Rmu_co8465555.1_g000001

disease resistance

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_co8465555.1
OG0000070
Physical Location & Seq
Reverse (-)
195 .. 1847
1653 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_co8465555.1_g000001.1.cds

Sequence Viewer

Length: 1653 bp
ctggccaatgttgaaagtgtgggtgctgagttttatggagattgtagcttgccttttccagtgttggaagagctgaggttcgaggatatgcaaaattggaaggagtggcttccttgcaaaagaaatgaagaaattcgaattttcccatgcatgggaaaacttttcatccgtagttgcccaagtctgaaaggttggttgcccaagaacatggattcattatcaaagctgcgtattgttgaatgtgaagagttagtggtttcaattgccaattataaacatcttcgtgagctgtgcatcgacggttgcaaaagggtggtgcacagaaggggagttaagtttaacttactggaggatatgcagcttcatagtacttcagagttcagactcaaaatagatgggttcatcagaggattgacaaagcttcaaagattgcggattactggttgtgaagagttgacgtgtttttgggagaatgagtatagatggctgcagcctcgggtttctaatattattggaggcaacatctctgattcccctcctcactttattcaagaggtaagagcgctcaagcaacttgtgttaattggatgctcaaatctaatttcttttccagaagctggttggccaccttgtctagaatctgtgaaaatggagtcgtgtaattctttaaggcattttgtaaggaatcagataccgccaagcataagaagaatagagatagcaaaatgtcaaaatttgaaacgattagtcaaggatgctggggagctagagggttgtctggagaagttggaaataacagggtgtgcatctttgacatccttatcaggggaaggaggccgactacccagaacgctcaagaacattttgataagtgaatgtgaacaattggagtccataatcaaaacattccacgatgacacttgtcttgaagttattcagatatgcgaatgtgcaaatctcaaatcctttccagaggggctgtgccatctctccattcttcgcaagttaattataagcgaatgtggaagtctcgtttctttcccgagaggaaggttgccatccaacctgacatacttgtatatctacaattgtgatcagttggaagcgctccccagaggcatggacaacctcagctgtcttcagactttgaaagtgcaatgctgtggaggtaatttggcatccattctagaagagggtttcccacccaacctaattcaacttgttattatgaaacccaaaagctgtaagcctctctcagagtgggggcttcaccacttggacagactcacctctcttaaagaattgtggatctgtggtgtagatccagatctggtgtcctttccgccaaaggaggtgctactccctaaatctctcattaaactcaggattggagacttcccaaatctgaagcgcctatcatcactcacttctcttgaatcccttaccatttggaattgtccgaagctagcatctattattggagaacaagaggatcatctgcctctttcacttacacagcttcgcatctttaagggctgtccgctgctcacaaagaaatacaaaccaggtaaaggacgacactggtccaaaatagcccacatcccttacgtttatgttggagacttctttgacgaagccgaagccgaccgctga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
NB-ARC

Protein Analysis

550

Amino Acids

62.56

Weight (kDa)

8.04

Isoelectric Point (pI)

50.07

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000070)

Species Orthologous Gene IDs
fragaria_vesca FvH4_7g00360 FvH4_7g00850 FvH4_7g02400 FvH4_7g02430 FvH4_7g02450 FvH4_7g25671 FvH4_7g25680 FvH4_7g25683 FvH4_7g26980 FvH4_7g27330 FvH4_7g27355 FvH4_7g27610 FvH4_7g27642 FvH4_7g27890 FvH4_7g27891 FvH4_7g27891 FvH4_7g27891 FvH4_7g28110 FvH4_7g28390
malus_domestica MD00G1070800.v1.1 MD00G1168000.v1.1 MD00G1168300.v1.1 MD00G1168700.v1.1 MD02G1293100.v1.1 MD02G1293200.v1.1 MD02G1314300.v1.1 MD03G1009000.v1.1 MD03G1009400.v1.1 MD03G1042300.v1.1 MD03G1042400.v1.1 MD07G1033600.v1.1 MD07G1033700.v1.1 MD07G1033900.v1.1 MD11G1011400.v1.1 MD11G1011700.v1.1 MD11G1029800.v1.1 MD11G1029900.v1.1 MD11G1030300.v1.1 MD11G1030400.v1.1 MD11G1030500.v1.1 MD11G1031300.v1.1 MD11G1031600.v1.1 MD11G1032000.v1.1 MD11G1033200.v1.1 MD11G1033600.v1.1 MD11G1033800.v1.1 MD11G1033900.v1.1 MD11G1034100.v1.1 MD11G1034400.v1.1 MD11G1040600.v1.1 MD11G1041100.v1.1 MD11G1043100.v1.1 MD11G1043500.v1.1 MD11G1044500.v1.1 MD11G1045100.v1.1 MD11G1045600.v1.1
prunus_persica Prupe.2G022400_v2.0.a1 Prupe.2G022400_v2.0.a1 Prupe.2G022400_v2.0.a1 Prupe.2G022500_v2.0.a1 Prupe.2G022500_v2.0.a1 Prupe.2G022900_v2.0.a1 Prupe.2G023500_v2.0.a1 Prupe.2G023500_v2.0.a1 Prupe.2G023500_v2.0.a1 Prupe.2G023500_v2.0.a1 Prupe.2G023500_v2.0.a1 Prupe.2G023500_v2.0.a1 Prupe.2G023600_v2.0.a1 Prupe.2G028000_v2.0.a1 Prupe.2G030200_v2.0.a1 Prupe.2G067600_v2.0.a1 Prupe.8G117900_v2.0.a1
pyrus_communis pycom02g26350 pycom03g03270 pycom07g02370 pycom11g00750 pycom11g00790 pycom11g02340 pycom11g02370 pycom11g02380 pycom11g02390 pycom11g02410 pycom11g02460 pycom11g02470 pycom11g02500 pycom11g02510 pycom11g02520 pycom11g02530 pycom11g02580 pycom11g02590 pycom11g02680 pycom11g02710 pycom11g02720 pycom11g02730 pycom11g02750 pycom11g02760 pycom11g02770 pycom11g03690 pycom13g25120 pycom13g25130 pycom13g25140 pycom13g25170 pycom13g25180 pycom13g25190 pycom13g25210
rosa_chinensis RchiOBHm_Chr1g0315001 RchiOBHm_Chr1g0315411 RchiOBHm_Chr1g0317951 RchiOBHm_Chr1g0319741 RchiOBHm_Chr1g0319841 RchiOBHm_Chr1g0319911 RchiOBHm_Chr1g0319991 RchiOBHm_Chr1g0320001 RchiOBHm_Chr1g0320021 RchiOBHm_Chr1g0320081 RchiOBHm_Chr1g0320111 RchiOBHm_Chr1g0320131 RchiOBHm_Chr1g0320161 RchiOBHm_Chr1g0320171 RchiOBHm_Chr1g0320241 RchiOBHm_Chr1g0320281 RchiOBHm_Chr1g0320411 RchiOBHm_Chr1g0320461 RchiOBHm_Chr1g0320551 RchiOBHm_Chr1g0320581 RchiOBHm_Chr1g0320661 RchiOBHm_Chr1g0320891 RchiOBHm_Chr1g0320971 RchiOBHm_Chr1g0321021 RchiOBHm_Chr1g0321031 RchiOBHm_Chr1g0321091 RchiOBHm_Chr1g0321351 RchiOBHm_Chr1g0321481 RchiOBHm_Chr1g0321491 RchiOBHm_Chr1g0327521 RchiOBHm_Chr1g0328061 RchiOBHm_Chr1g0334991 RchiOBHm_Chr1g0373781 RchiOBHm_Chr1g0373891 RchiOBHm_Chr1g0374841 RchiOBHm_Chr2g0131111 RchiOBHm_Chr2g0131121 RchiOBHm_Chr4g0408901 RchiOBHm_Chr5g0041691 RchiOBHm_Chr7g0237021
rosa_laevigata RLG00000019168 RLG00000030456 RLG00000030460 RLG00000030571
rosa_multiflora Rmu_co7963468.1_g000001 Rmu_co7991248.1_g000001 Rmu_co8195256.1_g000001 Rmu_co8312199.1_g000001 Rmu_co8349215.1_g000001 Rmu_co8351041.1_g000001 Rmu_co8422719.1_g000001 Rmu_co8450711.1_g000001 Rmu_co8465555.1_g000001 Rmu_co8489965.1_g000001 Rmu_sc0000087.1_g000014 Rmu_sc0000272.1_g000015 Rmu_sc0000724.1_g000006 Rmu_sc0000724.1_g000021 Rmu_sc0000724.1_g000022 Rmu_sc0000861.1_g000024 Rmu_sc0001049.1_g000006 Rmu_sc0001049.1_g000007 Rmu_sc0001512.1_g000001 Rmu_sc0002022.1_g000004 Rmu_sc0002063.1_g000011 Rmu_sc0002131.1_g000024 Rmu_sc0002337.1_g000012 Rmu_sc0002341.1_g000005 Rmu_sc0002539.1_g000117 Rmu_sc0002745.1_g000005 Rmu_sc0002745.1_g000006 Rmu_sc0003145.1_g000002 Rmu_sc0003199.1_g000007 Rmu_sc0003270.1_g000039 Rmu_sc0003270.1_g000040 Rmu_sc0003423.1_g000001 Rmu_sc0003423.1_g000002 Rmu_sc0003629.1_g000067 Rmu_sc0004039.1_g000002 Rmu_sc0004555.1_g000001 Rmu_sc0004555.1_g000005 Rmu_sc0004555.1_g000006 Rmu_sc0004947.1_g000025 Rmu_sc0004947.1_g000026 Rmu_sc0005255.1_g000025 Rmu_sc0007977.1_g000016 Rmu_sc0008752.1_g000005 Rmu_sc0009236.1_g000004 Rmu_sc0009236.1_g000008 Rmu_sc0009236.1_g000009 Rmu_sc0009236.1_g000010 Rmu_sc0011424.1_g000036 Rmu_sc0013413.1_g000001 Rmu_sc0013735.1_g000002 Rmu_sc0015304.1_g000002 Rmu_sc0015304.1_g000003 Rmu_sc0015585.1_g000001 Rmu_sc0018410.1_g000001 Rmu_sc0022723.1_g000001 Rmu_sc0022723.1_g000002 Rmu_sc0022724.1_g000001 Rmu_sc0023430.1_g000001 Rmu_sc0026053.1_g000001 Rmu_sc0026429.1_g000002 Rmu_sc0026647.1_g000001 Rmu_sc0031359.1_g000001 Rmu_ssc0000042.1_g000040 Rmu_ssc0000081.1_g000001 Rmu_ssc0000300.1_g000011
rosa_roxburghii Rroxscaffold_160G00433620 Rroxscaffold_160G00433990 Rroxscaffold_1G00038820 Rroxscaffold_2G00113190 Rroxscaffold_4G00283240 Rroxscaffold_4G00283930 Rroxscaffold_4G00284010 Rroxscaffold_4G00322600 Rroxscaffold_4G00327710 Rroxscaffold_4G00328100 Rroxscaffold_4G00328130 Rroxscaffold_4G00331590 Rroxscaffold_5G00353280
rosa_rugosa Rorug01G0004200 Rorug01G0018800 Rorug01G0018900 Rorug01G0029900 Rorug01G0030000 Rorug01G0030000 Rorug01G0030000 Rorug01G0030200 Rorug01G0030300 Rorug01G0030800 Rorug01G0032400 Rorug01G0032900 Rorug01G0055800 Rorug01G0067600 Rorug01G0067700 Rorug01G0067800 Rorug01G0067900 Rorug01G0068000 Rorug01G0379500 Rorug01G0379600 Rorug01G0379600 Rorug01G0385200 Rorug01G0385300 Rorug02G0295100 Rorug04G0088500 Rorug04G0088600 Rorug05G0194900 Rorug07G0301400
rosa_samantha Rh1AG014800 Rh1AG015200 Rh1AG030500 Rh1AG041800 Rh1AG042300 Rh1AG042700 Rh1AG042800 Rh1AG042900 Rh1AG045000 Rh1AG085100 Rh1AG085200 Rh1AG388600 Rh1AG396700 Rh1AG396900 Rh1BG007300 Rh1BG039200 Rh1BG039600 Rh1BG042800 Rh1BG067300 Rh1BG109700 Rh1BG109900 Rh1BG354000 Rh1CG043800 Rh1CG044400 Rh1DG008600 Rh1DG022900 Rh1DG023400 Rh1DG023600 Rh1DG023900 Rh1DG024100 Rh1DG024400 Rh1DG024500 Rh1DG025500 Rh1DG025700 Rh1DG026500 Rh1DG026800 Rh1DG038900 Rh1DG048800 Rh1DG049300 Rh1DG051700 Rh1DG052000 Rh1DG146200 Rh1DG383500 Rh2BG354900 Rh2CG333600 Rh4BG149600 Rh4BG149700 Rh4CG160600
rosa_wichuraiana Rw0G001100 Rw0G001130 Rw0G001180 Rw0G012580 Rw1G003480 Rw1G003540 Rw1G003600 Rw1G003640 Rw1G003670 Rw1G003750 Rw1G003940 Rw1G006650 Rw1G034550 Rw1G034560 Rw1G034650 Rw1G034660 Rw1G035170 Rw1G035190 Rw1G037060 Rw2G028210 Rw4G012540 Rw5G026370 Rw7G037900

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 273, 1013
AccB7I CCANNNNNTGG 1 cut(s) 617
AciI CCGC 5 cut(s) 433, 695, 1343, 1541, 1648
AclWI GGATC 3 cut(s) 1316, 1316, 1500
AcoI YGGCCR 2 cut(s) 3, 623
AcsI RAATTY 3 cut(s) 132, 138, 733
AcuI CTGAAG 3 cut(s) 357, 1124, 1427
AfaI GTAC 1 cut(s) 370
AfeI AGCGCT 2 cut(s) 564, 1107
AfiI CCNNNNNNNGG 5 cut(s) 151, 152, 617, 825, 1571
AflIII ACRYGT 1 cut(s) 458
AjiI CACGTC 1 cut(s) 459
AjnI CCWGG 1 cut(s) 1564
Alw21I GWGCWC 1 cut(s) 321
Alw26I GTCTC 3 cut(s) 1034, 1386, 1614
Alw44I GTGCAC 1 cut(s) 317
AlwI GGATC 3 cut(s) 1316, 1316, 1500
AlwNI CAGNNNCTG 1 cut(s) 617
Ama87I CYCGRG 2 cut(s) 495, 1042
Aor51HI AGCGCT 2 cut(s) 564, 1107
AoxI GGCC 3 cut(s) 3, 623, 835
ApaLI GTGCAC 1 cut(s) 317
ApeKI GCWGC 5 cut(s) 226, 358, 487, 490, 1543
ApoI RAATTY 3 cut(s) 132, 138, 733
Asp700I GAANNNNTTC 2 cut(s) 132, 933
AspLEI GCGC 3 cut(s) 565, 1108, 1413
AspS9I GGNCC 1 cut(s) 1584
AsuHPI GGTGA 2 cut(s) 1262, 1279
AsuII TTCGAA 1 cut(s) 136
AsuNHI GCTAGC 1 cut(s) 1465
AvaI CYCGRG 2 cut(s) 495, 1042
AvaII GGWCC 1 cut(s) 1584
BaeGI GKGCMC 1 cut(s) 321
BalI TGGCCA 2 cut(s) 5, 625
BbsI GAAGAC 1 cut(s) 1130
Bbv12I GWGCWC 1 cut(s) 321
BbvCI CCTCAGC 2 cut(s) 74, 1130
BbvI GCAGC 5 cut(s) 213, 370, 474, 502, 1530
BccI CCATC 4 cut(s) 389, 477, 993, 1066
BciT130I CCWGG 1 cut(s) 1566
BclI TGATCA 1 cut(s) 1093
BcoDI GTCTC 3 cut(s) 1034, 1386, 1614
BfaI CTAG 4 cut(s) 635, 767, 1187, 1466
BfmI CTRYAG 1 cut(s) 488
BfoI RGCGCY 3 cut(s) 566, 1109, 1414
BglII AGATCT 1 cut(s) 1327
BisI GCNGC 5 cut(s) 227, 359, 488, 491, 1544
BlsI GCNGC 5 cut(s) 228, 360, 489, 492, 1545
BmcAI AGTACT 1 cut(s) 370
Bme1390I CCNGG 1 cut(s) 1566
Bme18I GGWCC 1 cut(s) 1584
BmeT110I CYCGRG 2 cut(s) 495, 1042
BmgBI CACGTC 1 cut(s) 459
BmgT120I GGNCC 1 cut(s) 1584
BmrFI CCNGG 1 cut(s) 1566
BmsI GCATC 7 cut(s) 303, 578, 745, 815, 1187, 1478, 1533
BmtI GCTAGC 1 cut(s) 1469
BoxI GACNNNNGTC 2 cut(s) 921, 1582
BpiI GAAGAC 1 cut(s) 1130
BpmI CTGGAG 2 cut(s) 368, 800
Bpu10I CCTNAGC 2 cut(s) 74, 1130
Bpu14I TTCGAA 1 cut(s) 136
BpuEI CTTGAG 2 cut(s) 551, 839
BsaBI GATNNNNATC 1 cut(s) 1326
BsaJI CCNNGG 1 cut(s) 494
BsaXI ACNNNNNCTCC 2 cut(s) 461, 491
Bsc4I CCNNNNNNNGG 5 cut(s) 151, 152, 617, 825, 1571
Bse1I ACTGG 4 cut(s) 59, 351, 445, 1586
Bse3DI GCAATG 1 cut(s) 1163
Bse8I GATNNNNATC 1 cut(s) 1326
BseBI CCWGG 1 cut(s) 1566
BseDI CCNNGG 1 cut(s) 494
BseGI GGATG 7 cut(s) 165, 593, 760, 815, 1058, 1178, 1599
BseJI GATNNNNATC 1 cut(s) 1326
BseLI CCNNNNNNNGG 5 cut(s) 151, 152, 617, 825, 1571
BseMI GCAATG 1 cut(s) 1163
BseMII CTCAG 5 cut(s) 18, 65, 1144, 1269, 1396
BseNI ACTGG 4 cut(s) 59, 351, 445, 1586
BseRI GAGGAG 1 cut(s) 528
BseSI GKGCMC 1 cut(s) 321
BseXI GCAGC 5 cut(s) 213, 370, 474, 502, 1530
BseYI CCCAGC 1 cut(s) 758
Bsh1285I CGRYCG 1 cut(s) 1648
BshFI GGCC 3 cut(s) 5, 625, 837
BsiEI CGRYCG 1 cut(s) 1648
BsiHKAI GWGCWC 1 cut(s) 321
BsiHKCI CYCGRG 2 cut(s) 495, 1042
BslI CCNNNNNNNGG 5 cut(s) 151, 152, 617, 825, 1571
BsmAI GTCTC 3 cut(s) 1034, 1386, 1614
BsnI GGCC 3 cut(s) 5, 625, 837
BsoBI CYCGRG 2 cut(s) 495, 1042
Bsp119I TTCGAA 1 cut(s) 136
Bsp1286I GDGCHC 1 cut(s) 321
Bsp143I GATC 5 cut(s) 1093, 1308, 1321, 1327, 1492
BspACI CCGC 5 cut(s) 433, 695, 1343, 1541, 1648
BspANI GGCC 3 cut(s) 5, 625, 837
BspCNI CTCAG 5 cut(s) 19, 66, 1143, 1268, 1395
BspMAI CTGCAG 1 cut(s) 492
BspOI GCTAGC 1 cut(s) 1469
BspPI GGATC 3 cut(s) 1316, 1316, 1500
BspQI GCTCTTC 1 cut(s) 63
BspT104I TTCGAA 1 cut(s) 136
BsrDI GCAATG 1 cut(s) 1163
BsrI ACTGG 4 cut(s) 59, 351, 445, 1586
BssECI CCNNGG 1 cut(s) 494
BssMI GATC 5 cut(s) 1093, 1308, 1321, 1327, 1492
Bst2UI CCWGG 1 cut(s) 1566
Bst4CI ACNGT 1 cut(s) 302
Bst6I CTCTTC 4 cut(s) 63, 240, 444, 1185
BstBI TTCGAA 1 cut(s) 136
BstC8I GCNNGC 2 cut(s) 50, 1467
BstDEI CTNAG 5 cut(s) 27, 74, 1130, 1255, 1382
BstF5I GGATG 7 cut(s) 165, 593, 760, 815, 1058, 1178, 1599
BstH2I RGCGCY 3 cut(s) 566, 1109, 1414
BstHHI GCGC 3 cut(s) 565, 1108, 1413
BstKTI GATC 5 cut(s) 1096, 1311, 1324, 1330, 1495
BstMAI GTCTC 3 cut(s) 1034, 1386, 1614
BstMBI GATC 5 cut(s) 1093, 1308, 1321, 1327, 1492
BstMCI CGRYCG 1 cut(s) 1648
BstNI CCWGG 1 cut(s) 1566
BstPAI GACNNNNGTC 2 cut(s) 921, 1582
BstSCI CCNGG 1 cut(s) 1564
BstSFI CTRYAG 1 cut(s) 488
BstSLI GKGCMC 1 cut(s) 321
BstV1I GCAGC 5 cut(s) 213, 370, 474, 502, 1530
BstV2I GAAGAC 1 cut(s) 1130
BstX2I RGATCY 3 cut(s) 1308, 1321, 1327
BstXI CCANNNNNNTGG 2 cut(s) 208, 1120
BstYI RGATCY 3 cut(s) 1308, 1321, 1327
BsuRI GGCC 3 cut(s) 5, 625, 837
BtrI CACGTC 1 cut(s) 459
BtsCI GGATG 7 cut(s) 165, 593, 760, 815, 1058, 1178, 1599
BtsIMutI CAGTG 2 cut(s) 66, 1579
Cac8I GCNNGC 2 cut(s) 50, 1467
CaiI CAGNNNCTG 1 cut(s) 617
CfoI GCGC 3 cut(s) 565, 1108, 1413
Cfr13I GGNCC 1 cut(s) 1584
CsiI ACCWGGT 1 cut(s) 1564
Csp6I GTAC 1 cut(s) 369
CviAII CATG 4 cut(s) 147, 151, 208, 1120
CviQI GTAC 1 cut(s) 369
DdeI CTNAG 5 cut(s) 27, 74, 1130, 1255, 1382
DpnI GATC 5 cut(s) 1095, 1310, 1323, 1329, 1494
DpnII GATC 5 cut(s) 1093, 1308, 1321, 1327, 1492
EaeI YGGCCR 2 cut(s) 3, 623
Eam1104I CTCTTC 4 cut(s) 63, 240, 444, 1185
EarI CTCTTC 4 cut(s) 63, 240, 444, 1185
EciI GGCGGA 1 cut(s) 1332
Eco47I GGWCC 1 cut(s) 1584
Eco47III AGCGCT 2 cut(s) 564, 1107
Eco57I CTGAAG 3 cut(s) 357, 1124, 1427
Eco88I CYCGRG 2 cut(s) 495, 1042
EcoRII CCWGG 1 cut(s) 1564
EcoT22I ATGCAT 1 cut(s) 152
FaeI CATG 4 cut(s) 150, 154, 211, 1123
FalI AAGNNNNNCTT 2 cut(s) 326, 358
FatI CATG 4 cut(s) 146, 150, 207, 1119
FbaI TGATCA 1 cut(s) 1093
Fnu4HI GCNGC 5 cut(s) 227, 359, 488, 491, 1544
FokI GGATG 7 cut(s) 152, 600, 767, 802, 1045, 1165, 1586
Fsp4HI GCNGC 5 cut(s) 227, 359, 488, 491, 1544
FspBI CTAG 4 cut(s) 635, 767, 1187, 1466
GlaI GCGC 3 cut(s) 564, 1107, 1412
GluI GCNGC 5 cut(s) 227, 359, 488, 491, 1544
GsaI CCCAGC 1 cut(s) 762
GsuI CTGGAG 2 cut(s) 368, 800
HaeII RGCGCY 3 cut(s) 566, 1109, 1414
HaeIII GGCC 3 cut(s) 5, 625, 837
HhaI GCGC 3 cut(s) 565, 1108, 1413
Hin1II CATG 4 cut(s) 150, 154, 211, 1123
Hin6I GCGC 3 cut(s) 563, 1106, 1411
HinP1I GCGC 3 cut(s) 563, 1106, 1411
HincII GTYRAC 1 cut(s) 456
HindII GTYRAC 1 cut(s) 456
HindIII AAGCTT 1 cut(s) 419
HinfI GANTC 9 cut(s) 212, 384, 530, 638, 653, 685, 890, 1284, 1436
HphI GGTGA 2 cut(s) 1262, 1279
Hpy166II GTNNAC 3 cut(s) 319, 456, 881
Hpy8I GTNNAC 3 cut(s) 319, 456, 881
Hpy99I CGWCG 1 cut(s) 302
HpyAV CCTTC 4 cut(s) 94, 318, 824, 1044
HpyCH4III ACNGT 1 cut(s) 302
HpyCH4IV ACGT 2 cut(s) 458, 1608
HpyF3I CTNAG 5 cut(s) 27, 74, 1130, 1255, 1382
HpySE526I ACGT 2 cut(s) 458, 1608
Hsp92II CATG 4 cut(s) 150, 154, 211, 1123
HspAI GCGC 3 cut(s) 563, 1106, 1411
Ksp22I TGATCA 1 cut(s) 1093
Kzo9I GATC 5 cut(s) 1093, 1308, 1321, 1327, 1492
LguI GCTCTTC 1 cut(s) 63
LmnI GCTCC 2 cut(s) 763, 1113
Lsp1109I GCAGC 5 cut(s) 213, 370, 474, 502, 1530
LweI GCATC 7 cut(s) 303, 578, 745, 815, 1187, 1478, 1533
MabI ACCWGGT 1 cut(s) 1564
MaeI CTAG 4 cut(s) 635, 767, 1187, 1466
MaeII ACGT 2 cut(s) 458, 1608
MalI GATC 5 cut(s) 1095, 1310, 1323, 1329, 1494
MboI GATC 5 cut(s) 1093, 1308, 1321, 1327, 1492
MboII GAAGA 9 cut(s) 80, 140, 257, 272, 461, 720, 989, 1130, 1202
MfeI CAATTG 3 cut(s) 261, 884, 1087
MflI RGATCY 3 cut(s) 1308, 1321, 1327
MhlI GDGCHC 1 cut(s) 321
MlsI TGGCCA 2 cut(s) 5, 625
MluNI TGGCCA 2 cut(s) 5, 625
MlyI GAGTC 4 cut(s) 378, 662, 899, 1278
MmeI TCCRAC 5 cut(s) 45, 768, 1080, 1086, 1597
Mox20I TGGCCA 2 cut(s) 5, 625
Mph1103I ATGCAT 1 cut(s) 152
MroXI GAANNNNTTC 2 cut(s) 132, 933
MscI TGGCCA 2 cut(s) 5, 625
MseI TTAA 8 cut(s) 333, 339, 581, 668, 1007, 1296, 1377, 1530
MslI CAYNNNNRTG 1 cut(s) 282
Msp20I TGGCCA 2 cut(s) 5, 625
MspA1I CMGCKG 3 cut(s) 1134, 1543, 1650
MspR9I CCNGG 1 cut(s) 1566
MunI CAATTG 3 cut(s) 261, 884, 1087
MvaI CCWGG 1 cut(s) 1566
NdeII GATC 5 cut(s) 1093, 1308, 1321, 1327, 1492
NheI GCTAGC 1 cut(s) 1465
NlaIII CATG 4 cut(s) 150, 154, 211, 1123
NsiI ATGCAT 1 cut(s) 152
NspV TTCGAA 1 cut(s) 136
PciSI GCTCTTC 1 cut(s) 63
PdmI GAANNNNTTC 2 cut(s) 132, 933
PfeI GAWTC 5 cut(s) 212, 530, 638, 685, 1436
PflMI CCANNNNNTGG 1 cut(s) 617
PkrI GCNGC 5 cut(s) 228, 360, 489, 492, 1545
PleI GAGTC 4 cut(s) 378, 661, 898, 1278
PpsI GAGTC 4 cut(s) 378, 661, 898, 1278
PshAI GACNNNNGTC 2 cut(s) 921, 1582
PsiI TTATAA 2 cut(s) 273, 1013
Psp6I CCWGG 1 cut(s) 1564
PspFI CCCAGC 1 cut(s) 758
PspGI CCWGG 1 cut(s) 1564
PspPI GGNCC 1 cut(s) 1584
PstI CTGCAG 1 cut(s) 492
PstNI CAGNNNCTG 1 cut(s) 617
PsuI RGATCY 3 cut(s) 1308, 1321, 1327
PvuII CAGCTG 1 cut(s) 1134
RsaI GTAC 1 cut(s) 370
RsaNI GTAC 1 cut(s) 369
RseI CAYNNNNRTG 1 cut(s) 282
SapI GCTCTTC 1 cut(s) 63
SaqAI TTAA 8 cut(s) 333, 339, 581, 668, 1007, 1296, 1377, 1530
SatI GCNGC 5 cut(s) 227, 359, 488, 491, 1544
Sau3AI GATC 5 cut(s) 1093, 1308, 1321, 1327, 1492
Sau96I GGNCC 1 cut(s) 1584
ScaI AGTACT 1 cut(s) 370
SchI GAGTC 4 cut(s) 378, 662, 899, 1278
ScrFI CCNGG 1 cut(s) 1566
SduI GDGCHC 1 cut(s) 321
SexAI ACCWGGT 1 cut(s) 1564
SfaNI GCATC 7 cut(s) 303, 578, 745, 815, 1187, 1478, 1533
SfcI CTRYAG 1 cut(s) 488
SfuI TTCGAA 1 cut(s) 136
SinI GGWCC 1 cut(s) 1584
SmiMI CAYNNNNRTG 1 cut(s) 282
SmlI CTYRAG 2 cut(s) 566, 854
SmoI CTYRAG 2 cut(s) 566, 854
SsiI CCGC 5 cut(s) 433, 695, 1343, 1541, 1648
SspI AATATT 1 cut(s) 508
SspMI CTAG 4 cut(s) 635, 767, 1187, 1466
StyD4I CCNGG 1 cut(s) 1564
TaaI ACNGT 1 cut(s) 302
TaiI ACGT 2 cut(s) 461, 1611
TaqI TCGA 3 cut(s) 81, 136, 297
TatI WGTACW 1 cut(s) 368
TfiI GAWTC 5 cut(s) 212, 530, 638, 685, 1436
Tru1I TTAA 8 cut(s) 333, 339, 581, 668, 1007, 1296, 1377, 1530
Tru9I TTAA 8 cut(s) 333, 339, 581, 668, 1007, 1296, 1377, 1530
TscAI CASTG 2 cut(s) 66, 1586
TseI GCWGC 5 cut(s) 226, 358, 487, 490, 1543
TspDTI ATGAA 6 cut(s) 141, 154, 204, 353, 391, 1244
TspGWI ACGGA 1 cut(s) 158
TspRI CASTG 2 cut(s) 66, 1586
Van91I CCANNNNNTGG 1 cut(s) 617
VneI GTGCAC 1 cut(s) 317
VpaK11BI GGWCC 1 cut(s) 1584
XapI RAATTY 3 cut(s) 132, 138, 733
XbaI TCTAGA 2 cut(s) 634, 1186
XcmI CCANNNNNNNNNTGG 1 cut(s) 618
XmnI GAANNNNTTC 2 cut(s) 132, 933
XspI CTAG 4 cut(s) 635, 767, 1187, 1466
ZrmI AGTACT 1 cut(s) 370
Zsp2I ATGCAT 1 cut(s) 152
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.