MD11G1034100.v1.1

disease resistance

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr11
OG0000070
Physical Location & Seq
Reverse (-)
2991985 .. 2993361
1377 bp
Loading structure...
UTR
Exon/CDS
Intron
MD11G1034100.v1.1.491

Sequence Viewer

Length: 1377 bp
ATGGCACTGGGAGAGATTTTTCTTGCGGCATTTCTACCGTTGCTGCTCGACAGGTTGACCGCTCGCGAGATTCTCAACTACTTTGGAAACTTCCGGGGCGTCAGAAAGAAGCTGGAGAAGTGGAGGACCACGTTATCTACAATCGGAGTGGTGGTCAGTGATGCCGAGGAAAGGCAACTGACTGAGGGTGCTGTCAAACTGTGGCCCGATGATCTCAGAGATTTGGCTTATGATATCAAAGACATGTTGGACAAATTTGCCACACAAATGTTGAAGCGCATGATAGAGGGACGTGAACAAGCCAACACAAGCAACAAGATATGGAGATCATTTTATAAAGTTAAATTGAGGTTTGATATGAACTCCGAAATGAAGAAGATTAGAGAGTGGTTGCAAGACATATCTGTACGGAAAGAAAAGTTTGGCTTGAAAGATACTGGGACGTCTGATAAGGAATCACGAAGTTTACAAAGTGCAGGCGTGTTAGATGAAAAGCTTGTTGTTGGAAGAGATGATGACAAAAGGGAGATTATCGAATTGTTGTCAAGAGAATGCGAGCATGCAGGTACTGTCAATTTTGGTGTAGTAGCTATAGTTGGGATGCACGGAGTCGGGAAGACGACACTTGCTCAACTTGTATTCAACCACAAAGATGATGCCATGAAGGAGTTTGAGCCTAAGGTGTGGGTATCTGTGTCTGATGACTTCGATCTTGTGCGAGTGACTAAAGCAATTCTTGAATCAATCACATCCCGACCTGTTGAAGTCGAGGAGTTTAGTAAAATGCAGCATGATTTGAGTGAGCAGTTAAGAGGAAAAAAGTTTTTAATCGTTTTAGATGATATTTGGAACAAAGGTGACCATGATCTATACGATCTCTGGACAAGACTTCAATCCCCTTTTGGCGTTGGAGCTGGAGGAAGTAAGATACTTGTGACAACCCGTGATGTGAATGTTGCAAAGATTATGGGAGCCGCTGGAGTCCATAATTTGGAGTGCATGGGAGATGATGATTGTTTGGAAATATTTGAGCGACATGCATTCGGGGAACTTAACGATGGAAAACCAGTAAATTATGAGTTAATTCGAAGAAAAATTGTCGAAAAATGTCGTGGATTACAATTAGCTGCAAGGACTCTCAGTGGCCTTTTACGTTGCAAAGAAAAAGATGAGTGGGAAGAAATATTGAATAACAAATTGTGGAATATAGCAGATAAGAGTGGCATTCTCCCCATACTAAAGTTTAGCTATCACTATCTTCCATCAAATTTGAAGAGGTGTTTTGCGTATTGGTCAATACTTCCAAACAACTATGAATTTAGGGAGAAGCAACTCGTCCTTTTGTGGATGGCAGAGGGTTTGATTCAACTTTTGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
NB-ARC

Protein Analysis

459

Amino Acids

52.68

Weight (kDa)

6.51

Isoelectric Point (pI)

45.0

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Rx_N PF18052 20 - 99 1.9e-19 Rx N-terminal domain
NB-ARC PF00931 171 - 348 1.5e-37 NB-ARC domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000070)

Species Orthologous Gene IDs
fragaria_vesca FvH4_7g00360 FvH4_7g00850 FvH4_7g02400 FvH4_7g02430 FvH4_7g02450 FvH4_7g25671 FvH4_7g25680 FvH4_7g25683 FvH4_7g26980 FvH4_7g27330 FvH4_7g27355 FvH4_7g27610 FvH4_7g27642 FvH4_7g27890 FvH4_7g27891 FvH4_7g27891 FvH4_7g27891 FvH4_7g28110 FvH4_7g28390
malus_domestica MD00G1070800.v1.1 MD00G1168000.v1.1 MD00G1168300.v1.1 MD00G1168700.v1.1 MD02G1293100.v1.1 MD02G1293200.v1.1 MD02G1314300.v1.1 MD03G1009000.v1.1 MD03G1009400.v1.1 MD03G1042300.v1.1 MD03G1042400.v1.1 MD07G1033600.v1.1 MD07G1033700.v1.1 MD07G1033900.v1.1 MD11G1011400.v1.1 MD11G1011700.v1.1 MD11G1029800.v1.1 MD11G1029900.v1.1 MD11G1030300.v1.1 MD11G1030400.v1.1 MD11G1030500.v1.1 MD11G1031300.v1.1 MD11G1031600.v1.1 MD11G1032000.v1.1 MD11G1033200.v1.1 MD11G1033600.v1.1 MD11G1033800.v1.1 MD11G1033900.v1.1 MD11G1034100.v1.1 MD11G1034400.v1.1 MD11G1040600.v1.1 MD11G1041100.v1.1 MD11G1043100.v1.1 MD11G1043500.v1.1 MD11G1044500.v1.1 MD11G1045100.v1.1 MD11G1045600.v1.1
prunus_persica Prupe.2G022400_v2.0.a1 Prupe.2G022400_v2.0.a1 Prupe.2G022400_v2.0.a1 Prupe.2G022500_v2.0.a1 Prupe.2G022500_v2.0.a1 Prupe.2G022900_v2.0.a1 Prupe.2G023500_v2.0.a1 Prupe.2G023500_v2.0.a1 Prupe.2G023500_v2.0.a1 Prupe.2G023500_v2.0.a1 Prupe.2G023500_v2.0.a1 Prupe.2G023500_v2.0.a1 Prupe.2G023600_v2.0.a1 Prupe.2G028000_v2.0.a1 Prupe.2G030200_v2.0.a1 Prupe.2G067600_v2.0.a1 Prupe.8G117900_v2.0.a1
pyrus_communis pycom02g26350 pycom03g03270 pycom07g02370 pycom11g00750 pycom11g00790 pycom11g02340 pycom11g02370 pycom11g02380 pycom11g02390 pycom11g02410 pycom11g02460 pycom11g02470 pycom11g02500 pycom11g02510 pycom11g02520 pycom11g02530 pycom11g02580 pycom11g02590 pycom11g02680 pycom11g02710 pycom11g02720 pycom11g02730 pycom11g02750 pycom11g02760 pycom11g02770 pycom11g03690 pycom13g25120 pycom13g25130 pycom13g25140 pycom13g25170 pycom13g25180 pycom13g25190 pycom13g25210
rosa_chinensis RchiOBHm_Chr1g0315001 RchiOBHm_Chr1g0315411 RchiOBHm_Chr1g0317951 RchiOBHm_Chr1g0319741 RchiOBHm_Chr1g0319841 RchiOBHm_Chr1g0319911 RchiOBHm_Chr1g0319991 RchiOBHm_Chr1g0320001 RchiOBHm_Chr1g0320021 RchiOBHm_Chr1g0320081 RchiOBHm_Chr1g0320111 RchiOBHm_Chr1g0320131 RchiOBHm_Chr1g0320161 RchiOBHm_Chr1g0320171 RchiOBHm_Chr1g0320241 RchiOBHm_Chr1g0320281 RchiOBHm_Chr1g0320411 RchiOBHm_Chr1g0320461 RchiOBHm_Chr1g0320551 RchiOBHm_Chr1g0320581 RchiOBHm_Chr1g0320661 RchiOBHm_Chr1g0320891 RchiOBHm_Chr1g0320971 RchiOBHm_Chr1g0321021 RchiOBHm_Chr1g0321031 RchiOBHm_Chr1g0321091 RchiOBHm_Chr1g0321351 RchiOBHm_Chr1g0321481 RchiOBHm_Chr1g0321491 RchiOBHm_Chr1g0327521 RchiOBHm_Chr1g0328061 RchiOBHm_Chr1g0334991 RchiOBHm_Chr1g0373781 RchiOBHm_Chr1g0373891 RchiOBHm_Chr1g0374841 RchiOBHm_Chr2g0131111 RchiOBHm_Chr2g0131121 RchiOBHm_Chr4g0408901 RchiOBHm_Chr5g0041691 RchiOBHm_Chr7g0237021
rosa_laevigata RLG00000019168 RLG00000030456 RLG00000030460 RLG00000030571
rosa_multiflora Rmu_co7963468.1_g000001 Rmu_co7991248.1_g000001 Rmu_co8195256.1_g000001 Rmu_co8312199.1_g000001 Rmu_co8349215.1_g000001 Rmu_co8351041.1_g000001 Rmu_co8422719.1_g000001 Rmu_co8450711.1_g000001 Rmu_co8465555.1_g000001 Rmu_co8489965.1_g000001 Rmu_sc0000087.1_g000014 Rmu_sc0000272.1_g000015 Rmu_sc0000724.1_g000006 Rmu_sc0000724.1_g000021 Rmu_sc0000724.1_g000022 Rmu_sc0000861.1_g000024 Rmu_sc0001049.1_g000006 Rmu_sc0001049.1_g000007 Rmu_sc0001512.1_g000001 Rmu_sc0002022.1_g000004 Rmu_sc0002063.1_g000011 Rmu_sc0002131.1_g000024 Rmu_sc0002337.1_g000012 Rmu_sc0002341.1_g000005 Rmu_sc0002539.1_g000117 Rmu_sc0002745.1_g000005 Rmu_sc0002745.1_g000006 Rmu_sc0003145.1_g000002 Rmu_sc0003199.1_g000007 Rmu_sc0003270.1_g000039 Rmu_sc0003270.1_g000040 Rmu_sc0003423.1_g000001 Rmu_sc0003423.1_g000002 Rmu_sc0003629.1_g000067 Rmu_sc0004039.1_g000002 Rmu_sc0004555.1_g000001 Rmu_sc0004555.1_g000005 Rmu_sc0004555.1_g000006 Rmu_sc0004947.1_g000025 Rmu_sc0004947.1_g000026 Rmu_sc0005255.1_g000025 Rmu_sc0007977.1_g000016 Rmu_sc0008752.1_g000005 Rmu_sc0009236.1_g000004 Rmu_sc0009236.1_g000008 Rmu_sc0009236.1_g000009 Rmu_sc0009236.1_g000010 Rmu_sc0011424.1_g000036 Rmu_sc0013413.1_g000001 Rmu_sc0013735.1_g000002 Rmu_sc0015304.1_g000002 Rmu_sc0015304.1_g000003 Rmu_sc0015585.1_g000001 Rmu_sc0018410.1_g000001 Rmu_sc0022723.1_g000001 Rmu_sc0022723.1_g000002 Rmu_sc0022724.1_g000001 Rmu_sc0023430.1_g000001 Rmu_sc0026053.1_g000001 Rmu_sc0026429.1_g000002 Rmu_sc0026647.1_g000001 Rmu_sc0031359.1_g000001 Rmu_ssc0000042.1_g000040 Rmu_ssc0000081.1_g000001 Rmu_ssc0000300.1_g000011
rosa_roxburghii Rroxscaffold_160G00433620 Rroxscaffold_160G00433990 Rroxscaffold_1G00038820 Rroxscaffold_2G00113190 Rroxscaffold_4G00283240 Rroxscaffold_4G00283930 Rroxscaffold_4G00284010 Rroxscaffold_4G00322600 Rroxscaffold_4G00327710 Rroxscaffold_4G00328100 Rroxscaffold_4G00328130 Rroxscaffold_4G00331590 Rroxscaffold_5G00353280
rosa_rugosa Rorug01G0004200 Rorug01G0018800 Rorug01G0018900 Rorug01G0029900 Rorug01G0030000 Rorug01G0030000 Rorug01G0030000 Rorug01G0030200 Rorug01G0030300 Rorug01G0030800 Rorug01G0032400 Rorug01G0032900 Rorug01G0055800 Rorug01G0067600 Rorug01G0067700 Rorug01G0067800 Rorug01G0067900 Rorug01G0068000 Rorug01G0379500 Rorug01G0379600 Rorug01G0379600 Rorug01G0385200 Rorug01G0385300 Rorug02G0295100 Rorug04G0088500 Rorug04G0088600 Rorug05G0194900 Rorug07G0301400
rosa_samantha Rh1AG014800 Rh1AG015200 Rh1AG030500 Rh1AG041800 Rh1AG042300 Rh1AG042700 Rh1AG042800 Rh1AG042900 Rh1AG045000 Rh1AG085100 Rh1AG085200 Rh1AG388600 Rh1AG396700 Rh1AG396900 Rh1BG007300 Rh1BG039200 Rh1BG039600 Rh1BG042800 Rh1BG067300 Rh1BG109700 Rh1BG109900 Rh1BG354000 Rh1CG043800 Rh1CG044400 Rh1DG008600 Rh1DG022900 Rh1DG023400 Rh1DG023600 Rh1DG023900 Rh1DG024100 Rh1DG024400 Rh1DG024500 Rh1DG025500 Rh1DG025700 Rh1DG026500 Rh1DG026800 Rh1DG038900 Rh1DG048800 Rh1DG049300 Rh1DG051700 Rh1DG052000 Rh1DG146200 Rh1DG383500 Rh2BG354900 Rh2CG333600 Rh4BG149600 Rh4BG149700 Rh4CG160600
rosa_wichuraiana Rw0G001100 Rw0G001130 Rw0G001180 Rw0G012580 Rw1G003480 Rw1G003540 Rw1G003600 Rw1G003640 Rw1G003670 Rw1G003750 Rw1G003940 Rw1G006650 Rw1G034550 Rw1G034560 Rw1G034650 Rw1G034660 Rw1G035170 Rw1G035190 Rw1G037060 Rw2G028210 Rw4G012540 Rw5G026370 Rw7G037900

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 336
AatII GACGTC 1 cut(s) 446
Acc36I ACCTGC 1 cut(s) 554
AccB7I CCANNNNNTGG 1 cut(s) 991
AccBSI CCGCTC 1 cut(s) 62
AccII CGCG 1 cut(s) 66
AciI CCGC 3 cut(s) 26, 60, 975
AcsI RAATTY 3 cut(s) 254, 1267, 1316
AcyI GRCGYC 2 cut(s) 99, 443
AfaI GTAC 2 cut(s) 408, 568
AfiI CCNNNNNNNGG 2 cut(s) 171, 991
AflIII ACRYGT 1 cut(s) 243
AgsI TTSAA 9 cut(s) 274, 430, 643, 740, 764, 893, 1189, 1273, 1367
AjiI CACGTC 1 cut(s) 293
AluBI AGCT 6 cut(s) 112, 496, 590, 914, 1127, 1248
AluI AGCT 6 cut(s) 112, 496, 590, 914, 1127, 1248
AlwNI CAGNNNCTG 1 cut(s) 569
AoxI GGCC 2 cut(s) 203, 1144
ApeKI GCWGC 3 cut(s) 43, 787, 1127
ApoI RAATTY 3 cut(s) 254, 1267, 1316
AspLEI GCGC 1 cut(s) 279
AspS9I GGNCC 2 cut(s) 126, 204
AsuC2I CCSGG 1 cut(s) 95
AsuHPI GGTGA 1 cut(s) 869
AsuII TTCGAA 1 cut(s) 1087
AvaII GGWCC 1 cut(s) 126
AxyI CCTNAGG 1 cut(s) 678
BbsI GAAGAC 1 cut(s) 623
BbvI GCAGC 3 cut(s) 30, 799, 1114
BccI CCATC 3 cut(s) 1052, 1270, 1342
BcnI CCSGG 1 cut(s) 95
BfmI CTRYAG 1 cut(s) 591
BfuAI ACCTGC 1 cut(s) 554
BisI GCNGC 5 cut(s) 27, 44, 788, 975, 1128
BlsI GCNGC 5 cut(s) 28, 45, 789, 976, 1129
Bme1390I CCNGG 1 cut(s) 95
Bme18I GGWCC 1 cut(s) 126
BmgBI CACGTC 1 cut(s) 293
BmgT120I GGNCC 2 cut(s) 126, 204
BmiI GGNNCC 1 cut(s) 973
BmrFI CCNGG 1 cut(s) 95
BmrI ACTGGG 2 cut(s) 17, 447
BmsI GCATC 3 cut(s) 151, 591, 646
BmuI ACTGGG 2 cut(s) 17, 447
BpiI GAAGAC 1 cut(s) 623
BpmI CTGGAG 3 cut(s) 134, 936, 999
Bpu14I TTCGAA 1 cut(s) 1087
BpuMI CCSGG 1 cut(s) 95
BsaHI GRCGYC 2 cut(s) 99, 443
BsaJI CCNNGG 2 cut(s) 94, 165
BsaXI ACNNNNNCTCC 2 cut(s) 138, 168
Bsc4I CCNNNNNNNGG 2 cut(s) 171, 991
Bse1I ACTGG 3 cut(s) 12, 442, 1067
Bse21I CCTNAGG 1 cut(s) 678
BseDI CCNNGG 2 cut(s) 94, 165
BseGI GGATG 3 cut(s) 606, 749, 1353
BseLI CCNNNNNNNGG 2 cut(s) 171, 991
BseMII CTCAG 3 cut(s) 174, 229, 1153
BseNI ACTGG 3 cut(s) 12, 442, 1067
BseRI GAGGAG 1 cut(s) 785
BseXI GCAGC 3 cut(s) 30, 799, 1114
BsgI GTGCAG 1 cut(s) 495
Bsh1236I CGCG 1 cut(s) 66
BshFI GGCC 2 cut(s) 205, 1146
BsiSI CCGG 1 cut(s) 94
BslFI GGGAC 2 cut(s) 303, 454
BslI CCNNNNNNNGG 2 cut(s) 171, 991
BsmFI GGGAC 2 cut(s) 303, 454
BsmI GAATGC 3 cut(s) 557, 1040, 1224
BsnI GGCC 2 cut(s) 205, 1146
Bsp119I TTCGAA 1 cut(s) 1087
Bsp143I GATC 5 cut(s) 211, 326, 709, 865, 874
Bsp68I TCGCGA 1 cut(s) 66
BspACI CCGC 3 cut(s) 26, 60, 975
BspANI GGCC 2 cut(s) 205, 1146
BspCNI CTCAG 3 cut(s) 175, 228, 1152
BspFNI CGCG 1 cut(s) 66
BspLI GGNNCC 1 cut(s) 973
BspMI ACCTGC 1 cut(s) 554
BspT104I TTCGAA 1 cut(s) 1087
BsrBI CCGCTC 1 cut(s) 62
BsrI ACTGG 3 cut(s) 12, 442, 1067
BssECI CCNNGG 2 cut(s) 94, 165
BssMI GATC 5 cut(s) 211, 326, 709, 865, 874
BssNI GRCGYC 2 cut(s) 99, 443
Bst4CI ACNGT 3 cut(s) 39, 201, 571
Bst6I CTCTTC 2 cut(s) 502, 1268
BstACI GRCGYC 2 cut(s) 99, 443
BstBI TTCGAA 1 cut(s) 1087
BstC8I GCNNGC 4 cut(s) 64, 478, 557, 561
BstDEI CTNAG 4 cut(s) 183, 215, 678, 1139
BstEII GGTNACC 1 cut(s) 857
BstF5I GGATG 3 cut(s) 606, 749, 1353
BstFNI CGCG 1 cut(s) 66
BstHHI GCGC 1 cut(s) 279
BstKTI GATC 5 cut(s) 214, 329, 712, 868, 877
BstMBI GATC 5 cut(s) 211, 326, 709, 865, 874
BstNSI RCATGY 3 cut(s) 247, 563, 1040
BstPI GGTNACC 1 cut(s) 857
BstSCI CCNGG 1 cut(s) 93
BstSFI CTRYAG 1 cut(s) 591
BstUI CGCG 1 cut(s) 66
BstV1I GCAGC 3 cut(s) 30, 799, 1114
BstV2I GAAGAC 1 cut(s) 623
Bsu36I CCTNAGG 1 cut(s) 678
BsuRI GGCC 2 cut(s) 205, 1146
BtrI CACGTC 1 cut(s) 293
BtsCI GGATG 3 cut(s) 606, 749, 1353
BtsIMutI CAGTG 3 cut(s) 5, 163, 1147
BtuMI TCGCGA 1 cut(s) 66
BveI ACCTGC 1 cut(s) 554
Cac8I GCNNGC 4 cut(s) 64, 478, 557, 561
CaiI CAGNNNCTG 1 cut(s) 569
CfoI GCGC 1 cut(s) 279
Cfr13I GGNCC 2 cut(s) 126, 204
CseI GACGC 1 cut(s) 88
Csp6I GTAC 2 cut(s) 407, 567
CspCI CAANNNNNGTGG 2 cut(s) 129, 164
CviAII CATG 8 cut(s) 244, 280, 560, 661, 791, 863, 1000, 1037
CviQI GTAC 2 cut(s) 407, 567
DdeI CTNAG 4 cut(s) 183, 215, 678, 1139
DpnI GATC 5 cut(s) 213, 328, 711, 867, 876
DpnII GATC 5 cut(s) 211, 326, 709, 865, 874
Eam1104I CTCTTC 2 cut(s) 502, 1268
EarI CTCTTC 2 cut(s) 502, 1268
Eco32I GATATC 1 cut(s) 235
Eco47I GGWCC 1 cut(s) 126
Eco81I CCTNAGG 1 cut(s) 678
Eco91I GGTNACC 1 cut(s) 857
EcoO65I GGTNACC 1 cut(s) 857
EcoRV GATATC 1 cut(s) 235
EcoT22I ATGCAT 1 cut(s) 1042
FaeI CATG 8 cut(s) 247, 283, 563, 664, 794, 866, 1003, 1040
FalI AAGNNNNNCTT 4 cut(s) 410, 442, 720, 752
FaqI GGGAC 2 cut(s) 303, 454
FatI CATG 8 cut(s) 243, 279, 559, 660, 790, 862, 999, 1036
Fnu4HI GCNGC 5 cut(s) 27, 44, 788, 975, 1128
FokI GGATG 3 cut(s) 613, 736, 1360
Fsp4HI GCNGC 5 cut(s) 27, 44, 788, 975, 1128
GlaI GCGC 1 cut(s) 278
GluI GCNGC 5 cut(s) 27, 44, 788, 975, 1128
GsuI CTGGAG 3 cut(s) 134, 936, 999
HaeIII GGCC 2 cut(s) 205, 1146
HapII CCGG 1 cut(s) 94
HgaI GACGC 1 cut(s) 88
HhaI GCGC 1 cut(s) 279
Hin1I GRCGYC 2 cut(s) 99, 443
Hin1II CATG 8 cut(s) 247, 283, 563, 664, 794, 866, 1003, 1040
Hin6I GCGC 1 cut(s) 277
HinP1I GCGC 1 cut(s) 277
HincII GTYRAC 1 cut(s) 57
HindII GTYRAC 1 cut(s) 57
HindIII AAGCTT 1 cut(s) 494
HinfI GANTC 7 cut(s) 70, 455, 609, 740, 981, 1135, 1363
HpaII CCGG 1 cut(s) 94
HphI GGTGA 1 cut(s) 869
Hpy166II GTNNAC 3 cut(s) 57, 296, 467
Hpy188I TCNGA 6 cut(s) 104, 146, 218, 367, 448, 700
Hpy188III TCNNGA 7 cut(s) 65, 459, 546, 613, 737, 753, 880
Hpy8I GTNNAC 3 cut(s) 57, 296, 467
HpyAV CCTTC 1 cut(s) 658
HpyCH4III ACNGT 3 cut(s) 39, 201, 571
HpyCH4IV ACGT 4 cut(s) 131, 292, 443, 1153
HpyF3I CTNAG 4 cut(s) 183, 215, 678, 1139
HpySE526I ACGT 4 cut(s) 131, 292, 443, 1153
Hsp92I GRCGYC 2 cut(s) 99, 443
Hsp92II CATG 8 cut(s) 247, 283, 563, 664, 794, 866, 1003, 1040
HspAI GCGC 1 cut(s) 277
Kzo9I GATC 5 cut(s) 211, 326, 709, 865, 874
LmnI GCTCC 2 cut(s) 911, 971
Lsp1109I GCAGC 3 cut(s) 30, 799, 1114
LweI GCATC 3 cut(s) 151, 591, 646
MaeII ACGT 4 cut(s) 131, 292, 443, 1153
MaeIII GTNAC 3 cut(s) 721, 857, 934
MalI GATC 5 cut(s) 213, 328, 711, 867, 876
MbiI CCGCTC 1 cut(s) 62
MboI GATC 5 cut(s) 211, 326, 709, 865, 874
MboII GAAGA 8 cut(s) 385, 388, 519, 628, 1101, 1190, 1250, 1285
MlyI GAGTC 3 cut(s) 618, 990, 1129
MmeI TCCRAC 3 cut(s) 228, 484, 889
Mph1103I ATGCAT 1 cut(s) 1042
MseI TTAA 5 cut(s) 342, 809, 827, 1053, 1082
MslI CAYNNNNRTG 2 cut(s) 266, 651
MspA1I CMGCKG 1 cut(s) 977
MspI CCGG 1 cut(s) 94
MspR9I CCNGG 1 cut(s) 95
Mva1269I GAATGC 3 cut(s) 557, 1040, 1224
MvnI CGCG 1 cut(s) 66
NciI CCSGG 1 cut(s) 95
NdeII GATC 5 cut(s) 211, 326, 709, 865, 874
NlaIII CATG 8 cut(s) 247, 283, 563, 664, 794, 866, 1003, 1040
NlaIV GGNNCC 1 cut(s) 973
NmeAIII GCCGAG 1 cut(s) 190
NmuCI GTSAC 3 cut(s) 721, 857, 934
NruI TCGCGA 1 cut(s) 66
NsiI ATGCAT 1 cut(s) 1042
NspI RCATGY 3 cut(s) 247, 563, 1040
NspV TTCGAA 1 cut(s) 1087
PaeI GCATGC 1 cut(s) 563
PciI ACATGT 1 cut(s) 243
PctI GAATGC 3 cut(s) 557, 1040, 1224
PfeI GAWTC 4 cut(s) 70, 455, 740, 1363
PflMI CCANNNNNTGG 1 cut(s) 991
PkrI GCNGC 5 cut(s) 28, 45, 789, 976, 1129
PleI GAGTC 3 cut(s) 617, 989, 1129
PpsI GAGTC 3 cut(s) 617, 989, 1129
PscI ACATGT 1 cut(s) 243
PsiI TTATAA 1 cut(s) 336
PspEI GGTNACC 1 cut(s) 857
PspN4I GGNNCC 1 cut(s) 973
PspPI GGNCC 2 cut(s) 126, 204
PstNI CAGNNNCTG 1 cut(s) 569
RruI TCGCGA 1 cut(s) 66
RsaI GTAC 2 cut(s) 408, 568
RsaNI GTAC 2 cut(s) 407, 567
RseI CAYNNNNRTG 2 cut(s) 266, 651
SaqAI TTAA 5 cut(s) 342, 809, 827, 1053, 1082
SatI GCNGC 5 cut(s) 27, 44, 788, 975, 1128
Sau3AI GATC 5 cut(s) 211, 326, 709, 865, 874
Sau96I GGNCC 2 cut(s) 126, 204
SchI GAGTC 3 cut(s) 618, 990, 1129
ScrFI CCNGG 1 cut(s) 95
SfaNI GCATC 3 cut(s) 151, 591, 646
SfcI CTRYAG 1 cut(s) 591
SfuI TTCGAA 1 cut(s) 1087
SinI GGWCC 1 cut(s) 126
SmiMI CAYNNNNRTG 2 cut(s) 266, 651
SphI GCATGC 1 cut(s) 563
SsiI CCGC 3 cut(s) 26, 60, 975
SspI AATATT 2 cut(s) 1026, 1185
StyD4I CCNGG 1 cut(s) 93
TaaI ACNGT 3 cut(s) 39, 201, 571
TaiI ACGT 4 cut(s) 134, 295, 446, 1156
TaqI TCGA 6 cut(s) 48, 534, 708, 768, 1087, 1101
TauI GCSGC 2 cut(s) 29, 977
TfiI GAWTC 4 cut(s) 70, 455, 740, 1363
Tru1I TTAA 5 cut(s) 342, 809, 827, 1053, 1082
Tru9I TTAA 5 cut(s) 342, 809, 827, 1053, 1082
TscAI CASTG 3 cut(s) 12, 163, 1147
TseFI GTSAC 3 cut(s) 721, 857, 934
TseI GCWGC 3 cut(s) 43, 787, 1127
Tsp45I GTSAC 3 cut(s) 721, 857, 934
TspDTI ATGAA 5 cut(s) 374, 386, 504, 677, 1329
TspGWI ACGGA 2 cut(s) 424, 621
TspRI CASTG 3 cut(s) 12, 163, 1147
Van91I CCANNNNNTGG 1 cut(s) 991
VpaK11BI GGWCC 1 cut(s) 126
XapI RAATTY 3 cut(s) 254, 1267, 1316
XceI RCATGY 3 cut(s) 247, 563, 1040
ZraI GACGTC 1 cut(s) 444
Zsp2I ATGCAT 1 cut(s) 1042
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.