disease resistance
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Rx_N | PF18052 | 8 - 96 | 9e-24 | Rx N-terminal domain |
| NB-ARC | PF00931 | 173 - 343 | 6.4e-38 | NB-ARC domain |
| WHD_DRP | PF23559 | 429 - 497 | 5e-24 | Disease resistance protein Winged helix domain |
| LRR_14 | PF23598 | 578 - 849 | 5.6e-20 | Leucine-rich repeat region |
| LRR_R13L1-DRL21 | PF25019 | 692 - 813 | 3.4e-32 | R13L1/DRL21 LRRs |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 2709 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 880 |
| AatII | GACGTC | 1 cut(s) | 3323 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 2396, 3604 |
| AccBSI | CCGCTC | 1 cut(s) | 2521 |
| AciI | CCGC | 6 cut(s) | 26, 1050, 1098, 1648, 2147, 2521 |
| AclWI | GGATC | 3 cut(s) | 1318, 2746, 3794 |
| AcoI | YGGCCR | 2 cut(s) | 2052, 2163 |
| AcuI | CTGAAG | 5 cut(s) | 1236, 2888, 2987, 3344, 3629 |
| AcvI | CACGTG | 1 cut(s) | 932 |
| AcyI | GRCGYC | 2 cut(s) | 3320, 3665 |
| AfaI | GTAC | 6 cut(s) | 315, 1870, 2202, 2820, 3205, 4167 |
| AfiI | CCNNNNNNNGG | 9 cut(s) | 503, 605, 1336, 2396, 2536, 2830, 3604, 3983, 4058 |
| AflII | CTTAAG | 1 cut(s) | 674 |
| AflIII | ACRYGT | 3 cut(s) | 929, 1642, 2247 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 3279 |
| AhlI | ACTAGT | 2 cut(s) | 446, 3706 |
| AjiI | CACGTC | 1 cut(s) | 747 |
| AjnI | CCWGG | 6 cut(s) | 216, 556, 598, 904, 1681, 2440 |
| AleI | CACNNNNGTG | 1 cut(s) | 2663 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 4106, 4138 |
| Alw21I | GWGCWC | 1 cut(s) | 904 |
| Alw26I | GTCTC | 4 cut(s) | 2224, 3266, 3287, 3767 |
| Alw44I | GTGCAC | 1 cut(s) | 900 |
| AlwI | GGATC | 3 cut(s) | 1318, 2746, 3794 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 3634 |
| Ama87I | CYCGRG | 1 cut(s) | 3284 |
| AoxI | GGCC | 3 cut(s) | 464, 2052, 2163 |
| ApaLI | GTGCAC | 1 cut(s) | 900 |
| ApeKI | GCWGC | 7 cut(s) | 43, 131, 148, 286, 1115, 2683, 2765 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 3696, 3728 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 1013, 3429, 3549 |
| AspLEI | GCGC | 1 cut(s) | 3563 |
| AspS9I | GGNCC | 4 cut(s) | 1052, 2087, 2527, 4071 |
| AsuC2I | CCSGG | 3 cut(s) | 2105, 3158, 3467 |
| AsuHPI | GGTGA | 6 cut(s) | 527, 2365, 2761, 3757, 3806, 3916 |
| AsuII | TTCGAA | 1 cut(s) | 1620 |
| AvaI | CYCGRG | 1 cut(s) | 3284 |
| AvaII | GGWCC | 4 cut(s) | 1052, 2087, 2527, 4071 |
| AxyI | CCTNAGG | 2 cut(s) | 1745, 3325 |
| BaeGI | GKGCMC | 1 cut(s) | 904 |
| BalI | TGGCCA | 1 cut(s) | 2165 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 3196, 3228 |
| BbrPI | CACGTG | 1 cut(s) | 932 |
| BbsI | GAAGAC | 2 cut(s) | 3219, 3834 |
| Bbv12I | GWGCWC | 1 cut(s) | 904 |
| BbvCI | CCTCAGC | 1 cut(s) | 4157 |
| BbvI | GCAGC | 7 cut(s) | 30, 118, 135, 298, 1102, 2695, 2752 |
| BccI | CCATC | 7 cut(s) | 506, 782, 1330, 1598, 2155, 2518, 2609 |
| BciT130I | CCWGG | 6 cut(s) | 218, 558, 600, 906, 1683, 2442 |
| BciVI | GTATCC | 1 cut(s) | 3164 |
| BclI | TGATCA | 2 cut(s) | 379, 1630 |
| BcnI | CCSGG | 3 cut(s) | 2105, 3158, 3467 |
| BcoDI | GTCTC | 4 cut(s) | 2224, 3266, 3287, 3767 |
| BcuI | ACTAGT | 2 cut(s) | 446, 3706 |
| BfmI | CTRYAG | 2 cut(s) | 878, 2621 |
| BfoI | RGCGCY | 1 cut(s) | 3564 |
| BfrI | CTTAAG | 1 cut(s) | 674 |
| BfuI | GTATCC | 1 cut(s) | 3164 |
| BglII | AGATCT | 4 cut(s) | 15, 1556, 1780, 2863 |
| BisI | GCNGC | 8 cut(s) | 27, 44, 132, 149, 287, 1116, 2684, 2766 |
| BlsI | GCNGC | 8 cut(s) | 28, 45, 133, 150, 288, 1117, 2685, 2767 |
| BmcAI | AGTACT | 2 cut(s) | 1870, 3205 |
| Bme1390I | CCNGG | 9 cut(s) | 218, 558, 600, 906, 1683, 2105, 2442, 3158, 3467 |
| Bme18I | GGWCC | 4 cut(s) | 1052, 2087, 2527, 4071 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 3279 |
| BmeT110I | CYCGRG | 1 cut(s) | 3284 |
| BmgBI | CACGTC | 1 cut(s) | 747 |
| BmgT120I | GGNCC | 4 cut(s) | 1052, 2087, 2527, 4071 |
| BmiI | GGNNCC | 2 cut(s) | 2089, 3404 |
| BmrFI | CCNGG | 9 cut(s) | 218, 558, 600, 906, 1683, 2105, 2442, 3158, 3467 |
| BpiI | GAAGAC | 2 cut(s) | 3219, 3834 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 527, 559 |
| BpmI | CTGGAG | 1 cut(s) | 2463 |
| Bpu10I | CCTNAGC | 2 cut(s) | 461, 4157 |
| Bpu14I | TTCGAA | 1 cut(s) | 1620 |
| BpuEI | CTTGAG | 3 cut(s) | 529, 814, 3592 |
| BpuMI | CCSGG | 3 cut(s) | 2105, 3158, 3467 |
| Bsa29I | ATCGAT | 2 cut(s) | 1793, 3506 |
| BsaAI | YACGTR | 1 cut(s) | 932 |
| BsaHI | GRCGYC | 2 cut(s) | 3320, 3665 |
| BsaJI | CCNNGG | 1 cut(s) | 2104 |
| BsaWI | WCCGGW | 1 cut(s) | 4119 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1793, 1823 |
| Bsc4I | CCNNNNNNNGG | 9 cut(s) | 503, 605, 1336, 2396, 2536, 2830, 3604, 3983, 4058 |
| Bse1I | ACTGG | 4 cut(s) | 132, 1866, 2928, 4073 |
| Bse21I | CCTNAGG | 2 cut(s) | 1745, 3325 |
| Bse3DI | GCAATG | 2 cut(s) | 1456, 2111 |
| BseBI | CCWGG | 6 cut(s) | 218, 558, 600, 906, 1683, 2442 |
| BseCI | ATCGAT | 2 cut(s) | 1793, 3506 |
| BseDI | CCNNGG | 1 cut(s) | 2104 |
| BseLI | CCNNNNNNNGG | 9 cut(s) | 503, 605, 1336, 2396, 2536, 2830, 3604, 3983, 4058 |
| BseMI | GCAATG | 2 cut(s) | 1456, 2111 |
| BseMII | CTCAG | 8 cut(s) | 249, 638, 2628, 2783, 3131, 3221, 3916, 4171 |
| BseNI | ACTGG | 4 cut(s) | 132, 1866, 2928, 4073 |
| BseSI | GKGCMC | 1 cut(s) | 904 |
| BseXI | GCAGC | 7 cut(s) | 30, 118, 135, 298, 1102, 2695, 2752 |
| BshFI | GGCC | 3 cut(s) | 466, 2054, 2165 |
| BshVI | ATCGAT | 2 cut(s) | 1793, 3506 |
| BsiHKAI | GWGCWC | 1 cut(s) | 904 |
| BsiHKCI | CYCGRG | 1 cut(s) | 3284 |
| BsiSI | CCGG | 4 cut(s) | 2104, 3157, 3467, 4120 |
| BslFI | GGGAC | 7 cut(s) | 448, 733, 868, 2073, 2122, 2580, 3294 |
| BslI | CCNNNNNNNGG | 9 cut(s) | 503, 605, 1336, 2396, 2536, 2830, 3604, 3983, 4058 |
| BsmAI | GTCTC | 4 cut(s) | 2224, 3266, 3287, 3767 |
| BsmFI | GGGAC | 7 cut(s) | 448, 733, 868, 2073, 2122, 2580, 3294 |
| BsmI | GAATGC | 2 cut(s) | 29, 2001 |
| BsnI | GGCC | 3 cut(s) | 466, 2054, 2165 |
| BsoBI | CYCGRG | 1 cut(s) | 3284 |
| Bsp119I | TTCGAA | 1 cut(s) | 1620 |
| Bsp1286I | GDGCHC | 1 cut(s) | 904 |
| BspACI | CCGC | 6 cut(s) | 26, 1050, 1098, 1648, 2147, 2521 |
| BspANI | GGCC | 3 cut(s) | 466, 2054, 2165 |
| BspCNI | CTCAG | 8 cut(s) | 250, 637, 2629, 2782, 3132, 3220, 3915, 4170 |
| BspDI | ATCGAT | 2 cut(s) | 1793, 3506 |
| BspHI | TCATGA | 1 cut(s) | 1717 |
| BspLI | GGNNCC | 2 cut(s) | 2089, 3404 |
| BspMAI | CTGCAG | 1 cut(s) | 2625 |
| BspPI | GGATC | 3 cut(s) | 1318, 2746, 3794 |
| BspT104I | TTCGAA | 1 cut(s) | 1620 |
| BspTI | CTTAAG | 1 cut(s) | 674 |
| BsrBI | CCGCTC | 1 cut(s) | 2521 |
| BsrDI | GCAATG | 2 cut(s) | 1456, 2111 |
| BsrI | ACTGG | 4 cut(s) | 132, 1866, 2928, 4073 |
| BssECI | CCNNGG | 1 cut(s) | 2104 |
| BssNI | GRCGYC | 2 cut(s) | 3320, 3665 |
| Bst2UI | CCWGG | 6 cut(s) | 218, 558, 600, 906, 1683, 2442 |
| Bst6I | CTCTTC | 4 cut(s) | 156, 3042, 3648, 3672 |
| BstACI | GRCGYC | 2 cut(s) | 3320, 3665 |
| BstAFI | CTTAAG | 1 cut(s) | 674 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 944 |
| BstBAI | YACGTR | 1 cut(s) | 932 |
| BstBI | TTCGAA | 1 cut(s) | 1620 |
| BstC8I | GCNNGC | 4 cut(s) | 2001, 2381, 2486, 3626 |
| BstEII | GGTNACC | 1 cut(s) | 2631 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 2534 |
| BstH2I | RGCGCY | 1 cut(s) | 3564 |
| BstHHI | GCGC | 1 cut(s) | 3563 |
| BstMAI | GTCTC | 4 cut(s) | 2224, 3266, 3287, 3767 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 52, 140, 944, 1735, 2153, 2162 |
| BstNI | CCWGG | 6 cut(s) | 218, 558, 600, 906, 1683, 2442 |
| BstNSI | RCATGY | 5 cut(s) | 1028, 1646, 2251, 3447, 3628 |
| BstPI | GGTNACC | 1 cut(s) | 2631 |
| BstSCI | CCNGG | 9 cut(s) | 216, 556, 598, 904, 1681, 2103, 2440, 3156, 3465 |
| BstSFI | CTRYAG | 2 cut(s) | 878, 2621 |
| BstSLI | GKGCMC | 1 cut(s) | 904 |
| BstV1I | GCAGC | 7 cut(s) | 30, 118, 135, 298, 1102, 2695, 2752 |
| BstV2I | GAAGAC | 2 cut(s) | 3219, 3834 |
| BstX2I | RGATCY | 5 cut(s) | 15, 1556, 1780, 2863, 3799 |
| BstYI | RGATCY | 5 cut(s) | 15, 1556, 1780, 2863, 3799 |
| Bsu15I | ATCGAT | 2 cut(s) | 1793, 3506 |
| Bsu36I | CCTNAGG | 2 cut(s) | 1745, 3325 |
| BsuI | GTATCC | 1 cut(s) | 3164 |
| BsuRI | GGCC | 3 cut(s) | 466, 2054, 2165 |
| BsuTUI | ATCGAT | 2 cut(s) | 1793, 3506 |
| BtrI | CACGTC | 1 cut(s) | 747 |
| BtsI | GCAGTG | 3 cut(s) | 12, 192, 1676 |
| BtsIMutI | CAGTG | 9 cut(s) | 12, 192, 255, 649, 696, 754, 1676, 3737, 3796 |
| Cac8I | GCNNGC | 4 cut(s) | 2001, 2381, 2486, 3626 |
| CaiI | CAGNNNCTG | 1 cut(s) | 3634 |
| CciI | TCATGA | 1 cut(s) | 1717 |
| CfoI | GCGC | 1 cut(s) | 3563 |
| Cfr13I | GGNCC | 4 cut(s) | 1052, 2087, 2527, 4071 |
| ClaI | ATCGAT | 2 cut(s) | 1793, 3506 |
| CseI | GACGC | 4 cut(s) | 1538, 1946, 3355, 3654 |
| Csp6I | GTAC | 6 cut(s) | 314, 1869, 2201, 2819, 3204, 4166 |
| CspCI | CAANNNNNGTGG | 4 cut(s) | 1081, 1116, 4073, 4108 |
| CviQI | GTAC | 6 cut(s) | 314, 1869, 2201, 2819, 3204, 4166 |
| DraI | TTTAAA | 1 cut(s) | 3175 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 880 |
| DriI | GACNNNNNGTC | 1 cut(s) | 3279 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 880 |
| EaeI | YGGCCR | 2 cut(s) | 2052, 2163 |
| Eam1104I | CTCTTC | 4 cut(s) | 156, 3042, 3648, 3672 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 3279 |
| EarI | CTCTTC | 4 cut(s) | 156, 3042, 3648, 3672 |
| Eco32I | GATATC | 2 cut(s) | 3122, 3366 |
| Eco47I | GGWCC | 4 cut(s) | 1052, 2087, 2527, 4071 |
| Eco57I | CTGAAG | 5 cut(s) | 1236, 2888, 2987, 3344, 3629 |
| Eco72I | CACGTG | 1 cut(s) | 932 |
| Eco81I | CCTNAGG | 2 cut(s) | 1745, 3325 |
| Eco88I | CYCGRG | 1 cut(s) | 3284 |
| Eco91I | GGTNACC | 1 cut(s) | 2631 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 2534 |
| EcoO65I | GGTNACC | 1 cut(s) | 2631 |
| EcoRI | GAATTC | 1 cut(s) | 770 |
| EcoRII | CCWGG | 6 cut(s) | 216, 556, 598, 904, 1681, 2440 |
| EcoRV | GATATC | 2 cut(s) | 3122, 3366 |
| EcoT22I | ATGCAT | 1 cut(s) | 1470 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 399, 431, 717, 749 |
| FaqI | GGGAC | 7 cut(s) | 448, 733, 868, 2073, 2122, 2580, 3294 |
| FbaI | TGATCA | 2 cut(s) | 379, 1630 |
| Fnu4HI | GCNGC | 8 cut(s) | 27, 44, 132, 149, 287, 1116, 2684, 2766 |
| Fsp4HI | GCNGC | 8 cut(s) | 27, 44, 132, 149, 287, 1116, 2684, 2766 |
| GlaI | GCGC | 1 cut(s) | 3562 |
| GluI | GCNGC | 8 cut(s) | 27, 44, 132, 149, 287, 1116, 2684, 2766 |
| GsuI | CTGGAG | 1 cut(s) | 2463 |
| HaeII | RGCGCY | 1 cut(s) | 3564 |
| HaeIII | GGCC | 3 cut(s) | 466, 2054, 2165 |
| HapII | CCGG | 4 cut(s) | 2104, 3157, 3467, 4120 |
| HgaI | GACGC | 4 cut(s) | 1538, 1946, 3355, 3654 |
| HhaI | GCGC | 1 cut(s) | 3563 |
| Hin1I | GRCGYC | 2 cut(s) | 3320, 3665 |
| Hin6I | GCGC | 1 cut(s) | 3561 |
| HinP1I | GCGC | 1 cut(s) | 3561 |
| HincII | GTYRAC | 1 cut(s) | 2850 |
| HindII | GTYRAC | 1 cut(s) | 2850 |
| HindIII | AAGCTT | 2 cut(s) | 368, 413 |
| HpaII | CCGG | 4 cut(s) | 2104, 3157, 3467, 4120 |
| HphI | GGTGA | 6 cut(s) | 527, 2365, 2761, 3757, 3806, 3916 |
| Hpy166II | GTNNAC | 5 cut(s) | 902, 973, 2658, 2850, 4074 |
| Hpy8I | GTNNAC | 5 cut(s) | 902, 973, 2658, 2850, 4074 |
| HpyAV | CCTTC | 9 cut(s) | 112, 501, 1260, 1561, 2173, 2530, 2654, 3472, 3574 |
| HpyCH4IV | ACGT | 3 cut(s) | 746, 931, 3320 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 52, 140, 944, 1735, 2153, 2162 |
| HpySE526I | ACGT | 3 cut(s) | 746, 931, 3320 |
| Hsp92I | GRCGYC | 2 cut(s) | 3320, 3665 |
| HspAI | GCGC | 1 cut(s) | 3561 |
| Ksp22I | TGATCA | 2 cut(s) | 379, 1630 |
| LmnI | GCTCC | 4 cut(s) | 140, 283, 1505, 4144 |
| Lsp1109I | GCAGC | 7 cut(s) | 30, 118, 135, 298, 1102, 2695, 2752 |
| MaeII | ACGT | 3 cut(s) | 746, 931, 3320 |
| MbiI | CCGCTC | 1 cut(s) | 2521 |
| MfeI | CAATTG | 2 cut(s) | 1376, 2402 |
| MflI | RGATCY | 5 cut(s) | 15, 1556, 1780, 2863, 3799 |
| MhlI | GDGCHC | 1 cut(s) | 904 |
| MlsI | TGGCCA | 1 cut(s) | 2165 |
| MluNI | TGGCCA | 1 cut(s) | 2165 |
| MlyI | GAGTC | 3 cut(s) | 1201, 1696, 2786 |
| MmeI | TCCRAC | 6 cut(s) | 484, 675, 986, 1968, 3615, 3723 |
| Mox20I | TGGCCA | 1 cut(s) | 2165 |
| Mph1103I | ATGCAT | 1 cut(s) | 1470 |
| MroXI | GAANNNNTTC | 3 cut(s) | 1013, 3429, 3549 |
| MscI | TGGCCA | 1 cut(s) | 2165 |
| MslI | CAYNNNNRTG | 5 cut(s) | 260, 897, 2663, 2676, 2760 |
| Msp20I | TGGCCA | 1 cut(s) | 2165 |
| MspCI | CTTAAG | 1 cut(s) | 674 |
| MspI | CCGG | 4 cut(s) | 2104, 3157, 3467, 4120 |
| MspR9I | CCNGG | 9 cut(s) | 218, 558, 600, 906, 1683, 2105, 2442, 3158, 3467 |
| MunI | CAATTG | 2 cut(s) | 1376, 2402 |
| Mva1269I | GAATGC | 2 cut(s) | 29, 2001 |
| MvaI | CCWGG | 6 cut(s) | 218, 558, 600, 906, 1683, 2442 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 52, 140, 944, 1735, 2153, 2162 |
| NciI | CCSGG | 3 cut(s) | 2105, 3158, 3467 |
| NlaIV | GGNNCC | 2 cut(s) | 2089, 3404 |
| NmuCI | GTSAC | 5 cut(s) | 515, 742, 854, 922, 2778 |
| NsiI | ATGCAT | 1 cut(s) | 1470 |
| NspI | RCATGY | 5 cut(s) | 1028, 1646, 2251, 3447, 3628 |
| NspV | TTCGAA | 1 cut(s) | 1620 |
| OliI | CACNNNNGTG | 1 cut(s) | 2663 |
| PaeI | GCATGC | 1 cut(s) | 3628 |
| PaeR7I | CTCGAG | 1 cut(s) | 3284 |
| PagI | TCATGA | 1 cut(s) | 1717 |
| PciI | ACATGT | 2 cut(s) | 1642, 2247 |
| PctI | GAATGC | 2 cut(s) | 29, 2001 |
| PdmI | GAANNNNTTC | 3 cut(s) | 1013, 3429, 3549 |
| PfeI | GAWTC | 7 cut(s) | 737, 1773, 1859, 1942, 2066, 2327, 2668 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 2396, 3604 |
| PfoI | TCCNGGA | 1 cut(s) | 3465 |
| PkrI | GCNGC | 8 cut(s) | 28, 45, 133, 150, 288, 1117, 2685, 2767 |
| PleI | GAGTC | 3 cut(s) | 1200, 1696, 2785 |
| PmaCI | CACGTG | 1 cut(s) | 932 |
| PmlI | CACGTG | 1 cut(s) | 932 |
| PpsI | GAGTC | 3 cut(s) | 1200, 1696, 2785 |
| Ppu21I | YACGTR | 1 cut(s) | 932 |
| PscI | ACATGT | 2 cut(s) | 1642, 2247 |
| PsiI | TTATAA | 1 cut(s) | 2709 |
| Psp6I | CCWGG | 6 cut(s) | 216, 556, 598, 904, 1681, 2440 |
| PspCI | CACGTG | 1 cut(s) | 932 |
| PspEI | GGTNACC | 1 cut(s) | 2631 |
| PspGI | CCWGG | 6 cut(s) | 216, 556, 598, 904, 1681, 2440 |
| PspN4I | GGNNCC | 2 cut(s) | 2089, 3404 |
| PspPI | GGNCC | 4 cut(s) | 1052, 2087, 2527, 4071 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 1912, 1944 |
| PstI | CTGCAG | 1 cut(s) | 2625 |
| PstNI | CAGNNNCTG | 1 cut(s) | 3634 |
| PsuI | RGATCY | 5 cut(s) | 15, 1556, 1780, 2863, 3799 |
| RsaI | GTAC | 6 cut(s) | 315, 1870, 2202, 2820, 3205, 4167 |
| RsaNI | GTAC | 6 cut(s) | 314, 1869, 2201, 2819, 3204, 4166 |
| RseI | CAYNNNNRTG | 5 cut(s) | 260, 897, 2663, 2676, 2760 |
| SatI | GCNGC | 8 cut(s) | 27, 44, 132, 149, 287, 1116, 2684, 2766 |
| Sau96I | GGNCC | 4 cut(s) | 1052, 2087, 2527, 4071 |
| ScaI | AGTACT | 2 cut(s) | 1870, 3205 |
| SchI | GAGTC | 3 cut(s) | 1201, 1696, 2786 |
| ScrFI | CCNGG | 9 cut(s) | 218, 558, 600, 906, 1683, 2105, 2442, 3158, 3467 |
| SduI | GDGCHC | 1 cut(s) | 904 |
| SfcI | CTRYAG | 2 cut(s) | 878, 2621 |
| Sfr274I | CTCGAG | 1 cut(s) | 3284 |
| SfuI | TTCGAA | 1 cut(s) | 1620 |
| SinI | GGWCC | 4 cut(s) | 1052, 2087, 2527, 4071 |
| SlaI | CTCGAG | 1 cut(s) | 3284 |
| SmiMI | CAYNNNNRTG | 5 cut(s) | 260, 897, 2663, 2676, 2760 |
| SmlI | CTYRAG | 5 cut(s) | 544, 674, 793, 3284, 3571 |
| SmoI | CTYRAG | 5 cut(s) | 544, 674, 793, 3284, 3571 |
| SpeI | ACTAGT | 2 cut(s) | 446, 3706 |
| SphI | GCATGC | 1 cut(s) | 3628 |
| SsiI | CCGC | 6 cut(s) | 26, 1050, 1098, 1648, 2147, 2521 |
| StyD4I | CCNGG | 9 cut(s) | 216, 556, 598, 904, 1681, 2103, 2440, 3156, 3465 |
| TaiI | ACGT | 3 cut(s) | 749, 934, 3323 |
| TaqII | GACCGA | 1 cut(s) | 2075 |
| TatI | WGTACW | 2 cut(s) | 1868, 3203 |
| TauI | GCSGC | 1 cut(s) | 29 |
| TfiI | GAWTC | 7 cut(s) | 737, 1773, 1859, 1942, 2066, 2327, 2668 |
| TscAI | CASTG | 9 cut(s) | 12, 192, 262, 649, 696, 761, 1683, 3744, 3796 |
| TseFI | GTSAC | 5 cut(s) | 515, 742, 854, 922, 2778 |
| TseI | GCWGC | 7 cut(s) | 43, 131, 148, 286, 1115, 2683, 2765 |
| Tsp45I | GTSAC | 5 cut(s) | 515, 742, 854, 922, 2778 |
| TspGWI | ACGGA | 2 cut(s) | 74, 418 |
| TspRI | CASTG | 9 cut(s) | 12, 192, 262, 649, 696, 761, 1683, 3744, 3796 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 2396, 3604 |
| Vha464I | CTTAAG | 1 cut(s) | 674 |
| VneI | GTGCAC | 1 cut(s) | 900 |
| VpaK11BI | GGWCC | 4 cut(s) | 1052, 2087, 2527, 4071 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 2534 |
| XbaI | TCTAGA | 2 cut(s) | 1418, 3673 |
| XceI | RCATGY | 5 cut(s) | 1028, 1646, 2251, 3447, 3628 |
| XhoI | CTCGAG | 1 cut(s) | 3284 |
| XmnI | GAANNNNTTC | 3 cut(s) | 1013, 3429, 3549 |
| ZraI | GACGTC | 1 cut(s) | 3321 |
| ZrmI | AGTACT | 2 cut(s) | 1870, 3205 |
| Zsp2I | ATGCAT | 1 cut(s) | 1470 |