1DG049300 Rh1DG051700 Rh1DG052000 Rh1DG146200 Rh1DG383500 Rh2BG354900 Rh2CG333600 Rh4BG149600 Rh4BG149700 Rh4CG160600
rosa_wichuraiana Rw0G001100 Rw0G001130 Rw0G001180 Rw0G012580 Rw1G003480 Rw1G003540 Rw1G003600 Rw1G003640 Rw1G003670 Rw1G003750 Rw1G003940 Rw1G006650 Rw1G034550 Rw1G034560 Rw1G034650 Rw1G034660 Rw1G035170 Rw1G035190 Rw1G037060 Rw2G028210 Rw4G012540 Rw5G026370 Rw7G037900

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 2025
Acc65I GGTACC 1 cut(s) 1137
AccB1I GGYRCC 2 cut(s) 1102, 1137
AccBSI CCGCTC 1 cut(s) 1530
AccI GTMKAC 1 cut(s) 121
AciI CCGC 3 cut(s) 973, 1066, 1530
AcoI YGGCCR 3 cut(s) 1714, 1755, 2332
AcsI RAATTY 7 cut(s) 397, 641, 1108, 1270, 1622, 1884, 2250
AcuI CTGAAG 1 cut(s) 1724
AcvI CACGTG 1 cut(s) 275
AfaI GTAC 4 cut(s) 561, 1061, 1139, 2348
AfiI CCNNNNNNNGG 3 cut(s) 236, 1712, 1903
AflII CTTAAG 2 cut(s) 410, 1586
AflIII ACRYGT 4 cut(s) 194, 272, 1166, 2210
AjuI GAANNNNNNNTTGG 4 cut(s) 648, 680, 1710, 1742
AleI CACNNNNGTG 1 cut(s) 2076
Alw21I GWGCWC 3 cut(s) 1074, 2073, 2317
Alw26I GTCTC 2 cut(s) 941, 1120
Alw44I GTGCAC 1 cut(s) 2069
AlwNI CAGNNNCTG 1 cut(s) 38
Ama87I CYCGRG 1 cut(s) 775
AoxI GGCC 5 cut(s) 95, 389, 1714, 1755, 2332
ApaLI GTGCAC 1 cut(s) 2069
ApeKI GCWGC 7 cut(s) 370, 452, 836, 839, 1797, 2239, 2242
ApoI RAATTY 7 cut(s) 397, 641, 1108, 1270, 1622, 1884, 2250
ArsI GACNNNNNNTTYG 4 cut(s) 626, 658, 722, 754
AseI ATTAAT 2 cut(s) 659, 1160
Asp700I GAANNNNTTC 1 cut(s) 1884
Asp718I GGTACC 1 cut(s) 1137
AsuHPI GGTGA 5 cut(s) 277, 326, 582, 740, 830
AsuII TTCGAA 1 cut(s) 1620
AvaI CYCGRG 1 cut(s) 775
AxyI CCTNAGG 1 cut(s) 1826
BaeGI GKGCMC 1 cut(s) 2073
BalI TGGCCA 3 cut(s) 1716, 1757, 2334
BanI GGYRCC 2 cut(s) 1102, 1137
BanII GRGCYC 1 cut(s) 307
BbrPI CACGTG 1 cut(s) 275
BbsI GAAGAC 2 cut(s) 1244, 1481
Bbv12I GWGCWC 3 cut(s) 1074, 2073, 2317
BbvI GCAGC 7 cut(s) 382, 439, 823, 826, 1809, 2226, 2254
BccI CCATC 6 cut(s) 292, 667, 825, 923, 1607, 1925
BceAI ACGGC 1 cut(s) 1494
BcgI CGANNNNNNTGC 2 cut(s) 130, 164
BclI TGATCA 1 cut(s) 2043
BcoDI GTCTC 2 cut(s) 941, 1120
BfaI CTAG 1 cut(s) 2327
BfmI CTRYAG 2 cut(s) 840, 2240
BfrI CTTAAG 2 cut(s) 410, 1586
BisI GCNGC 8 cut(s) 371, 453, 837, 840, 1531, 1798, 2240, 2243
BlsI GCNGC 8 cut(s) 372, 454, 838, 841, 1532, 1799, 2241, 2244
BmcAI AGTACT 2 cut(s) 561, 1061
BmeT110I CYCGRG 1 cut(s) 775
BmiI GGNNCC 4 cut(s) 244, 304, 1104, 1139
BmrI ACTGGG 1 cut(s) 551
BmsI GCATC 3 cut(s) 1394, 1423, 1459
BmuI ACTGGG 1 cut(s) 551
BpiI GAAGAC 2 cut(s) 1244, 1481
BpmI CTGGAG 3 cut(s) 208, 978, 2120
Bpu14I TTCGAA 1 cut(s) 1620
BpuEI CTTGAG 2 cut(s) 710, 1450
BsaAI YACGTR 1 cut(s) 275
BsaJI CCNNGG 7 cut(s) 235, 246, 774, 1000, 1098, 1921, 2050
BsaXI ACNNNNNCTCC 4 cut(s) 181, 211, 1544, 1574
Bsc4I CCNNNNNNNGG 3 cut(s) 236, 1712, 1903
Bse118I RCCGGY 1 cut(s) 311
Bse1I ACTGG 5 cut(s) 557, 1758, 1811, 2103, 2197
Bse21I CCTNAGG 1 cut(s) 1826
Bse3DI GCAATG 3 cut(s) 388, 442, 1409
BseDI CCNNGG 7 cut(s) 235, 246, 774, 1000, 1098, 1921, 2050
BseGI GGATG 6 cut(s) 115, 678, 1474, 1642, 1917, 2046
BseLI CCNNNNNNNGG 3 cut(s) 236, 1712, 1903
BseMI GCAATG 3 cut(s) 388, 442, 1409
BseMII CTCAG 6 cut(s) 128, 577, 896, 1167, 1770, 1817
BseNI ACTGG 5 cut(s) 557, 1758, 1811, 2103, 2197
BseRI GAGGAG 2 cut(s) 255, 1698
BseSI GKGCMC 1 cut(s) 2073
BseXI GCAGC 7 cut(s) 382, 439, 823, 826, 1809, 2226, 2254
BseYI CCCAGC 1 cut(s) 307
BsgI GTGCAG 2 cut(s) 1582, 1816
BshFI GGCC 5 cut(s) 97, 391, 1716, 1757, 2334
BshNI GGYRCC 2 cut(s) 1102, 1137
BsiHKAI GWGCWC 3 cut(s) 1074, 2073, 2317
BsiHKCI CYCGRG 1 cut(s) 775
BsiSI CCGG 1 cut(s) 312
BslFI GGGAC 1 cut(s) 718
BslI CCNNNNNNNGG 3 cut(s) 236, 1712, 1903
BsmAI GTCTC 2 cut(s) 941, 1120
BsmFI GGGAC 1 cut(s) 718
BsnI GGCC 5 cut(s) 97, 391, 1716, 1757, 2334
BsoBI CYCGRG 1 cut(s) 775
Bsp119I TTCGAA 1 cut(s) 1620
Bsp1286I GDGCHC 4 cut(s) 307, 1074, 2073, 2317
Bsp143I GATC 5 cut(s) 13, 49, 147, 1144, 2043
BspACI CCGC 3 cut(s) 973, 1066, 1530
BspANI GGCC 5 cut(s) 97, 391, 1716, 1757, 2334
BspCNI CTCAG 6 cut(s) 129, 576, 897, 1168, 1771, 1818
BspLI GGNNCC 4 cut(s) 244, 304, 1104, 1139
BspMAI CTGCAG 2 cut(s) 844, 2244
BspT104I TTCGAA 1 cut(s) 1620
BspT107I GGYRCC 2 cut(s) 1102, 1137
BspTI CTTAAG 2 cut(s) 410, 1586
BsrBI CCGCTC 1 cut(s) 1530
BsrDI GCAATG 3 cut(s) 388, 442, 1409
BsrFI RCCGGY 1 cut(s) 311
BsrI ACTGG 5 cut(s) 557, 1758, 1811, 2103, 2197
BssAI RCCGGY 1 cut(s) 311
BssECI CCNNGG 7 cut(s) 235, 246, 774, 1000, 1098, 1921, 2050
BssMI GATC 5 cut(s) 13, 49, 147, 1144, 2043
BssT1I CCWWGG 2 cut(s) 246, 1921
Bst4CI ACNGT 7 cut(s) 9, 61, 788, 1137, 1407, 1694, 2054
Bst6I CTCTTC 3 cut(s) 593, 1992, 2196
BstAFI CTTAAG 2 cut(s) 410, 1586
BstBAI YACGTR 1 cut(s) 275
BstBI TTCGAA 1 cut(s) 1620
BstC8I GCNNGC 4 cut(s) 225, 971, 1190, 1802
BstDEI CTNAG 8 cut(s) 137, 563, 905, 921, 1176, 1779, 1826, 2309
BstDSI CCRYGG 3 cut(s) 235, 1000, 2050
BstF5I GGATG 6 cut(s) 115, 678, 1474, 1642, 1917, 2046
BstKTI GATC 5 cut(s) 16, 52, 150, 1147, 2046
BstMAI GTCTC 2 cut(s) 941, 1120
BstMBI GATC 5 cut(s) 13, 49, 147, 1144, 2043
BstMWI GCNNNNNNNGC 4 cut(s) 833, 1354, 1478, 1591
BstNSI RCATGY 5 cut(s) 377, 1188, 1192, 1300, 2214
BstSFI CTRYAG 2 cut(s) 840, 2240
BstSLI GKGCMC 1 cut(s) 2073
BstV1I GCAGC 7 cut(s) 382, 439, 823, 826, 1809, 2226, 2254
BstV2I GAAGAC 2 cut(s) 1244, 1481
BstXI CCANNNNNNTGG 1 cut(s) 1960
Bsu36I CCTNAGG 1 cut(s) 1826
BsuRI GGCC 5 cut(s) 97, 391, 1716, 1757, 2334
BtgI CCRYGG 3 cut(s) 235, 1000, 2050
BtsCI GGATG 6 cut(s) 115, 678, 1474, 1642, 1917, 2046
BtsIMutI CAGTG 3 cut(s) 39, 66, 1818
Cac8I GCNNGC 4 cut(s) 225, 971, 1190, 1802
CaiI CAGNNNCTG 1 cut(s) 38
Cfr10I RCCGGY 1 cut(s) 311
CseI GACGC 1 cut(s) 2234
Csp6I GTAC 4 cut(s) 560, 1060, 1138, 2347
CspCI CAANNNNNGTGG 2 cut(s) 2165, 2200
CviQI GTAC 4 cut(s) 560, 1060, 1138, 2347
DdeI CTNAG 8 cut(s) 137, 563, 905, 921, 1176, 1779, 1826, 2309
DpnI GATC 5 cut(s) 15, 51, 149, 1146, 2045
DpnII GATC 5 cut(s) 13, 49, 147, 1144, 2043
DraI TTTAAA 1 cut(s) 330
EaeI YGGCCR 3 cut(s) 1714, 1755, 2332
Eam1104I CTCTTC 3 cut(s) 593, 1992, 2196
EarI CTCTTC 3 cut(s) 593, 1992, 2196
Eco130I CCWWGG 2 cut(s) 246, 1921
Eco24I GRGCYC 1 cut(s) 307
Eco32I GATATC 1 cut(s) 724
Eco57I CTGAAG 1 cut(s) 1724
Eco72I CACGTG 1 cut(s) 275
Eco81I CCTNAGG 1 cut(s) 1826
Eco88I CYCGRG 1 cut(s) 775
EcoRV GATATC 1 cut(s) 724
EcoT14I CCWWGG 2 cut(s) 246, 1921
EcoT22I ATGCAT 3 cut(s) 807, 1190, 1904
EcoT38I GRGCYC 1 cut(s) 307
ErhI CCWWGG 2 cut(s) 246, 1921
FalI AAGNNNNNCTT 2 cut(s) 590, 622
FaqI GGGAC 1 cut(s) 718
FauI CCCGC 1 cut(s) 1059
FbaI TGATCA 1 cut(s) 2043
FblI GTMKAC 1 cut(s) 121
Fnu4HI GCNGC 8 cut(s) 371, 453, 837, 840, 1531, 1798, 2240, 2243
FokI GGATG 6 cut(s) 122, 685, 1481, 1629, 1904, 2033
FriOI GRGCYC 1 cut(s) 307
Fsp4HI GCNGC 8 cut(s) 371, 453, 837, 840, 1531, 1798, 2240, 2243
FspBI CTAG 1 cut(s) 2327
GluI GCNGC 8 cut(s) 371, 453, 837, 840, 1531, 1798, 2240, 2243
GsaI CCCAGC 1 cut(s) 311
GsuI CTGGAG 3 cut(s) 208, 978, 2120
HaeIII GGCC 5 cut(s) 97, 391, 1716, 1757, 2334
HapII CCGG 1 cut(s) 312
HgaI GACGC 1 cut(s) 2234
HincII GTYRAC 4 cut(s) 122, 1182, 1338, 2208
HindII GTYRAC 4 cut(s) 122, 1182, 1338, 2208
HindIII AAGCTT 3 cut(s) 1583, 1910, 2171
HinfI GANTC 8 cut(s) 206, 334, 895, 1178, 1339, 1698, 1964, 2282
HpaII CCGG 1 cut(s) 312
HphI GGTGA 5 cut(s) 277, 326, 582, 740, 830
Hpy166II GTNNAC 5 cut(s) 122, 1182, 1338, 2071, 2208
Hpy188III TCNNGA 5 cut(s) 128, 187, 957, 1825, 2303
Hpy8I GTNNAC 5 cut(s) 122, 1182, 1338, 2071, 2208
Hpy99I CGWCG 1 cut(s) 2250
HpyCH4III ACNGT 7 cut(s) 9, 61, 788, 1137, 1407, 1694, 2054
HpyCH4IV ACGT 6 cut(s) 194, 274, 478, 1166, 1208, 1276
HpyF10VI GCNNNNNNNGC 4 cut(s) 833, 1354, 1478, 1591
HpyF3I CTNAG 8 cut(s) 137, 563, 905, 921, 1176, 1779, 1826, 2309
HpySE526I ACGT 6 cut(s) 194, 274, 478, 1166, 1208, 1276
KpnI GGTACC 1 cut(s) 1141
Ksp22I TGATCA 1 cut(s) 2043
Kzo9I GATC 5 cut(s) 13, 49, 147, 1144, 2043
LmnI GCTCC 6 cut(s) 242, 302, 745, 959, 1527, 1591
Lsp1109I GCAGC 7 cut(s) 382, 439, 823, 826, 1809, 2226, 2254
LweI GCATC 3 cut(s) 1394, 1423, 1459
MaeI CTAG 1 cut(s) 2327
MaeII ACGT 6 cut(s) 194, 274, 478, 1166, 1208, 1276
MaeIII GTNAC 8 cut(s) 61, 85, 265, 424, 728, 908, 1423, 2094
MalI GATC 5 cut(s) 15, 51, 149, 1146, 2045
MbiI CCGCTC 1 cut(s) 1530
MboI GATC 5 cut(s) 13, 49, 147, 1144, 2043
MfeI CAATTG 2 cut(s) 1052, 1517
MhlI GDGCHC 4 cut(s) 307, 1074, 2073, 2317
MlsI TGGCCA 3 cut(s) 1716, 1757, 2334
MluNI TGGCCA 3 cut(s) 1716, 1757, 2334
MlyI GAGTC 5 cut(s) 328, 889, 1187, 1333, 2276
MmeI TCCRAC 3 cut(s) 1417, 1530, 1797
Mox20I TGGCCA 3 cut(s) 1716, 1757, 2334
Mph1103I ATGCAT 3 cut(s) 807, 1190, 1904
MroXI GAANNNNTTC 1 cut(s) 1884
MscI TGGCCA 3 cut(s) 1716, 1757, 2334
MseI TTAA 8 cut(s) 78, 329, 411, 659, 1160, 1211, 1587, 2085
MslI CAYNNNNRTG 3 cut(s) 1419, 2076, 2215
Msp20I TGGCCA 3 cut(s) 1716, 1757, 2334
MspA1I CMGCKG 1 cut(s) 1978
MspCI CTTAAG 2 cut(s) 410, 1586
MspI CCGG 1 cut(s) 312
MunI CAATTG 2 cut(s) 1052, 1517
MwoI GCNNNNNNNGC 4 cut(s) 833, 1354, 1478, 1591
NdeII GATC 5 cut(s) 13, 49, 147, 1144, 2043
NlaIV GGNNCC 4 cut(s) 244, 304, 1104, 1139
NmeAIII GCCGAG 1 cut(s) 73
NmuCI GTSAC 4 cut(s) 61, 265, 728, 1423
NsiI ATGCAT 3 cut(s) 807, 1190, 1904
NspI RCATGY 5 cut(s) 377, 1188, 1192, 1300, 2214
NspV TTCGAA 1 cut(s) 1620
OliI CACNNNNGTG 1 cut(s) 2076
PaeI GCATGC 1 cut(s) 1192
PciI ACATGT 1 cut(s) 2210
PdmI GAANNNNTTC 1 cut(s) 1884
PfeI GAWTC 3 cut(s) 206, 1698, 1964
PkrI GCNGC 8 cut(s) 372, 454, 838, 841, 1532, 1799, 2241, 2244
PleI GAGTC 5 cut(s) 328, 889, 1186, 1333, 2276
PmaCI CACGTG 1 cut(s) 275
PmlI CACGTG 1 cut(s) 275
PpsI GAGTC 5 cut(s) 328, 889, 1186, 1333, 2276
Ppu21I YACGTR 1 cut(s) 275
PscI ACATGT 1 cut(s) 2210
PshBI ATTAAT 2 cut(s) 659, 1160
PsiI TTATAA 1 cut(s) 2025
PspCI CACGTG 1 cut(s) 275
PspFI CCCAGC 1 cut(s) 307
PspN4I GGNNCC 4 cut(s) 244, 304, 1104, 1139
PstI CTGCAG 2 cut(s) 844, 2244
PstNI CAGNNNCTG 1 cut(s) 38
PvuII CAGCTG 1 cut(s) 1978
RsaI GTAC 4 cut(s) 561, 1061, 1139, 2348
RsaNI GTAC 4 cut(s) 560, 1060, 1138, 2347
RseI CAYNNNNRTG 3 cut(s) 1419, 2076, 2215
SalI GTCGAC 1 cut(s) 120
SaqAI TTAA 8 cut(s) 78, 329, 411, 659, 1160, 1211, 1587, 2085
SatI GCNGC 8 cut(s) 371, 453, 837, 840, 1531, 1798, 2240, 2243
Sau3AI GATC 5 cut(s) 13, 49, 147, 1144, 2043
ScaI AGTACT 2 cut(s) 561, 1061
SchI GAGTC 5 cut(s) 328, 889, 1187, 1333, 2276
SduI GDGCHC 4 cut(s) 307, 1074, 2073, 2317
SfaNI GCATC 3 cut(s) 1394, 1423, 1459
SfcI CTRYAG 2 cut(s) 840, 2240
SfuI TTCGAA 1 cut(s) 1620
SmiMI CAYNNNNRTG 3 cut(s) 1419, 2076, 2215
SmlI CTYRAG 5 cut(s) 17, 410, 689, 1429, 1586
SmoI CTYRAG 5 cut(s) 17, 410, 689, 1429, 1586
SphI GCATGC 1 cut(s) 1192
SsiI CCGC 3 cut(s) 973, 1066, 1530
SspI AATATT 4 cut(s) 737, 1215, 2122, 2260
SspMI CTAG 1 cut(s) 2327
StyI CCWWGG 2 cut(s) 246, 1921
TaaI ACNGT 7 cut(s) 9, 61, 788, 1137, 1407, 1694, 2054
TaiI ACGT 6 cut(s) 197, 277, 481, 1169, 1211, 1279
TaqI TCGA 8 cut(s) 48, 121, 402, 1620, 1696, 1888, 2139, 2248
TaqII GACCGA 2 cut(s) 747, 1112
TatI WGTACW 3 cut(s) 559, 1059, 2346
TauI GCSGC 1 cut(s) 1533
TfiI GAWTC 3 cut(s) 206, 1698, 1964
Tru1I TTAA 8 cut(s) 78, 329, 411, 659, 1160, 1211, 1587, 2085
Tru9I TTAA 8 cut(s) 78, 329, 411, 659, 1160, 1211, 1587, 2085
TscAI CASTG 3 cut(s) 39, 66, 1818
TseFI GTSAC 4 cut(s) 61, 265, 728, 1423
TseI GCWGC 7 cut(s) 370, 452, 836, 839, 1797, 2239, 2242
Tsp45I GTSAC 4 cut(s) 61, 265, 728, 1423
TspGWI ACGGA 2 cut(s) 224, 1102
TspRI CASTG 3 cut(s) 39, 66, 1818
Vha464I CTTAAG 2 cut(s) 410, 1586
VneI GTGCAC 1 cut(s) 2069
VspI ATTAAT 2 cut(s) 659, 1160
XapI RAATTY 7 cut(s) 397, 641, 1108, 1270, 1622, 1884, 2250
XceI RCATGY 5 cut(s) 377, 1188, 1192, 1300, 2214
XmiI GTMKAC 1 cut(s) 121
XmnI GAANNNNTTC 1 cut(s) 1884
XspI CTAG 1 cut(s) 2327
ZrmI AGTACT 2 cut(s) 561, 1061
Zsp2I ATGCAT 3 cut(s) 807, 1190, 1904
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.