disease resistance
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Rx_N | PF18052 | 12 - 100 | 1.6e-21 | Rx N-terminal domain |
| NB-ARC | PF00931 | 176 - 349 | 9.1e-38 | NB-ARC domain |
| WHD_DRP | PF23559 | 433 - 502 | 3.6e-23 | Disease resistance protein Winged helix domain |
| LRR_14 | PF23598 | 581 - 878 | 5.7e-24 | Leucine-rich repeat region |
| LRR_R13L1-DRL21 | PF25019 | 698 - 822 | 2e-35 | R13L1/DRL21 LRRs |
| LRR_RPS2 | PF23247 | 1071 - 1194 | 3.2e-06 | Plant disease resistance protein RPS2-like, leucine-rich repeats |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 2 cut(s) | 336, 3494 |
| AarI | CACCTGC | 1 cut(s) | 1905 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 133 |
| AatII | GACGTC | 2 cut(s) | 446, 2933 |
| Acc36I | ACCTGC | 1 cut(s) | 1905 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 1701, 3197 |
| AccBSI | CCGCTC | 1 cut(s) | 149 |
| AccI | GTMKAC | 2 cut(s) | 137, 466 |
| AccII | CGCG | 4 cut(s) | 66, 460, 1410, 1946 |
| AclWI | GGATC | 3 cut(s) | 2595, 3425, 3562 |
| AcoI | YGGCCR | 2 cut(s) | 2855, 2980 |
| AcsI | RAATTY | 8 cut(s) | 88, 254, 783, 1267, 1316, 2333, 3077, 3263 |
| AcuI | CTGAAG | 3 cut(s) | 204, 2960, 3364 |
| AcyI | GRCGYC | 4 cut(s) | 99, 162, 443, 2930 |
| AfaI | GTAC | 3 cut(s) | 80, 321, 1236 |
| AfiI | CCNNNNNNNGG | 7 cut(s) | 171, 611, 612, 1701, 2423, 3197, 3655 |
| AflIII | ACRYGT | 3 cut(s) | 243, 480, 2274 |
| AhlI | ACTAGT | 1 cut(s) | 3325 |
| AjiI | CACGTC | 2 cut(s) | 293, 481 |
| AjnI | CCWGG | 3 cut(s) | 222, 1694, 2174 |
| AleI | CACNNNNGTG | 1 cut(s) | 2595 |
| Alw21I | GWGCWC | 3 cut(s) | 156, 1770, 2307 |
| Alw26I | GTCTC | 5 cut(s) | 213, 2444, 2856, 3147, 3517 |
| AlwI | GGATC | 3 cut(s) | 2595, 3425, 3562 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 43, 112 |
| Ama87I | CYCGRG | 1 cut(s) | 3520 |
| AoxI | GGCC | 7 cut(s) | 225, 1405, 1704, 2105, 2181, 2855, 2980 |
| ApaI | GGGCCC | 1 cut(s) | 2109 |
| ApeKI | GCWGC | 8 cut(s) | 43, 1127, 1330, 1514, 1798, 2962, 3046, 3426 |
| ApoI | RAATTY | 8 cut(s) | 88, 254, 783, 1267, 1316, 2333, 3077, 3263 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 1301, 1333 |
| AseI | ATTAAT | 2 cut(s) | 1053, 1965 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 2014, 2697, 3374 |
| AspLEI | GCGC | 3 cut(s) | 279, 1974, 2385 |
| AspS9I | GGNCC | 7 cut(s) | 1405, 1704, 2105, 2106, 2181, 2218, 2354 |
| AsuC2I | CCSGG | 2 cut(s) | 95, 606 |
| AsuHPI | GGTGA | 8 cut(s) | 527, 1565, 1826, 2077, 2299, 2513, 2857, 3665 |
| AsuII | TTCGAA | 1 cut(s) | 1579 |
| AvaI | CYCGRG | 1 cut(s) | 3520 |
| AvaII | GGWCC | 2 cut(s) | 2218, 2354 |
| BaeGI | GKGCMC | 1 cut(s) | 2109 |
| BanII | GRGCYC | 3 cut(s) | 1588, 2109, 2307 |
| BauI | CACGAG | 1 cut(s) | 2245 |
| BbsI | GAAGAC | 5 cut(s) | 246, 623, 2925, 3547, 3609 |
| Bbv12I | GWGCWC | 3 cut(s) | 156, 1770, 2307 |
| BbvCI | CCTCAGC | 1 cut(s) | 3467 |
| BbvI | GCAGC | 8 cut(s) | 30, 1114, 1342, 1526, 1785, 2974, 3033, 3413 |
| BccI | CCATC | 9 cut(s) | 506, 1270, 1342, 1613, 1695, 1983, 2318, 3446, 3524 |
| BceAI | ACGGC | 1 cut(s) | 2967 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 373, 407, 2009, 2043 |
| BciT130I | CCWGG | 3 cut(s) | 224, 1696, 2176 |
| BclI | TGATCA | 2 cut(s) | 295, 2080 |
| BcnI | CCSGG | 2 cut(s) | 95, 606 |
| BcoDI | GTCTC | 5 cut(s) | 213, 2444, 2856, 3147, 3517 |
| BcuI | ACTAGT | 1 cut(s) | 3325 |
| BfaI | CTAG | 7 cut(s) | 1208, 2024, 2952, 3011, 3083, 3179, 3326 |
| BfmI | CTRYAG | 3 cut(s) | 35, 591, 3421 |
| BfuAI | ACCTGC | 1 cut(s) | 1905 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 2180 |
| BlpI | GCTNAGC | 1 cut(s) | 155 |
| BmcAI | AGTACT | 1 cut(s) | 80 |
| Bme1390I | CCNGG | 5 cut(s) | 95, 224, 606, 1696, 2176 |
| Bme18I | GGWCC | 2 cut(s) | 2218, 2354 |
| BmeT110I | CYCGRG | 1 cut(s) | 3520 |
| BmgBI | CACGTC | 2 cut(s) | 293, 481 |
| BmgT120I | GGNCC | 7 cut(s) | 1405, 1704, 2105, 2106, 2181, 2218, 2354 |
| BmiI | GGNNCC | 3 cut(s) | 973, 2107, 2108 |
| BmrFI | CCNGG | 5 cut(s) | 95, 224, 606, 1696, 2176 |
| BmrI | ACTGGG | 2 cut(s) | 17, 3362 |
| BmsI | GCATC | 7 cut(s) | 556, 646, 915, 1981, 2003, 2125, 2161 |
| BmuI | ACTGGG | 2 cut(s) | 17, 3362 |
| BoxI | GACNNNNGTC | 1 cut(s) | 2162 |
| BpiI | GAAGAC | 5 cut(s) | 246, 623, 2925, 3547, 3609 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 138, 170 |
| BpmI | CTGGAG | 2 cut(s) | 134, 999 |
| Bpu10I | CCTNAGC | 3 cut(s) | 450, 2793, 3467 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 155 |
| Bpu14I | TTCGAA | 1 cut(s) | 1579 |
| BpuEI | CTTGAG | 4 cut(s) | 95, 2282, 2522, 3647 |
| BpuMI | CCSGG | 2 cut(s) | 95, 606 |
| BsaHI | GRCGYC | 4 cut(s) | 99, 162, 443, 2930 |
| BsaI | GGTCTC | 1 cut(s) | 213 |
| BsaJI | CCNNGG | 4 cut(s) | 94, 165, 1695, 2122 |
| BsaWI | WCCGGW | 1 cut(s) | 3448 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 2834, 2864 |
| Bsc4I | CCNNNNNNNGG | 7 cut(s) | 171, 611, 612, 1701, 2423, 3197, 3655 |
| Bse118I | RCCGGY | 1 cut(s) | 1066 |
| Bse1I | ACTGG | 6 cut(s) | 12, 982, 1863, 2220, 2589, 3357 |
| Bse3DI | GCAATG | 2 cut(s) | 1602, 1937 |
| BseBI | CCWGG | 3 cut(s) | 224, 1696, 2176 |
| BseDI | CCNNGG | 4 cut(s) | 94, 165, 1695, 2122 |
| BseGI | GGATG | 8 cut(s) | 214, 749, 1353, 1706, 2176, 2921, 3457, 3516 |
| BseLI | CCNNNNNNNGG | 7 cut(s) | 171, 611, 612, 1701, 2423, 3197, 3655 |
| BseMI | GCAATG | 2 cut(s) | 1602, 1937 |
| BseNI | ACTGG | 6 cut(s) | 12, 982, 1863, 2220, 2589, 3357 |
| BseRI | GAGGAG | 3 cut(s) | 2997, 3053, 3350 |
| BseSI | GKGCMC | 1 cut(s) | 2109 |
| BseXI | GCAGC | 8 cut(s) | 30, 1114, 1342, 1526, 1785, 2974, 3033, 3413 |
| BsgI | GTGCAG | 1 cut(s) | 788 |
| Bsh1236I | CGCG | 4 cut(s) | 66, 460, 1410, 1946 |
| BshFI | GGCC | 7 cut(s) | 227, 1407, 1706, 2107, 2183, 2857, 2982 |
| BsiHKAI | GWGCWC | 3 cut(s) | 156, 1770, 2307 |
| BsiHKCI | CYCGRG | 1 cut(s) | 3520 |
| BsiSI | CCGG | 4 cut(s) | 94, 606, 1067, 3449 |
| BslFI | GGGAC | 4 cut(s) | 303, 454, 2140, 2895 |
| BslI | CCNNNNNNNGG | 7 cut(s) | 171, 611, 612, 1701, 2423, 3197, 3655 |
| BsmAI | GTCTC | 5 cut(s) | 213, 2444, 2856, 3147, 3517 |
| BsmBI | CGTCTC | 2 cut(s) | 2444, 3147 |
| BsmFI | GGGAC | 4 cut(s) | 303, 454, 2140, 2895 |
| BsmI | GAATGC | 3 cut(s) | 1224, 2016, 2473 |
| BsnI | GGCC | 7 cut(s) | 227, 1407, 1706, 2107, 2183, 2857, 2982 |
| Bso31I | GGTCTC | 1 cut(s) | 213 |
| BsoBI | CYCGRG | 1 cut(s) | 3520 |
| Bsp119I | TTCGAA | 1 cut(s) | 1579 |
| Bsp120I | GGGCCC | 1 cut(s) | 2105 |
| Bsp1286I | GDGCHC | 5 cut(s) | 156, 1588, 1770, 2109, 2307 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 155 |
| Bsp68I | TCGCGA | 2 cut(s) | 66, 460 |
| BspANI | GGCC | 7 cut(s) | 227, 1407, 1706, 2107, 2183, 2857, 2982 |
| BspFNI | CGCG | 4 cut(s) | 66, 460, 1410, 1946 |
| BspLI | GGNNCC | 3 cut(s) | 973, 2107, 2108 |
| BspMAI | CTGCAG | 1 cut(s) | 39 |
| BspMI | ACCTGC | 1 cut(s) | 1905 |
| BspPI | GGATC | 3 cut(s) | 2595, 3425, 3562 |
| BspT104I | TTCGAA | 1 cut(s) | 1579 |
| BspTNI | GGTCTC | 1 cut(s) | 213 |
| BsrBI | CCGCTC | 1 cut(s) | 149 |
| BsrDI | GCAATG | 2 cut(s) | 1602, 1937 |
| BsrFI | RCCGGY | 1 cut(s) | 1066 |
| BsrI | ACTGG | 6 cut(s) | 12, 982, 1863, 2220, 2589, 3357 |
| BssAI | RCCGGY | 1 cut(s) | 1066 |
| BssECI | CCNNGG | 4 cut(s) | 94, 165, 1695, 2122 |
| BssNI | GRCGYC | 4 cut(s) | 99, 162, 443, 2930 |
| BssSI | CACGAG | 1 cut(s) | 2245 |
| Bst2BI | CACGAG | 1 cut(s) | 2245 |
| Bst2UI | CCWGG | 3 cut(s) | 224, 1696, 2176 |
| Bst4CI | ACNGT | 6 cut(s) | 201, 1749, 1833, 2719, 2765, 3650 |
| Bst6I | CTCTTC | 2 cut(s) | 502, 3150 |
| BstACI | GRCGYC | 4 cut(s) | 99, 162, 443, 2930 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 43 |
| BstBI | TTCGAA | 1 cut(s) | 1579 |
| BstC8I | GCNNGC | 7 cut(s) | 304, 561, 602, 1588, 1661, 1944, 3071 |
| BstF5I | GGATG | 8 cut(s) | 214, 749, 1353, 1706, 2176, 2921, 3457, 3516 |
| BstFNI | CGCG | 4 cut(s) | 66, 460, 1410, 1946 |
| BstHHI | GCGC | 3 cut(s) | 279, 1974, 2385 |
| BstMAI | GTCTC | 5 cut(s) | 213, 2444, 2856, 3147, 3517 |
| BstNI | CCWGG | 3 cut(s) | 224, 1696, 2176 |
| BstNSI | RCATGY | 6 cut(s) | 247, 563, 604, 1040, 2278, 3610 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 2162 |
| BstSCI | CCNGG | 5 cut(s) | 93, 222, 604, 1694, 2174 |
| BstSFI | CTRYAG | 3 cut(s) | 35, 591, 3421 |
| BstSLI | GKGCMC | 1 cut(s) | 2109 |
| BstUI | CGCG | 4 cut(s) | 66, 460, 1410, 1946 |
| BstV1I | GCAGC | 8 cut(s) | 30, 1114, 1342, 1526, 1785, 2974, 3033, 3413 |
| BstV2I | GAAGAC | 5 cut(s) | 246, 623, 2925, 3547, 3609 |
| BstX2I | RGATCY | 1 cut(s) | 3417 |
| BstYI | RGATCY | 1 cut(s) | 3417 |
| BsuRI | GGCC | 7 cut(s) | 227, 1407, 1706, 2107, 2183, 2857, 2982 |
| BtrI | CACGTC | 2 cut(s) | 293, 481 |
| BtsCI | GGATG | 8 cut(s) | 214, 749, 1353, 1706, 2176, 2921, 3457, 3516 |
| BtsI | GCAGTG | 2 cut(s) | 2048, 3397 |
| BtsIMutI | CAGTG | 6 cut(s) | 5, 975, 2048, 2213, 2936, 3397 |
| BtuMI | TCGCGA | 2 cut(s) | 66, 460 |
| BveI | ACCTGC | 1 cut(s) | 1905 |
| Cac8I | GCNNGC | 7 cut(s) | 304, 561, 602, 1588, 1661, 1944, 3071 |
| CaiI | CAGNNNCTG | 2 cut(s) | 43, 112 |
| CfoI | GCGC | 3 cut(s) | 279, 1974, 2385 |
| Cfr10I | RCCGGY | 1 cut(s) | 1066 |
| Cfr13I | GGNCC | 7 cut(s) | 1405, 1704, 2105, 2106, 2181, 2218, 2354 |
| CseI | GACGC | 2 cut(s) | 88, 170 |
| Csp6I | GTAC | 3 cut(s) | 79, 320, 1235 |
| CviQI | GTAC | 3 cut(s) | 79, 320, 1235 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 133 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 133 |
| EaeI | YGGCCR | 2 cut(s) | 2855, 2980 |
| Eam1104I | CTCTTC | 2 cut(s) | 502, 3150 |
| EarI | CTCTTC | 2 cut(s) | 502, 3150 |
| Ecl136II | GAGCTC | 1 cut(s) | 2305 |
| Eco24I | GRGCYC | 3 cut(s) | 1588, 2109, 2307 |
| Eco31I | GGTCTC | 1 cut(s) | 213 |
| Eco32I | GATATC | 2 cut(s) | 235, 844 |
| Eco47I | GGWCC | 2 cut(s) | 2218, 2354 |
| Eco53kI | GAGCTC | 1 cut(s) | 2305 |
| Eco57I | CTGAAG | 3 cut(s) | 204, 2960, 3364 |
| Eco88I | CYCGRG | 1 cut(s) | 3520 |
| EcoICRI | GAGCTC | 1 cut(s) | 2305 |
| EcoO109I | RGGNCCY | 2 cut(s) | 2105, 2106 |
| EcoRII | CCWGG | 3 cut(s) | 222, 1694, 2174 |
| EcoRV | GATATC | 2 cut(s) | 235, 844 |
| EcoT22I | ATGCAT | 2 cut(s) | 1485, 1996 |
| EcoT38I | GRGCYC | 3 cut(s) | 1588, 2109, 2307 |
| Esp3I | CGTCTC | 2 cut(s) | 2444, 3147 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 410, 442 |
| FaqI | GGGAC | 4 cut(s) | 303, 454, 2140, 2895 |
| FauI | CCCGC | 1 cut(s) | 1951 |
| FbaI | TGATCA | 2 cut(s) | 295, 2080 |
| FblI | GTMKAC | 2 cut(s) | 137, 466 |
| FokI | GGATG | 8 cut(s) | 221, 736, 1360, 1713, 2183, 2928, 3464, 3503 |
| FriOI | GRGCYC | 3 cut(s) | 1588, 2109, 2307 |
| FspBI | CTAG | 7 cut(s) | 1208, 2024, 2952, 3011, 3083, 3179, 3326 |
| GlaI | GCGC | 3 cut(s) | 278, 1973, 2384 |
| GsuI | CTGGAG | 2 cut(s) | 134, 999 |
| HaeIII | GGCC | 7 cut(s) | 227, 1407, 1706, 2107, 2183, 2857, 2982 |
| HapII | CCGG | 4 cut(s) | 94, 606, 1067, 3449 |
| HgaI | GACGC | 2 cut(s) | 88, 170 |
| HhaI | GCGC | 3 cut(s) | 279, 1974, 2385 |
| Hin1I | GRCGYC | 4 cut(s) | 99, 162, 443, 2930 |
| Hin6I | GCGC | 3 cut(s) | 277, 1972, 2383 |
| HinP1I | GCGC | 3 cut(s) | 277, 1972, 2383 |
| HincII | GTYRAC | 4 cut(s) | 57, 2750, 2928, 2970 |
| HindII | GTYRAC | 4 cut(s) | 57, 2750, 2928, 2970 |
| HindIII | AAGCTT | 3 cut(s) | 494, 2669, 3071 |
| HpaII | CCGG | 4 cut(s) | 94, 606, 1067, 3449 |
| HphI | GGTGA | 8 cut(s) | 527, 1565, 1826, 2077, 2299, 2513, 2857, 3665 |
| Hpy166II | GTNNAC | 7 cut(s) | 57, 138, 467, 2750, 2928, 2970, 3347 |
| Hpy8I | GTNNAC | 7 cut(s) | 57, 138, 467, 2750, 2928, 2970, 3347 |
| Hpy99I | CGWCG | 3 cut(s) | 104, 133, 164 |
| HpyCH4III | ACNGT | 6 cut(s) | 201, 1749, 1833, 2719, 2765, 3650 |
| HpyCH4IV | ACGT | 6 cut(s) | 131, 292, 443, 480, 1153, 2930 |
| HpySE526I | ACGT | 6 cut(s) | 131, 292, 443, 480, 1153, 2930 |
| Hsp92I | GRCGYC | 4 cut(s) | 99, 162, 443, 2930 |
| HspAI | GCGC | 3 cut(s) | 277, 1972, 2383 |
| Ksp22I | TGATCA | 2 cut(s) | 295, 2080 |
| LmnI | GCTCC | 4 cut(s) | 146, 911, 971, 2302 |
| Lsp1109I | GCAGC | 8 cut(s) | 30, 1114, 1342, 1526, 1785, 2974, 3033, 3413 |
| LweI | GCATC | 7 cut(s) | 556, 646, 915, 1981, 2003, 2125, 2161 |
| MaeI | CTAG | 7 cut(s) | 1208, 2024, 2952, 3011, 3083, 3179, 3326 |
| MaeII | ACGT | 6 cut(s) | 131, 292, 443, 480, 1153, 2930 |
| MaeIII | GTNAC | 8 cut(s) | 515, 721, 934, 1726, 1827, 2155, 2277, 2396 |
| MbiI | CCGCTC | 1 cut(s) | 149 |
| MfeI | CAATTG | 3 cut(s) | 2401, 2429, 3050 |
| MflI | RGATCY | 1 cut(s) | 3417 |
| MhlI | GDGCHC | 5 cut(s) | 156, 1588, 1770, 2109, 2307 |
| MlyI | GAGTC | 6 cut(s) | 618, 854, 1129, 1814, 2825, 3664 |
| MmeI | TCCRAC | 9 cut(s) | 82, 228, 484, 1518, 2329, 2605, 2628, 2757, 3573 |
| Mph1103I | ATGCAT | 2 cut(s) | 1485, 1996 |
| MroXI | GAANNNNTTC | 3 cut(s) | 2014, 2697, 3374 |
| MslI | CAYNNNNRTG | 3 cut(s) | 564, 651, 2595 |
| MspA1I | CMGCKG | 4 cut(s) | 2264, 2524, 2965, 3136 |
| MspI | CCGG | 4 cut(s) | 94, 606, 1067, 3449 |
| MspR9I | CCNGG | 5 cut(s) | 95, 224, 606, 1696, 2176 |
| MunI | CAATTG | 3 cut(s) | 2401, 2429, 3050 |
| Mva1269I | GAATGC | 3 cut(s) | 1224, 2016, 2473 |
| MvaI | CCWGG | 3 cut(s) | 224, 1696, 2176 |
| MvnI | CGCG | 4 cut(s) | 66, 460, 1410, 1946 |
| NciI | CCSGG | 2 cut(s) | 95, 606 |
| NlaIV | GGNNCC | 3 cut(s) | 973, 2107, 2108 |
| NmeAIII | GCCGAG | 2 cut(s) | 190, 2833 |
| NmuCI | GTSAC | 4 cut(s) | 515, 721, 934, 2155 |
| NruI | TCGCGA | 2 cut(s) | 66, 460 |
| NsiI | ATGCAT | 2 cut(s) | 1485, 1996 |
| NspI | RCATGY | 6 cut(s) | 247, 563, 604, 1040, 2278, 3610 |
| NspV | TTCGAA | 1 cut(s) | 1579 |
| OliI | CACNNNNGTG | 1 cut(s) | 2595 |
| PacI | TTAATTAA | 1 cut(s) | 1086 |
| PaeI | GCATGC | 2 cut(s) | 563, 604 |
| PaqCI | CACCTGC | 1 cut(s) | 1905 |
| PciI | ACATGT | 2 cut(s) | 243, 2274 |
| PctI | GAATGC | 3 cut(s) | 1224, 2016, 2473 |
| PdmI | GAANNNNTTC | 3 cut(s) | 2014, 2697, 3374 |
| PflFI | GACNNNGTC | 1 cut(s) | 133 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 1701, 3197 |
| PleI | GAGTC | 6 cut(s) | 617, 854, 1129, 1813, 2824, 3664 |
| PpsI | GAGTC | 6 cut(s) | 617, 854, 1129, 1813, 2824, 3664 |
| PscI | ACATGT | 2 cut(s) | 243, 2274 |
| PshAI | GACNNNNGTC | 1 cut(s) | 2162 |
| PshBI | ATTAAT | 2 cut(s) | 1053, 1965 |
| PsiI | TTATAA | 2 cut(s) | 336, 3494 |
| Psp124BI | GAGCTC | 1 cut(s) | 2307 |
| Psp6I | CCWGG | 3 cut(s) | 222, 1694, 2174 |
| PspGI | CCWGG | 3 cut(s) | 222, 1694, 2174 |
| PspN4I | GGNNCC | 3 cut(s) | 973, 2107, 2108 |
| PspOMI | GGGCCC | 1 cut(s) | 2105 |
| PspPI | GGNCC | 7 cut(s) | 1405, 1704, 2105, 2106, 2181, 2218, 2354 |
| PstI | CTGCAG | 1 cut(s) | 39 |
| PstNI | CAGNNNCTG | 2 cut(s) | 43, 112 |
| PsuI | RGATCY | 1 cut(s) | 3417 |
| PsyI | GACNNNGTC | 1 cut(s) | 133 |
| PvuII | CAGCTG | 1 cut(s) | 3136 |
| RruI | TCGCGA | 2 cut(s) | 66, 460 |
| RsaI | GTAC | 3 cut(s) | 80, 321, 1236 |
| RsaNI | GTAC | 3 cut(s) | 79, 320, 1235 |
| RseI | CAYNNNNRTG | 3 cut(s) | 564, 651, 2595 |
| SacI | GAGCTC | 1 cut(s) | 2307 |
| Sau96I | GGNCC | 7 cut(s) | 1405, 1704, 2105, 2106, 2181, 2218, 2354 |
| ScaI | AGTACT | 1 cut(s) | 80 |
| SchI | GAGTC | 6 cut(s) | 618, 854, 1129, 1814, 2825, 3664 |
| ScrFI | CCNGG | 5 cut(s) | 95, 224, 606, 1696, 2176 |
| SduI | GDGCHC | 5 cut(s) | 156, 1588, 1770, 2109, 2307 |
| SfaNI | GCATC | 7 cut(s) | 556, 646, 915, 1981, 2003, 2125, 2161 |
| SfcI | CTRYAG | 3 cut(s) | 35, 591, 3421 |
| SfuI | TTCGAA | 1 cut(s) | 1579 |
| SinI | GGWCC | 2 cut(s) | 2218, 2354 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 564, 651, 2595 |
| SmlI | CTYRAG | 4 cut(s) | 74, 2297, 2537, 3626 |
| SmoI | CTYRAG | 4 cut(s) | 74, 2297, 2537, 3626 |
| SpeI | ACTAGT | 1 cut(s) | 3325 |
| SphI | GCATGC | 2 cut(s) | 563, 604 |
| SspI | AATATT | 4 cut(s) | 1026, 1185, 1712, 3060 |
| SspMI | CTAG | 7 cut(s) | 1208, 2024, 2952, 3011, 3083, 3179, 3326 |
| SstI | GAGCTC | 1 cut(s) | 2307 |
| StyD4I | CCNGG | 5 cut(s) | 93, 222, 604, 1694, 2174 |
| TaaI | ACNGT | 6 cut(s) | 201, 1749, 1833, 2719, 2765, 3650 |
| TaiI | ACGT | 6 cut(s) | 134, 295, 446, 483, 1156, 2933 |
| TatI | WGTACW | 1 cut(s) | 78 |
| TauI | GCSGC | 4 cut(s) | 29, 572, 1410, 2557 |
| TscAI | CASTG | 6 cut(s) | 12, 982, 2055, 2220, 2943, 3404 |
| TseFI | GTSAC | 4 cut(s) | 515, 721, 934, 2155 |
| TseI | GCWGC | 8 cut(s) | 43, 1127, 1330, 1514, 1798, 2962, 3046, 3426 |
| Tsp45I | GTSAC | 4 cut(s) | 515, 721, 934, 2155 |
| TspGWI | ACGGA | 4 cut(s) | 250, 337, 424, 2607 |
| TspRI | CASTG | 6 cut(s) | 12, 982, 2055, 2220, 2943, 3404 |
| Tth111I | GACNNNGTC | 1 cut(s) | 133 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 1701, 3197 |
| VpaK11BI | GGWCC | 2 cut(s) | 2218, 2354 |
| VspI | ATTAAT | 2 cut(s) | 1053, 1965 |
| XapI | RAATTY | 8 cut(s) | 88, 254, 783, 1267, 1316, 2333, 3077, 3263 |
| XbaI | TCTAGA | 1 cut(s) | 3082 |
| XceI | RCATGY | 6 cut(s) | 247, 563, 604, 1040, 2278, 3610 |
| XmiI | GTMKAC | 2 cut(s) | 137, 466 |
| XmnI | GAANNNNTTC | 3 cut(s) | 2014, 2697, 3374 |
| XspI | CTAG | 7 cut(s) | 1208, 2024, 2952, 3011, 3083, 3179, 3326 |
| ZraI | GACGTC | 2 cut(s) | 444, 2931 |
| ZrmI | AGTACT | 1 cut(s) | 80 |
| Zsp2I | ATGCAT | 2 cut(s) | 1485, 1996 |