MD11G1045600.v1.1

disease resistance

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr11
Physical Location & Seq
Reverse (-)
3968439 .. 3971364
2926 bp
Loading structure...
UTR
Exon/CDS
Intron
MD11G1045600.v1.1.491

Sequence Viewer

Length: 2886 bp
ATGTCACTGGGAGAGGTCTTTATCACTGGTTTACTTCAAGTGTTACTTGAAAGGTTAGCATCTCGTGAGACACTAAGCTATTTTAGACGCCTACTTGGCGTTGGCAAAGAGTTGGAGAAATGGAATTCAATGTTGTCTACTATTCGAGCGGTGCTGAATGACGCGGAAGACAAGCAATTGACGAGCCAAGCAGTAAAATTGTGGTTGGATGGTCTCAGAAACTTGGCTTATGATGTGGAAGACATATTGGACAAGTTTTCAACCGAGATGTTGCGACGCCAAATAAAGGAGAAATATGGGGCTACCACAAGCAAGGTATGGGGATTGTTTTCTGATGTTAAATTTAACTGTAACTTGAGCTCAGAAATAAAGAAGATTACTGATCGGTTACATGAGATATTGGAACGGAAAAACCAACTTGGTTTAAATGAGGGGACGCCATCTGCTAAGGCATGGCACTTGCCACCAAGTTCCCGTTTACCAGAAGGACCTGTGATTGGAAGGGATACAGACAAGACGAAGATTATTGACTTGTTGTTGAAAGAAACACCCCGTGCTGTTGACTTTCATGTAGTTGCCATTGTCGGTATGCCTGGAGTGGGAAAGACAACACTTGCAAGACATGTTTTTGATGATGACAAAACGAAAGAGTTTAACCTAAAAGTATGGGTATCTGTGTCGGATGACTTCAATCTTGAAAGAGTGACAAAGGCAATTCTTGAATCCGCCACATCTGGTCTTGCAAAGGAGTTCAAGGAATTCAACCAAGTTCAAGAAAGTTTGAGTAAGGAGCTAGCAGGAAAAAAGTTTCTGATTGTTTTAGACGATGTTTGGAATACATGTGCCTATGATTTGTGGATAAAATTGCAGTCCCCCTTTCGTGTTGGAGCATTAGGAAGTAAGATAGTTGTGACAACACGTGATACGAATGTTGCAAACATGATGGGATCCACTATTTATCAATTGGGTGGCATATCAGATGATCAATGTTGGGAAGTCTTTGTGCAGCATTCCCGCTTGGACATTACCAAAAGGCCGCAAAAGTTTGAGTTGATAAAGGAGAAAATTGTTGCAAAATGCCGCGGATTGCCATTGGCTGCAAGGACTCTTGGAGGTCTTCTACGTTGTAAACAAGTGGAAGAATGGGAGGCAATCTTAAACAACAAGATGTGGAGTCTATCAGACGATACTGGCATTCTCCCGGTATTAAAATTGAGCTATCACTATCTCCCTTCGAGTTTGAAACGGTGCTTCGCCTATTGTTCCCTACTTCCGAATGACTATGAGTTCGGGGAGAAGCAGTTGATCCTTCTGTGGATGGCAGAAGGTTTGATTCAACAAAGAGTGGAGGACAAGAAACAACTGGAAGAAGTAGGCAGTGACTATTTTCAAGAGCTATTGTCCAGGTCATTATTTCAAAAGGCAAGCAAAAGCAATGATAAGTATGTAATGCATGACCTCGTTGGTGAGTTGGCGCGGTGGGCTGCAGCTGAAATATGCTTTTCATTGGAGGATAAGGGAAATGATGACTTGCATCCAATGGCTCGTCATATGTCTTATGTTATTGGTGAGCATGATGGGGTTAAAAAATTTGAGGCCATTTCAAGTGTTAAACATTTGAGGACATTCCTGCCGCTTCCACAATCAAGGTATAACTATCTAACTCGTAGGGTTACGTTTGATCTATTGCCAGAACTGCAAATCTTACGAGTGCTTTCTTTGAATGGCTATGTAATAACTGAGCTGCCCAATTCAATTGGTAAATTGTGGAATCTACGGTATCTGGACCTTTCTTATACACAGATAAAGAGTTTGCCTCCATCAACAACCACTCTTTGCAATCTGCAAACATTGTTATTAGAAGGTTGTACAAAATTGGAGGCATTGCCCGCAAACATGAGTAATCTAATTAATTTGCGGCATCTCAACAATTCCAAAGGAATGAATCCGTTTCAACATCGATTGGACGTAATGCCTCCGCATATAGGTCGATTGACGAATCTGCAATCCTTGTCGTATTTTGTGGTAGGCAAAGGTAGTGATCAGTCTGGGATAAGAGAGATAGGGTCCCTACTGCATCTTCGAGGGACATTGTGCCTCTCAAGATTGGAGAATGTGGTTGATGCTAAGGATGCTAGTGAGGCCAAGTTAATAGACAAGGAGAGGCTTGATTCATTGCAGCTGAAATGGTCTAATTTGAGCGGATCGAGGGAAATGGAGTTGGGTGTGCTTGACATGTTAAAACCTCCTAAAAATCTCAAAGAGATCACCATTAAGGGTTATGCTGGATTGAAATTTTCATCGTGGTTTGGAGATCCTCTGTTCTCTAACATGGTCCGTGTAAGCTTATACAATTGTGCAAGTTGCCATCTCTTGCCACCAGTCGGACAGTTGCCTTGCCTTAAAGAACTTCATATCGAGGGAATGACTGCCGTGGAAATCGTTGGTCCTGAATTCTACGGAGAGGGTAGCTTGCCTTTTCGAGTATTAGAGATTCTTGAGTTTTCGTTTATGTATCAATGGGAGAAATGGCTGCCCTTCGATCAGGATAAGGGAAGTGGTGTTTTCCCTAGCCTAAAAGTGCTTTCAATCAGAGAGTGCCCTAAACTGGAGGGCGAGTTGCCGAAGAAACTTAATTCGTTAGCAAAGCTTAAGATTTATAGGTGCGAGGAATTGGTGGTGGAAATTGCCAATTATGAACACGCGAGTGAAGTAAGCATCCATGGCTGCAAAGCGCTAGTGCATACCAGCGCAGAGGTTGACTTTAAGTTATTAGAGAGCATGCGGCTTTCAAATATTTTGGAGCCGCGGTTGGGAGCAAGGGGACTTACGAAAGGATTGGGCAAGATTAAGGAGTTGAAGATTAGTGATGTTTCCCACACCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

962

Amino Acids

108.78

Weight (kDa)

8.11

Isoelectric Point (pI)

39.46

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Rx_N PF18052 9 - 97 4.1e-23 Rx N-terminal domain
NB-ARC PF00931 169 - 336 6.5e-33 NB-ARC domain
WHD_DRP PF23559 424 - 492 8e-22 Disease resistance protein Winged helix domain
LRR_14 PF23598 563 - 865 2.5e-24 Leucine-rich repeat region
LRR_R13L1-DRL21 PF25019 685 - 809 1.1e-35 R13L1/DRL21 LRRs
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000070)

Species Orthologous Gene IDs
fragaria_vesca FvH4_7g00360 FvH4_7g00850 FvH4_7g02400 FvH4_7g02430 FvH4_7g02450 FvH4_7g25671 FvH4_7g25680 FvH4_7g25683 FvH4_7g26980 FvH4_7g27330 FvH4_7g27355 FvH4_7g27610 FvH4_7g27642 FvH4_7g27890 FvH4_7g27891 FvH4_7g27891 FvH4_7g27891 FvH4_7g28110 FvH4_7g28390
malus_domestica MD00G1070800.v1.1 MD00G1168000.v1.1 MD00G1168300.v1.1 MD00G1168700.v1.1 MD02G1293100.v1.1 MD02G1293200.v1.1 MD02G1314300.v1.1 MD03G1009000.v1.1 MD03G1009400.v1.1 MD03G1042300.v1.1 MD03G1042400.v1.1 MD07G1033600.v1.1 MD07G1033700.v1.1 MD07G1033900.v1.1 MD11G1011400.v1.1 MD11G1011700.v1.1 MD11G1029800.v1.1 MD11G1029900.v1.1 MD11G1030300.v1.1 MD11G1030400.v1.1 MD11G1030500.v1.1 MD11G1031300.v1.1 MD11G1031600.v1.1 MD11G1032000.v1.1 MD11G1033200.v1.1 MD11G1033600.v1.1 MD11G1033800.v1.1 MD11G1033900.v1.1 MD11G1034100.v1.1 MD11G1034400.v1.1 MD11G1040600.v1.1 MD11G1041100.v1.1 MD11G1043100.v1.1 MD11G1043500.v1.1 MD11G1044500.v1.1 MD11G1045100.v1.1 MD11G1045600.v1.1
prunus_persica Prupe.2G022400_v2.0.a1 Prupe.2G022400_v2.0.a1 Prupe.2G022400_v2.0.a1 Prupe.2G022500_v2.0.a1 Prupe.2G022500_v2.0.a1 Prupe.2G022900_v2.0.a1 Prupe.2G023500_v2.0.a1 Prupe.2G023500_v2.0.a1 Prupe.2G023500_v2.0.a1 Prupe.2G023500_v2.0.a1 Prupe.2G023500_v2.0.a1 Prupe.2G023500_v2.0.a1 Prupe.2G023600_v2.0.a1 Prupe.2G028000_v2.0.a1 Prupe.2G030200_v2.0.a1 Prupe.2G067600_v2.0.a1 Prupe.8G117900_v2.0.a1
pyrus_communis pycom02g26350 pycom03g03270 pycom07g02370 pycom11g00750 pycom11g00790 pycom11g02340 pycom11g02370 pycom11g02380 pycom11g02390 pycom11g02410 pycom11g02460 pycom11g02470 pycom11g02500 pycom11g02510 pycom11g02520 pycom11g02530 pycom11g02580 pycom11g02590 pycom11g02680 pycom11g02710 pycom11g02720 pycom11g02730 pycom11g02750 pycom11g02760 pycom11g02770 pycom11g03690 pycom13g25120 pycom13g25130 pycom13g25140 pycom13g25170 pycom13g25180 pycom13g25190 pycom13g25210
rosa_chinensis RchiOBHm_Chr1g0315001 RchiOBHm_Chr1g0315411 RchiOBHm_Chr1g0317951 RchiOBHm_Chr1g0319741 RchiOBHm_Chr1g0319841 RchiOBHm_Chr1g0319911 RchiOBHm_Chr1g0319991 RchiOBHm_Chr1g0320001 RchiOBHm_Chr1g0320021 RchiOBHm_Chr1g0320081 RchiOBHm_Chr1g0320111 RchiOBHm_Chr1g0320131 RchiOBHm_Chr1g0320161 RchiOBHm_Chr1g0320171 RchiOBHm_Chr1g0320241 RchiOBHm_Chr1g0320281 RchiOBHm_Chr1g0320411 RchiOBHm_Chr1g0320461 RchiOBHm_Chr1g0320551 RchiOBHm_Chr1g0320581 RchiOBHm_Chr1g0320661 RchiOBHm_Chr1g0320891 RchiOBHm_Chr1g0320971 RchiOBHm_Chr1g0321021 RchiOBHm_Chr1g0321031 RchiOBHm_Chr1g0321091 RchiOBHm_Chr1g0321351 RchiOBHm_Chr1g0321481 RchiOBHm_Chr1g0321491 RchiOBHm_Chr1g0327521 RchiOBHm_Chr1g0328061 RchiOBHm_Chr1g0334991 RchiOBHm_Chr1g0373781 RchiOBHm_Chr1g0373891 RchiOBHm_Chr1g0374841 RchiOBHm_Chr2g0131111 RchiOBHm_Chr2g0131121 RchiOBHm_Chr4g0408901 RchiOBHm_Chr5g0041691 RchiOBHm_Chr7g0237021
rosa_laevigata RLG00000019168 RLG00000030456 RLG00000030460 RLG00000030571
rosa_multiflora Rmu_co7963468.1_g000001 Rmu_co7991248.1_g000001 Rmu_co8195256.1_g000001 Rmu_co8312199.1_g000001 Rmu_co8349215.1_g000001 Rmu_co8351041.1_g000001 Rmu_co8422719.1_g000001 Rmu_co8450711.1_g000001 Rmu_co8465555.1_g000001 Rmu_co8489965.1_g000001 Rmu_sc0000087.1_g000014 Rmu_sc0000272.1_g000015 Rmu_sc0000724.1_g000006 Rmu_sc0000724.1_g000021 Rmu_sc0000724.1_g000022 Rmu_sc0000861.1_g000024 Rmu_sc0001049.1_g000006 Rmu_sc0001049.1_g000007 Rmu_sc0001512.1_g000001 Rmu_sc0002022.1_g000004 Rmu_sc0002063.1_g000011 Rmu_sc0002131.1_g000024 Rmu_sc0002337.1_g000012 Rmu_sc0002341.1_g000005 Rmu_sc0002539.1_g000117 Rmu_sc0002745.1_g000005 Rmu_sc0002745.1_g000006 Rmu_sc0003145.1_g000002 Rmu_sc0003199.1_g000007 Rmu_sc0003270.1_g000039 Rmu_sc0003270.1_g000040 Rmu_sc0003423.1_g000001 Rmu_sc0003423.1_g000002 Rmu_sc0003629.1_g000067 Rmu_sc0004039.1_g000002 Rmu_sc0004555.1_g000001 Rmu_sc0004555.1_g000005 Rmu_sc0004555.1_g000006 Rmu_sc0004947.1_g000025 Rmu_sc0004947.1_g000026 Rmu_sc0005255.1_g000025 Rmu_sc0007977.1_g000016 Rmu_sc0008752.1_g000005 Rmu_sc0009236.1_g000004 Rmu_sc0009236.1_g000008 Rmu_sc0009236.1_g000009 Rmu_sc0009236.1_g000010 Rmu_sc0011424.1_g000036 Rmu_sc0013413.1_g000001 Rmu_sc0013735.1_g000002 Rmu_sc0015304.1_g000002 Rmu_sc0015304.1_g000003 Rmu_sc0015585.1_g000001 Rmu_sc0018410.1_g000001 Rmu_sc0022723.1_g000001 Rmu_sc0022723.1_g000002 Rmu_sc0022724.1_g000001 Rmu_sc0023430.1_g000001 Rmu_sc0026053.1_g000001 Rmu_sc0026429.1_g000002 Rmu_sc0026647.1_g000001 Rmu_sc0031359.1_g000001 Rmu_ssc0000042.1_g000040 Rmu_ssc0000081.1_g000001 Rmu_ssc0000300.1_g000011
rosa_roxburghii Rroxscaffold_160G00433620 Rroxscaffold_160G00433990 Rroxscaffold_1G00038820 Rroxscaffold_2G00113190 Rroxscaffold_4G00283240 Rroxscaffold_4G00283930 Rroxscaffold_4G00284010 Rroxscaffold_4G00322600 Rroxscaffold_4G00327710 Rroxscaffold_4G00328100 Rroxscaffold_4G00328130 Rroxscaffold_4G00331590 Rroxscaffold_5G00353280
rosa_rugosa Rorug01G0004200 Rorug01G0018800 Rorug01G0018900 Rorug01G0029900 Rorug01G0030000 Rorug01G0030000 Rorug01G0030000 Rorug01G0030200 Rorug01G0030300 Rorug01G0030800 Rorug01G0032400 Rorug01G0032900 Rorug01G0055800 Rorug01G0067600 Rorug01G0067700 Rorug01G0067800 Rorug01G0067900 Rorug01G0068000 Rorug01G0379500 Rorug01G0379600 Rorug01G0379600 Rorug01G0385200 Rorug01G0385300 Rorug02G0295100 Rorug04G0088500 Rorug04G0088600 Rorug05G0194900 Rorug07G0301400
rosa_samantha Rh1AG014800 Rh1AG015200 Rh1AG030500 Rh1AG041800 Rh1AG042300 Rh1AG042700 Rh1AG042800 Rh1AG042900 Rh1AG045000 Rh1AG085100 Rh1AG085200 Rh1AG388600 Rh1AG396700 Rh1AG396900 Rh1BG007300 Rh1BG039200 Rh1BG039600 Rh1BG042800 Rh1BG067300 Rh1BG109700 Rh1BG109900 Rh1BG354000 Rh1CG043800 Rh1CG044400 Rh1DG008600 Rh1DG022900 Rh1DG023400 Rh1DG023600 Rh1DG023900 Rh1DG024100 Rh1DG024400 Rh1DG024500 Rh1DG025500 Rh1DG025700 Rh1DG026500 Rh1DG026800 Rh1DG038900 Rh1DG048800 Rh1DG049300 Rh1DG051700 Rh1DG052000 Rh1DG146200 Rh1DG383500 Rh2BG354900 Rh2CG333600 Rh4BG149600 Rh4BG149700 Rh4CG160600
rosa_wichuraiana Rw0G001100 Rw0G001130 Rw0G001180 Rw0G012580 Rw1G003480 Rw1G003540 Rw1G003600 Rw1G003640 Rw1G003670 Rw1G003750 Rw1G003940 Rw1G006650 Rw1G034550 Rw1G034560 Rw1G034650 Rw1G034660 Rw1G035170 Rw1G035190 Rw1G037060 Rw2G028210 Rw4G012540 Rw5G026370 Rw7G037900

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 2 cut(s) 149, 2202
AccI GTMKAC 1 cut(s) 137
AccII CGCG 5 cut(s) 164, 1083, 1477, 2705, 2809
AclWI GGATC 5 cut(s) 942, 955, 1300, 2212, 2309
AcsI RAATTY 6 cut(s) 124, 341, 758, 1589, 2294, 2453
AcvI CACGTG 1 cut(s) 920
AcyI GRCGYC 3 cut(s) 88, 277, 437
AdeI CACNNNGTG 1 cut(s) 554
AfaI GTAC 1 cut(s) 1870
AfeI AGCGCT 1 cut(s) 2736
AfiI CCNNNNNNNGG 7 cut(s) 286, 497, 599, 1985, 2384, 2608, 2813
AflII CTTAAG 1 cut(s) 2651
AflIII ACRYGT 4 cut(s) 622, 839, 917, 2235
AjnI CCWGG 2 cut(s) 592, 1403
AleI CACNNNNGTG 1 cut(s) 2706
Alw21I GWGCWC 1 cut(s) 362
Alw26I GTCTC 2 cut(s) 62, 218
AlwI GGATC 5 cut(s) 942, 955, 1300, 2212, 2309
Aor51HI AGCGCT 1 cut(s) 2736
AoxI GGCC 3 cut(s) 1034, 1596, 2142
ApeKI GCWGC 8 cut(s) 1006, 1097, 1484, 1487, 1744, 2179, 2533, 2727
ApoI RAATTY 6 cut(s) 124, 341, 758, 1589, 2294, 2453
ArsI GACNNNNNNTTYG 2 cut(s) 1271, 1303
AseI ATTAAT 1 cut(s) 1911
AspLEI GCGC 3 cut(s) 1477, 2737, 2753
AspS9I GGNCC 5 cut(s) 488, 1786, 2067, 2335, 2447
AsuC2I CCSGG 1 cut(s) 1202
AsuHPI GGTGA 3 cut(s) 1478, 1580, 2260
AsuNHI GCTAGC 1 cut(s) 793
AvaII GGWCC 5 cut(s) 488, 1786, 2067, 2335, 2447
BaeGI GKGCMC 1 cut(s) 2603
BaeI ACNNNNGTAYC 2 cut(s) 915, 948
BamHI GGATCC 1 cut(s) 947
BanII GRGCYC 1 cut(s) 362
BauI CACGAG 1 cut(s) 63
BbrPI CACGTG 1 cut(s) 920
BbsI GAAGAC 3 cut(s) 174, 246, 1109
Bbv12I GWGCWC 1 cut(s) 362
BbvI GCAGC 8 cut(s) 1018, 1084, 1471, 1499, 1731, 2191, 2520, 2714
BccI CCATC 7 cut(s) 203, 448, 937, 1312, 1571, 1828, 2376
BceAI ACGGC 1 cut(s) 2417
BcgI CGANNNNNNTGC 2 cut(s) 1970, 2004
BciT130I CCWGG 2 cut(s) 594, 1405
BciVI GTATCC 1 cut(s) 499
BclI TGATCA 2 cut(s) 982, 2041
BcnI CCSGG 1 cut(s) 1202
BcoDI GTCTC 2 cut(s) 62, 218
BfaI CTAG 4 cut(s) 794, 2136, 2571, 2738
BfmI CTRYAG 1 cut(s) 1485
BfoI RGCGCY 1 cut(s) 2738
BfrI CTTAAG 1 cut(s) 2651
BfuI GTATCC 1 cut(s) 499
BglI GCCNNNNNGGC 1 cut(s) 96
Bme1390I CCNGG 3 cut(s) 594, 1202, 1405
Bme18I GGWCC 5 cut(s) 488, 1786, 2067, 2335, 2447
BmgT120I GGNCC 5 cut(s) 488, 1786, 2067, 2335, 2447
BmiI GGNNCC 4 cut(s) 949, 2068, 2069, 2805
BmrFI CCNGG 3 cut(s) 594, 1202, 1405
BmrI ACTGGG 1 cut(s) 17
BmsI GCATC 7 cut(s) 68, 1543, 1930, 2086, 2113, 2122, 2727
BmtI GCTAGC 1 cut(s) 797
BmuI ACTGGG 1 cut(s) 17
BpiI GAAGAC 3 cut(s) 174, 246, 1109
BplI GAGNNNNNCTC 2 cut(s) 1801, 1833
BpmI CTGGAG 2 cut(s) 615, 2630
Bpu10I CCTNAGC 2 cut(s) 447, 2127
BpuEI CTTGAG 3 cut(s) 376, 2086, 2519
BpuMI CCSGG 1 cut(s) 1202
Bsa29I ATCGAT 1 cut(s) 1960
BsaAI YACGTR 1 cut(s) 920
BsaHI GRCGYC 3 cut(s) 88, 277, 437
BsaI GGTCTC 1 cut(s) 218
BsaJI CCNNGG 4 cut(s) 1081, 2433, 2722, 2807
BsaXI ACNNNNNCTCC 6 cut(s) 1286, 1316, 2603, 2633, 2795, 2825
Bsc4I CCNNNNNNNGG 7 cut(s) 286, 497, 599, 1985, 2384, 2608, 2813
Bse1I ACTGG 6 cut(s) 12, 31, 1195, 1368, 2381, 2613
Bse3DI GCAATG 3 cut(s) 1441, 1883, 2174
BseBI CCWGG 2 cut(s) 594, 1405
BseCI ATCGAT 1 cut(s) 1960
BseDI CCNNGG 4 cut(s) 1081, 2433, 2722, 2807
BseGI GGATG 6 cut(s) 214, 688, 1323, 1534, 2137, 2718
BseLI CCNNNNNNNGG 7 cut(s) 286, 497, 599, 1985, 2384, 2608, 2813
BseMI GCAATG 3 cut(s) 1441, 1883, 2174
BseMII CTCAG 3 cut(s) 229, 375, 1731
BseNI ACTGG 6 cut(s) 12, 31, 1195, 1368, 2381, 2613
BseSI GKGCMC 1 cut(s) 2603
BseXI GCAGC 8 cut(s) 1018, 1084, 1471, 1499, 1731, 2191, 2520, 2714
BsgI GTGCAG 1 cut(s) 1025
Bsh1236I CGCG 5 cut(s) 164, 1083, 1477, 2705, 2809
BshFI GGCC 3 cut(s) 1036, 1598, 2144
BshVI ATCGAT 1 cut(s) 1960
BsiHKAI GWGCWC 1 cut(s) 362
BsiSI CCGG 1 cut(s) 1202
BslFI GGGAC 5 cut(s) 448, 856, 2053, 2101, 2838
BslI CCNNNNNNNGG 7 cut(s) 286, 497, 599, 1985, 2384, 2608, 2813
BsmAI GTCTC 2 cut(s) 62, 218
BsmFI GGGAC 5 cut(s) 448, 856, 2053, 2101, 2838
BsmI GAATGC 2 cut(s) 1009, 1194
BsnI GGCC 3 cut(s) 1036, 1598, 2144
Bso31I GGTCTC 1 cut(s) 218
Bsp1286I GDGCHC 2 cut(s) 362, 2603
Bsp1407I TGTACA 1 cut(s) 1868
Bsp19I CCATGG 1 cut(s) 2722
BspANI GGCC 3 cut(s) 1036, 1598, 2144
BspCNI CTCAG 3 cut(s) 228, 374, 1732
BspDI ATCGAT 1 cut(s) 1960
BspFNI CGCG 5 cut(s) 164, 1083, 1477, 2705, 2809
BspLI GGNNCC 4 cut(s) 949, 2068, 2069, 2805
BspMAI CTGCAG 1 cut(s) 1489
BspOI GCTAGC 1 cut(s) 797
BspPI GGATC 5 cut(s) 942, 955, 1300, 2212, 2309
BspTI CTTAAG 1 cut(s) 2651
BspTNI GGTCTC 1 cut(s) 218
BsrBI CCGCTC 2 cut(s) 149, 2202
BsrDI GCAATG 3 cut(s) 1441, 1883, 2174
BsrGI TGTACA 1 cut(s) 1868
BsrI ACTGG 6 cut(s) 12, 31, 1195, 1368, 2381, 2613
BssECI CCNNGG 4 cut(s) 1081, 2433, 2722, 2807
BssNI GRCGYC 3 cut(s) 88, 277, 437
BssSI CACGAG 1 cut(s) 63
BssT1I CCWWGG 1 cut(s) 2722
Bst2BI CACGAG 1 cut(s) 63
Bst2UI CCWGG 2 cut(s) 594, 1405
Bst4CI ACNGT 4 cut(s) 350, 1248, 1779, 2391
BstACI GRCGYC 3 cut(s) 88, 277, 437
BstAFI CTTAAG 1 cut(s) 2651
BstAUI TGTACA 1 cut(s) 1868
BstBAI YACGTR 1 cut(s) 920
BstC8I GCNNGC 5 cut(s) 795, 1426, 1890, 2474, 2783
BstDEI CTNAG 6 cut(s) 74, 215, 361, 447, 1740, 2127
BstDSI CCRYGG 4 cut(s) 1081, 2433, 2722, 2807
BstF5I GGATG 6 cut(s) 214, 688, 1323, 1534, 2137, 2718
BstFNI CGCG 5 cut(s) 164, 1083, 1477, 2705, 2809
BstH2I RGCGCY 1 cut(s) 2738
BstHHI GCGC 3 cut(s) 1477, 2737, 2753
BstMAI GTCTC 2 cut(s) 62, 218
BstMWI GCNNNNNNNGC 7 cut(s) 96, 1481, 1696, 1889, 2132, 2141, 2724
BstNI CCWGG 2 cut(s) 594, 1405
BstNSI RCATGY 4 cut(s) 626, 843, 2239, 2785
BstSCI CCNGG 3 cut(s) 592, 1200, 1403
BstSFI CTRYAG 1 cut(s) 1485
BstSLI GKGCMC 1 cut(s) 2603
BstUI CGCG 5 cut(s) 164, 1083, 1477, 2705, 2809
BstV1I GCAGC 8 cut(s) 1018, 1084, 1471, 1499, 1731, 2191, 2520, 2714
BstV2I GAAGAC 3 cut(s) 174, 246, 1109
BstX2I RGATCY 2 cut(s) 947, 2314
BstYI RGATCY 2 cut(s) 947, 2314
Bsu15I ATCGAT 1 cut(s) 1960
BsuI GTATCC 1 cut(s) 499
BsuRI GGCC 3 cut(s) 1036, 1598, 2144
BsuTUI ATCGAT 1 cut(s) 1960
BtgI CCRYGG 4 cut(s) 1081, 2433, 2722, 2807
BtsCI GGATG 6 cut(s) 214, 688, 1323, 1534, 2137, 2718
BtsI GCAGTG 1 cut(s) 1384
BtsIMutI CAGTG 3 cut(s) 5, 24, 1384
Cac8I GCNNGC 5 cut(s) 795, 1426, 1890, 2474, 2783
CfoI GCGC 3 cut(s) 1477, 2737, 2753
Cfr13I GGNCC 5 cut(s) 488, 1786, 2067, 2335, 2447
Cfr42I CCGCGG 2 cut(s) 1084, 2810
ClaI ATCGAT 1 cut(s) 1960
CseI GACGC 4 cut(s) 96, 170, 285, 445
Csp6I GTAC 1 cut(s) 1869
CviQI GTAC 1 cut(s) 1869
DdeI CTNAG 6 cut(s) 74, 215, 361, 447, 1740, 2127
DraI TTTAAA 1 cut(s) 426
DraIII CACNNNGTG 1 cut(s) 554
EciI GGCGGA 1 cut(s) 715
Ecl136II GAGCTC 1 cut(s) 360
Eco130I CCWWGG 1 cut(s) 2722
Eco24I GRGCYC 1 cut(s) 362
Eco31I GGTCTC 1 cut(s) 218
Eco47I GGWCC 5 cut(s) 488, 1786, 2067, 2335, 2447
Eco47III AGCGCT 1 cut(s) 2736
Eco53kI GAGCTC 1 cut(s) 360
Eco72I CACGTG 1 cut(s) 920
EcoICRI GAGCTC 1 cut(s) 360
EcoO109I RGGNCCY 2 cut(s) 488, 2067
EcoRI GAATTC 3 cut(s) 124, 758, 2453
EcoRII CCWGG 2 cut(s) 592, 1403
EcoT14I CCWWGG 1 cut(s) 2722
EcoT22I ATGCAT 1 cut(s) 1455
EcoT38I GRGCYC 1 cut(s) 362
ErhI CCWWGG 1 cut(s) 2722
FalI AAGNNNNNCTT 2 cut(s) 30, 62
FaqI GGGAC 5 cut(s) 448, 856, 2053, 2101, 2838
FauI CCCGC 2 cut(s) 1022, 1897
FauNDI CATATG 1 cut(s) 1551
FbaI TGATCA 2 cut(s) 982, 2041
FblI GTMKAC 1 cut(s) 137
FokI GGATG 6 cut(s) 221, 695, 1330, 1521, 2144, 2705
FriOI GRGCYC 1 cut(s) 362
FspBI CTAG 4 cut(s) 794, 2136, 2571, 2738
GlaI GCGC 3 cut(s) 1476, 2736, 2752
GsuI CTGGAG 2 cut(s) 615, 2630
HaeII RGCGCY 1 cut(s) 2738
HaeIII GGCC 3 cut(s) 1036, 1598, 2144
HapII CCGG 1 cut(s) 1202
HgaI GACGC 4 cut(s) 96, 170, 285, 445
HhaI GCGC 3 cut(s) 1477, 2737, 2753
Hin1I GRCGYC 3 cut(s) 88, 277, 437
Hin6I GCGC 3 cut(s) 1475, 2735, 2751
HinP1I GCGC 3 cut(s) 1475, 2735, 2751
HincII GTYRAC 2 cut(s) 562, 2761
HindII GTYRAC 2 cut(s) 562, 2761
HindIII AAGCTT 2 cut(s) 2344, 2648
HinfI GANTC 9 cut(s) 722, 1105, 1174, 1333, 1771, 1945, 1999, 2171, 2494
HpaII CCGG 1 cut(s) 1202
HphI GGTGA 3 cut(s) 1478, 1580, 2260
Hpy166II GTNNAC 6 cut(s) 32, 138, 479, 562, 1130, 2761
Hpy8I GTNNAC 6 cut(s) 32, 138, 479, 562, 1130, 2761
Hpy99I CGWCG 1 cut(s) 279
HpyAV CCTTC 7 cut(s) 479, 495, 1242, 1319, 1319, 1856, 2548
HpyCH4III ACNGT 4 cut(s) 350, 1248, 1779, 2391
HpyCH4IV ACGT 4 cut(s) 919, 1123, 1676, 1968
HpyF10VI GCNNNNNNNGC 7 cut(s) 96, 1481, 1696, 1889, 2132, 2141, 2724
HpyF3I CTNAG 6 cut(s) 74, 215, 361, 447, 1740, 2127
HpySE526I ACGT 4 cut(s) 919, 1123, 1676, 1968
Hsp92I GRCGYC 3 cut(s) 88, 277, 437
HspAI GCGC 3 cut(s) 1475, 2735, 2751
KflI GGGWCCC 1 cut(s) 2067
Ksp22I TGATCA 2 cut(s) 982, 2041
KspI CCGCGG 2 cut(s) 1084, 2810
LmnI GCTCC 4 cut(s) 790, 887, 2803, 2816
Lsp1109I GCAGC 8 cut(s) 1018, 1084, 1471, 1499, 1731, 2191, 2520, 2714
LweI GCATC 7 cut(s) 68, 1543, 1930, 2086, 2113, 2122, 2727
MaeI CTAG 4 cut(s) 794, 2136, 2571, 2738
MaeII ACGT 4 cut(s) 919, 1123, 1676, 1968
MaeIII GTNAC 8 cut(s) 3, 42, 350, 387, 703, 910, 1379, 1672
MbiI CCGCTC 2 cut(s) 149, 2202
MfeI CAATTG 4 cut(s) 176, 962, 1755, 2353
MflI RGATCY 2 cut(s) 947, 2314
MhlI GDGCHC 2 cut(s) 362, 2603
MlyI GAGTC 2 cut(s) 1099, 1183
MmeI TCCRAC 5 cut(s) 93, 186, 660, 865, 2365
Mph1103I ATGCAT 1 cut(s) 1455
MslI CAYNNNNRTG 1 cut(s) 2706
MspA1I CMGCKG 4 cut(s) 1083, 1490, 2182, 2809
MspCI CTTAAG 1 cut(s) 2651
MspI CCGG 1 cut(s) 1202
MspR9I CCNGG 3 cut(s) 594, 1202, 1405
MunI CAATTG 4 cut(s) 176, 962, 1755, 2353
Mva1269I GAATGC 2 cut(s) 1009, 1194
MvaI CCWGG 2 cut(s) 594, 1405
MvnI CGCG 5 cut(s) 164, 1083, 1477, 2705, 2809
MwoI GCNNNNNNNGC 7 cut(s) 96, 1481, 1696, 1889, 2132, 2141, 2724
NciI CCSGG 1 cut(s) 1202
NcoI CCATGG 1 cut(s) 2722
NdeI CATATG 1 cut(s) 1551
NheI GCTAGC 1 cut(s) 793
NlaIV GGNNCC 4 cut(s) 949, 2068, 2069, 2805
NmuCI GTSAC 4 cut(s) 3, 703, 910, 1379
NsiI ATGCAT 1 cut(s) 1455
NspI RCATGY 4 cut(s) 626, 843, 2239, 2785
OliI CACNNNNGTG 1 cut(s) 2706
PaeI GCATGC 1 cut(s) 2785
PciI ACATGT 3 cut(s) 622, 839, 2235
PctI GAATGC 2 cut(s) 1009, 1194
PfeI GAWTC 7 cut(s) 722, 1333, 1771, 1945, 1999, 2171, 2494
PleI GAGTC 2 cut(s) 1099, 1182
PmaCI CACGTG 1 cut(s) 920
PmlI CACGTG 1 cut(s) 920
PpsI GAGTC 2 cut(s) 1099, 1182
Ppu21I YACGTR 1 cut(s) 920
PpuMI RGGWCCY 2 cut(s) 488, 2067
PscI ACATGT 3 cut(s) 622, 839, 2235
PshBI ATTAAT 1 cut(s) 1911
Psp124BI GAGCTC 1 cut(s) 362
Psp5II RGGWCCY 2 cut(s) 488, 2067
Psp6I CCWGG 2 cut(s) 592, 1403
PspCI CACGTG 1 cut(s) 920
PspGI CCWGG 2 cut(s) 592, 1403
PspN4I GGNNCC 4 cut(s) 949, 2068, 2069, 2805
PspPI GGNCC 5 cut(s) 488, 1786, 2067, 2335, 2447
PspPPI RGGWCCY 2 cut(s) 488, 2067
PstI CTGCAG 1 cut(s) 1489
PsuI RGATCY 2 cut(s) 947, 2314
PvuII CAGCTG 2 cut(s) 1490, 2182
RsaI GTAC 1 cut(s) 1870
RsaNI GTAC 1 cut(s) 1869
RseI CAYNNNNRTG 1 cut(s) 2706
SacI GAGCTC 1 cut(s) 362
SacII CCGCGG 2 cut(s) 1084, 2810
Sau96I GGNCC 5 cut(s) 488, 1786, 2067, 2335, 2447
SchI GAGTC 2 cut(s) 1099, 1183
ScrFI CCNGG 3 cut(s) 594, 1202, 1405
SduI GDGCHC 2 cut(s) 362, 2603
SfaNI GCATC 7 cut(s) 68, 1543, 1930, 2086, 2113, 2122, 2727
SfcI CTRYAG 1 cut(s) 1485
Sfr303I CCGCGG 2 cut(s) 1084, 2810
SgrBI CCGCGG 2 cut(s) 1084, 2810
SinI GGWCC 5 cut(s) 488, 1786, 2067, 2335, 2447
SmiMI CAYNNNNRTG 1 cut(s) 2706
SmlI CTYRAG 4 cut(s) 355, 2101, 2498, 2651
SmoI CTYRAG 4 cut(s) 355, 2101, 2498, 2651
SphI GCATGC 1 cut(s) 2785
SspI AATATT 1 cut(s) 2797
SspMI CTAG 4 cut(s) 794, 2136, 2571, 2738
SstI GAGCTC 1 cut(s) 362
StyD4I CCNGG 3 cut(s) 592, 1200, 1403
StyI CCWWGG 1 cut(s) 2722
TaaI ACNGT 4 cut(s) 350, 1248, 1779, 2391
TaiI ACGT 4 cut(s) 922, 1126, 1679, 1971
TaqI TCGA 9 cut(s) 145, 1235, 1960, 1990, 2083, 2207, 2418, 2482, 2541
TatI WGTACW 1 cut(s) 1868
TauI GCSGC 6 cut(s) 1039, 1083, 1636, 1921, 2788, 2809
TfiI GAWTC 7 cut(s) 722, 1333, 1771, 1945, 1999, 2171, 2494
TscAI CASTG 3 cut(s) 12, 31, 1384
TseFI GTSAC 4 cut(s) 3, 703, 910, 1379
TseI GCWGC 8 cut(s) 1006, 1097, 1484, 1487, 1744, 2179, 2533, 2727
Tsp45I GTSAC 4 cut(s) 3, 703, 910, 1379
TspDTI ATGAA 7 cut(s) 557, 1494, 1958, 2163, 2289, 2402, 2712
TspGWI ACGGA 4 cut(s) 421, 1938, 2327, 2475
TspRI CASTG 3 cut(s) 12, 31, 1384
Vha464I CTTAAG 1 cut(s) 2651
VpaK11BI GGWCC 5 cut(s) 488, 1786, 2067, 2335, 2447
VspI ATTAAT 1 cut(s) 1911
XapI RAATTY 6 cut(s) 124, 341, 758, 1589, 2294, 2453
XceI RCATGY 4 cut(s) 626, 843, 2239, 2785
XmiI GTMKAC 1 cut(s) 137
XspI CTAG 4 cut(s) 794, 2136, 2571, 2738
Zsp2I ATGCAT 1 cut(s) 1455
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.