Rmu_sc0009236.1_g000009

disease resistance

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0009236.1
OG0000070
Physical Location & Seq
Forward (+)
49666 .. 51867
2202 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0009236.1_g000009.1.cds

Sequence Viewer

Length: 2202 bp
atgaggaatctagtaaatttgcgtcacctcatgaattcgtatacatcttcattggaagaaatgcctcctcagcttggtcgattgactaatctccaaacattgcctaattttgttattggcaaaggtagtggatcaggagtaagagagattgggtcattgttgcatctgcaagggaaattgcacctctcgagactagagaatgtggcttgtgtcgaggatgctagaagtgccagcttaaagagcaaggaggggcttgaagctctgtttctttcgtggtcttcttcaagtgactcaacagaaattgcaaaccatgtgcttgacatgttacaacctcataccaaactcaaagagctcaccatccaaggttatgccggattgaaattttcaacatggattggagacccttcattctctaatatggtgcgtgtaaggttagaaggttgtcatcattgtcaattcttgccaccattcggacagttgcattctctcaaagaactttatataaaaagaatggatgcagtggaaagtgttggtattgagttttatggagaaggtaacttgctgtttcaagctttagagacccttgagtttcagaaactgaaaaattggaagaagtggtctgcttgccaacaaaatgagggggttgtggttttctcttgcctgaaaaagctttccatcagcgactgccccaaattggagggtagtttaccggagaagcttgattcattagcacagcttcagatatctaaatgtgaggaattggtggtttcattatccaattataaacagcttcatgattcaaacatcaacaattgcaagatggtggtttacgacacaagtccagttctcttggacttactagagaggttgacattttcaaatgtttcagagctgagattcgaaagagaggcgttcatgaaaagcttgaaaaatgttaaagagttggagattactggttgtgaggagctgacatgttcctttcagaatgaggatagattactgcaacatttgatttctcttggtcgtttgtgtattgaagacaactctgcccttgttgaaaagctagggaaagaagcagagcagttggtgcaattgcaaatactggattgcaagattgaacgtctggaattaagcgagtgtggaagccttctgaaggtaccagaaggattttatcaccttacatctcttcaagagcttcacataaatggatgttcaagtcttgtttcttttccggatgttagtctgccaccttgtcttaaattcatagagattcagaactgcgattctctgttgcactttgcaaaataccagattcctccaagcctaaaaagaatagagattggggaatgtgagaaattgaaatcattgatagagaaagaggaggtggtggtggatggttcttgttcgtcttattgtctcgagtatttgatcatagaggactgtccatctttgttgtttttattatgcaaaggccaattacgcagatctcttaaacaactttggatacatgattgtagacagctggagtcaataagtgagaggttcctcgatgacacctgtcaactcgaacgaattgacatctggcagtgcccaaaccttaaatccttacctgagggactgtgccacctcaccaatcttcagtcattatctatcggagattgtaagaaattggaggtggcgcacttgctgagagacatgatgcacactgagatattgaagattgattactgtgaaggtttgactactacttcctttccccccaacctaacatcactttcaatttggaagatcaagaattgtaaggcgctgatggaatctcaagggttgcacagacttgcctctttgagagaattgcggatctacggtggtggagatgatcgacgtctggtgtcctttccacctggtgagaattcgaaggagaaggagatgctgctcctcagatctcttgttgaattggaaattggaagcttcccaaatctaaagaaactgagcaagggctttcaattcctcacctctcttgaacgtctccttatcgaccaatgtccgaagcttacaaccattccaaaggagggcctgcctctttcacttactaaactttggattgatgggtgttcacctctacttgaagagagatgcaaaggacgataccggcccaagatagcacacatcccttgcgtacgaattgatggctcctcgatctag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04014 map04014
Pfam Domains
Protein Families
NB-ARC

Protein Analysis

733

Amino Acids

83.02

Weight (kDa)

6.08

Isoelectric Point (pI)

48.48

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000070)

Species Orthologous Gene IDs
fragaria_vesca FvH4_7g00360 FvH4_7g00850 FvH4_7g02400 FvH4_7g02430 FvH4_7g02450 FvH4_7g25671 FvH4_7g25680 FvH4_7g25683 FvH4_7g26980 FvH4_7g27330 FvH4_7g27355 FvH4_7g27610 FvH4_7g27642 FvH4_7g27890 FvH4_7g27891 FvH4_7g27891 FvH4_7g27891 FvH4_7g28110 FvH4_7g28390
malus_domestica MD00G1070800.v1.1 MD00G1168000.v1.1 MD00G1168300.v1.1 MD00G1168700.v1.1 MD02G1293100.v1.1 MD02G1293200.v1.1 MD02G1314300.v1.1 MD03G1009000.v1.1 MD03G1009400.v1.1 MD03G1042300.v1.1 MD03G1042400.v1.1 MD07G1033600.v1.1 MD07G1033700.v1.1 MD07G1033900.v1.1 MD11G1011400.v1.1 MD11G1011700.v1.1 MD11G1029800.v1.1 MD11G1029900.v1.1 MD11G1030300.v1.1 MD11G1030400.v1.1 MD11G1030500.v1.1 MD11G1031300.v1.1 MD11G1031600.v1.1 MD11G1032000.v1.1 MD11G1033200.v1.1 MD11G1033600.v1.1 MD11G1033800.v1.1 MD11G1033900.v1.1 MD11G1034100.v1.1 MD11G1034400.v1.1 MD11G1040600.v1.1 MD11G1041100.v1.1 MD11G1043100.v1.1 MD11G1043500.v1.1 MD11G1044500.v1.1 MD11G1045100.v1.1 MD11G1045600.v1.1
prunus_persica Prupe.2G022400_v2.0.a1 Prupe.2G022400_v2.0.a1 Prupe.2G022400_v2.0.a1 Prupe.2G022500_v2.0.a1 Prupe.2G022500_v2.0.a1 Prupe.2G022900_v2.0.a1 Prupe.2G023500_v2.0.a1 Prupe.2G023500_v2.0.a1 Prupe.2G023500_v2.0.a1 Prupe.2G023500_v2.0.a1 Prupe.2G023500_v2.0.a1 Prupe.2G023500_v2.0.a1 Prupe.2G023600_v2.0.a1 Prupe.2G028000_v2.0.a1 Prupe.2G030200_v2.0.a1 Prupe.2G067600_v2.0.a1 Prupe.8G117900_v2.0.a1
pyrus_communis pycom02g26350 pycom03g03270 pycom07g02370 pycom11g00750 pycom11g00790 pycom11g02340 pycom11g02370 pycom11g02380 pycom11g02390 pycom11g02410 pycom11g02460 pycom11g02470 pycom11g02500 pycom11g02510 pycom11g02520 pycom11g02530 pycom11g02580 pycom11g02590 pycom11g02680 pycom11g02710 pycom11g02720 pycom11g02730 pycom11g02750 pycom11g02760 pycom11g02770 pycom11g03690 pycom13g25120 pycom13g25130 pycom13g25140 pycom13g25170 pycom13g25180 pycom13g25190 pycom13g25210
rosa_chinensis RchiOBHm_Chr1g0315001 RchiOBHm_Chr1g0315411 RchiOBHm_Chr1g0317951 RchiOBHm_Chr1g0319741 RchiOBHm_Chr1g0319841 RchiOBHm_Chr1g0319911 RchiOBHm_Chr1g0319991 RchiOBHm_Chr1g0320001 RchiOBHm_Chr1g0320021 RchiOBHm_Chr1g0320081 RchiOBHm_Chr1g0320111 RchiOBHm_Chr1g0320131 RchiOBHm_Chr1g0320161 RchiOBHm_Chr1g0320171 RchiOBHm_Chr1g0320241 RchiOBHm_Chr1g0320281 RchiOBHm_Chr1g0320411 RchiOBHm_Chr1g0320461 RchiOBHm_Chr1g0320551 RchiOBHm_Chr1g0320581 RchiOBHm_Chr1g0320661 RchiOBHm_Chr1g0320891 RchiOBHm_Chr1g0320971 RchiOBHm_Chr1g0321021 RchiOBHm_Chr1g0321031 RchiOBHm_Chr1g0321091 RchiOBHm_Chr1g0321351 RchiOBHm_Chr1g0321481 RchiOBHm_Chr1g0321491 RchiOBHm_Chr1g0327521 RchiOBHm_Chr1g0328061 RchiOBHm_Chr1g0334991 RchiOBHm_Chr1g0373781 RchiOBHm_Chr1g0373891 RchiOBHm_Chr1g0374841 RchiOBHm_Chr2g0131111 RchiOBHm_Chr2g0131121 RchiOBHm_Chr4g0408901 RchiOBHm_Chr5g0041691 RchiOBHm_Chr7g0237021
rosa_laevigata RLG00000019168 RLG00000030456 RLG00000030460 RLG00000030571
rosa_multiflora Rmu_co7963468.1_g000001 Rmu_co7991248.1_g000001 Rmu_co8195256.1_g000001 Rmu_co8312199.1_g000001 Rmu_co8349215.1_g000001 Rmu_co8351041.1_g000001 Rmu_co8422719.1_g000001 Rmu_co8450711.1_g000001 Rmu_co8465555.1_g000001 Rmu_co8489965.1_g000001 Rmu_sc0000087.1_g000014 Rmu_sc0000272.1_g000015 Rmu_sc0000724.1_g000006 Rmu_sc0000724.1_g000021 Rmu_sc0000724.1_g000022 Rmu_sc0000861.1_g000024 Rmu_sc0001049.1_g000006 Rmu_sc0001049.1_g000007 Rmu_sc0001512.1_g000001 Rmu_sc0002022.1_g000004 Rmu_sc0002063.1_g000011 Rmu_sc0002131.1_g000024 Rmu_sc0002337.1_g000012 Rmu_sc0002341.1_g000005 Rmu_sc0002539.1_g000117 Rmu_sc0002745.1_g000005 Rmu_sc0002745.1_g000006 Rmu_sc0003145.1_g000002 Rmu_sc0003199.1_g000007 Rmu_sc0003270.1_g000039 Rmu_sc0003270.1_g000040 Rmu_sc0003423.1_g000001 Rmu_sc0003423.1_g000002 Rmu_sc0003629.1_g000067 Rmu_sc0004039.1_g000002 Rmu_sc0004555.1_g000001 Rmu_sc0004555.1_g000005 Rmu_sc0004555.1_g000006 Rmu_sc0004947.1_g000025 Rmu_sc0004947.1_g000026 Rmu_sc0005255.1_g000025 Rmu_sc0007977.1_g000016 Rmu_sc0008752.1_g000005 Rmu_sc0009236.1_g000004 Rmu_sc0009236.1_g000008 Rmu_sc0009236.1_g000009 Rmu_sc0009236.1_g000010 Rmu_sc0011424.1_g000036 Rmu_sc0013413.1_g000001 Rmu_sc0013735.1_g000002 Rmu_sc0015304.1_g000002 Rmu_sc0015304.1_g000003 Rmu_sc0015585.1_g000001 Rmu_sc0018410.1_g000001 Rmu_sc0022723.1_g000001 Rmu_sc0022723.1_g000002 Rmu_sc0022724.1_g000001 Rmu_sc0023430.1_g000001 Rmu_sc0026053.1_g000001 Rmu_sc0026429.1_g000002 Rmu_sc0026647.1_g000001 Rmu_sc0031359.1_g000001 Rmu_ssc0000042.1_g000040 Rmu_ssc0000081.1_g000001 Rmu_ssc0000300.1_g000011
rosa_roxburghii Rroxscaffold_160G00433620 Rroxscaffold_160G00433990 Rroxscaffold_1G00038820 Rroxscaffold_2G00113190 Rroxscaffold_4G00283240 Rroxscaffold_4G00283930 Rroxscaffold_4G00284010 Rroxscaffold_4G00322600 Rroxscaffold_4G00327710 Rroxscaffold_4G00328100 Rroxscaffold_4G00328130 Rroxscaffold_4G00331590 Rroxscaffold_5G00353280
rosa_rugosa Rorug01G0004200 Rorug01G0018800 Rorug01G0018900 Rorug01G0029900 Rorug01G0030000 Rorug01G0030000 Rorug01G0030000 Rorug01G0030200 Rorug01G0030300 Rorug01G0030800 Rorug01G0032400 Rorug01G0032900 Rorug01G0055800 Rorug01G0067600 Rorug01G0067700 Rorug01G0067800 Rorug01G0067900 Rorug01G0068000 Rorug01G0379500 Rorug01G0379600 Rorug01G0379600 Rorug01G0385200 Rorug01G0385300 Rorug02G0295100 Rorug04G0088500 Rorug04G0088600 Rorug05G0194900 Rorug07G0301400
rosa_samantha Rh1AG014800 Rh1AG015200 Rh1AG030500 Rh1AG041800 Rh1AG042300 Rh1AG042700 Rh1AG042800 Rh1AG042900 Rh1AG045000 Rh1AG085100 Rh1AG085200 Rh1AG388600 Rh1AG396700 Rh1AG396900 Rh1BG007300 Rh1BG039200 Rh1BG039600 Rh1BG042800 Rh1BG067300 Rh1BG109700 Rh1BG109900 Rh1BG354000 Rh1CG043800 Rh1CG044400 Rh1DG008600 Rh1DG022900 Rh1DG023400 Rh1DG023600 Rh1DG023900 Rh1DG024100 Rh1DG024400 Rh1DG024500 Rh1DG025500 Rh1DG025700 Rh1DG026500 Rh1DG026800 Rh1DG038900 Rh1DG048800 Rh1DG049300 Rh1DG051700 Rh1DG052000 Rh1DG146200 Rh1DG383500 Rh2BG354900 Rh2CG333600 Rh4BG149600 Rh4BG149700 Rh4CG160600
rosa_wichuraiana Rw0G001100 Rw0G001130 Rw0G001180 Rw0G012580 Rw1G003480 Rw1G003540 Rw1G003600 Rw1G003640 Rw1G003670 Rw1G003750 Rw1G003940 Rw1G006650 Rw1G034550 Rw1G034560 Rw1G034650 Rw1G034660 Rw1G035170 Rw1G035190 Rw1G037060 Rw2G028210 Rw4G012540 Rw5G026370 Rw7G037900

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 783
AatII GACGTC 1 cut(s) 1885
Acc65I GGTACC 1 cut(s) 1156
AccB1I GGYRCC 1 cut(s) 1156
AccI GTMKAC 2 cut(s) 41, 1516
AccIII TCCGGA 1 cut(s) 1231
AciI CCGC 1 cut(s) 1855
AclWI GGATC 2 cut(s) 139, 1865
AcsI RAATTY 5 cut(s) 16, 34, 380, 1259, 1909
AcuI CTGAAG 3 cut(s) 722, 1172, 1622
AcyI GRCGYC 1 cut(s) 1882
AdeI CACNNNGTG 1 cut(s) 1904
AfaI GTAC 2 cut(s) 1158, 2178
AfiI CCNNNNNNNGG 5 cut(s) 74, 470, 694, 1153, 2069
AflIII ACRYGT 2 cut(s) 321, 971
AjnI CCWGG 1 cut(s) 1900
AjuI GAANNNNNNNTTGG 2 cut(s) 1944, 1976
Alw21I GWGCWC 1 cut(s) 354
Alw26I GTCTC 6 cut(s) 184, 393, 572, 1421, 1686, 2030
AlwI GGATC 2 cut(s) 139, 1865
AlwNI CAGNNNCTG 2 cut(s) 598, 684
Ama87I CYCGRG 2 cut(s) 187, 1418
Aor13HI TCCGGA 1 cut(s) 1231
AoxI GGCC 3 cut(s) 1471, 2071, 2150
ApeKI GCWGC 1 cut(s) 1930
ApoI RAATTY 5 cut(s) 16, 34, 380, 1259, 1909
Asp718I GGTACC 1 cut(s) 1156
AspLEI GCGC 2 cut(s) 1681, 1807
AspS9I GGNCC 2 cut(s) 2071, 2151
AsuHPI GGTGA 7 cut(s) 17, 346, 1166, 1621, 1916, 2002, 2106
AsuII TTCGAA 2 cut(s) 900, 1913
AvaI CYCGRG 2 cut(s) 187, 1418
AxyI CCTNAGG 1 cut(s) 1611
BaeGI GKGCMC 1 cut(s) 1592
BanI GGYRCC 1 cut(s) 1156
BanII GRGCYC 1 cut(s) 354
BarI GAAGNNNNNNTAC 2 cut(s) 1709, 1741
BbsI GAAGAC 2 cut(s) 270, 1044
Bbv12I GWGCWC 1 cut(s) 354
BbvCI CCTCAGC 1 cut(s) 69
BbvI GCAGC 1 cut(s) 1917
BccI CCATC 8 cut(s) 365, 683, 814, 1388, 1453, 1804, 2099, 2180
BciT130I CCWGG 1 cut(s) 1902
BciVI GTATCC 1 cut(s) 1497
BclI TGATCA 1 cut(s) 1428
BcoDI GTCTC 6 cut(s) 184, 393, 572, 1421, 1686, 2030
BfaI CTAG 6 cut(s) 11, 194, 222, 860, 1064, 2200
BfoI RGCGCY 1 cut(s) 1808
BfuI GTATCC 1 cut(s) 1497
BglII AGATCT 2 cut(s) 1484, 1940
BisI GCNGC 1 cut(s) 1931
BlsI GCNGC 1 cut(s) 1932
Bme1390I CCNGG 1 cut(s) 1902
BmeT110I CYCGRG 2 cut(s) 187, 1418
BmgT120I GGNCC 2 cut(s) 2071, 2151
BmiI GGNNCC 3 cut(s) 1158, 1544, 2191
BmrFI CCNGG 1 cut(s) 1902
BmsI GCATC 6 cut(s) 172, 208, 505, 1689, 1917, 2123
BoxI GACNNNNGTC 3 cut(s) 837, 1557, 2040
BpiI GAAGAC 2 cut(s) 270, 1044
BpmI CTGGAG 1 cut(s) 1544
Bpu10I CCTNAGC 1 cut(s) 69
Bpu14I TTCGAA 2 cut(s) 900, 1913
BpuEI CTTGAG 2 cut(s) 605, 1803
BsaHI GRCGYC 1 cut(s) 1882
BsaI GGTCTC 2 cut(s) 393, 572
BsaJI CCNNGG 1 cut(s) 361
BsaWI WCCGGW 2 cut(s) 709, 1231
Bsc4I CCNNNNNNNGG 5 cut(s) 74, 470, 694, 1153, 2069
Bse118I RCCGGY 1 cut(s) 2148
Bse1I ACTGG 3 cut(s) 842, 958, 1107
Bse21I CCTNAGG 1 cut(s) 1611
Bse3DI GCAATG 1 cut(s) 98
BseAI TCCGGA 1 cut(s) 1231
BseBI CCWGG 1 cut(s) 1902
BseDI CCNNGG 1 cut(s) 361
BseGI GGATG 7 cut(s) 223, 357, 520, 1214, 1240, 1399, 2166
BseLI CCNNNNNNNGG 5 cut(s) 74, 470, 694, 1153, 2069
BseMI GCAATG 1 cut(s) 98
BseMII CTCAG 7 cut(s) 83, 884, 1602, 1679, 1698, 1951, 1979
BseNI ACTGG 3 cut(s) 842, 958, 1107
BseRI GAGGAG 5 cut(s) 57, 977, 1394, 1925, 2182
BseSI GKGCMC 1 cut(s) 1592
BseXI GCAGC 1 cut(s) 1917
BshFI GGCC 3 cut(s) 1473, 2073, 2152
BshNI GGYRCC 1 cut(s) 1156
BsiHKAI GWGCWC 1 cut(s) 354
BsiHKCI CYCGRG 2 cut(s) 187, 1418
BsiSI CCGG 4 cut(s) 372, 710, 1232, 2149
BsiWI CGTACG 1 cut(s) 2176
BslFI GGGAC 1 cut(s) 1629
BslI CCNNNNNNNGG 5 cut(s) 74, 470, 694, 1153, 2069
BsmAI GTCTC 6 cut(s) 184, 393, 572, 1421, 1686, 2030
BsmBI CGTCTC 1 cut(s) 2030
BsmFI GGGAC 1 cut(s) 1629
BsmI GAATGC 1 cut(s) 481
BsnI GGCC 3 cut(s) 1473, 2073, 2152
Bso31I GGTCTC 2 cut(s) 393, 572
BsoBI CYCGRG 2 cut(s) 187, 1418
Bsp119I TTCGAA 2 cut(s) 900, 1913
Bsp1286I GDGCHC 2 cut(s) 354, 1592
Bsp13I TCCGGA 1 cut(s) 1231
Bsp143I GATC 8 cut(s) 131, 1428, 1484, 1788, 1857, 1876, 1940, 2196
BspACI CCGC 1 cut(s) 1855
BspANI GGCC 3 cut(s) 1473, 2073, 2152
BspCNI CTCAG 7 cut(s) 82, 885, 1603, 1680, 1699, 1950, 1980
BspEI TCCGGA 1 cut(s) 1231
BspHI TCATGA 3 cut(s) 30, 793, 915
BspLI GGNNCC 3 cut(s) 1158, 1544, 2191
BspPI GGATC 2 cut(s) 139, 1865
BspT104I TTCGAA 2 cut(s) 900, 1913
BspT107I GGYRCC 1 cut(s) 1156
BspTNI GGTCTC 2 cut(s) 393, 572
BsrDI GCAATG 1 cut(s) 98
BsrFI RCCGGY 1 cut(s) 2148
BsrI ACTGG 3 cut(s) 842, 958, 1107
BssAI RCCGGY 1 cut(s) 2148
BssECI CCNNGG 1 cut(s) 361
BssMI GATC 8 cut(s) 131, 1428, 1484, 1788, 1857, 1876, 1940, 2196
BssNAI GTATAC 1 cut(s) 42
BssNI GRCGYC 1 cut(s) 1882
BssT1I CCWWGG 1 cut(s) 361
Bst1107I GTATAC 1 cut(s) 42
Bst2UI CCWGG 1 cut(s) 1902
Bst4CI ACNGT 5 cut(s) 477, 1442, 1620, 1730, 1865
Bst6I CTCTTC 2 cut(s) 1191, 2121
BstACI GRCGYC 1 cut(s) 1882
BstAPI GCANNNNNTGC 1 cut(s) 1087
BstBI TTCGAA 2 cut(s) 900, 1913
BstC8I GCNNGC 3 cut(s) 232, 625, 2075
BstDEI CTNAG 7 cut(s) 69, 893, 1611, 1688, 1707, 1937, 1988
BstENI CCTNNNNNAGG 1 cut(s) 1151
BstF5I GGATG 7 cut(s) 223, 357, 520, 1214, 1240, 1399, 2166
BstH2I RGCGCY 1 cut(s) 1808
BstHHI GCGC 2 cut(s) 1681, 1807
BstKTI GATC 8 cut(s) 134, 1431, 1487, 1791, 1860, 1879, 1943, 2199
BstMAI GTCTC 6 cut(s) 184, 393, 572, 1421, 1686, 2030
BstMBI GATC 8 cut(s) 131, 1428, 1484, 1788, 1857, 1876, 1940, 2196
BstMWI GCNNNNNNNGC 5 cut(s) 70, 227, 240, 1087, 1479
BstNI CCWGG 1 cut(s) 1902
BstNSI RCATGY 2 cut(s) 325, 975
BstPAI GACNNNNGTC 3 cut(s) 837, 1557, 2040
BstSCI CCNGG 1 cut(s) 1900
BstSLI GKGCMC 1 cut(s) 1592
BstV1I GCAGC 1 cut(s) 1917
BstV2I GAAGAC 2 cut(s) 270, 1044
BstX2I RGATCY 3 cut(s) 1484, 1857, 1940
BstYI RGATCY 3 cut(s) 1484, 1857, 1940
BstZ17I GTATAC 1 cut(s) 42
Bsu36I CCTNAGG 1 cut(s) 1611
BsuI GTATCC 1 cut(s) 1497
BsuRI GGCC 3 cut(s) 1473, 2073, 2152
BtsCI GGATG 7 cut(s) 223, 357, 520, 1214, 1240, 1399, 2166
BtsI GCAGTG 2 cut(s) 525, 1592
BtsIMutI CAGTG 3 cut(s) 525, 1592, 1704
Cac8I GCNNGC 3 cut(s) 232, 625, 2075
CaiI CAGNNNCTG 2 cut(s) 598, 684
CciI TCATGA 3 cut(s) 30, 793, 915
CfoI GCGC 2 cut(s) 1681, 1807
Cfr10I RCCGGY 1 cut(s) 2148
Cfr13I GGNCC 2 cut(s) 2071, 2151
CseI GACGC 1 cut(s) 11
CsiI ACCWGGT 1 cut(s) 1900
Csp6I GTAC 2 cut(s) 1157, 2177
CspCI CAANNNNNGTGG 2 cut(s) 109, 144
CviAII CATG 9 cut(s) 31, 311, 322, 390, 794, 916, 972, 1508, 1696
CviQI GTAC 2 cut(s) 1157, 2177
DdeI CTNAG 7 cut(s) 69, 893, 1611, 1688, 1707, 1937, 1988
DpnI GATC 8 cut(s) 133, 1430, 1486, 1790, 1859, 1878, 1942, 2198
DpnII GATC 8 cut(s) 131, 1428, 1484, 1788, 1857, 1876, 1940, 2196
DraIII CACNNNGTG 1 cut(s) 1904
Eam1104I CTCTTC 2 cut(s) 1191, 2121
EarI CTCTTC 2 cut(s) 1191, 2121
Ecl136II GAGCTC 1 cut(s) 352
Eco130I CCWWGG 1 cut(s) 361
Eco24I GRGCYC 1 cut(s) 354
Eco31I GGTCTC 2 cut(s) 393, 572
Eco32I GATATC 1 cut(s) 744
Eco53kI GAGCTC 1 cut(s) 352
Eco57I CTGAAG 3 cut(s) 722, 1172, 1622
Eco81I CCTNAGG 1 cut(s) 1611
Eco88I CYCGRG 2 cut(s) 187, 1418
EcoICRI GAGCTC 1 cut(s) 352
EcoNI CCTNNNNNAGG 1 cut(s) 1151
EcoO109I RGGNCCY 1 cut(s) 2071
EcoRI GAATTC 2 cut(s) 34, 1909
EcoRII CCWGG 1 cut(s) 1900
EcoRV GATATC 1 cut(s) 744
EcoT14I CCWWGG 1 cut(s) 361
EcoT38I GRGCYC 1 cut(s) 354
ErhI CCWWGG 1 cut(s) 361
Esp3I CGTCTC 1 cut(s) 2030
FaeI CATG 9 cut(s) 34, 314, 325, 393, 797, 919, 975, 1511, 1699
FaqI GGGAC 1 cut(s) 1629
FatI CATG 9 cut(s) 30, 310, 321, 389, 793, 915, 971, 1507, 1695
FbaI TGATCA 1 cut(s) 1428
FblI GTMKAC 2 cut(s) 41, 1516
Fnu4HI GCNGC 1 cut(s) 1931
FokI GGATG 7 cut(s) 230, 344, 527, 1221, 1247, 1406, 2153
FriOI GRGCYC 1 cut(s) 354
Fsp4HI GCNGC 1 cut(s) 1931
FspBI CTAG 6 cut(s) 11, 194, 222, 860, 1064, 2200
GlaI GCGC 2 cut(s) 1680, 1806
GluI GCNGC 1 cut(s) 1931
GsuI CTGGAG 1 cut(s) 1544
HaeII RGCGCY 1 cut(s) 1808
HaeIII GGCC 3 cut(s) 1473, 2073, 2152
HapII CCGG 4 cut(s) 372, 710, 1232, 2149
HgaI GACGC 1 cut(s) 11
HhaI GCGC 2 cut(s) 1681, 1807
Hin1I GRCGYC 1 cut(s) 1882
Hin1II CATG 9 cut(s) 34, 314, 325, 393, 797, 919, 975, 1511, 1699
Hin6I GCGC 2 cut(s) 1679, 1805
HinP1I GCGC 2 cut(s) 1679, 1805
HincII GTYRAC 2 cut(s) 870, 1562
HindII GTYRAC 2 cut(s) 870, 1562
HindIII AAGCTT 6 cut(s) 570, 668, 716, 922, 1966, 2048
HpaII CCGG 4 cut(s) 372, 710, 1232, 2149
HphI GGTGA 7 cut(s) 17, 346, 1166, 1621, 1916, 2002, 2106
Hpy166II GTNNAC 7 cut(s) 42, 707, 829, 870, 1517, 1562, 2114
Hpy8I GTNNAC 7 cut(s) 42, 707, 829, 870, 1517, 1562, 2114
Hpy99I CGWCG 1 cut(s) 1884
HpyAV CCTTC 9 cut(s) 414, 431, 545, 1147, 1157, 1157, 1727, 1909, 1915
HpyCH4III ACNGT 5 cut(s) 477, 1442, 1620, 1730, 1865
HpyCH4IV ACGT 3 cut(s) 1120, 1882, 2023
HpyF10VI GCNNNNNNNGC 5 cut(s) 70, 227, 240, 1087, 1479
HpyF3I CTNAG 7 cut(s) 69, 893, 1611, 1688, 1707, 1937, 1988
HpySE526I ACGT 3 cut(s) 1120, 1882, 2023
Hsp92I GRCGYC 1 cut(s) 1882
Hsp92II CATG 9 cut(s) 34, 314, 325, 393, 797, 919, 975, 1511, 1699
HspAI GCGC 2 cut(s) 1679, 1805
Kpn2I TCCGGA 1 cut(s) 1231
KpnI GGTACC 1 cut(s) 1160
Ksp22I TGATCA 1 cut(s) 1428
Kzo9I GATC 8 cut(s) 131, 1428, 1484, 1788, 1857, 1876, 1940, 2196
LmnI GCTCC 3 cut(s) 964, 1938, 2195
Lsp1109I GCAGC 1 cut(s) 1917
LweI GCATC 6 cut(s) 172, 208, 505, 1689, 1917, 2123
MabI ACCWGGT 1 cut(s) 1900
MaeI CTAG 6 cut(s) 11, 194, 222, 860, 1064, 2200
MaeII ACGT 3 cut(s) 1120, 1882, 2023
MaeIII GTNAC 4 cut(s) 23, 287, 324, 554
MalI GATC 8 cut(s) 133, 1430, 1486, 1790, 1859, 1878, 1942, 2198
MboI GATC 8 cut(s) 131, 1428, 1484, 1788, 1857, 1876, 1940, 2196
MfeI CAATTG 2 cut(s) 811, 1091
MflI RGATCY 3 cut(s) 1484, 1857, 1940
MhlI GDGCHC 2 cut(s) 354, 1592
MlyI GAGTC 2 cut(s) 284, 1535
MmeI TCCRAC 1 cut(s) 924
MroI TCCGGA 1 cut(s) 1231
MseI TTAA 6 cut(s) 236, 936, 1130, 1257, 1491, 1599
MslI CAYNNNNRTG 1 cut(s) 1203
MspA1I CMGCKG 1 cut(s) 1522
MspI CCGG 4 cut(s) 372, 710, 1232, 2149
MspR9I CCNGG 1 cut(s) 1902
MunI CAATTG 2 cut(s) 811, 1091
Mva1269I GAATGC 1 cut(s) 481
MvaI CCWGG 1 cut(s) 1902
MwoI GCNNNNNNNGC 5 cut(s) 70, 227, 240, 1087, 1479
NdeII GATC 8 cut(s) 131, 1428, 1484, 1788, 1857, 1876, 1940, 2196
NlaIII CATG 9 cut(s) 34, 314, 325, 393, 797, 919, 975, 1511, 1699
NlaIV GGNNCC 3 cut(s) 1158, 1544, 2191
NmuCI GTSAC 2 cut(s) 23, 287
NspI RCATGY 2 cut(s) 325, 975
NspV TTCGAA 2 cut(s) 900, 1913
PaeR7I CTCGAG 2 cut(s) 187, 1418
PagI TCATGA 3 cut(s) 30, 793, 915
PciI ACATGT 2 cut(s) 321, 971
PctI GAATGC 1 cut(s) 481
PfeI GAWTC 8 cut(s) 7, 722, 797, 897, 1270, 1283, 1312, 1814
Pfl23II CGTACG 1 cut(s) 2176
PkrI GCNGC 1 cut(s) 1932
PleI GAGTC 2 cut(s) 284, 1534
PpsI GAGTC 2 cut(s) 284, 1534
PscI ACATGT 2 cut(s) 321, 971
PshAI GACNNNNGTC 3 cut(s) 837, 1557, 2040
PsiI TTATAA 1 cut(s) 783
Psp124BI GAGCTC 1 cut(s) 354
Psp6I CCWGG 1 cut(s) 1900
PspGI CCWGG 1 cut(s) 1900
PspLI CGTACG 1 cut(s) 2176
PspN4I GGNNCC 3 cut(s) 1158, 1544, 2191
PspPI GGNCC 2 cut(s) 2071, 2151
PstNI CAGNNNCTG 2 cut(s) 598, 684
PsuI RGATCY 3 cut(s) 1484, 1857, 1940
PvuII CAGCTG 1 cut(s) 1522
RsaI GTAC 2 cut(s) 1158, 2178
RsaNI GTAC 2 cut(s) 1157, 2177
RseI CAYNNNNRTG 1 cut(s) 1203
SacI GAGCTC 1 cut(s) 354
SaqAI TTAA 6 cut(s) 236, 936, 1130, 1257, 1491, 1599
SatI GCNGC 1 cut(s) 1931
Sau3AI GATC 8 cut(s) 131, 1428, 1484, 1788, 1857, 1876, 1940, 2196
Sau96I GGNCC 2 cut(s) 2071, 2151
SchI GAGTC 2 cut(s) 284, 1535
ScrFI CCNGG 1 cut(s) 1902
SduI GDGCHC 2 cut(s) 354, 1592
SexAI ACCWGGT 1 cut(s) 1900
SfaNI GCATC 6 cut(s) 172, 208, 505, 1689, 1917, 2123
Sfr274I CTCGAG 2 cut(s) 187, 1418
SfuI TTCGAA 2 cut(s) 900, 1913
SlaI CTCGAG 2 cut(s) 187, 1418
SmiMI CAYNNNNRTG 1 cut(s) 1203
SmlI CTYRAG 4 cut(s) 187, 584, 1418, 1818
SmoI CTYRAG 4 cut(s) 187, 584, 1418, 1818
SsiI CCGC 1 cut(s) 1855
SspMI CTAG 6 cut(s) 11, 194, 222, 860, 1064, 2200
SstI GAGCTC 1 cut(s) 354
StyD4I CCNGG 1 cut(s) 1900
StyI CCWWGG 1 cut(s) 361
TaaI ACNGT 5 cut(s) 477, 1442, 1620, 1730, 1865
TaiI ACGT 3 cut(s) 1123, 1885, 2026
TfiI GAWTC 8 cut(s) 7, 722, 797, 897, 1270, 1283, 1312, 1814
Tru1I TTAA 6 cut(s) 236, 936, 1130, 1257, 1491, 1599
Tru9I TTAA 6 cut(s) 236, 936, 1130, 1257, 1491, 1599
TscAI CASTG 3 cut(s) 525, 1592, 1711
TseFI GTSAC 2 cut(s) 23, 287
TseI GCWGC 1 cut(s) 1930
Tsp45I GTSAC 2 cut(s) 23, 287
TspDTI ATGAA 9 cut(s) 39, 47, 396, 714, 759, 782, 904, 932, 1252
TspRI CASTG 3 cut(s) 525, 1592, 1711
XagI CCTNNNNNAGG 1 cut(s) 1151
XapI RAATTY 5 cut(s) 16, 34, 380, 1259, 1909
XceI RCATGY 2 cut(s) 325, 975
XhoI CTCGAG 2 cut(s) 187, 1418
XmiI GTMKAC 2 cut(s) 41, 1516
XspI CTAG 6 cut(s) 11, 194, 222, 860, 1064, 2200
ZraI GACGTC 1 cut(s) 1883
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.