MD03G1042400.v1.1

disease resistance

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr03
OG0000070
Physical Location & Seq
Reverse (-)
3324977 .. 3326204
1228 bp
Loading structure...
UTR
Exon/CDS
Intron
MD03G1042400.v1.1.491

Sequence Viewer

Length: 1140 bp
ATGCCTGGGGTGGGAAAGACAACACTTGCAAGACATGTTTTTTGTGATGATGCAATGAAAGATTTTAACCCAAAAGTATGGGTATCTGTGTCGGATGACTTCAATCTTGAAAGAGTGACAAAGGCAATTCTTGAATCTGCCACATCTGGTCCGATGGCCGAATTCAAGGAATTCAACAAGGTTCGAGAAAGTTCTCCTTTTCATGTTGGAGCATTAGGAAGTAAGATAGTTGTGACAACACGCGATGCAAATGTTGCAAAGATGATGGGTTCCACTGTCTATCAATTGGATTGCATATCAGATGATCAATGTTGGAAAGTCTTTGAGCATTATTCCCTCTTGGACATTACCAACAATAGGCCGCAAAATTTTGGGTTGGTTAAGAAGAAAATTGTTGCAAAATGCAGCGGATTGTCCTTGGCTGGAAGGACTCTTGGTGGTCTTCTACGCTGTAAACAAGTAGAAGAATGGGAGGAAATCTTAAACAAGAAGATGTGGAGTCTACCAGATAATAGTGGCATTCTCCCAGTATTAAAATTGAGCTATCACTATCTCCCTTCGAGTTTGAAACGATGCTTTGCCTATTGTTCCCTACTTCCGAATGACTATGAATTTGGGGAGAAGCAGTTGATCCTTCTATGGGTTGCAGAGGGTTTGGTTCAACAACAACCAGAGGACAAGAAACAATTTGAAGATACATGCAGTGATTATTTTCAAGAGCTATTGTCTAGGTCGTTATTTCAAAAGGCAAGCAAAGGCAATGACAAATATGTAATGCATGACCTTGTTGGTGAGTTGGCACGGTGGGCTGCAGCTGAAATATGCTTCTCACTGGAGGATAAGGGAAATGATGACTTACAACTTAAACTAGTTCTGATGGCTCGTCATATGTCTTATGTCAGTGGTGTGTATGATGGTGTTAAAAAATTTGAGGCCATCTCCAGAGTTAAACATTTGAGGACATTCCTACCGTTTTCACAATCTTGTGGAAACAATCTAACTCATACGGTTACATTTGACCTATTGCCAAAATTGCGAATCTTACAAGTGCTTTCACTGAATGGCTATGGAATAACTGAGCTGCCCAATTCTATTGGTAAATTGTGGAATCTACAGTATCTTGACCTTTCTTACACATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04014 map04014
Pfam Domains
Protein Families
NB-ARC

Protein Analysis

380

Amino Acids

42.93

Weight (kDa)

7.53

Isoelectric Point (pI)

43.52

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
NB-ARC PF00931 1 - 47 1e-06 NB-ARC domain
NB-ARC PF00931 66 - 111 6.4e-06 NB-ARC domain
WHD_DRP PF23559 199 - 267 1.3e-20 Disease resistance protein Winged helix domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000070)

Species Orthologous Gene IDs
fragaria_vesca FvH4_7g00360 FvH4_7g00850 FvH4_7g02400 FvH4_7g02430 FvH4_7g02450 FvH4_7g25671 FvH4_7g25680 FvH4_7g25683 FvH4_7g26980 FvH4_7g27330 FvH4_7g27355 FvH4_7g27610 FvH4_7g27642 FvH4_7g27890 FvH4_7g27891 FvH4_7g27891 FvH4_7g27891 FvH4_7g28110 FvH4_7g28390
malus_domestica MD00G1070800.v1.1 MD00G1168000.v1.1 MD00G1168300.v1.1 MD00G1168700.v1.1 MD02G1293100.v1.1 MD02G1293200.v1.1 MD02G1314300.v1.1 MD03G1009000.v1.1 MD03G1009400.v1.1 MD03G1042300.v1.1 MD03G1042400.v1.1 MD07G1033600.v1.1 MD07G1033700.v1.1 MD07G1033900.v1.1 MD11G1011400.v1.1 MD11G1011700.v1.1 MD11G1029800.v1.1 MD11G1029900.v1.1 MD11G1030300.v1.1 MD11G1030400.v1.1 MD11G1030500.v1.1 MD11G1031300.v1.1 MD11G1031600.v1.1 MD11G1032000.v1.1 MD11G1033200.v1.1 MD11G1033600.v1.1 MD11G1033800.v1.1 MD11G1033900.v1.1 MD11G1034100.v1.1 MD11G1034400.v1.1 MD11G1040600.v1.1 MD11G1041100.v1.1 MD11G1043100.v1.1 MD11G1043500.v1.1 MD11G1044500.v1.1 MD11G1045100.v1.1 MD11G1045600.v1.1
prunus_persica Prupe.2G022400_v2.0.a1 Prupe.2G022400_v2.0.a1 Prupe.2G022400_v2.0.a1 Prupe.2G022500_v2.0.a1 Prupe.2G022500_v2.0.a1 Prupe.2G022900_v2.0.a1 Prupe.2G023500_v2.0.a1 Prupe.2G023500_v2.0.a1 Prupe.2G023500_v2.0.a1 Prupe.2G023500_v2.0.a1 Prupe.2G023500_v2.0.a1 Prupe.2G023500_v2.0.a1 Prupe.2G023600_v2.0.a1 Prupe.2G028000_v2.0.a1 Prupe.2G030200_v2.0.a1 Prupe.2G067600_v2.0.a1 Prupe.8G117900_v2.0.a1
pyrus_communis pycom02g26350 pycom03g03270 pycom07g02370 pycom11g00750 pycom11g00790 pycom11g02340 pycom11g02370 pycom11g02380 pycom11g02390 pycom11g02410 pycom11g02460 pycom11g02470 pycom11g02500 pycom11g02510 pycom11g02520 pycom11g02530 pycom11g02580 pycom11g02590 pycom11g02680 pycom11g02710 pycom11g02720 pycom11g02730 pycom11g02750 pycom11g02760 pycom11g02770 pycom11g03690 pycom13g25120 pycom13g25130 pycom13g25140 pycom13g25170 pycom13g25180 pycom13g25190 pycom13g25210
rosa_chinensis RchiOBHm_Chr1g0315001 RchiOBHm_Chr1g0315411 RchiOBHm_Chr1g0317951 RchiOBHm_Chr1g0319741 RchiOBHm_Chr1g0319841 RchiOBHm_Chr1g0319911 RchiOBHm_Chr1g0319991 RchiOBHm_Chr1g0320001 RchiOBHm_Chr1g0320021 RchiOBHm_Chr1g0320081 RchiOBHm_Chr1g0320111 RchiOBHm_Chr1g0320131 RchiOBHm_Chr1g0320161 RchiOBHm_Chr1g0320171 RchiOBHm_Chr1g0320241 RchiOBHm_Chr1g0320281 RchiOBHm_Chr1g0320411 RchiOBHm_Chr1g0320461 RchiOBHm_Chr1g0320551 RchiOBHm_Chr1g0320581 RchiOBHm_Chr1g0320661 RchiOBHm_Chr1g0320891 RchiOBHm_Chr1g0320971 RchiOBHm_Chr1g0321021 RchiOBHm_Chr1g0321031 RchiOBHm_Chr1g0321091 RchiOBHm_Chr1g0321351 RchiOBHm_Chr1g0321481 RchiOBHm_Chr1g0321491 RchiOBHm_Chr1g0327521 RchiOBHm_Chr1g0328061 RchiOBHm_Chr1g0334991 RchiOBHm_Chr1g0373781 RchiOBHm_Chr1g0373891 RchiOBHm_Chr1g0374841 RchiOBHm_Chr2g0131111 RchiOBHm_Chr2g0131121 RchiOBHm_Chr4g0408901 RchiOBHm_Chr5g0041691 RchiOBHm_Chr7g0237021
rosa_laevigata RLG00000019168 RLG00000030456 RLG00000030460 RLG00000030571
rosa_multiflora Rmu_co7963468.1_g000001 Rmu_co7991248.1_g000001 Rmu_co8195256.1_g000001 Rmu_co8312199.1_g000001 Rmu_co8349215.1_g000001 Rmu_co8351041.1_g000001 Rmu_co8422719.1_g000001 Rmu_co8450711.1_g000001 Rmu_co8465555.1_g000001 Rmu_co8489965.1_g000001 Rmu_sc0000087.1_g000014 Rmu_sc0000272.1_g000015 Rmu_sc0000724.1_g000006 Rmu_sc0000724.1_g000021 Rmu_sc0000724.1_g000022 Rmu_sc0000861.1_g000024 Rmu_sc0001049.1_g000006 Rmu_sc0001049.1_g000007 Rmu_sc0001512.1_g000001 Rmu_sc0002022.1_g000004 Rmu_sc0002063.1_g000011 Rmu_sc0002131.1_g000024 Rmu_sc0002337.1_g000012 Rmu_sc0002341.1_g000005 Rmu_sc0002539.1_g000117 Rmu_sc0002745.1_g000005 Rmu_sc0002745.1_g000006 Rmu_sc0003145.1_g000002 Rmu_sc0003199.1_g000007 Rmu_sc0003270.1_g000039 Rmu_sc0003270.1_g000040 Rmu_sc0003423.1_g000001 Rmu_sc0003423.1_g000002 Rmu_sc0003629.1_g000067 Rmu_sc0004039.1_g000002 Rmu_sc0004555.1_g000001 Rmu_sc0004555.1_g000005 Rmu_sc0004555.1_g000006 Rmu_sc0004947.1_g000025 Rmu_sc0004947.1_g000026 Rmu_sc0005255.1_g000025 Rmu_sc0007977.1_g000016 Rmu_sc0008752.1_g000005 Rmu_sc0009236.1_g000004 Rmu_sc0009236.1_g000008 Rmu_sc0009236.1_g000009 Rmu_sc0009236.1_g000010 Rmu_sc0011424.1_g000036 Rmu_sc0013413.1_g000001 Rmu_sc0013735.1_g000002 Rmu_sc0015304.1_g000002 Rmu_sc0015304.1_g000003 Rmu_sc0015585.1_g000001 Rmu_sc0018410.1_g000001 Rmu_sc0022723.1_g000001 Rmu_sc0022723.1_g000002 Rmu_sc0022724.1_g000001 Rmu_sc0023430.1_g000001 Rmu_sc0026053.1_g000001 Rmu_sc0026429.1_g000002 Rmu_sc0026647.1_g000001 Rmu_sc0031359.1_g000001 Rmu_ssc0000042.1_g000040 Rmu_ssc0000081.1_g000001 Rmu_ssc0000300.1_g000011
rosa_roxburghii Rroxscaffold_160G00433620 Rroxscaffold_160G00433990 Rroxscaffold_1G00038820 Rroxscaffold_2G00113190 Rroxscaffold_4G00283240 Rroxscaffold_4G00283930 Rroxscaffold_4G00284010 Rroxscaffold_4G00322600 Rroxscaffold_4G00327710 Rroxscaffold_4G00328100 Rroxscaffold_4G00328130 Rroxscaffold_4G00331590 Rroxscaffold_5G00353280
rosa_rugosa Rorug01G0004200 Rorug01G0018800 Rorug01G0018900 Rorug01G0029900 Rorug01G0030000 Rorug01G0030000 Rorug01G0030000 Rorug01G0030200 Rorug01G0030300 Rorug01G0030800 Rorug01G0032400 Rorug01G0032900 Rorug01G0055800 Rorug01G0067600 Rorug01G0067700 Rorug01G0067800 Rorug01G0067900 Rorug01G0068000 Rorug01G0379500 Rorug01G0379600 Rorug01G0379600 Rorug01G0385200 Rorug01G0385300 Rorug02G0295100 Rorug04G0088500 Rorug04G0088600 Rorug05G0194900 Rorug07G0301400
rosa_samantha Rh1AG014800 Rh1AG015200 Rh1AG030500 Rh1AG041800 Rh1AG042300 Rh1AG042700 Rh1AG042800 Rh1AG042900 Rh1AG045000 Rh1AG085100 Rh1AG085200 Rh1AG388600 Rh1AG396700 Rh1AG396900 Rh1BG007300 Rh1BG039200 Rh1BG039600 Rh1BG042800 Rh1BG067300 Rh1BG109700 Rh1BG109900 Rh1BG354000 Rh1CG043800 Rh1CG044400 Rh1DG008600 Rh1DG022900 Rh1DG023400 Rh1DG023600 Rh1DG023900 Rh1DG024100 Rh1DG024400 Rh1DG024500 Rh1DG025500 Rh1DG025700 Rh1DG026500 Rh1DG026800 Rh1DG038900 Rh1DG048800 Rh1DG049300 Rh1DG051700 Rh1DG052000 Rh1DG146200 Rh1DG383500 Rh2BG354900 Rh2CG333600 Rh4BG149600 Rh4BG149700 Rh4CG160600
rosa_wichuraiana Rw0G001100 Rw0G001130 Rw0G001180 Rw0G012580 Rw1G003480 Rw1G003540 Rw1G003600 Rw1G003640 Rw1G003670 Rw1G003750 Rw1G003940 Rw1G006650 Rw1G034550 Rw1G034560 Rw1G034650 Rw1G034660 Rw1G035170 Rw1G035190 Rw1G037060 Rw2G028210 Rw4G012540 Rw5G026370 Rw7G037900

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 502
AccII CGCG 1 cut(s) 243
AciI CCGC 2 cut(s) 362, 408
AclWI GGATC 1 cut(s) 625
AcoI YGGCCR 1 cut(s) 156
AcsI RAATTY 5 cut(s) 161, 170, 367, 611, 926
AfiI CCNNNNNNNGG 3 cut(s) 11, 357, 640
AflIII ACRYGT 1 cut(s) 34
AhlI ACTAGT 1 cut(s) 868
AjnI CCWGG 1 cut(s) 4
AluBI AGCT 4 cut(s) 543, 721, 815, 1081
AluI AGCT 4 cut(s) 543, 721, 815, 1081
AlwI GGATC 1 cut(s) 625
AoxI GGCC 3 cut(s) 156, 359, 933
ApeKI GCWGC 4 cut(s) 405, 809, 812, 1081
ApoI RAATTY 5 cut(s) 161, 170, 367, 611, 926
ArsI GACNNNNNNTTYG 4 cut(s) 24, 56, 596, 628
AspS9I GGNCC 1 cut(s) 149
AsuHPI GGTGA 1 cut(s) 803
AvaII GGWCC 1 cut(s) 149
BbsI GAAGAC 1 cut(s) 434
BbvI GCAGC 4 cut(s) 417, 796, 824, 1068
BccI CCATC 5 cut(s) 148, 259, 871, 908, 944
BciT130I CCWGG 1 cut(s) 6
BclI TGATCA 1 cut(s) 304
BcuI ACTAGT 1 cut(s) 868
BfaI CTAG 2 cut(s) 729, 869
BfmI CTRYAG 2 cut(s) 810, 1112
BisI GCNGC 5 cut(s) 362, 406, 810, 813, 1082
BlsI GCNGC 5 cut(s) 363, 407, 811, 814, 1083
Bme1390I CCNGG 1 cut(s) 6
Bme18I GGWCC 1 cut(s) 149
BmgT120I GGNCC 1 cut(s) 149
BmiI GGNNCC 1 cut(s) 271
BmrFI CCNGG 1 cut(s) 6
BmrI ACTGGG 1 cut(s) 521
BmsI GCATC 3 cut(s) 40, 235, 563
BmuI ACTGGG 1 cut(s) 521
BpiI GAAGAC 1 cut(s) 434
BplI GAGNNNNNCTC 2 cut(s) 923, 955
BpmI CTGGAG 2 cut(s) 854, 925
BsaJI CCNNGG 2 cut(s) 5, 417
BsaXI ACNNNNNCTCC 2 cut(s) 611, 641
Bsc4I CCNNNNNNNGG 3 cut(s) 11, 357, 640
Bse1I ACTGG 2 cut(s) 527, 837
Bse3DI GCAATG 2 cut(s) 60, 766
BseBI CCWGG 1 cut(s) 6
BseDI CCNNGG 2 cut(s) 5, 417
BseGI GGATG 1 cut(s) 100
BseLI CCNNNNNNNGG 3 cut(s) 11, 357, 640
BseMI GCAATG 2 cut(s) 60, 766
BseMII CTCAG 1 cut(s) 1068
BseNI ACTGG 2 cut(s) 527, 837
BseXI GCAGC 4 cut(s) 417, 796, 824, 1068
Bsh1236I CGCG 1 cut(s) 243
BshFI GGCC 3 cut(s) 158, 361, 935
BslI CCNNNNNNNGG 3 cut(s) 11, 357, 640
BsmI GAATGC 1 cut(s) 519
BsnI GGCC 3 cut(s) 158, 361, 935
Bsp143I GATC 2 cut(s) 304, 630
BspACI CCGC 2 cut(s) 362, 408
BspANI GGCC 3 cut(s) 158, 361, 935
BspCNI CTCAG 1 cut(s) 1069
BspFNI CGCG 1 cut(s) 243
BspLI GGNNCC 1 cut(s) 271
BspMAI CTGCAG 1 cut(s) 814
BspPI GGATC 1 cut(s) 625
BsrDI GCAATG 2 cut(s) 60, 766
BsrI ACTGG 2 cut(s) 527, 837
BssECI CCNNGG 2 cut(s) 5, 417
BssMI GATC 2 cut(s) 304, 630
BssT1I CCWWGG 1 cut(s) 417
Bst2UI CCWGG 1 cut(s) 6
Bst4CI ACNGT 5 cut(s) 277, 804, 972, 1009, 1116
BstAPI GCANNNNNTGC 1 cut(s) 254
BstC8I GCNNGC 1 cut(s) 751
BstDEI CTNAG 1 cut(s) 1077
BstF5I GGATG 1 cut(s) 100
BstFNI CGCG 1 cut(s) 243
BstKTI GATC 2 cut(s) 307, 633
BstMBI GATC 2 cut(s) 304, 630
BstMWI GCNNNNNNNGC 3 cut(s) 254, 806, 1033
BstNI CCWGG 1 cut(s) 6
BstNSI RCATGY 2 cut(s) 38, 702
BstSCI CCNGG 1 cut(s) 4
BstSFI CTRYAG 2 cut(s) 810, 1112
BstUI CGCG 1 cut(s) 243
BstV1I GCAGC 4 cut(s) 417, 796, 824, 1068
BstV2I GAAGAC 1 cut(s) 434
BstXI CCANNNNNNTGG 1 cut(s) 78
BsuRI GGCC 3 cut(s) 158, 361, 935
BtgZI GCGATG 1 cut(s) 258
BtsCI GGATG 1 cut(s) 100
BtsI GCAGTG 1 cut(s) 709
BtsIMutI CAGTG 5 cut(s) 273, 709, 830, 907, 1055
Cac8I GCNNGC 1 cut(s) 751
Cfr13I GGNCC 1 cut(s) 149
CviAII CATG 4 cut(s) 35, 203, 699, 779
DdeI CTNAG 1 cut(s) 1077
DpnI GATC 2 cut(s) 306, 632
DpnII GATC 2 cut(s) 304, 630
EaeI YGGCCR 1 cut(s) 156
Eco130I CCWWGG 1 cut(s) 417
Eco47I GGWCC 1 cut(s) 149
EcoRI GAATTC 2 cut(s) 161, 170
EcoRII CCWGG 1 cut(s) 4
EcoT14I CCWWGG 1 cut(s) 417
EcoT22I ATGCAT 1 cut(s) 780
ErhI CCWWGG 1 cut(s) 417
FaeI CATG 4 cut(s) 38, 206, 702, 782
FalI AAGNNNNNCTT 2 cut(s) 181, 213
FatI CATG 4 cut(s) 34, 202, 698, 778
FauNDI CATATG 1 cut(s) 888
FbaI TGATCA 1 cut(s) 304
FblI GTMKAC 1 cut(s) 502
Fnu4HI GCNGC 5 cut(s) 362, 406, 810, 813, 1082
FokI GGATG 1 cut(s) 107
Fsp4HI GCNGC 5 cut(s) 362, 406, 810, 813, 1082
FspBI CTAG 2 cut(s) 729, 869
GluI GCNGC 5 cut(s) 362, 406, 810, 813, 1082
GsuI CTGGAG 2 cut(s) 854, 925
HaeIII GGCC 3 cut(s) 158, 361, 935
Hin1II CATG 4 cut(s) 38, 206, 702, 782
HinfI GANTC 5 cut(s) 134, 430, 499, 1038, 1108
HphI GGTGA 1 cut(s) 803
Hpy166II GTNNAC 2 cut(s) 455, 503
Hpy188I TCNGA 5 cut(s) 94, 153, 301, 600, 876
Hpy188III TCNNGA 6 cut(s) 107, 131, 185, 716, 942, 1121
Hpy8I GTNNAC 2 cut(s) 455, 503
HpyAV CCTTC 3 cut(s) 420, 567, 644
HpyCH4III ACNGT 5 cut(s) 277, 804, 972, 1009, 1116
HpyF10VI GCNNNNNNNGC 3 cut(s) 254, 806, 1033
HpyF3I CTNAG 1 cut(s) 1077
Hsp92II CATG 4 cut(s) 38, 206, 702, 782
Ksp22I TGATCA 1 cut(s) 304
Kzo9I GATC 2 cut(s) 304, 630
LmnI GCTCC 1 cut(s) 209
LpnPI CCDG 8 cut(s) 18, 132, 408, 519, 540, 684, 818, 955
Lsp1109I GCAGC 4 cut(s) 417, 796, 824, 1068
LweI GCATC 3 cut(s) 40, 235, 563
MaeI CTAG 2 cut(s) 729, 869
MaeIII GTNAC 3 cut(s) 115, 232, 1009
MalI GATC 2 cut(s) 306, 632
MboI GATC 2 cut(s) 304, 630
MboII GAAGA 5 cut(s) 397, 434, 476, 502, 704
MfeI CAATTG 1 cut(s) 284
MlyI GAGTC 2 cut(s) 424, 508
MmeI TCCRAC 3 cut(s) 72, 187, 293
MnlI CCTC 7 cut(s) 347, 466, 643, 667, 829, 925, 951
Mph1103I ATGCAT 1 cut(s) 780
MseI TTAA 7 cut(s) 66, 381, 482, 533, 864, 921, 948
MspA1I CMGCKG 2 cut(s) 408, 815
MspR9I CCNGG 1 cut(s) 6
MunI CAATTG 1 cut(s) 284
Mva1269I GAATGC 1 cut(s) 519
MvaI CCWGG 1 cut(s) 6
MvnI CGCG 1 cut(s) 243
MwoI GCNNNNNNNGC 3 cut(s) 254, 806, 1033
NdeI CATATG 1 cut(s) 888
NdeII GATC 2 cut(s) 304, 630
NlaIII CATG 4 cut(s) 38, 206, 702, 782
NlaIV GGNNCC 1 cut(s) 271
NmuCI GTSAC 2 cut(s) 115, 232
NsiI ATGCAT 1 cut(s) 780
NspI RCATGY 2 cut(s) 38, 702
PciI ACATGT 1 cut(s) 34
PctI GAATGC 1 cut(s) 519
PfeI GAWTC 3 cut(s) 134, 1038, 1108
PkrI GCNGC 5 cut(s) 363, 407, 811, 814, 1083
PleI GAGTC 2 cut(s) 424, 507
PpsI GAGTC 2 cut(s) 424, 507
PscI ACATGT 1 cut(s) 34
Psp6I CCWGG 1 cut(s) 4
PspGI CCWGG 1 cut(s) 4
PspN4I GGNNCC 1 cut(s) 271
PspPI GGNCC 1 cut(s) 149
PstI CTGCAG 1 cut(s) 814
PvuII CAGCTG 1 cut(s) 815
SaqAI TTAA 7 cut(s) 66, 381, 482, 533, 864, 921, 948
SatI GCNGC 5 cut(s) 362, 406, 810, 813, 1082
Sau3AI GATC 2 cut(s) 304, 630
Sau96I GGNCC 1 cut(s) 149
SchI GAGTC 2 cut(s) 424, 508
ScrFI CCNGG 1 cut(s) 6
SetI ASST 9 cut(s) 183, 545, 723, 734, 786, 817, 1023, 1083, 1128
SfaNI GCATC 3 cut(s) 40, 235, 563
SfcI CTRYAG 2 cut(s) 810, 1112
SinI GGWCC 1 cut(s) 149
SpeI ACTAGT 1 cut(s) 868
SsiI CCGC 2 cut(s) 362, 408
SspMI CTAG 2 cut(s) 729, 869
StyD4I CCNGG 1 cut(s) 4
StyI CCWWGG 1 cut(s) 417
TaaI ACNGT 5 cut(s) 277, 804, 972, 1009, 1116
TaqI TCGA 2 cut(s) 184, 560
TauI GCSGC 1 cut(s) 364
TfiI GAWTC 3 cut(s) 134, 1038, 1108
Tru1I TTAA 7 cut(s) 66, 381, 482, 533, 864, 921, 948
Tru9I TTAA 7 cut(s) 66, 381, 482, 533, 864, 921, 948
TscAI CASTG 5 cut(s) 280, 709, 837, 907, 1062
TseFI GTSAC 2 cut(s) 115, 232
TseI GCWGC 4 cut(s) 405, 809, 812, 1081
Tsp45I GTSAC 2 cut(s) 115, 232
TspDTI ATGAA 3 cut(s) 71, 191, 624
TspRI CASTG 5 cut(s) 280, 709, 837, 907, 1062
VpaK11BI GGWCC 1 cut(s) 149
XapI RAATTY 5 cut(s) 161, 170, 367, 611, 926
XceI RCATGY 2 cut(s) 38, 702
XmiI GTMKAC 1 cut(s) 502
XspI CTAG 2 cut(s) 729, 869
Zsp2I ATGCAT 1 cut(s) 780
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.