disease resistance
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Rx_N | PF18052 | 10 - 99 | 2e-19 | Rx N-terminal domain |
| NB-ARC | PF00931 | 190 - 342 | 1.5e-34 | NB-ARC domain |
| WHD_DRP | PF23559 | 425 - 494 | 6.8e-23 | Disease resistance protein Winged helix domain |
| LRR_14 | PF23598 | 560 - 833 | 4.4e-20 | Leucine-rich repeat region |
| LRR_R13L1-DRL21 | PF25019 | 683 - 806 | 1.5e-33 | R13L1/DRL21 LRRs |
| LRR_RPS2 | PF23247 | 1106 - 1222 | 2.5e-06 | Plant disease resistance protein RPS2-like, leucine-rich repeats |
| LRR_RPS2 | PF23247 | 1231 - 1331 | 9e-07 | Plant disease resistance protein RPS2-like, leucine-rich repeats |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 2 cut(s) | 1659, 2688 |
| Acc16I | TGCGCA | 1 cut(s) | 1270 |
| Acc65I | GGTACC | 1 cut(s) | 3061 |
| AccB1I | GGYRCC | 1 cut(s) | 3061 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 450 |
| AccI | GTMKAC | 4 cut(s) | 96, 440, 1143, 3421 |
| AccII | CGCG | 2 cut(s) | 928, 1447 |
| AccIII | TCCGGA | 1 cut(s) | 3136 |
| AclI | AACGTT | 1 cut(s) | 128 |
| AclWI | GGATC | 4 cut(s) | 63, 1306, 2044, 3797 |
| AcoI | YGGCCR | 1 cut(s) | 3602 |
| AcuI | CTGAAG | 5 cut(s) | 290, 443, 1082, 1632, 2627 |
| AcyI | GRCGYC | 1 cut(s) | 82 |
| AdeI | CACNNNGTG | 1 cut(s) | 3836 |
| AfaI | GTAC | 5 cut(s) | 556, 598, 3063, 3344, 4110 |
| AfiI | CCNNNNNNNGG | 9 cut(s) | 91, 450, 494, 1976, 2375, 3058, 3143, 3543, 4001 |
| AflII | CTTAAG | 1 cut(s) | 86 |
| AflIII | ACRYGT | 3 cut(s) | 926, 2226, 2876 |
| AjiI | CACGTC | 1 cut(s) | 741 |
| AjnI | CCWGG | 5 cut(s) | 1570, 2118, 3386, 3832, 4085 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 399, 431, 3229, 3261 |
| AloI | GAACNNNNNNTCC | 3 cut(s) | 29, 3848, 3880 |
| Alw21I | GWGCWC | 2 cut(s) | 771, 2259 |
| Alw26I | GTCTC | 6 cut(s) | 951, 2298, 2477, 3605, 3962, 4014 |
| AlwI | GGATC | 4 cut(s) | 63, 1306, 2044, 3797 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 2503, 2589 |
| Ama87I | CYCGRG | 1 cut(s) | 402 |
| Aor13HI | TCCGGA | 1 cut(s) | 3136 |
| AoxI | GGCC | 5 cut(s) | 1381, 3376, 3602, 4003, 4082 |
| ApeKI | GCWGC | 8 cut(s) | 37, 109, 151, 321, 647, 1103, 1490, 1750 |
| AseI | ATTAAT | 1 cut(s) | 4116 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 848, 3477 |
| Asp718I | GGTACC | 1 cut(s) | 3061 |
| AspLEI | GCGC | 2 cut(s) | 1271, 3739 |
| AspS9I | GGNCC | 5 cut(s) | 64, 485, 1381, 4003, 4083 |
| AsuC2I | CCSGG | 1 cut(s) | 32 |
| AsuHPI | GGTGA | 9 cut(s) | 758, 796, 1252, 1919, 2251, 3071, 3526, 3760, 3848 |
| AsuII | TTCGAA | 3 cut(s) | 1241, 2805, 3845 |
| AvaI | CYCGRG | 1 cut(s) | 402 |
| AvaII | GGWCC | 2 cut(s) | 64, 485 |
| AxyI | CCTNAGG | 1 cut(s) | 3516 |
| BalI | TGGCCA | 1 cut(s) | 3604 |
| BanI | GGYRCC | 1 cut(s) | 3061 |
| BanII | GRGCYC | 2 cut(s) | 771, 3394 |
| BbsI | GAAGAC | 2 cut(s) | 2175, 2949 |
| Bbv12I | GWGCWC | 2 cut(s) | 771, 2259 |
| BbvCI | CCTCAGC | 1 cut(s) | 1971 |
| BbvI | GCAGC | 8 cut(s) | 24, 96, 138, 308, 634, 1090, 1477, 1737 |
| BceAI | ACGGC | 3 cut(s) | 1081, 1368, 2452 |
| BciT130I | CCWGG | 5 cut(s) | 1572, 2120, 3388, 3834, 4087 |
| BcnI | CCSGG | 1 cut(s) | 32 |
| BcoDI | GTCTC | 6 cut(s) | 951, 2298, 2477, 3605, 3962, 4014 |
| BfmI | CTRYAG | 3 cut(s) | 720, 1140, 1491 |
| BfoI | RGCGCY | 1 cut(s) | 3740 |
| BfrI | CTTAAG | 1 cut(s) | 86 |
| BglII | AGATCT | 1 cut(s) | 3872 |
| BisI | GCNGC | 8 cut(s) | 38, 110, 152, 322, 648, 1104, 1491, 1751 |
| BlsI | GCNGC | 8 cut(s) | 39, 111, 153, 323, 649, 1105, 1492, 1752 |
| Bme1390I | CCNGG | 6 cut(s) | 32, 1572, 2120, 3388, 3834, 4087 |
| Bme18I | GGWCC | 2 cut(s) | 64, 485 |
| BmeT110I | CYCGRG | 1 cut(s) | 402 |
| BmgBI | CACGTC | 1 cut(s) | 741 |
| BmgT120I | GGNCC | 5 cut(s) | 64, 485, 1381, 4003, 4083 |
| BmiI | GGNNCC | 2 cut(s) | 3063, 3449 |
| BmrFI | CCNGG | 6 cut(s) | 32, 1572, 2120, 3388, 3834, 4087 |
| BoxI | GACNNNNGTC | 2 cut(s) | 2742, 3462 |
| BpiI | GAAGAC | 2 cut(s) | 2175, 2949 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 51, 83 |
| BpmI | CTGGAG | 1 cut(s) | 3449 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1971 |
| Bpu14I | TTCGAA | 3 cut(s) | 1241, 2805, 3845 |
| BpuEI | CTTGAG | 5 cut(s) | 62, 2510, 3344, 3735, 3971 |
| BpuMI | CCSGG | 1 cut(s) | 32 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1199 |
| BsaHI | GRCGYC | 1 cut(s) | 82 |
| BsaI | GGTCTC | 2 cut(s) | 2298, 2477 |
| BsaJI | CCNNGG | 6 cut(s) | 449, 1435, 2266, 3386, 3387, 4085 |
| BsaWI | WCCGGW | 2 cut(s) | 2614, 3136 |
| BsaXI | ACNNNNNCTCC | 7 cut(s) | 27, 971, 1001, 3848, 3878, 3992, 4022 |
| Bsc4I | CCNNNNNNNGG | 9 cut(s) | 91, 450, 494, 1976, 2375, 3058, 3143, 3543, 4001 |
| Bse118I | RCCGGY | 1 cut(s) | 4080 |
| Bse1I | ACTGG | 4 cut(s) | 627, 2747, 2863, 3012 |
| Bse21I | CCTNAGG | 1 cut(s) | 3516 |
| Bse3DI | GCAATG | 4 cut(s) | 872, 1093, 2000, 2081 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1199 |
| BseAI | TCCGGA | 1 cut(s) | 3136 |
| BseBI | CCWGG | 5 cut(s) | 1572, 2120, 3388, 3834, 4087 |
| BseDI | CCNNGG | 6 cut(s) | 449, 1435, 2266, 3386, 3387, 4085 |
| BseJI | GATNNNNATC | 1 cut(s) | 1199 |
| BseLI | CCNNNNNNNGG | 9 cut(s) | 91, 450, 494, 1976, 2375, 3058, 3143, 3543, 4001 |
| BseMI | GCAATG | 4 cut(s) | 872, 1093, 2000, 2081 |
| BseMII | CTCAG | 9 cut(s) | 226, 372, 782, 1985, 2789, 3432, 3507, 3911, 4157 |
| BseNI | ACTGG | 4 cut(s) | 627, 2747, 2863, 3012 |
| BseRI | GAGGAG | 6 cut(s) | 179, 1959, 2882, 3299, 4013, 4038 |
| BseXI | GCAGC | 8 cut(s) | 24, 96, 138, 308, 634, 1090, 1477, 1737 |
| BseYI | CCCAGC | 2 cut(s) | 2126, 3692 |
| Bsh1236I | CGCG | 2 cut(s) | 928, 1447 |
| BshFI | GGCC | 5 cut(s) | 1383, 3378, 3604, 4005, 4084 |
| BshNI | GGYRCC | 1 cut(s) | 3061 |
| BsiHKAI | GWGCWC | 2 cut(s) | 771, 2259 |
| BsiHKCI | CYCGRG | 1 cut(s) | 402 |
| BsiSI | CCGG | 6 cut(s) | 32, 1353, 2277, 2615, 3137, 4081 |
| BslFI | GGGAC | 5 cut(s) | 2092, 2143, 2577, 3503, 3534 |
| BslI | CCNNNNNNNGG | 9 cut(s) | 91, 450, 494, 1976, 2375, 3058, 3143, 3543, 4001 |
| BsmAI | GTCTC | 6 cut(s) | 951, 2298, 2477, 3605, 3962, 4014 |
| BsmBI | CGTCTC | 1 cut(s) | 3605 |
| BsmFI | GGGAC | 5 cut(s) | 2092, 2143, 2577, 3503, 3534 |
| BsmI | GAATGC | 2 cut(s) | 23, 1722 |
| BsnI | GGCC | 5 cut(s) | 1383, 3378, 3604, 4005, 4084 |
| Bso31I | GGTCTC | 2 cut(s) | 2298, 2477 |
| BsoBI | CYCGRG | 1 cut(s) | 402 |
| Bsp119I | TTCGAA | 3 cut(s) | 1241, 2805, 3845 |
| Bsp1286I | GDGCHC | 3 cut(s) | 771, 2259, 3394 |
| Bsp13I | TCCGGA | 1 cut(s) | 3136 |
| Bsp19I | CCATGG | 1 cut(s) | 449 |
| Bsp68I | TCGCGA | 1 cut(s) | 1447 |
| BspANI | GGCC | 5 cut(s) | 1383, 3378, 3604, 4005, 4084 |
| BspCNI | CTCAG | 9 cut(s) | 225, 371, 783, 1984, 2790, 3433, 3508, 3912, 4156 |
| BspEI | TCCGGA | 1 cut(s) | 3136 |
| BspFNI | CGCG | 2 cut(s) | 928, 1447 |
| BspHI | TCATGA | 3 cut(s) | 1932, 2698, 2820 |
| BspLI | GGNNCC | 2 cut(s) | 3063, 3449 |
| BspMAI | CTGCAG | 2 cut(s) | 724, 1495 |
| BspPI | GGATC | 4 cut(s) | 63, 1306, 2044, 3797 |
| BspT104I | TTCGAA | 3 cut(s) | 1241, 2805, 3845 |
| BspT107I | GGYRCC | 1 cut(s) | 3061 |
| BspTI | CTTAAG | 1 cut(s) | 86 |
| BspTNI | GGTCTC | 2 cut(s) | 2298, 2477 |
| BsrDI | GCAATG | 4 cut(s) | 872, 1093, 2000, 2081 |
| BsrFI | RCCGGY | 1 cut(s) | 4080 |
| BsrI | ACTGG | 4 cut(s) | 627, 2747, 2863, 3012 |
| BssAI | RCCGGY | 1 cut(s) | 4080 |
| BssECI | CCNNGG | 6 cut(s) | 449, 1435, 2266, 3386, 3387, 4085 |
| BssNI | GRCGYC | 1 cut(s) | 82 |
| BssT1I | CCWWGG | 3 cut(s) | 449, 1435, 2266 |
| Bst2UI | CCWGG | 5 cut(s) | 1572, 2120, 3388, 3834, 4087 |
| Bst4CI | ACNGT | 9 cut(s) | 962, 1141, 1254, 1785, 2591, 3347, 3525, 3662, 3797 |
| Bst6I | CTCTTC | 3 cut(s) | 384, 3096, 4053 |
| BstACI | GRCGYC | 1 cut(s) | 82 |
| BstAFI | CTTAAG | 1 cut(s) | 86 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 321 |
| BstBI | TTCGAA | 3 cut(s) | 1241, 2805, 3845 |
| BstC8I | GCNNGC | 2 cut(s) | 808, 2530 |
| BstDSI | CCRYGG | 1 cut(s) | 449 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 3056 |
| BstFNI | CGCG | 2 cut(s) | 928, 1447 |
| BstH2I | RGCGCY | 1 cut(s) | 3740 |
| BstHHI | GCGC | 2 cut(s) | 1271, 3739 |
| BstMAI | GTCTC | 6 cut(s) | 951, 2298, 2477, 3605, 3962, 4014 |
| BstMWI | GCNNNNNNNGC | 8 cut(s) | 143, 321, 941, 1487, 1972, 2132, 2992, 4169 |
| BstNI | CCWGG | 5 cut(s) | 1572, 2120, 3388, 3834, 4087 |
| BstNSI | RCATGY | 2 cut(s) | 2230, 2880 |
| BstPAI | GACNNNNGTC | 2 cut(s) | 2742, 3462 |
| BstSCI | CCNGG | 6 cut(s) | 30, 1570, 2118, 3386, 3832, 4085 |
| BstSFI | CTRYAG | 3 cut(s) | 720, 1140, 1491 |
| BstUI | CGCG | 2 cut(s) | 928, 1447 |
| BstV1I | GCAGC | 8 cut(s) | 24, 96, 138, 308, 634, 1090, 1477, 1737 |
| BstV2I | GAAGAC | 2 cut(s) | 2175, 2949 |
| BstX2I | RGATCY | 2 cut(s) | 3789, 3872 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 675, 2126 |
| BstYI | RGATCY | 2 cut(s) | 3789, 3872 |
| Bsu36I | CCTNAGG | 1 cut(s) | 3516 |
| BsuRI | GGCC | 5 cut(s) | 1383, 3378, 3604, 4005, 4084 |
| BtgI | CCRYGG | 1 cut(s) | 449 |
| BtrI | CACGTC | 1 cut(s) | 741 |
| BtsIMutI | CAGTG | 1 cut(s) | 620 |
| BtuMI | TCGCGA | 1 cut(s) | 1447 |
| Cac8I | GCNNGC | 2 cut(s) | 808, 2530 |
| CaiI | CAGNNNCTG | 2 cut(s) | 2503, 2589 |
| CciI | TCATGA | 3 cut(s) | 1932, 2698, 2820 |
| CfoI | GCGC | 2 cut(s) | 1271, 3739 |
| Cfr10I | RCCGGY | 1 cut(s) | 4080 |
| Cfr13I | GGNCC | 5 cut(s) | 64, 485, 1381, 4003, 4083 |
| CseI | GACGC | 5 cut(s) | 90, 653, 934, 1913, 2132 |
| CsiI | ACCWGGT | 1 cut(s) | 3832 |
| Csp6I | GTAC | 5 cut(s) | 555, 597, 3062, 3343, 4109 |
| CviQI | GTAC | 5 cut(s) | 555, 597, 3062, 3343, 4109 |
| DraI | TTTAAA | 2 cut(s) | 1032, 2142 |
| DraIII | CACNNNGTG | 1 cut(s) | 3836 |
| EaeI | YGGCCR | 1 cut(s) | 3602 |
| Eam1104I | CTCTTC | 3 cut(s) | 384, 3096, 4053 |
| EarI | CTCTTC | 3 cut(s) | 384, 3096, 4053 |
| EciI | GGCGGA | 2 cut(s) | 68, 871 |
| Ecl136II | GAGCTC | 1 cut(s) | 769 |
| Eco130I | CCWWGG | 3 cut(s) | 449, 1435, 2266 |
| Eco24I | GRGCYC | 2 cut(s) | 771, 3394 |
| Eco31I | GGTCTC | 2 cut(s) | 2298, 2477 |
| Eco32I | GATATC | 2 cut(s) | 1736, 2649 |
| Eco47I | GGWCC | 2 cut(s) | 64, 485 |
| Eco53kI | GAGCTC | 1 cut(s) | 769 |
| Eco57I | CTGAAG | 5 cut(s) | 290, 443, 1082, 1632, 2627 |
| Eco81I | CCTNAGG | 1 cut(s) | 3516 |
| Eco88I | CYCGRG | 1 cut(s) | 402 |
| EcoICRI | GAGCTC | 1 cut(s) | 769 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 3056 |
| EcoO109I | RGGNCCY | 2 cut(s) | 64, 4003 |
| EcoRI | GAATTC | 2 cut(s) | 1936, 3841 |
| EcoRII | CCWGG | 5 cut(s) | 1570, 2118, 3386, 3832, 4085 |
| EcoRV | GATATC | 2 cut(s) | 1736, 2649 |
| EcoT14I | CCWWGG | 3 cut(s) | 449, 1435, 2266 |
| EcoT22I | ATGCAT | 2 cut(s) | 317, 1461 |
| EcoT38I | GRGCYC | 2 cut(s) | 771, 3394 |
| ErhI | CCWWGG | 3 cut(s) | 449, 1435, 2266 |
| Esp3I | CGTCTC | 1 cut(s) | 3605 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1666, 1698 |
| FaqI | GGGAC | 5 cut(s) | 2092, 2143, 2577, 3503, 3534 |
| FblI | GTMKAC | 4 cut(s) | 96, 440, 1143, 3421 |
| Fnu4HI | GCNGC | 8 cut(s) | 38, 110, 152, 322, 648, 1104, 1491, 1751 |
| FriOI | GRGCYC | 2 cut(s) | 771, 3394 |
| Fsp4HI | GCNGC | 8 cut(s) | 38, 110, 152, 322, 648, 1104, 1491, 1751 |
| FspI | TGCGCA | 1 cut(s) | 1270 |
| GlaI | GCGC | 2 cut(s) | 1270, 3738 |
| GluI | GCNGC | 8 cut(s) | 38, 110, 152, 322, 648, 1104, 1491, 1751 |
| GsaI | CCCAGC | 2 cut(s) | 2130, 3696 |
| GsuI | CTGGAG | 1 cut(s) | 3449 |
| HaeII | RGCGCY | 1 cut(s) | 3740 |
| HaeIII | GGCC | 5 cut(s) | 1383, 3378, 3604, 4005, 4084 |
| HapII | CCGG | 6 cut(s) | 32, 1353, 2277, 2615, 3137, 4081 |
| HgaI | GACGC | 5 cut(s) | 90, 653, 934, 1913, 2132 |
| HhaI | GCGC | 2 cut(s) | 1271, 3739 |
| Hin1I | GRCGYC | 1 cut(s) | 82 |
| Hin6I | GCGC | 2 cut(s) | 1269, 3737 |
| HinP1I | GCGC | 2 cut(s) | 1269, 3737 |
| HincII | GTYRAC | 7 cut(s) | 97, 132, 714, 2360, 2775, 3467, 3585 |
| HindII | GTYRAC | 7 cut(s) | 97, 132, 714, 2360, 2775, 3467, 3585 |
| HindIII | AAGCTT | 7 cut(s) | 1775, 2475, 2573, 2621, 2827, 3980, 4170 |
| HpaII | CCGG | 6 cut(s) | 32, 1353, 2277, 2615, 3137, 4081 |
| HphI | GGTGA | 9 cut(s) | 758, 796, 1252, 1919, 2251, 3071, 3526, 3760, 3848 |
| Hpy99I | CGWCG | 3 cut(s) | 647, 928, 1193 |
| HpyCH4III | ACNGT | 9 cut(s) | 962, 1141, 1254, 1785, 2591, 3347, 3525, 3662, 3797 |
| HpyCH4IV | ACGT | 5 cut(s) | 128, 740, 1129, 1483, 3025 |
| HpyF10VI | GCNNNNNNNGC | 8 cut(s) | 143, 321, 941, 1487, 1972, 2132, 2992, 4169 |
| HpySE526I | ACGT | 5 cut(s) | 128, 740, 1129, 1483, 3025 |
| Hsp92I | GRCGYC | 1 cut(s) | 82 |
| HspAI | GCGC | 2 cut(s) | 1269, 3737 |
| Kpn2I | TCCGGA | 1 cut(s) | 3136 |
| KpnI | GGTACC | 1 cut(s) | 3065 |
| LmnI | GCTCC | 3 cut(s) | 896, 2869, 2992 |
| Lsp1109I | GCAGC | 8 cut(s) | 24, 96, 138, 308, 634, 1090, 1477, 1737 |
| MabI | ACCWGGT | 1 cut(s) | 3832 |
| MaeII | ACGT | 5 cut(s) | 128, 740, 1129, 1483, 3025 |
| MaeIII | GTNAC | 9 cut(s) | 736, 919, 1056, 1385, 1678, 1925, 2192, 2229, 2459 |
| MfeI | CAATTG | 7 cut(s) | 1217, 1307, 1761, 2381, 2996, 3711, 3891 |
| MflI | RGATCY | 2 cut(s) | 3789, 3872 |
| MhlI | GDGCHC | 3 cut(s) | 771, 2259, 3394 |
| MlsI | TGGCCA | 1 cut(s) | 3604 |
| MluI | ACGCGT | 1 cut(s) | 926 |
| MluNI | TGGCCA | 1 cut(s) | 3604 |
| MlyI | GAGTC | 7 cut(s) | 989, 1105, 1529, 1820, 2189, 3759, 3964 |
| MmeI | TCCRAC | 4 cut(s) | 874, 983, 1212, 2970 |
| Mox20I | TGGCCA | 1 cut(s) | 3604 |
| Mph1103I | ATGCAT | 2 cut(s) | 317, 1461 |
| MroI | TCCGGA | 1 cut(s) | 3136 |
| MroXI | GAANNNNTTC | 2 cut(s) | 848, 3477 |
| MscI | TGGCCA | 1 cut(s) | 3604 |
| MslI | CAYNNNNRTG | 1 cut(s) | 1901 |
| Msp20I | TGGCCA | 1 cut(s) | 3604 |
| MspA1I | CMGCKG | 2 cut(s) | 321, 3427 |
| MspCI | CTTAAG | 1 cut(s) | 86 |
| MspI | CCGG | 6 cut(s) | 32, 1353, 2277, 2615, 3137, 4081 |
| MspR9I | CCNGG | 6 cut(s) | 32, 1572, 2120, 3388, 3834, 4087 |
| MunI | CAATTG | 7 cut(s) | 1217, 1307, 1761, 2381, 2996, 3711, 3891 |
| Mva1269I | GAATGC | 2 cut(s) | 23, 1722 |
| MvaI | CCWGG | 5 cut(s) | 1572, 2120, 3388, 3834, 4087 |
| MvnI | CGCG | 2 cut(s) | 928, 1447 |
| MwoI | GCNNNNNNNGC | 8 cut(s) | 143, 321, 941, 1487, 1972, 2132, 2992, 4169 |
| NciI | CCSGG | 1 cut(s) | 32 |
| NcoI | CCATGG | 1 cut(s) | 449 |
| NlaIV | GGNNCC | 2 cut(s) | 3063, 3449 |
| NmuCI | GTSAC | 5 cut(s) | 736, 919, 1385, 1925, 2192 |
| NruI | TCGCGA | 1 cut(s) | 1447 |
| NsbI | TGCGCA | 1 cut(s) | 1270 |
| NsiI | ATGCAT | 2 cut(s) | 317, 1461 |
| NspI | RCATGY | 2 cut(s) | 2230, 2880 |
| NspV | TTCGAA | 3 cut(s) | 1241, 2805, 3845 |
| PaeR7I | CTCGAG | 1 cut(s) | 402 |
| PagI | TCATGA | 3 cut(s) | 1932, 2698, 2820 |
| PasI | CCCWGGG | 1 cut(s) | 3387 |
| PciI | ACATGT | 2 cut(s) | 2226, 2876 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 932, 3966 |
| PctI | GAATGC | 2 cut(s) | 23, 1722 |
| PdmI | GAANNNNTTC | 2 cut(s) | 848, 3477 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 450 |
| PfoI | TCCNGGA | 1 cut(s) | 2118 |
| PkrI | GCNGC | 8 cut(s) | 39, 111, 153, 323, 649, 1105, 1492, 1752 |
| PleI | GAGTC | 7 cut(s) | 988, 1105, 1529, 1820, 2189, 3759, 3963 |
| PpsI | GAGTC | 7 cut(s) | 988, 1105, 1529, 1820, 2189, 3759, 3963 |
| PpuMI | RGGWCCY | 1 cut(s) | 64 |
| PscI | ACATGT | 2 cut(s) | 2226, 2876 |
| PshAI | GACNNNNGTC | 2 cut(s) | 2742, 3462 |
| PshBI | ATTAAT | 1 cut(s) | 4116 |
| PsiI | TTATAA | 2 cut(s) | 1659, 2688 |
| Psp124BI | GAGCTC | 1 cut(s) | 771 |
| Psp1406I | AACGTT | 1 cut(s) | 128 |
| Psp5II | RGGWCCY | 1 cut(s) | 64 |
| Psp6I | CCWGG | 5 cut(s) | 1570, 2118, 3386, 3832, 4085 |
| PspFI | CCCAGC | 2 cut(s) | 2126, 3692 |
| PspGI | CCWGG | 5 cut(s) | 1570, 2118, 3386, 3832, 4085 |
| PspN4I | GGNNCC | 2 cut(s) | 3063, 3449 |
| PspPI | GGNCC | 5 cut(s) | 64, 485, 1381, 4003, 4083 |
| PspPPI | RGGWCCY | 1 cut(s) | 64 |
| PstI | CTGCAG | 2 cut(s) | 724, 1495 |
| PstNI | CAGNNNCTG | 2 cut(s) | 2503, 2589 |
| PsuI | RGATCY | 2 cut(s) | 3789, 3872 |
| PvuII | CAGCTG | 2 cut(s) | 321, 3427 |
| RruI | TCGCGA | 1 cut(s) | 1447 |
| RsaI | GTAC | 5 cut(s) | 556, 598, 3063, 3344, 4110 |
| RsaNI | GTAC | 5 cut(s) | 555, 597, 3062, 3343, 4109 |
| RseI | CAYNNNNRTG | 1 cut(s) | 1901 |
| SacI | GAGCTC | 1 cut(s) | 771 |
| SalI | GTCGAC | 1 cut(s) | 95 |
| SatI | GCNGC | 8 cut(s) | 38, 110, 152, 322, 648, 1104, 1491, 1751 |
| Sau96I | GGNCC | 5 cut(s) | 64, 485, 1381, 4003, 4083 |
| SchI | GAGTC | 7 cut(s) | 989, 1105, 1529, 1820, 2189, 3759, 3964 |
| ScrFI | CCNGG | 6 cut(s) | 32, 1572, 2120, 3388, 3834, 4087 |
| SduI | GDGCHC | 3 cut(s) | 771, 2259, 3394 |
| SexAI | ACCWGGT | 1 cut(s) | 3832 |
| SfcI | CTRYAG | 3 cut(s) | 720, 1140, 1491 |
| Sfr274I | CTCGAG | 1 cut(s) | 402 |
| SfuI | TTCGAA | 3 cut(s) | 1241, 2805, 3845 |
| SinI | GGWCC | 2 cut(s) | 64, 485 |
| SlaI | CTCGAG | 1 cut(s) | 402 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 1901 |
| SmlI | CTYRAG | 7 cut(s) | 41, 86, 402, 2489, 3323, 3750, 3950 |
| SmoI | CTYRAG | 7 cut(s) | 41, 86, 402, 2489, 3323, 3750, 3950 |
| SspI | AATATT | 1 cut(s) | 1161 |
| SstI | GAGCTC | 1 cut(s) | 771 |
| StyD4I | CCNGG | 6 cut(s) | 30, 1570, 2118, 3386, 3832, 4085 |
| StyI | CCWWGG | 3 cut(s) | 449, 1435, 2266 |
| TaaI | ACNGT | 9 cut(s) | 962, 1141, 1254, 1785, 2591, 3347, 3525, 3662, 3797 |
| TaiI | ACGT | 5 cut(s) | 131, 743, 1132, 1486, 3028 |
| TaqII | GACCGA | 1 cut(s) | 3534 |
| TscAI | CASTG | 1 cut(s) | 627 |
| TseFI | GTSAC | 5 cut(s) | 736, 919, 1385, 1925, 2192 |
| TseI | GCWGC | 8 cut(s) | 37, 109, 151, 321, 647, 1103, 1490, 1750 |
| Tsp45I | GTSAC | 5 cut(s) | 736, 919, 1385, 1925, 2192 |
| TspGWI | ACGGA | 1 cut(s) | 1884 |
| TspRI | CASTG | 1 cut(s) | 627 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 450 |
| Vha464I | CTTAAG | 1 cut(s) | 86 |
| VpaK11BI | GGWCC | 2 cut(s) | 64, 485 |
| VspI | ATTAAT | 1 cut(s) | 4116 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 3056 |
| XbaI | TCTAGA | 2 cut(s) | 829, 1508 |
| XceI | RCATGY | 2 cut(s) | 2230, 2880 |
| XhoI | CTCGAG | 1 cut(s) | 402 |
| XmiI | GTMKAC | 4 cut(s) | 96, 440, 1143, 3421 |
| XmnI | GAANNNNTTC | 2 cut(s) | 848, 3477 |
| Zsp2I | ATGCAT | 2 cut(s) | 317, 1461 |