pycom13g25130

disease resistance

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr13
Physical Location & Seq
Forward (+)
22047628 .. 22051821
4194 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom13g25130.4

Sequence Viewer

Length: 3867 bp
ATGAAAAGCTTGTTGTTGGAAGAGATGGTGACAAAGGGAAGATTATTGAATTGTTGTCAAGAAAATACGAGCATGCAGGTGCTGTCAATTTTGGATGCCATGAAGGATTTTGAGCTCAAGGTCTGGGTATCTGTGTCCGATGACTTTGATGGGGTGCGAGTGACAAAGGCAATTCTTGAATCAATCACATCCCGACCCGTTCAAGTGGAGGAGTTTAGTAAAATGCAGCATGATTTGAGTGAGCAATTAAGAGGAAAAAAGTTTTTAATTGTTTTAGATGATATCTGGGACAAAGATGACTATGATCTATACGATCTCTGGACAAGACTTCAATCCCCTTTTGGCGTCGGAGCAGGAGGAAGTAAGATAATTGCCCGTGACAGGAATGTTGCAAAGATTACAGGAGCCGCTGGAGTTCATAATTTGGAGTGTATGGCAGATGATGATTGTATGGAAATATTTGAGCGACACGCGTTTGGGGAAAATAATAACGGAAAACCAGTAAATTATGAGGTAATTCGAACGAAAATTGTTGGAAAATGTTGTGTATTACCATTAGCTGCAAGAACTCTCGGTGGTCCTTTACGTCGCCAAGAAAAAGAAGAGCGAGGAGAAATATTGGACAACAAATTATGGAATCTAGCAGATAAGAGTCGCCTTCTTCCTGTACTAAAGTTGAGCTATCACTATCTTCCATCACATTTGAAGAGGTGTTTTGCCTATTGCTCAATACTTCCAAATGACTATGAATTTGGGGAGAAGGAGCTCGTACTTTTGTGGATGGCAGAGGGTTTGATTCAACGAAAACATGACGACAATAAACAAATGGAGGATTTGGGCCGCGACTACTTTCGAGAGCTATTAGCAAGGTCGCTGTTTCAAGAATCAAGCAAACACAATTCACGATATGTAATGCATGACCTCATTAATGATTTAGCACGATGGGCAGCAGGCGAAATATGTTTTAGATTGGAAGATAAGCAAGGTGATAACTTGCAAAGCACTTGCTTTCGAAGGGCTCGCCATTCGTCTTTCATTGCTGGTCGATTTGATGGAGTTATGAGATTTGAGGACTTTCCAAAAGCTGAACGTTTACGAACATTCCTGCCACTTTCACTTTCAGATTCCAGGGGATGGTACAAATATTTGTTTCGTAAGGTTACTTTTGAGTTATTACCACAGTTGCAATACTTACGAGTGCTCTCTTTCAATGGCTACAAAATAACTAAGCTGCCAAAGTCAATCGGTGATTTGAGGTTGTTACAGTATCTTGACCTATCCTACATATTGATAACCAGTTTGCCCAAATCAATAAGCGCTCTTTACAACTTGCAAACATTGATATTGGAAGGTTGTGATGAATTGAAGTCATTGCCCGCGAACATGAGCAATCTAATTAAGTTGCGCCATCTCAACGACTCAGGTGCATCTTCGTTGGAAGGAATGCCTTCGCAACTAGGTCGATTGACGAATCTACAATCACTGCCTCTTTTTGTGGCGAGCGAAGGTAGTGATCAATCAGGGATAAGAGAGATAGGGCCCCTATTGCATCTCCGAGGGGCATTGTGCCTCTCAAGATTGGAGAATGTGACTGATGTCGAGGATGCCAGGAGGGCCAACTTGAAATGCAAGGAGAGGCTTGATTCGTTGGTCCTAGAATGGTCTCGTTCAAGAGACATGAGAGAAACGGAATCCACTGTGCTTGGCATGTTACAGCCTCATACAAAGATCAAGGAGCTCACCATCAAGAGGTACGCCGGCAAGGAATTTTCATCATGGGTTGGAGGTTATTTCTTCTCTAATATGGTGCTTGTGCGCTTACAGGAATGTAACAATTGTTTGTTGTTGCCACCTCTCAGACAATTGCCTCATCTCAAAGAGCTTTATATTAGAGGAATGAATGCAGTGGAAAGTGTTGGTCCTGAGTTTTATGGCGAGTGTGTCTTGGCTTTTCCGCTGTTAGAAATTCTCGAGTTTGTGGATATGCAGCATTGGAAGGTGTGGCTTCCTTTCCAACTGGATCACGGAAGTGGTGTTTTCCCTTGCCTGGAAAGGCTTTCAATAAAAAAATGTTCCAAGTTGGAAGGTAAGCTGCCAGAGAAGCTCGATTTGTTAGCCAAACTTGAAATTGTTAAATGTGAGGAATTGGCGGTTTCGATTGCCAACTACAAACAACTTCATCAAATAAACATTGACGGTTGTAAAGTGTTGAAACATACAGATGCTAAGGTTGAGTTTGAGTTATTAGAGTCCTTGTGGCTTTCAAACATTTCGGAGGTGATGTCTCTGGAAGCAGGGGAATTGTTCAGGAAGGGATTAAAGAAGGTTAGAGATTTGAAGATTAATGGATGTGAGAAGCTGACGTCCTCATGGAAGAATGAGGGTAGATTATTGCAGCGGTTGACTAGTCTTGGCCGTTTGGAAATTGAAGACAACTCTCGTCTAGTTGAAGAATTGGGAGAAGAAGCAGAGGAATTGCTGCAATTGCAAATATTGGAGTGCAAGCTTGAATTTCTGGAGTTAAAAAAGTGCGAAAATCTTTTGAAGCTACCAAAAGGGTTAAATCAGCTGTCGTCTCTTCAAGAGCTTCGCATATACGAATGTTCATCTCTAGTTTCTTTTCGAGATGTTGGTGTGCCACCTTCTCTTAAAGACATCGACATTAGAGAGTGCCATTCGTTGATATATTTTGCAAAATTCCAGATTCCCCAAAATCTCAGAAGAATAAATATAGAAAATTGCAAAAGTTTGAAATCACTTGTAGATGAGGAGGAATGTGAACGACTGGGTTTAATAGCACCGAACGGAATCTTCAGCGACAACACCAATCACTGCCTTGAATGTATTCGGATATGTATGTGTGAAAATCTGAAATCCTTACCAGATGGCTTATGCCACCTCAGCAATCTTCAAAAGCTATATATTGCACAATGTGGAAGTCTTGTTTCCATCCCGAGACTTAGTGGGGGGAGAATACCCTCCAACCTGAGAAGGATCGATATCATGAATGGATTGCGAGAAATTGGAGTGACGATCGACTACCGTGAAGGTTTGGCTTTTCCTCCCAACCTCACATTACTTACAATTTGGAAGGTCAAGAGCTGTAAGTCATTGCGGGAGTTGGAGTGGGGGTTGCACAGACTCACCTCTCTTATATACTTGGAAATCAATGTTGAAGATCGGGTTACGGTGTCGTTTCCACCCGACATGGTACGGACAGAGATGCTTTTCCCCAAATCTCTCACTAAGCTCTCAATAGAAGGCTTCCCGAATCTGAAGAAACTGAGCAGCAAAGGCTTTCAATTCCTCACCTCCCTTCAATATTTGGGACTTTGGAATTGTCCAAAGCTAGCATCCATTCCAGAGGAGGGTCTGCCTCCTTCACTAGAGAGACTGTTCATCATTGGGTGTCCAGTGCTAAAAGAGAGATGCCAACCAGGAAAAGGACATTTTAACGTGATACGAAGCTGGTGGTCCGTGTATCATTTTCTCGAGGAATGTTTTAATATTAATATTATTATTATTAATAATCATGTTTATTCTTGTAAAGTAAAGAGTCGCTGCTTTGGGAGGCCTTCAATTGGCGACAACTTGGATATTTCTCGGCCAACGTGTATTCTCATGGATTCCTATATTTGCTTTTTTTTCTTCTTTTTTTTTTTGGGTAAACAATTGCTATGTTTGCTTGGTCCCTTTTCATTTGGAGTTTTTCCCATTCAGTTTTTTCCCAGCAAGATTTTAACCAGGCCACTTAAACCTGATCTTTTATTTTATTTTAGCATCGAGAATAAGCAATCAATAAAGAAATGGAAATGCAAGGGGATTAGATTCTCAAAAAGTTGCGTTAGTTTCGGTATACTGACTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

1289

Amino Acids

147.77

Weight (kDa)

8.26

Isoelectric Point (pI)

48.99

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000070)

Species Orthologous Gene IDs
fragaria_vesca FvH4_7g00360 FvH4_7g00850 FvH4_7g02400 FvH4_7g02430 FvH4_7g02450 FvH4_7g25671 FvH4_7g25680 FvH4_7g25683 FvH4_7g26980 FvH4_7g27330 FvH4_7g27355 FvH4_7g27610 FvH4_7g27642 FvH4_7g27890 FvH4_7g27891 FvH4_7g27891 FvH4_7g27891 FvH4_7g28110 FvH4_7g28390
malus_domestica MD00G1070800.v1.1 MD00G1168000.v1.1 MD00G1168300.v1.1 MD00G1168700.v1.1 MD02G1293100.v1.1 MD02G1293200.v1.1 MD02G1314300.v1.1 MD03G1009000.v1.1 MD03G1009400.v1.1 MD03G1042300.v1.1 MD03G1042400.v1.1 MD07G1033600.v1.1 MD07G1033700.v1.1 MD07G1033900.v1.1 MD11G1011400.v1.1 MD11G1011700.v1.1 MD11G1029800.v1.1 MD11G1029900.v1.1 MD11G1030300.v1.1 MD11G1030400.v1.1 MD11G1030500.v1.1 MD11G1031300.v1.1 MD11G1031600.v1.1 MD11G1032000.v1.1 MD11G1033200.v1.1 MD11G1033600.v1.1 MD11G1033800.v1.1 MD11G1033900.v1.1 MD11G1034100.v1.1 MD11G1034400.v1.1 MD11G1040600.v1.1 MD11G1041100.v1.1 MD11G1043100.v1.1 MD11G1043500.v1.1 MD11G1044500.v1.1 MD11G1045100.v1.1 MD11G1045600.v1.1
prunus_persica Prupe.2G022400_v2.0.a1 Prupe.2G022400_v2.0.a1 Prupe.2G022400_v2.0.a1 Prupe.2G022500_v2.0.a1 Prupe.2G022500_v2.0.a1 Prupe.2G022900_v2.0.a1 Prupe.2G023500_v2.0.a1 Prupe.2G023500_v2.0.a1 Prupe.2G023500_v2.0.a1 Prupe.2G023500_v2.0.a1 Prupe.2G023500_v2.0.a1 Prupe.2G023500_v2.0.a1 Prupe.2G023600_v2.0.a1 Prupe.2G028000_v2.0.a1 Prupe.2G030200_v2.0.a1 Prupe.2G067600_v2.0.a1 Prupe.8G117900_v2.0.a1
pyrus_communis pycom02g26350 pycom03g03270 pycom07g02370 pycom11g00750 pycom11g00790 pycom11g02340 pycom11g02370 pycom11g02380 pycom11g02390 pycom11g02410 pycom11g02460 pycom11g02470 pycom11g02500 pycom11g02510 pycom11g02520 pycom11g02530 pycom11g02580 pycom11g02590 pycom11g02680 pycom11g02710 pycom11g02720 pycom11g02730 pycom11g02750 pycom11g02760 pycom11g02770 pycom11g03690 pycom13g25120 pycom13g25130 pycom13g25140 pycom13g25170 pycom13g25180 pycom13g25190 pycom13g25210
rosa_chinensis RchiOBHm_Chr1g0315001 RchiOBHm_Chr1g0315411 RchiOBHm_Chr1g0317951 RchiOBHm_Chr1g0319741 RchiOBHm_Chr1g0319841 RchiOBHm_Chr1g0319911 RchiOBHm_Chr1g0319991 RchiOBHm_Chr1g0320001 RchiOBHm_Chr1g0320021 RchiOBHm_Chr1g0320081 RchiOBHm_Chr1g0320111 RchiOBHm_Chr1g0320131 RchiOBHm_Chr1g0320161 RchiOBHm_Chr1g0320171 RchiOBHm_Chr1g0320241 RchiOBHm_Chr1g0320281 RchiOBHm_Chr1g0320411 RchiOBHm_Chr1g0320461 RchiOBHm_Chr1g0320551 RchiOBHm_Chr1g0320581 RchiOBHm_Chr1g0320661 RchiOBHm_Chr1g0320891 RchiOBHm_Chr1g0320971 RchiOBHm_Chr1g0321021 RchiOBHm_Chr1g0321031 RchiOBHm_Chr1g0321091 RchiOBHm_Chr1g0321351 RchiOBHm_Chr1g0321481 RchiOBHm_Chr1g0321491 RchiOBHm_Chr1g0327521 RchiOBHm_Chr1g0328061 RchiOBHm_Chr1g0334991 RchiOBHm_Chr1g0373781 RchiOBHm_Chr1g0373891 RchiOBHm_Chr1g0374841 RchiOBHm_Chr2g0131111 RchiOBHm_Chr2g0131121 RchiOBHm_Chr4g0408901 RchiOBHm_Chr5g0041691 RchiOBHm_Chr7g0237021
rosa_laevigata RLG00000019168 RLG00000030456 RLG00000030460 RLG00000030571
rosa_multiflora Rmu_co7963468.1_g000001 Rmu_co7991248.1_g000001 Rmu_co8195256.1_g000001 Rmu_co8312199.1_g000001 Rmu_co8349215.1_g000001 Rmu_co8351041.1_g000001 Rmu_co8422719.1_g000001 Rmu_co8450711.1_g000001 Rmu_co8465555.1_g000001 Rmu_co8489965.1_g000001 Rmu_sc0000087.1_g000014 Rmu_sc0000272.1_g000015 Rmu_sc0000724.1_g000006 Rmu_sc0000724.1_g000021 Rmu_sc0000724.1_g000022 Rmu_sc0000861.1_g000024 Rmu_sc0001049.1_g000006 Rmu_sc0001049.1_g000007 Rmu_sc0001512.1_g000001 Rmu_sc0002022.1_g000004 Rmu_sc0002063.1_g000011 Rmu_sc0002131.1_g000024 Rmu_sc0002337.1_g000012 Rmu_sc0002341.1_g000005 Rmu_sc0002539.1_g000117 Rmu_sc0002745.1_g000005 Rmu_sc0002745.1_g000006 Rmu_sc0003145.1_g000002 Rmu_sc0003199.1_g000007 Rmu_sc0003270.1_g000039 Rmu_sc0003270.1_g000040 Rmu_sc0003423.1_g000001 Rmu_sc0003423.1_g000002 Rmu_sc0003629.1_g000067 Rmu_sc0004039.1_g000002 Rmu_sc0004555.1_g000001 Rmu_sc0004555.1_g000005 Rmu_sc0004555.1_g000006 Rmu_sc0004947.1_g000025 Rmu_sc0004947.1_g000026 Rmu_sc0005255.1_g000025 Rmu_sc0007977.1_g000016 Rmu_sc0008752.1_g000005 Rmu_sc0009236.1_g000004 Rmu_sc0009236.1_g000008 Rmu_sc0009236.1_g000009 Rmu_sc0009236.1_g000010 Rmu_sc0011424.1_g000036 Rmu_sc0013413.1_g000001 Rmu_sc0013735.1_g000002 Rmu_sc0015304.1_g000002 Rmu_sc0015304.1_g000003 Rmu_sc0015585.1_g000001 Rmu_sc0018410.1_g000001 Rmu_sc0022723.1_g000001 Rmu_sc0022723.1_g000002 Rmu_sc0022724.1_g000001 Rmu_sc0023430.1_g000001 Rmu_sc0026053.1_g000001 Rmu_sc0026429.1_g000002 Rmu_sc0026647.1_g000001 Rmu_sc0031359.1_g000001 Rmu_ssc0000042.1_g000040 Rmu_ssc0000081.1_g000001 Rmu_ssc0000300.1_g000011
rosa_roxburghii Rroxscaffold_160G00433620 Rroxscaffold_160G00433990 Rroxscaffold_1G00038820 Rroxscaffold_2G00113190 Rroxscaffold_4G00283240 Rroxscaffold_4G00283930 Rroxscaffold_4G00284010 Rroxscaffold_4G00322600 Rroxscaffold_4G00327710 Rroxscaffold_4G00328100 Rroxscaffold_4G00328130 Rroxscaffold_4G00331590 Rroxscaffold_5G00353280
rosa_rugosa Rorug01G0004200 Rorug01G0018800 Rorug01G0018900 Rorug01G0029900 Rorug01G0030000 Rorug01G0030000 Rorug01G0030000 Rorug01G0030200 Rorug01G0030300 Rorug01G0030800 Rorug01G0032400 Rorug01G0032900 Rorug01G0055800 Rorug01G0067600 Rorug01G0067700 Rorug01G0067800 Rorug01G0067900 Rorug01G0068000 Rorug01G0379500 Rorug01G0379600 Rorug01G0379600 Rorug01G0385200 Rorug01G0385300 Rorug02G0295100 Rorug04G0088500 Rorug04G0088600 Rorug05G0194900 Rorug07G0301400
rosa_samantha Rh1AG014800 Rh1AG015200 Rh1AG030500 Rh1AG041800 Rh1AG042300 Rh1AG042700 Rh1AG042800 Rh1AG042900 Rh1AG045000 Rh1AG085100 Rh1AG085200 Rh1AG388600 Rh1AG396700 Rh1AG396900 Rh1BG007300 Rh1BG039200 Rh1BG039600 Rh1BG042800 Rh1BG067300 Rh1BG109700 Rh1BG109900 Rh1BG354000 Rh1CG043800 Rh1CG044400 Rh1DG008600 Rh1DG022900 Rh1DG023400 Rh1DG023600 Rh1DG023900 Rh1DG024100 Rh1DG024400 Rh1DG024500 Rh1DG025500 Rh1DG025700 Rh1DG026500 Rh1DG026800 Rh1DG038900 Rh1DG048800 Rh1DG049300 Rh1DG051700 Rh1DG052000 Rh1DG146200 Rh1DG383500 Rh2BG354900 Rh2CG333600 Rh4BG149600 Rh4BG149700 Rh4CG160600
rosa_wichuraiana Rw0G001100 Rw0G001130 Rw0G001180 Rw0G012580 Rw1G003480 Rw1G003540 Rw1G003600 Rw1G003640 Rw1G003670 Rw1G003750 Rw1G003940 Rw1G006650 Rw1G034550 Rw1G034560 Rw1G034650 Rw1G034660 Rw1G035170 Rw1G035190 Rw1G037060 Rw2G028210 Rw4G012540 Rw5G026370 Rw7G037900

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 67
AatII GACGTC 1 cut(s) 2366
Acc36I ACCTGC 1 cut(s) 67
AccB7I CCANNNNNTGG 1 cut(s) 1134
AccI GTMKAC 1 cut(s) 3856
AccII CGCG 3 cut(s) 473, 843, 1379
AciI CCGC 7 cut(s) 408, 841, 1377, 1955, 2150, 2398, 3115
AclI AACGTT 1 cut(s) 1090
AclWI GGATC 2 cut(s) 2028, 3002
AcoI YGGCCR 2 cut(s) 2413, 3605
AcsI RAATTY 5 cut(s) 749, 1766, 1965, 2510, 2696
AcuI CTGAAG 2 cut(s) 2797, 3296
AcyI GRCGYC 2 cut(s) 345, 2363
AdeI CACNNNGTG 1 cut(s) 2933
AfaI GTAC 5 cut(s) 669, 771, 1139, 1754, 3213
AfeI AGCGCT 1 cut(s) 1318
AfiI CCNNNNNNNGG 7 cut(s) 381, 1134, 1749, 2047, 3368, 3443, 3581
AflIII ACRYGT 2 cut(s) 471, 3611
AhlI ACTAGT 1 cut(s) 2405
AjnI CCWGG 5 cut(s) 1127, 1607, 2046, 3436, 3743
AleI CACNNNNGTG 1 cut(s) 2028
Alw21I GWGCWC 4 cut(s) 117, 768, 1203, 1740
Alw26I GTCTC 6 cut(s) 1668, 1668, 2289, 2580, 2950, 3385
AlwI GGATC 2 cut(s) 2028, 3002
AlwNI CAGNNNCTG 1 cut(s) 82
Ama87I CYCGRG 3 cut(s) 1970, 2953, 3491
Aor51HI AGCGCT 1 cut(s) 1318
AoxI GGCC 7 cut(s) 838, 1538, 1614, 2413, 3572, 3605, 3746
ApaI GGGCCC 1 cut(s) 1542
ApoI RAATTY 5 cut(s) 749, 1766, 1965, 2510, 2696
ArsI GACNNNNNNTTYG 2 cut(s) 734, 766
AseI ATTAAT 4 cut(s) 927, 2343, 3510, 3525
Asp700I GAANNNNTTC 2 cut(s) 1447, 2844
AspLEI GCGC 3 cut(s) 1319, 1407, 1818
AspS9I GGNCC 9 cut(s) 578, 838, 1538, 1539, 1614, 1651, 1919, 3474, 3689
AsuHPI GGTGA 7 cut(s) 40, 998, 1259, 1732, 2290, 3136, 3301
AsuII TTCGAA 2 cut(s) 520, 1012
AsuNHI GCTAGC 1 cut(s) 3349
AvaI CYCGRG 3 cut(s) 1970, 2953, 3491
AvaII GGWCC 5 cut(s) 578, 1651, 1919, 3474, 3689
BaeGI GKGCMC 1 cut(s) 1542
BanII GRGCYC 5 cut(s) 117, 768, 1021, 1542, 1740
BbsI GAAGAC 1 cut(s) 2436
Bbv12I GWGCWC 4 cut(s) 117, 768, 1203, 1740
BbvCI CCTCAGC 1 cut(s) 2900
BceAI ACGGC 1 cut(s) 2400
BcgI CGANNNNNNTGC 4 cut(s) 1406, 1440, 1442, 1476
BciT130I CCWGG 5 cut(s) 1129, 1609, 2048, 3438, 3745
BclI TGATCA 1 cut(s) 1513
BcoDI GTCTC 6 cut(s) 1668, 1668, 2289, 2580, 2950, 3385
BcuI ACTAGT 1 cut(s) 2405
BfaI CTAG 8 cut(s) 641, 1457, 1655, 2406, 2444, 2612, 3350, 3386
BfoI RGCGCY 1 cut(s) 1320
BfuAI ACCTGC 1 cut(s) 67
BglI GCCNNNNNGGC 1 cut(s) 1613
Bme1390I CCNGG 5 cut(s) 1129, 1609, 2048, 3438, 3745
Bme18I GGWCC 5 cut(s) 578, 1651, 1919, 3474, 3689
BmeT110I CYCGRG 3 cut(s) 1970, 2953, 3491
BmgT120I GGNCC 9 cut(s) 578, 838, 1538, 1539, 1614, 1651, 1919, 3474, 3689
BmiI GGNNCC 4 cut(s) 406, 1540, 1541, 3691
BmrFI CCNGG 5 cut(s) 1129, 1609, 2048, 3438, 3745
BmrI ACTGGG 1 cut(s) 2795
BmsI GCATC 9 cut(s) 85, 1436, 1558, 1594, 2212, 3213, 3362, 3419, 3789
BmtI GCTAGC 1 cut(s) 3353
BmuI ACTGGG 1 cut(s) 2795
BoxI GACNNNNGTC 1 cut(s) 1595
BpiI GAAGAC 1 cut(s) 2436
BpmI CTGGAG 2 cut(s) 432, 2537
Bpu10I CCTNAGC 2 cut(s) 2226, 2900
Bpu14I TTCGAA 2 cut(s) 520, 1012
BpuEI CTTGAG 2 cut(s) 101, 1558
Bsa29I ATCGAT 1 cut(s) 2997
BsaBI GATNNNNATC 1 cut(s) 2999
BsaHI GRCGYC 2 cut(s) 345, 2363
BsaI GGTCTC 1 cut(s) 1668
BsaJI CCNNGG 2 cut(s) 1128, 1555
BsaXI ACNNNNNCTCC 6 cut(s) 2267, 2297, 3110, 3116, 3140, 3146
Bsc4I CCNNNNNNNGG 7 cut(s) 381, 1134, 1749, 2047, 3368, 3443, 3581
Bse118I RCCGGY 1 cut(s) 1757
Bse1I ACTGG 5 cut(s) 500, 1296, 2022, 2790, 3413
Bse3DI GCAATG 3 cut(s) 1035, 1370, 3110
Bse8I GATNNNNATC 1 cut(s) 2999
BseBI CCWGG 5 cut(s) 1129, 1609, 2048, 3438, 3745
BseCI ATCGAT 1 cut(s) 2997
BseDI CCNNGG 2 cut(s) 1128, 1555
BseGI GGATG 8 cut(s) 100, 188, 786, 1139, 1609, 2354, 2949, 3353
BseJI GATNNNNATC 1 cut(s) 2999
BseLI CCNNNNNNNGG 7 cut(s) 381, 1134, 1749, 2047, 3368, 3443, 3581
BseMI GCAATG 3 cut(s) 1035, 1370, 3110
BseMII CTCAG 7 cut(s) 1434, 1870, 1914, 2731, 2914, 2978, 3275
BseNI ACTGG 5 cut(s) 500, 1296, 2022, 2790, 3413
BseRI GAGGAG 4 cut(s) 224, 624, 2783, 3380
BseSI GKGCMC 1 cut(s) 1542
BseYI CCCAGC 1 cut(s) 3728
Bsh1236I CGCG 3 cut(s) 473, 843, 1379
Bsh1285I CGRYCG 1 cut(s) 3036
BshFI GGCC 7 cut(s) 840, 1540, 1616, 2415, 3574, 3607, 3748
BshVI ATCGAT 1 cut(s) 2997
BsiEI CGRYCG 1 cut(s) 3036
BsiHKAI GWGCWC 4 cut(s) 117, 768, 1203, 1740
BsiHKCI CYCGRG 3 cut(s) 1970, 2953, 3491
BsiSI CCGG 1 cut(s) 1758
BslFI GGGAC 3 cut(s) 302, 3342, 3675
BslI CCNNNNNNNGG 7 cut(s) 381, 1134, 1749, 2047, 3368, 3443, 3581
BsmAI GTCTC 6 cut(s) 1668, 1668, 2289, 2580, 2950, 3385
BsmBI CGTCTC 1 cut(s) 2580
BsmFI GGGAC 3 cut(s) 302, 3342, 3675
BsmI GAATGC 2 cut(s) 1449, 1906
BsnI GGCC 7 cut(s) 840, 1540, 1616, 2415, 3574, 3607, 3748
Bso31I GGTCTC 1 cut(s) 1668
BsoBI CYCGRG 3 cut(s) 1970, 2953, 3491
Bsp119I TTCGAA 2 cut(s) 520, 1012
Bsp120I GGGCCC 1 cut(s) 1538
Bsp1286I GDGCHC 6 cut(s) 117, 768, 1021, 1203, 1542, 1740
Bsp143I GATC 9 cut(s) 304, 313, 1513, 1728, 2020, 2994, 3033, 3178, 3760
BspACI CCGC 7 cut(s) 408, 841, 1377, 1955, 2150, 2398, 3115
BspANI GGCC 7 cut(s) 840, 1540, 1616, 2415, 3574, 3607, 3748
BspCNI CTCAG 7 cut(s) 1433, 1869, 1915, 2730, 2913, 2979, 3276
BspDI ATCGAT 1 cut(s) 2997
BspFNI CGCG 3 cut(s) 473, 843, 1379
BspHI TCATGA 1 cut(s) 3003
BspLI GGNNCC 4 cut(s) 406, 1540, 1541, 3691
BspMI ACCTGC 1 cut(s) 67
BspOI GCTAGC 1 cut(s) 3353
BspPI GGATC 2 cut(s) 2028, 3002
BspQI GCTCTTC 1 cut(s) 597
BspT104I TTCGAA 2 cut(s) 520, 1012
BspTNI GGTCTC 1 cut(s) 1668
BsrDI GCAATG 3 cut(s) 1035, 1370, 3110
BsrFI RCCGGY 1 cut(s) 1757
BsrI ACTGG 5 cut(s) 500, 1296, 2022, 2790, 3413
BssAI RCCGGY 1 cut(s) 1757
BssECI CCNNGG 2 cut(s) 1128, 1555
BssMI GATC 9 cut(s) 304, 313, 1513, 1728, 2020, 2994, 3033, 3178, 3760
BssNAI GTATAC 1 cut(s) 3857
BssNI GRCGYC 2 cut(s) 345, 2363
Bst1107I GTATAC 1 cut(s) 3857
Bst2UI CCWGG 5 cut(s) 1129, 1609, 2048, 3438, 3745
Bst4CI ACNGT 7 cut(s) 1182, 1266, 1699, 2198, 3044, 3190, 3396
Bst6I CTCTTC 4 cut(s) 15, 597, 701, 2583
BstACI GRCGYC 2 cut(s) 345, 2363
BstBI TTCGAA 2 cut(s) 520, 1012
BstC8I GCNNGC 8 cut(s) 74, 952, 1021, 1377, 1501, 1759, 2504, 3351
BstF5I GGATG 8 cut(s) 100, 188, 786, 1139, 1609, 2354, 2949, 3353
BstFNI CGCG 3 cut(s) 473, 843, 1379
BstH2I RGCGCY 1 cut(s) 1320
BstHHI GCGC 3 cut(s) 1319, 1407, 1818
BstKTI GATC 9 cut(s) 307, 316, 1516, 1731, 2023, 2997, 3036, 3181, 3763
BstMAI GTCTC 6 cut(s) 1668, 1668, 2289, 2580, 2950, 3385
BstMBI GATC 9 cut(s) 304, 313, 1513, 1728, 2020, 2994, 3033, 3178, 3760
BstMCI CGRYCG 1 cut(s) 3036
BstMWI GCNNNNNNNGC 8 cut(s) 944, 1546, 1613, 2101, 2485, 2901, 3294, 3682
BstNI CCWGG 5 cut(s) 1129, 1609, 2048, 3438, 3745
BstNSI RCATGY 2 cut(s) 76, 1711
BstPAI GACNNNNGTC 1 cut(s) 1595
BstSCI CCNGG 5 cut(s) 1127, 1607, 2046, 3436, 3743
BstSLI GKGCMC 1 cut(s) 1542
BstUI CGCG 3 cut(s) 473, 843, 1379
BstV2I GAAGAC 1 cut(s) 2436
BstZ17I GTATAC 1 cut(s) 3857
Bsu15I ATCGAT 1 cut(s) 2997
BsuRI GGCC 7 cut(s) 840, 1540, 1616, 2415, 3574, 3607, 3748
BsuTUI ATCGAT 1 cut(s) 2997
BtsCI GGATG 8 cut(s) 100, 188, 786, 1139, 1609, 2354, 2949, 3353
BtsI GCAGTG 3 cut(s) 1481, 1911, 2830
BtsIMutI CAGTG 5 cut(s) 1481, 1695, 1911, 2830, 3420
BveI ACCTGC 1 cut(s) 67
Cac8I GCNNGC 8 cut(s) 74, 952, 1021, 1377, 1501, 1759, 2504, 3351
CaiI CAGNNNCTG 1 cut(s) 82
CciI TCATGA 1 cut(s) 3003
CfoI GCGC 3 cut(s) 1319, 1407, 1818
Cfr10I RCCGGY 1 cut(s) 1757
Cfr13I GGNCC 9 cut(s) 578, 838, 1538, 1539, 1614, 1651, 1919, 3474, 3689
ClaI ATCGAT 1 cut(s) 2997
CseI GACGC 1 cut(s) 334
Csp6I GTAC 5 cut(s) 668, 770, 1138, 1753, 3212
CspCI CAANNNNNGTGG 2 cut(s) 1684, 1719
CviQI GTAC 5 cut(s) 668, 770, 1138, 1753, 3212
DpnI GATC 9 cut(s) 306, 315, 1515, 1730, 2022, 2996, 3035, 3180, 3762
DpnII GATC 9 cut(s) 304, 313, 1513, 1728, 2020, 2994, 3033, 3178, 3760
DraIII CACNNNGTG 1 cut(s) 2933
EaeI YGGCCR 2 cut(s) 2413, 3605
Eam1104I CTCTTC 4 cut(s) 15, 597, 701, 2583
EarI CTCTTC 4 cut(s) 15, 597, 701, 2583
Ecl136II GAGCTC 3 cut(s) 115, 766, 1738
Eco147I AGGCCT 1 cut(s) 3574
Eco24I GRGCYC 5 cut(s) 117, 768, 1021, 1542, 1740
Eco31I GGTCTC 1 cut(s) 1668
Eco32I GATATC 2 cut(s) 283, 3001
Eco47I GGWCC 5 cut(s) 578, 1651, 1919, 3474, 3689
Eco47III AGCGCT 1 cut(s) 1318
Eco53kI GAGCTC 3 cut(s) 115, 766, 1738
Eco57I CTGAAG 2 cut(s) 2797, 3296
Eco88I CYCGRG 3 cut(s) 1970, 2953, 3491
EcoICRI GAGCTC 3 cut(s) 115, 766, 1738
EcoO109I RGGNCCY 2 cut(s) 1538, 1539
EcoRII CCWGG 5 cut(s) 1127, 1607, 2046, 3436, 3743
EcoRV GATATC 2 cut(s) 283, 3001
EcoT22I ATGCAT 1 cut(s) 918
EcoT38I GRGCYC 5 cut(s) 117, 768, 1021, 1542, 1740
Esp3I CGTCTC 1 cut(s) 2580
FaqI GGGAC 3 cut(s) 302, 3342, 3675
FauI CCCGC 2 cut(s) 1384, 3108
FbaI TGATCA 1 cut(s) 1513
FblI GTMKAC 1 cut(s) 3856
FokI GGATG 8 cut(s) 107, 175, 793, 1146, 1616, 2361, 2936, 3340
FriOI GRGCYC 5 cut(s) 117, 768, 1021, 1542, 1740
FspBI CTAG 8 cut(s) 641, 1457, 1655, 2406, 2444, 2612, 3350, 3386
GlaI GCGC 3 cut(s) 1318, 1406, 1817
GsaI CCCAGC 1 cut(s) 3732
GsuI CTGGAG 2 cut(s) 432, 2537
HaeII RGCGCY 1 cut(s) 1320
HaeIII GGCC 7 cut(s) 840, 1540, 1616, 2415, 3574, 3607, 3748
HapII CCGG 1 cut(s) 1758
HgaI GACGC 1 cut(s) 334
HhaI GCGC 3 cut(s) 1319, 1407, 1818
Hin1I GRCGYC 2 cut(s) 345, 2363
Hin6I GCGC 3 cut(s) 1317, 1405, 1816
HinP1I GCGC 3 cut(s) 1317, 1405, 1816
HincII GTYRAC 1 cut(s) 2403
HindII GTYRAC 1 cut(s) 2403
HindIII AAGCTT 2 cut(s) 7, 2504
HpaII CCGG 1 cut(s) 1758
HphI GGTGA 7 cut(s) 40, 998, 1259, 1732, 2290, 3136, 3301
Hpy166II GTNNAC 5 cut(s) 1094, 2403, 2780, 3668, 3857
Hpy8I GTNNAC 5 cut(s) 1094, 2403, 2780, 3668, 3857
Hpy99I CGWCG 2 cut(s) 350, 591
HpyCH4III ACNGT 7 cut(s) 1182, 1266, 1699, 2198, 3044, 3190, 3396
HpyCH4IV ACGT 5 cut(s) 586, 1090, 2363, 3456, 3611
HpyF10VI GCNNNNNNNGC 8 cut(s) 944, 1546, 1613, 2101, 2485, 2901, 3294, 3682
HpySE526I ACGT 5 cut(s) 586, 1090, 2363, 3456, 3611
Hsp92I GRCGYC 2 cut(s) 345, 2363
HspAI GCGC 3 cut(s) 1317, 1405, 1816
KroI GCCGGC 1 cut(s) 1757
KroNI GCCGGC 1 cut(s) 1759
Ksp22I TGATCA 1 cut(s) 1513
Kzo9I GATC 9 cut(s) 304, 313, 1513, 1728, 2020, 2994, 3033, 3178, 3760
LguI GCTCTTC 1 cut(s) 597
LmnI GCTCC 4 cut(s) 350, 404, 763, 1735
LweI GCATC 9 cut(s) 85, 1436, 1558, 1594, 2212, 3213, 3362, 3419, 3789
MaeI CTAG 8 cut(s) 641, 1457, 1655, 2406, 2444, 2612, 3350, 3386
MaeII ACGT 5 cut(s) 586, 1090, 2363, 3456, 3611
MalI GATC 9 cut(s) 306, 315, 1515, 1730, 2022, 2996, 3035, 3180, 3762
MboI GATC 9 cut(s) 304, 313, 1513, 1728, 2020, 2994, 3033, 3178, 3760
MfeI CAATTG 5 cut(s) 1834, 1862, 2483, 3579, 3671
MhlI GDGCHC 6 cut(s) 117, 768, 1021, 1203, 1542, 1740
MluI ACGCGT 1 cut(s) 471
MlyI GAGTC 5 cut(s) 661, 1412, 2258, 3135, 3565
MmeI TCCRAC 8 cut(s) 328, 514, 1416, 1762, 2038, 2061, 3006, 3102
Mph1103I ATGCAT 1 cut(s) 918
MroNI GCCGGC 1 cut(s) 1757
MroXI GAANNNNTTC 2 cut(s) 1447, 2844
MslI CAYNNNNRTG 3 cut(s) 77, 2028, 2220
MspA1I CMGCKG 4 cut(s) 410, 1957, 2398, 2569
MspI CCGG 1 cut(s) 1758
MspR9I CCNGG 5 cut(s) 1129, 1609, 2048, 3438, 3745
MunI CAATTG 5 cut(s) 1834, 1862, 2483, 3579, 3671
Mva1269I GAATGC 2 cut(s) 1449, 1906
MvaI CCWGG 5 cut(s) 1129, 1609, 2048, 3438, 3745
MvnI CGCG 3 cut(s) 473, 843, 1379
MwoI GCNNNNNNNGC 8 cut(s) 944, 1546, 1613, 2101, 2485, 2901, 3294, 3682
NaeI GCCGGC 1 cut(s) 1759
NdeII GATC 9 cut(s) 304, 313, 1513, 1728, 2020, 2994, 3033, 3178, 3760
NgoMIV GCCGGC 1 cut(s) 1757
NheI GCTAGC 1 cut(s) 3349
NlaIV GGNNCC 4 cut(s) 406, 1540, 1541, 3691
NmeAIII GCCGAG 1 cut(s) 3583
NmuCI GTSAC 5 cut(s) 28, 160, 377, 1588, 3028
NsiI ATGCAT 1 cut(s) 918
NspI RCATGY 2 cut(s) 76, 1711
NspV TTCGAA 2 cut(s) 520, 1012
OliI CACNNNNGTG 1 cut(s) 2028
PaeI GCATGC 1 cut(s) 76
PaeR7I CTCGAG 2 cut(s) 1970, 3491
PagI TCATGA 1 cut(s) 3003
PaqCI CACCTGC 1 cut(s) 67
PceI AGGCCT 1 cut(s) 3574
PciSI GCTCTTC 1 cut(s) 597
PctI GAATGC 2 cut(s) 1449, 1906
PdiI GCCGGC 1 cut(s) 1759
PdmI GAANNNNTTC 2 cut(s) 1447, 2844
PflMI CCANNNNNTGG 1 cut(s) 1134
Ple19I CGATCG 1 cut(s) 3036
PleI GAGTC 5 cut(s) 660, 1412, 2257, 3135, 3564
PpsI GAGTC 5 cut(s) 660, 1412, 2257, 3135, 3564
PshAI GACNNNNGTC 1 cut(s) 1595
PshBI ATTAAT 4 cut(s) 927, 2343, 3510, 3525
Psp124BI GAGCTC 3 cut(s) 117, 768, 1740
Psp1406I AACGTT 1 cut(s) 1090
Psp6I CCWGG 5 cut(s) 1127, 1607, 2046, 3436, 3743
PspFI CCCAGC 1 cut(s) 3728
PspGI CCWGG 5 cut(s) 1127, 1607, 2046, 3436, 3743
PspN4I GGNNCC 4 cut(s) 406, 1540, 1541, 3691
PspOMI GGGCCC 1 cut(s) 1538
PspPI GGNCC 9 cut(s) 578, 838, 1538, 1539, 1614, 1651, 1919, 3474, 3689
PstNI CAGNNNCTG 1 cut(s) 82
PvuI CGATCG 1 cut(s) 3036
PvuII CAGCTG 1 cut(s) 2569
RsaI GTAC 5 cut(s) 669, 771, 1139, 1754, 3213
RsaNI GTAC 5 cut(s) 668, 770, 1138, 1753, 3212
RseI CAYNNNNRTG 3 cut(s) 77, 2028, 2220
SacI GAGCTC 3 cut(s) 117, 768, 1740
SapI GCTCTTC 1 cut(s) 597
Sau3AI GATC 9 cut(s) 304, 313, 1513, 1728, 2020, 2994, 3033, 3178, 3760
Sau96I GGNCC 9 cut(s) 578, 838, 1538, 1539, 1614, 1651, 1919, 3474, 3689
SchI GAGTC 5 cut(s) 661, 1412, 2258, 3135, 3565
ScrFI CCNGG 5 cut(s) 1129, 1609, 2048, 3438, 3745
SduI GDGCHC 6 cut(s) 117, 768, 1021, 1203, 1542, 1740
SfaNI GCATC 9 cut(s) 85, 1436, 1558, 1594, 2212, 3213, 3362, 3419, 3789
Sfr274I CTCGAG 2 cut(s) 1970, 3491
SfuI TTCGAA 2 cut(s) 520, 1012
SinI GGWCC 5 cut(s) 578, 1651, 1919, 3474, 3689
SlaI CTCGAG 2 cut(s) 1970, 3491
SmiMI CAYNNNNRTG 3 cut(s) 77, 2028, 2220
SmlI CTYRAG 4 cut(s) 116, 1573, 1970, 3491
SmoI CTYRAG 4 cut(s) 116, 1573, 1970, 3491
SpeI ACTAGT 1 cut(s) 2405
SphI GCATGC 1 cut(s) 76
SseBI AGGCCT 1 cut(s) 3574
SsiI CCGC 7 cut(s) 408, 841, 1377, 1955, 2150, 2398, 3115
SspI AATATT 7 cut(s) 459, 618, 1145, 2493, 3323, 3508, 3514
SspMI CTAG 8 cut(s) 641, 1457, 1655, 2406, 2444, 2612, 3350, 3386
SstI GAGCTC 3 cut(s) 117, 768, 1740
StuI AGGCCT 1 cut(s) 3574
StyD4I CCNGG 5 cut(s) 1127, 1607, 2046, 3436, 3743
TaaI ACNGT 7 cut(s) 1182, 1266, 1699, 2198, 3044, 3190, 3396
TaiI ACGT 5 cut(s) 589, 1093, 2366, 3459, 3614
TatI WGTACW 1 cut(s) 667
TauI GCSGC 2 cut(s) 410, 843
TscAI CASTG 5 cut(s) 1488, 1702, 1911, 2837, 3420
TseFI GTSAC 5 cut(s) 28, 160, 377, 1588, 3028
Tsp45I GTSAC 5 cut(s) 28, 160, 377, 1588, 3028
TspGWI ACGGA 6 cut(s) 507, 1703, 2040, 2820, 3229, 3466
TspRI CASTG 5 cut(s) 1488, 1702, 1911, 2837, 3420
Van91I CCANNNNNTGG 1 cut(s) 1134
VpaK11BI GGWCC 5 cut(s) 578, 1651, 1919, 3474, 3689
VspI ATTAAT 4 cut(s) 927, 2343, 3510, 3525
XapI RAATTY 5 cut(s) 749, 1766, 1965, 2510, 2696
XceI RCATGY 2 cut(s) 76, 1711
XhoI CTCGAG 2 cut(s) 1970, 3491
XmiI GTMKAC 1 cut(s) 3856
XmnI GAANNNNTTC 2 cut(s) 1447, 2844
XspI CTAG 8 cut(s) 641, 1457, 1655, 2406, 2444, 2612, 3350, 3386
ZraI GACGTC 1 cut(s) 2364
Zsp2I ATGCAT 1 cut(s) 918
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.