pycom11g02460

disease resistance

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr11
Physical Location & Seq
Forward (+)
2069191 .. 2071186
1996 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom11g02460.2

Sequence Viewer

Length: 1653 bp
ATGGCTTTTCTTGTGTCATTCCTCCAAGTGCTGGTTGACAAGTTGGCGCGTCGCGACGTCTTGAAGTACTATGGACTCGTAAAAAGCGTCGATAAGAAACTGACGGAATGGATTGCCACCTTGTCTGCAATTGGAGCTGTGCTGATTGACGCGGAGAAAAGGCAACTGGCGGATGAGAGCAACATACTGAAGCTCTGGCTCGATGATCTGAGGGACTTGGCTTTTGATGCGGAAGACGTGTTGGATAAATATCATACTGAAATGTTGAAACGTCGGATACAGCATGCTCATTCCAGCGCAACAAGCAAAGCATGGAAACCATTTCCTAATGGTGTTTTCAACTTGAAGATGAACTCAGACATACAGAAGATTACTGAGCGATTACAAAAGATATCCGTACAAAAAGACCAGCTCGGTTTGAAAATCGATACTGTGATGTTGACTACAAGGGCACGCCAACACATACCGCCTAGTTCTAGTCTACCAGATGGACCTGTGATTGGAAGGGAGGAGGACAAAAGGAAGATTGTTGAGCTGCTGTCAAAACAAGAGCATCGTGCTGTCAATTTCGATGTAGTTGCAATTGTTGGTATGGCTGGAGTCGGAAAGACAACACTCGCCGGACAAGTACTCAAAGATATGGATGCAACCCAAATGTTTCAACCAGCCGTTTGGGTGTGCGTATCTGACGACTTCAACCTTGAAAGAGTGACAAAGCAAATTCTTCAATCAATCACGTCTCGGCAATATACCACAGAAGATTTTGAGAAGGTTCAAAATGATCCTCATAAGGAGTTAGCGGGGAAGAAGTTTTTAATTGTTTTAGACGATGTTTGGAAAACGTGTAGCTACGGTGAATGGAGGAAGCTGCAGTCCCCTTTTCGTGATGGAGCACAAGGAAGCAAGATAGTTGTGACAACACGTGATACAGATGTTTCAAAAATGATGGGAGCTGCCACGCTGGTTCACAATTTGGTGCCTATGGAAAATGATGTTTGTTTGCAAGTATTTGAGCAGCATGCGTTCTTGAATGCTAACGACGACAGACCACCAAACTACGAGTTACTTAAGGAGAAAATTGTTGCAAAGTGTAGGGGATTGCCTTTGGCCGCGAGTACCCTCGGTGGTTTTCTACTTCGTAAAGAAATAGACGAATGGGAAGAAATATTGAACAAGAAGTTGTGGAGTCTCTCAAATGAGCATGACATACTTCCCGTGTTGAGACTAAGTTACTTTTATCTTCCTTCACATTTGAAAAGATGCTTTGCCTATTGCTCAATACTTCCAAATGACTATGAATTCGGGGAGATGCAAATGATCCTTCTGTGGATGGCCGAGGGTTTGATTCATCATCGACCAGAAGATAATAAGCAAATTGAAGATTTAGGTGCTGATTATTTTCGGGAGCTCGTATCTAGGTCATTGTTTCAAAAGTCAACCAAAGATACTTCAAAATATGTGATGCATGACCTCATTGGTGATTTAGCAAGATGGGCCGCTGGAGATATTTGTTTTAGATTGGAGGATAAGCAAAATAATGATGGTGTACAACTGAAACCGAAGGCACGCCATTCGTCTTACCTTATGGGTCCTTATGATGGGGTTAAAAGATTTGAGGTGCATCTTCGTTGGAAGGAATGCCTTCGCAACTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

551

Amino Acids

63.14

Weight (kDa)

7.24

Isoelectric Point (pI)

45.15

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000070)

Species Orthologous Gene IDs
fragaria_vesca FvH4_7g00360 FvH4_7g00850 FvH4_7g02400 FvH4_7g02430 FvH4_7g02450 FvH4_7g25671 FvH4_7g25680 FvH4_7g25683 FvH4_7g26980 FvH4_7g27330 FvH4_7g27355 FvH4_7g27610 FvH4_7g27642 FvH4_7g27890 FvH4_7g27891 FvH4_7g27891 FvH4_7g27891 FvH4_7g28110 FvH4_7g28390
malus_domestica MD00G1070800.v1.1 MD00G1168000.v1.1 MD00G1168300.v1.1 MD00G1168700.v1.1 MD02G1293100.v1.1 MD02G1293200.v1.1 MD02G1314300.v1.1 MD03G1009000.v1.1 MD03G1009400.v1.1 MD03G1042300.v1.1 MD03G1042400.v1.1 MD07G1033600.v1.1 MD07G1033700.v1.1 MD07G1033900.v1.1 MD11G1011400.v1.1 MD11G1011700.v1.1 MD11G1029800.v1.1 MD11G1029900.v1.1 MD11G1030300.v1.1 MD11G1030400.v1.1 MD11G1030500.v1.1 MD11G1031300.v1.1 MD11G1031600.v1.1 MD11G1032000.v1.1 MD11G1033200.v1.1 MD11G1033600.v1.1 MD11G1033800.v1.1 MD11G1033900.v1.1 MD11G1034100.v1.1 MD11G1034400.v1.1 MD11G1040600.v1.1 MD11G1041100.v1.1 MD11G1043100.v1.1 MD11G1043500.v1.1 MD11G1044500.v1.1 MD11G1045100.v1.1 MD11G1045600.v1.1
prunus_persica Prupe.2G022400_v2.0.a1 Prupe.2G022400_v2.0.a1 Prupe.2G022400_v2.0.a1 Prupe.2G022500_v2.0.a1 Prupe.2G022500_v2.0.a1 Prupe.2G022900_v2.0.a1 Prupe.2G023500_v2.0.a1 Prupe.2G023500_v2.0.a1 Prupe.2G023500_v2.0.a1 Prupe.2G023500_v2.0.a1 Prupe.2G023500_v2.0.a1 Prupe.2G023500_v2.0.a1 Prupe.2G023600_v2.0.a1 Prupe.2G028000_v2.0.a1 Prupe.2G030200_v2.0.a1 Prupe.2G067600_v2.0.a1 Prupe.8G117900_v2.0.a1
pyrus_communis pycom02g26350 pycom03g03270 pycom07g02370 pycom11g00750 pycom11g00790 pycom11g02340 pycom11g02370 pycom11g02380 pycom11g02390 pycom11g02410 pycom11g02460 pycom11g02470 pycom11g02500 pycom11g02510 pycom11g02520 pycom11g02530 pycom11g02580 pycom11g02590 pycom11g02680 pycom11g02710 pycom11g02720 pycom11g02730 pycom11g02750 pycom11g02760 pycom11g02770 pycom11g03690 pycom13g25120 pycom13g25130 pycom13g25140 pycom13g25170 pycom13g25180 pycom13g25190 pycom13g25210
rosa_chinensis RchiOBHm_Chr1g0315001 RchiOBHm_Chr1g0315411 RchiOBHm_Chr1g0317951 RchiOBHm_Chr1g0319741 RchiOBHm_Chr1g0319841 RchiOBHm_Chr1g0319911 RchiOBHm_Chr1g0319991 RchiOBHm_Chr1g0320001 RchiOBHm_Chr1g0320021 RchiOBHm_Chr1g0320081 RchiOBHm_Chr1g0320111 RchiOBHm_Chr1g0320131 RchiOBHm_Chr1g0320161 RchiOBHm_Chr1g0320171 RchiOBHm_Chr1g0320241 RchiOBHm_Chr1g0320281 RchiOBHm_Chr1g0320411 RchiOBHm_Chr1g0320461 RchiOBHm_Chr1g0320551 RchiOBHm_Chr1g0320581 RchiOBHm_Chr1g0320661 RchiOBHm_Chr1g0320891 RchiOBHm_Chr1g0320971 RchiOBHm_Chr1g0321021 RchiOBHm_Chr1g0321031 RchiOBHm_Chr1g0321091 RchiOBHm_Chr1g0321351 RchiOBHm_Chr1g0321481 RchiOBHm_Chr1g0321491 RchiOBHm_Chr1g0327521 RchiOBHm_Chr1g0328061 RchiOBHm_Chr1g0334991 RchiOBHm_Chr1g0373781 RchiOBHm_Chr1g0373891 RchiOBHm_Chr1g0374841 RchiOBHm_Chr2g0131111 RchiOBHm_Chr2g0131121 RchiOBHm_Chr4g0408901 RchiOBHm_Chr5g0041691 RchiOBHm_Chr7g0237021
rosa_laevigata RLG00000019168 RLG00000030456 RLG00000030460 RLG00000030571
rosa_multiflora Rmu_co7963468.1_g000001 Rmu_co7991248.1_g000001 Rmu_co8195256.1_g000001 Rmu_co8312199.1_g000001 Rmu_co8349215.1_g000001 Rmu_co8351041.1_g000001 Rmu_co8422719.1_g000001 Rmu_co8450711.1_g000001 Rmu_co8465555.1_g000001 Rmu_co8489965.1_g000001 Rmu_sc0000087.1_g000014 Rmu_sc0000272.1_g000015 Rmu_sc0000724.1_g000006 Rmu_sc0000724.1_g000021 Rmu_sc0000724.1_g000022 Rmu_sc0000861.1_g000024 Rmu_sc0001049.1_g000006 Rmu_sc0001049.1_g000007 Rmu_sc0001512.1_g000001 Rmu_sc0002022.1_g000004 Rmu_sc0002063.1_g000011 Rmu_sc0002131.1_g000024 Rmu_sc0002337.1_g000012 Rmu_sc0002341.1_g000005 Rmu_sc0002539.1_g000117 Rmu_sc0002745.1_g000005 Rmu_sc0002745.1_g000006 Rmu_sc0003145.1_g000002 Rmu_sc0003199.1_g000007 Rmu_sc0003270.1_g000039 Rmu_sc0003270.1_g000040 Rmu_sc0003423.1_g000001 Rmu_sc0003423.1_g000002 Rmu_sc0003629.1_g000067 Rmu_sc0004039.1_g000002 Rmu_sc0004555.1_g000001 Rmu_sc0004555.1_g000005 Rmu_sc0004555.1_g000006 Rmu_sc0004947.1_g000025 Rmu_sc0004947.1_g000026 Rmu_sc0005255.1_g000025 Rmu_sc0007977.1_g000016 Rmu_sc0008752.1_g000005 Rmu_sc0009236.1_g000004 Rmu_sc0009236.1_g000008 Rmu_sc0009236.1_g000009 Rmu_sc0009236.1_g000010 Rmu_sc0011424.1_g000036 Rmu_sc0013413.1_g000001 Rmu_sc0013735.1_g000002 Rmu_sc0015304.1_g000002 Rmu_sc0015304.1_g000003 Rmu_sc0015585.1_g000001 Rmu_sc0018410.1_g000001 Rmu_sc0022723.1_g000001 Rmu_sc0022723.1_g000002 Rmu_sc0022724.1_g000001 Rmu_sc0023430.1_g000001 Rmu_sc0026053.1_g000001 Rmu_sc0026429.1_g000002 Rmu_sc0026647.1_g000001 Rmu_sc0031359.1_g000001 Rmu_ssc0000042.1_g000040 Rmu_ssc0000081.1_g000001 Rmu_ssc0000300.1_g000011
rosa_roxburghii Rroxscaffold_160G00433620 Rroxscaffold_160G00433990 Rroxscaffold_1G00038820 Rroxscaffold_2G00113190 Rroxscaffold_4G00283240 Rroxscaffold_4G00283930 Rroxscaffold_4G00284010 Rroxscaffold_4G00322600 Rroxscaffold_4G00327710 Rroxscaffold_4G00328100 Rroxscaffold_4G00328130 Rroxscaffold_4G00331590 Rroxscaffold_5G00353280
rosa_rugosa Rorug01G0004200 Rorug01G0018800 Rorug01G0018900 Rorug01G0029900 Rorug01G0030000 Rorug01G0030000 Rorug01G0030000 Rorug01G0030200 Rorug01G0030300 Rorug01G0030800 Rorug01G0032400 Rorug01G0032900 Rorug01G0055800 Rorug01G0067600 Rorug01G0067700 Rorug01G0067800 Rorug01G0067900 Rorug01G0068000 Rorug01G0379500 Rorug01G0379600 Rorug01G0379600 Rorug01G0385200 Rorug01G0385300 Rorug02G0295100 Rorug04G0088500 Rorug04G0088600 Rorug05G0194900 Rorug07G0301400
rosa_samantha Rh1AG014800 Rh1AG015200 Rh1AG030500 Rh1AG041800 Rh1AG042300 Rh1AG042700 Rh1AG042800 Rh1AG042900 Rh1AG045000 Rh1AG085100 Rh1AG085200 Rh1AG388600 Rh1AG396700 Rh1AG396900 Rh1BG007300 Rh1BG039200 Rh1BG039600 Rh1BG042800 Rh1BG067300 Rh1BG109700 Rh1BG109900 Rh1BG354000 Rh1CG043800 Rh1CG044400 Rh1DG008600 Rh1DG022900 Rh1DG023400 Rh1DG023600 Rh1DG023900 Rh1DG024100 Rh1DG024400 Rh1DG024500 Rh1DG025500 Rh1DG025700 Rh1DG026500 Rh1DG026800 Rh1DG038900 Rh1DG048800 Rh1DG049300 Rh1DG051700 Rh1DG052000 Rh1DG146200 Rh1DG383500 Rh2BG354900 Rh2CG333600 Rh4BG149600 Rh4BG149700 Rh4CG160600
rosa_wichuraiana Rw0G001100 Rw0G001130 Rw0G001180 Rw0G012580 Rw1G003480 Rw1G003540 Rw1G003600 Rw1G003640 Rw1G003670 Rw1G003750 Rw1G003940 Rw1G006650 Rw1G034550 Rw1G034560 Rw1G034650 Rw1G034660 Rw1G035170 Rw1G035190 Rw1G037060 Rw2G028210 Rw4G012540 Rw5G026370 Rw7G037900

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 60
AccB1I GGYRCC 1 cut(s) 976
AccB7I CCANNNNNTGG 1 cut(s) 31
AccI GTMKAC 1 cut(s) 481
AccII CGCG 4 cut(s) 49, 54, 152, 1112
AciI CCGC 7 cut(s) 152, 170, 230, 467, 800, 1110, 1497
AclWI GGATC 2 cut(s) 776, 1312
AcoI YGGCCR 2 cut(s) 1107, 1332
AcsI RAATTY 2 cut(s) 720, 1298
AcuI CTGAAG 1 cut(s) 209
AcvI CACGTG 1 cut(s) 923
AcyI GRCGYC 1 cut(s) 57
AfaI GTAC 5 cut(s) 68, 399, 630, 1117, 1548
AfiI CCNNNNNNNGG 3 cut(s) 31, 500, 1598
AflII CTTAAG 1 cut(s) 1067
AflIII ACRYGT 3 cut(s) 237, 842, 920
AjiI CACGTC 2 cut(s) 238, 738
AluBI AGCT 8 cut(s) 137, 193, 412, 535, 849, 868, 953, 1408
AluI AGCT 8 cut(s) 137, 193, 412, 535, 849, 868, 953, 1408
Alw21I GWGCWC 2 cut(s) 895, 1410
Alw26I GTCTC 3 cut(s) 744, 1193, 1216
AlwI GGATC 2 cut(s) 776, 1312
AoxI GGCC 3 cut(s) 1107, 1332, 1494
ApeKI GCWGC 4 cut(s) 535, 868, 953, 1015
ApoI RAATTY 2 cut(s) 720, 1298
ArsI GACNNNNNNTTYG 4 cut(s) 206, 238, 1283, 1315
Asp700I GAANNNNTTC 1 cut(s) 1641
AspLEI GCGC 2 cut(s) 49, 299
AspS9I GGNCC 3 cut(s) 491, 1494, 1589
AsuHPI GGTGA 2 cut(s) 866, 1490
AvaII GGWCC 2 cut(s) 491, 1589
BaeGI GKGCMC 1 cut(s) 454
BaeI ACNNNNGTAYC 2 cut(s) 918, 951
BanI GGYRCC 1 cut(s) 976
BanII GRGCYC 1 cut(s) 1410
BbrPI CACGTG 1 cut(s) 923
BbsI GAAGAC 1 cut(s) 240
Bbv12I GWGCWC 2 cut(s) 895, 1410
BbvI GCAGC 4 cut(s) 522, 855, 940, 1027
BccI CCATC 7 cut(s) 482, 881, 940, 1324, 1485, 1535, 1592
BceAI ACGGC 1 cut(s) 653
BcgI CGANNNNNNTGC 4 cut(s) 560, 594, 1554, 1588
BciVI GTATCC 1 cut(s) 270
BcoDI GTCTC 3 cut(s) 744, 1193, 1216
BfaI CTAG 4 cut(s) 471, 477, 1416, 1651
BfmI CTRYAG 1 cut(s) 869
BfrI CTTAAG 1 cut(s) 1067
BfuI GTATCC 1 cut(s) 270
BisI GCNGC 6 cut(s) 536, 869, 954, 1016, 1110, 1497
BlsI GCNGC 6 cut(s) 537, 870, 955, 1017, 1111, 1498
BmcAI AGTACT 2 cut(s) 68, 630
Bme18I GGWCC 2 cut(s) 491, 1589
BmgBI CACGTC 2 cut(s) 238, 738
BmgT120I GGNCC 3 cut(s) 491, 1494, 1589
BmiI GGNNCC 2 cut(s) 978, 1590
BmsI GCATC 7 cut(s) 217, 562, 634, 1250, 1299, 1452, 1630
BpiI GAAGAC 1 cut(s) 240
BpmI CTGGAG 2 cut(s) 618, 1521
Bsa29I ATCGAT 1 cut(s) 426
BsaAI YACGTR 1 cut(s) 923
BsaBI GATNNNNATC 1 cut(s) 249
BsaHI GRCGYC 1 cut(s) 57
BsaJI CCNNGG 2 cut(s) 1120, 1335
Bsc4I CCNNNNNNNGG 3 cut(s) 31, 500, 1598
Bse1I ACTGG 1 cut(s) 171
Bse8I GATNNNNATC 1 cut(s) 249
BseCI ATCGAT 1 cut(s) 426
BseDI CCNNGG 2 cut(s) 1120, 1335
BseGI GGATG 3 cut(s) 178, 649, 1335
BseJI GATNNNNATC 1 cut(s) 249
BseLI CCNNNNNNNGG 3 cut(s) 31, 500, 1598
BseMII CTCAG 3 cut(s) 200, 366, 369
BseNI ACTGG 1 cut(s) 171
BseRI GAGGAG 1 cut(s) 524
BseSI GKGCMC 1 cut(s) 454
BseXI GCAGC 4 cut(s) 522, 855, 940, 1027
Bsh1236I CGCG 4 cut(s) 49, 54, 152, 1112
BshFI GGCC 3 cut(s) 1109, 1334, 1496
BshNI GGYRCC 1 cut(s) 976
BshVI ATCGAT 1 cut(s) 426
BsiHKAI GWGCWC 2 cut(s) 895, 1410
BsiSI CCGG 1 cut(s) 621
BslFI GGGAC 2 cut(s) 227, 859
BslI CCNNNNNNNGG 3 cut(s) 31, 500, 1598
BsmAI GTCTC 3 cut(s) 744, 1193, 1216
BsmBI CGTCTC 1 cut(s) 744
BsmFI GGGAC 2 cut(s) 227, 859
BsmI GAATGC 2 cut(s) 1036, 1643
BsnI GGCC 3 cut(s) 1109, 1334, 1496
Bsp1286I GDGCHC 3 cut(s) 454, 895, 1410
Bsp1407I TGTACA 1 cut(s) 1546
Bsp143I GATC 3 cut(s) 205, 781, 1317
Bsp68I TCGCGA 1 cut(s) 54
BspACI CCGC 7 cut(s) 152, 170, 230, 467, 800, 1110, 1497
BspANI GGCC 3 cut(s) 1109, 1334, 1496
BspCNI CTCAG 3 cut(s) 201, 367, 368
BspDI ATCGAT 1 cut(s) 426
BspFNI CGCG 4 cut(s) 49, 54, 152, 1112
BspLI GGNNCC 2 cut(s) 978, 1590
BspMAI CTGCAG 1 cut(s) 873
BspPI GGATC 2 cut(s) 776, 1312
BspT107I GGYRCC 1 cut(s) 976
BspTI CTTAAG 1 cut(s) 1067
BsrGI TGTACA 1 cut(s) 1546
BsrI ACTGG 1 cut(s) 171
BssECI CCNNGG 2 cut(s) 1120, 1335
BssMI GATC 3 cut(s) 205, 781, 1317
BssNI GRCGYC 1 cut(s) 57
Bst4CI ACNGT 2 cut(s) 433, 854
BstACI GRCGYC 1 cut(s) 57
BstAFI CTTAAG 1 cut(s) 1067
BstAUI TGTACA 1 cut(s) 1546
BstBAI YACGTR 1 cut(s) 923
BstC8I GCNNGC 4 cut(s) 285, 454, 1020, 1567
BstDEI CTNAG 4 cut(s) 209, 355, 375, 1226
BstF5I GGATG 3 cut(s) 178, 649, 1335
BstFNI CGCG 4 cut(s) 49, 54, 152, 1112
BstHHI GCGC 2 cut(s) 49, 299
BstKTI GATC 3 cut(s) 208, 784, 1320
BstMAI GTCTC 3 cut(s) 744, 1193, 1216
BstMBI GATC 3 cut(s) 205, 781, 1317
BstMWI GCNNNNNNNGC 4 cut(s) 134, 227, 303, 1493
BstNSI RCATGY 2 cut(s) 287, 1022
BstSFI CTRYAG 1 cut(s) 869
BstSLI GKGCMC 1 cut(s) 454
BstUI CGCG 4 cut(s) 49, 54, 152, 1112
BstV1I GCAGC 4 cut(s) 522, 855, 940, 1027
BstV2I GAAGAC 1 cut(s) 240
BstXI CCANNNNNNTGG 1 cut(s) 672
Bsu15I ATCGAT 1 cut(s) 426
BsuI GTATCC 1 cut(s) 270
BsuRI GGCC 3 cut(s) 1109, 1334, 1496
BsuTUI ATCGAT 1 cut(s) 426
BtrI CACGTC 2 cut(s) 238, 738
BtsCI GGATG 3 cut(s) 178, 649, 1335
BtuMI TCGCGA 1 cut(s) 54
Cac8I GCNNGC 4 cut(s) 285, 454, 1020, 1567
CfoI GCGC 2 cut(s) 49, 299
Cfr13I GGNCC 3 cut(s) 491, 1494, 1589
ClaI ATCGAT 1 cut(s) 426
CseI GACGC 3 cut(s) 38, 76, 158
Csp6I GTAC 5 cut(s) 67, 398, 629, 1116, 1547
CviAII CATG 5 cut(s) 284, 312, 1019, 1202, 1466
CviQI GTAC 5 cut(s) 67, 398, 629, 1116, 1547
DdeI CTNAG 4 cut(s) 209, 355, 375, 1226
DpnI GATC 3 cut(s) 207, 783, 1319
DpnII GATC 3 cut(s) 205, 781, 1317
EaeI YGGCCR 2 cut(s) 1107, 1332
EciI GGCGGA 1 cut(s) 185
Ecl136II GAGCTC 1 cut(s) 1408
Eco24I GRGCYC 1 cut(s) 1410
Eco32I GATATC 1 cut(s) 393
Eco47I GGWCC 2 cut(s) 491, 1589
Eco53kI GAGCTC 1 cut(s) 1408
Eco57I CTGAAG 1 cut(s) 209
Eco72I CACGTG 1 cut(s) 923
EcoICRI GAGCTC 1 cut(s) 1408
EcoO109I RGGNCCY 1 cut(s) 1589
EcoRI GAATTC 1 cut(s) 1298
EcoRV GATATC 1 cut(s) 393
EcoT22I ATGCAT 1 cut(s) 1467
EcoT38I GRGCYC 1 cut(s) 1410
Esp3I CGTCTC 1 cut(s) 744
FaeI CATG 5 cut(s) 287, 315, 1022, 1205, 1469
FaqI GGGAC 2 cut(s) 227, 859
FatI CATG 5 cut(s) 283, 311, 1018, 1201, 1465
FauI CCCGC 1 cut(s) 793
FblI GTMKAC 1 cut(s) 481
Fnu4HI GCNGC 6 cut(s) 536, 869, 954, 1016, 1110, 1497
FokI GGATG 3 cut(s) 185, 656, 1342
FriOI GRGCYC 1 cut(s) 1410
Fsp4HI GCNGC 6 cut(s) 536, 869, 954, 1016, 1110, 1497
FspBI CTAG 4 cut(s) 471, 477, 1416, 1651
GlaI GCGC 2 cut(s) 48, 298
GluI GCNGC 6 cut(s) 536, 869, 954, 1016, 1110, 1497
GsuI CTGGAG 2 cut(s) 618, 1521
HaeIII GGCC 3 cut(s) 1109, 1334, 1496
HapII CCGG 1 cut(s) 621
HgaI GACGC 3 cut(s) 38, 76, 158
HhaI GCGC 2 cut(s) 49, 299
Hin1I GRCGYC 1 cut(s) 57
Hin1II CATG 5 cut(s) 287, 315, 1022, 1205, 1469
Hin6I GCGC 2 cut(s) 47, 297
HinP1I GCGC 2 cut(s) 47, 297
HincII GTYRAC 3 cut(s) 37, 441, 1437
HindII GTYRAC 3 cut(s) 37, 441, 1437
HinfI GANTC 4 cut(s) 75, 600, 1186, 1345
HpaII CCGG 1 cut(s) 621
HphI GGTGA 2 cut(s) 866, 1490
Hpy166II GTNNAC 6 cut(s) 37, 441, 482, 967, 1437, 1547
Hpy188I TCNGA 5 cut(s) 210, 276, 358, 605, 688
Hpy188III TCNNGA 5 cut(s) 53, 61, 884, 1027, 1403
Hpy8I GTNNAC 6 cut(s) 37, 441, 482, 967, 1437, 1547
Hpy99I CGWCG 5 cut(s) 54, 59, 92, 276, 1043
HpyAV CCTTC 7 cut(s) 498, 763, 1254, 1331, 1555, 1627, 1652
HpyCH4III ACNGT 2 cut(s) 433, 854
HpyCH4IV ACGT 6 cut(s) 57, 237, 271, 737, 842, 922
HpyCH4V TGCA 9 cut(s) 128, 581, 647, 871, 1003, 1085, 1312, 1465, 1621
HpyF10VI GCNNNNNNNGC 4 cut(s) 134, 227, 303, 1493
HpyF3I CTNAG 4 cut(s) 209, 355, 375, 1226
HpySE526I ACGT 6 cut(s) 57, 237, 271, 737, 842, 922
Hsp92I GRCGYC 1 cut(s) 57
Hsp92II CATG 5 cut(s) 287, 315, 1022, 1205, 1469
HspAI GCGC 2 cut(s) 47, 297
Kzo9I GATC 3 cut(s) 205, 781, 1317
LmnI GCTCC 4 cut(s) 134, 890, 950, 1405
Lsp1109I GCAGC 4 cut(s) 522, 855, 940, 1027
LweI GCATC 7 cut(s) 217, 562, 634, 1250, 1299, 1452, 1630
MaeI CTAG 4 cut(s) 471, 477, 1416, 1651
MaeII ACGT 6 cut(s) 57, 237, 271, 737, 842, 922
MaeIII GTNAC 4 cut(s) 709, 913, 1062, 1229
MalI GATC 3 cut(s) 207, 783, 1319
MboI GATC 3 cut(s) 205, 781, 1317
MfeI CAATTG 2 cut(s) 129, 582
MhlI GDGCHC 3 cut(s) 454, 895, 1410
MluCI AATT 9 cut(s) 129, 565, 582, 720, 816, 970, 1077, 1298, 1374
MlyI GAGTC 3 cut(s) 69, 609, 1195
MmeI TCCRAC 4 cut(s) 222, 254, 583, 1610
Mph1103I ATGCAT 1 cut(s) 1467
MroXI GAANNNNTTC 1 cut(s) 1641
MseI TTAA 3 cut(s) 815, 1068, 1605
MspA1I CMGCKG 1 cut(s) 1499
MspCI CTTAAG 1 cut(s) 1067
MspI CCGG 1 cut(s) 621
MunI CAATTG 2 cut(s) 129, 582
Mva1269I GAATGC 2 cut(s) 1036, 1643
MvnI CGCG 4 cut(s) 49, 54, 152, 1112
MwoI GCNNNNNNNGC 4 cut(s) 134, 227, 303, 1493
NdeII GATC 3 cut(s) 205, 781, 1317
NlaIII CATG 5 cut(s) 287, 315, 1022, 1205, 1469
NlaIV GGNNCC 2 cut(s) 978, 1590
NmeAIII GCCGAG 2 cut(s) 721, 1360
NmuCI GTSAC 2 cut(s) 709, 913
NruI TCGCGA 1 cut(s) 54
NsiI ATGCAT 1 cut(s) 1467
NspI RCATGY 2 cut(s) 287, 1022
PaeI GCATGC 2 cut(s) 287, 1022
PcsI WCGNNNNNNNCGW 1 cut(s) 84
PctI GAATGC 2 cut(s) 1036, 1643
PdmI GAANNNNTTC 1 cut(s) 1641
PfeI GAWTC 1 cut(s) 1345
PflMI CCANNNNNTGG 1 cut(s) 31
PkrI GCNGC 6 cut(s) 537, 870, 955, 1017, 1111, 1498
PleI GAGTC 3 cut(s) 69, 608, 1194
PmaCI CACGTG 1 cut(s) 923
PmlI CACGTG 1 cut(s) 923
PpsI GAGTC 3 cut(s) 69, 608, 1194
Ppu21I YACGTR 1 cut(s) 923
PpuMI RGGWCCY 1 cut(s) 1589
Psp124BI GAGCTC 1 cut(s) 1410
Psp5II RGGWCCY 1 cut(s) 1589
PspCI CACGTG 1 cut(s) 923
PspN4I GGNNCC 2 cut(s) 978, 1590
PspPI GGNCC 3 cut(s) 491, 1494, 1589
PspPPI RGGWCCY 1 cut(s) 1589
PstI CTGCAG 1 cut(s) 873
RruI TCGCGA 1 cut(s) 54
RsaI GTAC 5 cut(s) 68, 399, 630, 1117, 1548
RsaNI GTAC 5 cut(s) 67, 398, 629, 1116, 1547
SacI GAGCTC 1 cut(s) 1410
SaqAI TTAA 3 cut(s) 815, 1068, 1605
SatI GCNGC 6 cut(s) 536, 869, 954, 1016, 1110, 1497
Sau3AI GATC 3 cut(s) 205, 781, 1317
Sau96I GGNCC 3 cut(s) 491, 1494, 1589
ScaI AGTACT 2 cut(s) 68, 630
SchI GAGTC 3 cut(s) 69, 609, 1195
SduI GDGCHC 3 cut(s) 454, 895, 1410
SfaNI GCATC 7 cut(s) 217, 562, 634, 1250, 1299, 1452, 1630
SfcI CTRYAG 1 cut(s) 869
SinI GGWCC 2 cut(s) 491, 1589
SmlI CTYRAG 1 cut(s) 1067
SmoI CTYRAG 1 cut(s) 1067
SphI GCATGC 2 cut(s) 287, 1022
Sse9I AATT 9 cut(s) 129, 565, 582, 720, 816, 970, 1077, 1298, 1374
SsiI CCGC 7 cut(s) 152, 170, 230, 467, 800, 1110, 1497
SspI AATATT 1 cut(s) 1167
SspMI CTAG 4 cut(s) 471, 477, 1416, 1651
SstI GAGCTC 1 cut(s) 1410
TaaI ACNGT 2 cut(s) 433, 854
TaiI ACGT 6 cut(s) 60, 240, 274, 740, 845, 925
TaqI TCGA 5 cut(s) 90, 201, 426, 570, 1354
TasI AATT 9 cut(s) 129, 565, 582, 720, 816, 970, 1077, 1298, 1374
TatI WGTACW 3 cut(s) 66, 628, 1546
TauI GCSGC 2 cut(s) 1112, 1499
TfiI GAWTC 1 cut(s) 1345
Tru1I TTAA 3 cut(s) 815, 1068, 1605
Tru9I TTAA 3 cut(s) 815, 1068, 1605
TseFI GTSAC 2 cut(s) 709, 913
TseI GCWGC 4 cut(s) 535, 868, 953, 1015
Tsp45I GTSAC 2 cut(s) 709, 913
TspDTI ATGAA 3 cut(s) 365, 1311, 1337
TspGWI ACGGA 2 cut(s) 119, 385
Van91I CCANNNNNTGG 1 cut(s) 31
Vha464I CTTAAG 1 cut(s) 1067
VpaK11BI GGWCC 2 cut(s) 491, 1589
XapI RAATTY 2 cut(s) 720, 1298
XceI RCATGY 2 cut(s) 287, 1022
XmiI GTMKAC 1 cut(s) 481
XmnI GAANNNNTTC 1 cut(s) 1641
XspI CTAG 4 cut(s) 471, 477, 1416, 1651
ZraI GACGTC 1 cut(s) 58
ZrmI AGTACT 2 cut(s) 68, 630
Zsp2I ATGCAT 1 cut(s) 1467
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.