Rmu_sc0026647.1_g000001

disease resistance

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0026647.1
OG0000070
Physical Location & Seq
Forward (+)
1 .. 2487
2487 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0026647.1_g000001.1.cds

Sequence Viewer

Length: 2487 bp
gaggataaaccgcatggtagatgttctccaaagactcgtcatctggcttacatttctggcaagttcgatggggtaaaaaaaattgagacattttctgaagcaaaacgcttgcggactttcctaccacttcctgtttccagtggttatgggaattatctaactgattatgctacttctgatctattgccacagttgaagtacttgcgggtgctctccttcaatggctataaactgacggagctgccagattccgtatgtaatctgagacatctacggtaccttgatctttctcacacattaataatgagtttgcccgagtcaatatgcatgctttacaacttacagacgttaatattagagaactgttcaaaattgaagacactaccttcaaacatgagcaatttatctaatttacgtcatctcaacaattcaaacacgccttcattggaagaaatgcctccccaagtaagtaggttgactcatctgcaaactgtgcttaattttgtggtggggaaaggtagtgcatcagggcttggagagatagggtcattgcatcttggtgggaccataagccttggaagattggaaaatgtgatcgatgttggggatgtgaagagggccaaaataatgaataaggaagggctggatacattgcaattggaatggagtggcacaagtgagaaggagtcggaggtgctctgcagtttagaacctcataaaaagcttctagacctcaccatcaagggctacaatggtttcgaattttcaaaatggattggacatccttcattctctgatatgacgcatgtgaagttagagaattgtaaaaattgtcgattcttacctcctcttggccaattaccttttctgaaaggactttggatacaaggactggccaatgttaaaagtgtgggtgctgagttttatggagagtgcagcttgccttttccagtgatggaagacctgaggttcgaggatatgcaaaattggaaggagtggcttccttgcaaaacaaatgaagaaattcgagttttcccttgcctgcgacaggtttccatctctagatgcccgaaattgaagtgtttgctatccaagagcatggattcattatcaaagctgtatattgatgaatgtgaagagttggtggtttcaattgccaattataaacatatacataagttgaccatcaacggttgtaaaagggtggttcacagaagcggagttaagtttgagttactggaggttatggggcttcgtgatatttcagagttcagactcgaaatagacgggttcatcagaggattgccaaagcttcaaactttgcggatttctggttgtgaagagttgacatgtttatgggagaatgaggatagatggctgcagcgtcggatttctaatattattggaggcaacatatctgactccccctctcactttattcaagagctaagagcactcaagaaacttgtgctaactggatgctcaaatctaatttcttttccagaagctagttgtccaccttgtcttgaaaaagtaaagatggagtcgtgtaattctttgacatatttcgtaaggtatcaagtaccgccaagcataagaacaatagagatagaaaaatgtcaaaatttgaaactattagtgcaggatgctgacaaaggaggccgacggctcaaatctcttaggataagtgactgtgaacgattggagtcaataataaaaactttccacgaggacacttgtcttgaagatcttaggatatacaggtgtgcaaatctcaaatccttaccagaggggctatgccatctctccgctcttcgcgtgttatatataattgaatgtagaagtctcgtttccttcccaagaggagggttgccatccaacctggcatgcttgtctatctgcagttgtgctcaattggaagccctccccagaggcatggacaaccacagctctcttcagattttgttgttgagatactgtggaggtttggcatccattatagaagagggtttcccacccaacctaattaatcttcgtattggcaatcgcaaaagctgcaagcctctctcagagtgggggcttcaccacttggacagactcacctctcttaaagtcttgtggatcggtggtgtagatccagatctggtgtcctttcctccaaaggaggtgctgctccctaaatctctcattcaactcgtgattggaaggttcccaaatctgaagcgcctgtcatcatcttttcaatcactctcctctcttgaatcccttaacatttgggattgcccaaagctagcatctattattccagaaaaagaggatcatctgcctctttcacttacacagcttcgcatccgtgagggctgtccgctgctcacaaagaaataccaaccaggtaaaggacgacactggcccaaagaaatagcccacatcccttacgtttattttggagactgggaggacgaagccaaagccgaccgcgggctttga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
NB-ARC

Protein Analysis

828

Amino Acids

93.7

Weight (kDa)

8.54

Isoelectric Point (pI)

52.24

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000070)

Species Orthologous Gene IDs
fragaria_vesca FvH4_7g00360 FvH4_7g00850 FvH4_7g02400 FvH4_7g02430 FvH4_7g02450 FvH4_7g25671 FvH4_7g25680 FvH4_7g25683 FvH4_7g26980 FvH4_7g27330 FvH4_7g27355 FvH4_7g27610 FvH4_7g27642 FvH4_7g27890 FvH4_7g27891 FvH4_7g27891 FvH4_7g27891 FvH4_7g28110 FvH4_7g28390
malus_domestica MD00G1070800.v1.1 MD00G1168000.v1.1 MD00G1168300.v1.1 MD00G1168700.v1.1 MD02G1293100.v1.1 MD02G1293200.v1.1 MD02G1314300.v1.1 MD03G1009000.v1.1 MD03G1009400.v1.1 MD03G1042300.v1.1 MD03G1042400.v1.1 MD07G1033600.v1.1 MD07G1033700.v1.1 MD07G1033900.v1.1 MD11G1011400.v1.1 MD11G1011700.v1.1 MD11G1029800.v1.1 MD11G1029900.v1.1 MD11G1030300.v1.1 MD11G1030400.v1.1 MD11G1030500.v1.1 MD11G1031300.v1.1 MD11G1031600.v1.1 MD11G1032000.v1.1 MD11G1033200.v1.1 MD11G1033600.v1.1 MD11G1033800.v1.1 MD11G1033900.v1.1 MD11G1034100.v1.1 MD11G1034400.v1.1 MD11G1040600.v1.1 MD11G1041100.v1.1 MD11G1043100.v1.1 MD11G1043500.v1.1 MD11G1044500.v1.1 MD11G1045100.v1.1 MD11G1045600.v1.1
prunus_persica Prupe.2G022400_v2.0.a1 Prupe.2G022400_v2.0.a1 Prupe.2G022400_v2.0.a1 Prupe.2G022500_v2.0.a1 Prupe.2G022500_v2.0.a1 Prupe.2G022900_v2.0.a1 Prupe.2G023500_v2.0.a1 Prupe.2G023500_v2.0.a1 Prupe.2G023500_v2.0.a1 Prupe.2G023500_v2.0.a1 Prupe.2G023500_v2.0.a1 Prupe.2G023500_v2.0.a1 Prupe.2G023600_v2.0.a1 Prupe.2G028000_v2.0.a1 Prupe.2G030200_v2.0.a1 Prupe.2G067600_v2.0.a1 Prupe.8G117900_v2.0.a1
pyrus_communis pycom02g26350 pycom03g03270 pycom07g02370 pycom11g00750 pycom11g00790 pycom11g02340 pycom11g02370 pycom11g02380 pycom11g02390 pycom11g02410 pycom11g02460 pycom11g02470 pycom11g02500 pycom11g02510 pycom11g02520 pycom11g02530 pycom11g02580 pycom11g02590 pycom11g02680 pycom11g02710 pycom11g02720 pycom11g02730 pycom11g02750 pycom11g02760 pycom11g02770 pycom11g03690 pycom13g25120 pycom13g25130 pycom13g25140 pycom13g25170 pycom13g25180 pycom13g25190 pycom13g25210
rosa_chinensis RchiOBHm_Chr1g0315001 RchiOBHm_Chr1g0315411 RchiOBHm_Chr1g0317951 RchiOBHm_Chr1g0319741 RchiOBHm_Chr1g0319841 RchiOBHm_Chr1g0319911 RchiOBHm_Chr1g0319991 RchiOBHm_Chr1g0320001 RchiOBHm_Chr1g0320021 RchiOBHm_Chr1g0320081 RchiOBHm_Chr1g0320111 RchiOBHm_Chr1g0320131 RchiOBHm_Chr1g0320161 RchiOBHm_Chr1g0320171 RchiOBHm_Chr1g0320241 RchiOBHm_Chr1g0320281 RchiOBHm_Chr1g0320411 RchiOBHm_Chr1g0320461 RchiOBHm_Chr1g0320551 RchiOBHm_Chr1g0320581 RchiOBHm_Chr1g0320661 RchiOBHm_Chr1g0320891 RchiOBHm_Chr1g0320971 RchiOBHm_Chr1g0321021 RchiOBHm_Chr1g0321031 RchiOBHm_Chr1g0321091 RchiOBHm_Chr1g0321351 RchiOBHm_Chr1g0321481 RchiOBHm_Chr1g0321491 RchiOBHm_Chr1g0327521 RchiOBHm_Chr1g0328061 RchiOBHm_Chr1g0334991 RchiOBHm_Chr1g0373781 RchiOBHm_Chr1g0373891 RchiOBHm_Chr1g0374841 RchiOBHm_Chr2g0131111 RchiOBHm_Chr2g0131121 RchiOBHm_Chr4g0408901 RchiOBHm_Chr5g0041691 RchiOBHm_Chr7g0237021
rosa_laevigata RLG00000019168 RLG00000030456 RLG00000030460 RLG00000030571
rosa_multiflora Rmu_co7963468.1_g000001 Rmu_co7991248.1_g000001 Rmu_co8195256.1_g000001 Rmu_co8312199.1_g000001 Rmu_co8349215.1_g000001 Rmu_co8351041.1_g000001 Rmu_co8422719.1_g000001 Rmu_co8450711.1_g000001 Rmu_co8465555.1_g000001 Rmu_co8489965.1_g000001 Rmu_sc0000087.1_g000014 Rmu_sc0000272.1_g000015 Rmu_sc0000724.1_g000006 Rmu_sc0000724.1_g000021 Rmu_sc0000724.1_g000022 Rmu_sc0000861.1_g000024 Rmu_sc0001049.1_g000006 Rmu_sc0001049.1_g000007 Rmu_sc0001512.1_g000001 Rmu_sc0002022.1_g000004 Rmu_sc0002063.1_g000011 Rmu_sc0002131.1_g000024 Rmu_sc0002337.1_g000012 Rmu_sc0002341.1_g000005 Rmu_sc0002539.1_g000117 Rmu_sc0002745.1_g000005 Rmu_sc0002745.1_g000006 Rmu_sc0003145.1_g000002 Rmu_sc0003199.1_g000007 Rmu_sc0003270.1_g000039 Rmu_sc0003270.1_g000040 Rmu_sc0003423.1_g000001 Rmu_sc0003423.1_g000002 Rmu_sc0003629.1_g000067 Rmu_sc0004039.1_g000002 Rmu_sc0004555.1_g000001 Rmu_sc0004555.1_g000005 Rmu_sc0004555.1_g000006 Rmu_sc0004947.1_g000025 Rmu_sc0004947.1_g000026 Rmu_sc0005255.1_g000025 Rmu_sc0007977.1_g000016 Rmu_sc0008752.1_g000005 Rmu_sc0009236.1_g000004 Rmu_sc0009236.1_g000008 Rmu_sc0009236.1_g000009 Rmu_sc0009236.1_g000010 Rmu_sc0011424.1_g000036 Rmu_sc0013413.1_g000001 Rmu_sc0013735.1_g000002 Rmu_sc0015304.1_g000002 Rmu_sc0015304.1_g000003 Rmu_sc0015585.1_g000001 Rmu_sc0018410.1_g000001 Rmu_sc0022723.1_g000001 Rmu_sc0022723.1_g000002 Rmu_sc0022724.1_g000001 Rmu_sc0023430.1_g000001 Rmu_sc0026053.1_g000001 Rmu_sc0026429.1_g000002 Rmu_sc0026647.1_g000001 Rmu_sc0031359.1_g000001 Rmu_ssc0000042.1_g000040 Rmu_ssc0000081.1_g000001 Rmu_ssc0000300.1_g000011
rosa_roxburghii Rroxscaffold_160G00433620 Rroxscaffold_160G00433990 Rroxscaffold_1G00038820 Rroxscaffold_2G00113190 Rroxscaffold_4G00283240 Rroxscaffold_4G00283930 Rroxscaffold_4G00284010 Rroxscaffold_4G00322600 Rroxscaffold_4G00327710 Rroxscaffold_4G00328100 Rroxscaffold_4G00328130 Rroxscaffold_4G00331590 Rroxscaffold_5G00353280
rosa_rugosa Rorug01G0004200 Rorug01G0018800 Rorug01G0018900 Rorug01G0029900 Rorug01G0030000 Rorug01G0030000 Rorug01G0030000 Rorug01G0030200 Rorug01G0030300 Rorug01G0030800 Rorug01G0032400 Rorug01G0032900 Rorug01G0055800 Rorug01G0067600 Rorug01G0067700 Rorug01G0067800 Rorug01G0067900 Rorug01G0068000 Rorug01G0379500 Rorug01G0379600 Rorug01G0379600 Rorug01G0385200 Rorug01G0385300 Rorug02G0295100 Rorug04G0088500 Rorug04G0088600 Rorug05G0194900 Rorug07G0301400
rosa_samantha Rh1AG014800 Rh1AG015200 Rh1AG030500 Rh1AG041800 Rh1AG042300 Rh1AG042700 Rh1AG042800 Rh1AG042900 Rh1AG045000 Rh1AG085100 Rh1AG085200 Rh1AG388600 Rh1AG396700 Rh1AG396900 Rh1BG007300 Rh1BG039200 Rh1BG039600 Rh1BG042800 Rh1BG067300 Rh1BG109700 Rh1BG109900 Rh1BG354000 Rh1CG043800 Rh1CG044400 Rh1DG008600 Rh1DG022900 Rh1DG023400 Rh1DG023600 Rh1DG023900 Rh1DG024100 Rh1DG024400 Rh1DG024500 Rh1DG025500 Rh1DG025700 Rh1DG026500 Rh1DG026800 Rh1DG038900 Rh1DG048800 Rh1DG049300 Rh1DG051700 Rh1DG052000 Rh1DG146200 Rh1DG383500 Rh2BG354900 Rh2CG333600 Rh4BG149600 Rh4BG149700 Rh4CG160600
rosa_wichuraiana Rw0G001100 Rw0G001130 Rw0G001180 Rw0G012580 Rw1G003480 Rw1G003540 Rw1G003600 Rw1G003640 Rw1G003670 Rw1G003750 Rw1G003940 Rw1G006650 Rw1G034550 Rw1G034560 Rw1G034650 Rw1G034660 Rw1G035170 Rw1G035190 Rw1G037060 Rw2G028210 Rw4G012540 Rw5G026370 Rw7G037900

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1164
Acc65I GGTACC 1 cut(s) 276
AccB1I GGYRCC 1 cut(s) 276
AccBSI CCGCTC 1 cut(s) 1811
AccII CGCG 2 cut(s) 1818, 2478
AclWI GGATC 3 cut(s) 2129, 2129, 2325
AcoI YGGCCR 2 cut(s) 853, 894
AcsI RAATTY 3 cut(s) 761, 1023, 1624
AcuI CTGAAG 3 cut(s) 117, 1940, 2240
AfaI GTAC 3 cut(s) 200, 278, 1584
AfiI CCNNNNNNNGG 5 cut(s) 851, 1048, 1865, 2396, 2478
AflIII ACRYGT 1 cut(s) 1349
AjnI CCWGG 2 cut(s) 1881, 2389
AjuI GAANNNNNNNTTGG 2 cut(s) 849, 881
Alw21I GWGCWC 4 cut(s) 213, 699, 1456, 1912
Alw26I GTCTC 4 cut(s) 80, 259, 1850, 2442
AlwI GGATC 3 cut(s) 2129, 2129, 2325
Ama87I CYCGRG 1 cut(s) 314
AoxI GGCC 5 cut(s) 618, 853, 894, 1660, 2408
ApeKI GCWGC 7 cut(s) 241, 936, 1378, 1381, 2055, 2170, 2368
ApoI RAATTY 3 cut(s) 761, 1023, 1624
ArsI GACNNNNNNTTYG 2 cut(s) 953, 985
AseI ATTAAT 2 cut(s) 299, 2028
Asp700I GAANNNNTTC 1 cut(s) 1023
Asp718I GGTACC 1 cut(s) 276
AspLEI GCGC 1 cut(s) 2226
AspS9I GGNCC 3 cut(s) 564, 618, 2409
AsuHPI GGTGA 3 cut(s) 727, 2075, 2092
AsuII TTCGAA 1 cut(s) 759
AsuNHI GCTAGC 1 cut(s) 2290
AvaI CYCGRG 1 cut(s) 314
AvaII GGWCC 1 cut(s) 564
AxyI CCTNAGG 1 cut(s) 965
BalI TGGCCA 2 cut(s) 855, 896
BanI GGYRCC 1 cut(s) 276
BauI CACGAG 2 cut(s) 1727, 2195
BbsI GAAGAC 2 cut(s) 383, 966
Bbv12I GWGCWC 4 cut(s) 213, 699, 1456, 1912
BbvI GCAGC 7 cut(s) 228, 948, 1365, 1393, 2042, 2157, 2355
BccI CCATC 9 cut(s) 62, 746, 949, 1064, 1193, 1368, 1534, 1809, 1882
BceAI ACGGC 1 cut(s) 1682
BciT130I CCWGG 2 cut(s) 1883, 2391
BciVI GTATCC 2 cut(s) 640, 876
BcoDI GTCTC 4 cut(s) 80, 259, 1850, 2442
BfaI CTAG 4 cut(s) 728, 1062, 1509, 2291
BfmI CTRYAG 3 cut(s) 700, 1379, 1900
BfoI RGCGCY 1 cut(s) 2227
BfuI GTATCC 2 cut(s) 640, 876
BglII AGATCT 2 cut(s) 1747, 2140
BisI GCNGC 7 cut(s) 242, 937, 1379, 1382, 2056, 2171, 2369
BlsI GCNGC 7 cut(s) 243, 938, 1380, 1383, 2057, 2172, 2370
BmcAI AGTACT 1 cut(s) 200
Bme1390I CCNGG 2 cut(s) 1883, 2391
Bme18I GGWCC 1 cut(s) 564
BmeT110I CYCGRG 1 cut(s) 314
BmgT120I GGNCC 3 cut(s) 564, 618, 2409
BmiI GGNNCC 3 cut(s) 278, 565, 2210
BmrFI CCNGG 2 cut(s) 1883, 2391
BmrI ACTGGG 1 cut(s) 2461
BmsI GCATC 8 cut(s) 533, 562, 1055, 1469, 1636, 2000, 2303, 2358
BmtI GCTAGC 1 cut(s) 2294
BmuI ACTGGG 1 cut(s) 2461
BoxI GACNNNNGTC 1 cut(s) 1737
BpiI GAAGAC 2 cut(s) 383, 966
BpmI CTGGAG 1 cut(s) 1259
Bpu14I TTCGAA 1 cut(s) 759
BpuEI CTTGAG 1 cut(s) 1442
Bsa29I ATCGAT 1 cut(s) 597
BsaBI GATNNNNATC 1 cut(s) 2139
BsaJI CCNNGG 2 cut(s) 574, 2476
Bsc4I CCNNNNNNNGG 5 cut(s) 851, 1048, 1865, 2396, 2478
Bse1I ACTGG 7 cut(s) 138, 897, 950, 1242, 1480, 2411, 2456
Bse21I CCTNAGG 1 cut(s) 965
Bse3DI GCAATG 2 cut(s) 548, 650
Bse8I GATNNNNATC 1 cut(s) 2139
BseBI CCWGG 2 cut(s) 1883, 2391
BseCI ATCGAT 1 cut(s) 597
BseDI CCNNGG 2 cut(s) 574, 2476
BseGI GGATG 8 cut(s) 613, 781, 1484, 1651, 1874, 1991, 2349, 2427
BseJI GATNNNNATC 1 cut(s) 2139
BseLI CCNNNNNNNGG 5 cut(s) 851, 1048, 1865, 2396, 2478
BseMI GCAATG 2 cut(s) 548, 650
BseMII CTCAG 4 cut(s) 254, 909, 956, 2082
BseNI ACTGG 7 cut(s) 138, 897, 950, 1242, 1480, 2411, 2456
BseRI GAGGAG 3 cut(s) 837, 1878, 2242
BseXI GCAGC 7 cut(s) 228, 948, 1365, 1393, 2042, 2157, 2355
BsgI GTGCAG 2 cut(s) 955, 1661
Bsh1236I CGCG 2 cut(s) 1818, 2478
Bsh1285I CGRYCG 1 cut(s) 2476
BshFI GGCC 5 cut(s) 620, 855, 896, 1662, 2410
BshNI GGYRCC 1 cut(s) 276
BshVI ATCGAT 1 cut(s) 597
BsiEI CGRYCG 1 cut(s) 2476
BsiHKAI GWGCWC 4 cut(s) 213, 699, 1456, 1912
BsiHKCI CYCGRG 1 cut(s) 314
BslFI GGGAC 1 cut(s) 577
BslI CCNNNNNNNGG 5 cut(s) 851, 1048, 1865, 2396, 2478
BsmAI GTCTC 4 cut(s) 80, 259, 1850, 2442
BsmFI GGGAC 1 cut(s) 577
BsnI GGCC 5 cut(s) 620, 855, 896, 1662, 2410
BsoBI CYCGRG 1 cut(s) 314
Bsp119I TTCGAA 1 cut(s) 759
Bsp1286I GDGCHC 4 cut(s) 213, 699, 1456, 1912
Bsp143I GATC 8 cut(s) 178, 283, 594, 1747, 2121, 2134, 2140, 2317
BspANI GGCC 5 cut(s) 620, 855, 896, 1662, 2410
BspCNI CTCAG 4 cut(s) 255, 910, 957, 2081
BspDI ATCGAT 1 cut(s) 597
BspFNI CGCG 2 cut(s) 1818, 2478
BspLI GGNNCC 3 cut(s) 278, 565, 2210
BspMAI CTGCAG 3 cut(s) 704, 1383, 1904
BspOI GCTAGC 1 cut(s) 2294
BspPI GGATC 3 cut(s) 2129, 2129, 2325
BspQI GCTCTTC 1 cut(s) 1818
BspT104I TTCGAA 1 cut(s) 759
BspT107I GGYRCC 1 cut(s) 276
BsrBI CCGCTC 1 cut(s) 1811
BsrDI GCAATG 2 cut(s) 548, 650
BsrI ACTGG 7 cut(s) 138, 897, 950, 1242, 1480, 2411, 2456
BssECI CCNNGG 2 cut(s) 574, 2476
BssMI GATC 8 cut(s) 178, 283, 594, 1747, 2121, 2134, 2140, 2317
BssSI CACGAG 2 cut(s) 1727, 2195
BssT1I CCWWGG 1 cut(s) 574
Bst2BI CACGAG 2 cut(s) 1727, 2195
Bst2UI CCWGG 2 cut(s) 1883, 2391
Bst4CI ACNGT 7 cut(s) 192, 276, 365, 493, 1193, 1694, 1979
Bst6I CTCTTC 6 cut(s) 608, 1131, 1335, 1818, 1959, 1998
BstAPI GCANNNNNTGC 2 cut(s) 493, 2055
BstBI TTCGAA 1 cut(s) 759
BstC8I GCNNGC 8 cut(s) 110, 329, 941, 1043, 1888, 2060, 2292, 2480
BstDEI CTNAG 7 cut(s) 263, 918, 965, 1448, 1679, 1751, 2068
BstDSI CCRYGG 1 cut(s) 2476
BstENI CCTNNNNNAGG 1 cut(s) 1046
BstF5I GGATG 8 cut(s) 613, 781, 1484, 1651, 1874, 1991, 2349, 2427
BstFNI CGCG 2 cut(s) 1818, 2478
BstH2I RGCGCY 1 cut(s) 2227
BstHHI GCGC 1 cut(s) 2226
BstKTI GATC 8 cut(s) 181, 286, 597, 1750, 2124, 2137, 2143, 2320
BstMAI GTCTC 4 cut(s) 80, 259, 1850, 2442
BstMBI GATC 8 cut(s) 178, 283, 594, 1747, 2121, 2134, 2140, 2317
BstMCI CGRYCG 1 cut(s) 2476
BstMWI GCNNNNNNNGC 2 cut(s) 493, 2055
BstNI CCWGG 2 cut(s) 1883, 2391
BstNSI RCATGY 4 cut(s) 331, 809, 1353, 1890
BstPAI GACNNNNGTC 1 cut(s) 1737
BstSCI CCNGG 2 cut(s) 1881, 2389
BstSFI CTRYAG 3 cut(s) 700, 1379, 1900
BstUI CGCG 2 cut(s) 1818, 2478
BstV1I GCAGC 7 cut(s) 228, 948, 1365, 1393, 2042, 2157, 2355
BstV2I GAAGAC 2 cut(s) 383, 966
BstX2I RGATCY 3 cut(s) 1747, 2134, 2140
BstXI CCANNNNNNTGG 2 cut(s) 1099, 1936
BstYI RGATCY 3 cut(s) 1747, 2134, 2140
Bsu15I ATCGAT 1 cut(s) 597
Bsu36I CCTNAGG 1 cut(s) 965
BsuI GTATCC 2 cut(s) 640, 876
BsuRI GGCC 5 cut(s) 620, 855, 896, 1662, 2410
BsuTUI ATCGAT 1 cut(s) 597
BtgI CCRYGG 1 cut(s) 2476
BtsCI GGATG 8 cut(s) 613, 781, 1484, 1651, 1874, 1991, 2349, 2427
BtsIMutI CAGTG 3 cut(s) 145, 957, 2404
Cac8I GCNNGC 8 cut(s) 110, 329, 941, 1043, 1888, 2060, 2292, 2480
CfoI GCGC 1 cut(s) 2226
Cfr13I GGNCC 3 cut(s) 564, 618, 2409
Cfr42I CCGCGG 1 cut(s) 2479
ClaI ATCGAT 1 cut(s) 597
CseI GACGC 2 cut(s) 811, 1373
CsiI ACCWGGT 1 cut(s) 2389
Csp6I GTAC 3 cut(s) 199, 277, 1583
CviAII CATG 8 cut(s) 14, 328, 394, 806, 1099, 1350, 1887, 1936
CviQI GTAC 3 cut(s) 199, 277, 1583
DdeI CTNAG 7 cut(s) 263, 918, 965, 1448, 1679, 1751, 2068
DpnI GATC 8 cut(s) 180, 285, 596, 1749, 2123, 2136, 2142, 2319
DpnII GATC 8 cut(s) 178, 283, 594, 1747, 2121, 2134, 2140, 2317
EaeI YGGCCR 2 cut(s) 853, 894
Eam1104I CTCTTC 6 cut(s) 608, 1131, 1335, 1818, 1959, 1998
EarI CTCTTC 6 cut(s) 608, 1131, 1335, 1818, 1959, 1998
Eco130I CCWWGG 1 cut(s) 574
Eco47I GGWCC 1 cut(s) 564
Eco57I CTGAAG 3 cut(s) 117, 1940, 2240
Eco81I CCTNAGG 1 cut(s) 965
Eco88I CYCGRG 1 cut(s) 314
EcoNI CCTNNNNNAGG 1 cut(s) 1046
EcoRII CCWGG 2 cut(s) 1881, 2389
EcoT14I CCWWGG 1 cut(s) 574
EcoT22I ATGCAT 1 cut(s) 329
ErhI CCWWGG 1 cut(s) 574
FaeI CATG 8 cut(s) 17, 331, 397, 809, 1102, 1353, 1890, 1939
FaqI GGGAC 1 cut(s) 577
FatI CATG 8 cut(s) 13, 327, 393, 805, 1098, 1349, 1886, 1935
FauI CCCGC 2 cut(s) 198, 2471
Fnu4HI GCNGC 7 cut(s) 242, 937, 1379, 1382, 2056, 2171, 2369
FokI GGATG 8 cut(s) 620, 768, 1491, 1658, 1861, 1978, 2336, 2414
Fsp4HI GCNGC 7 cut(s) 242, 937, 1379, 1382, 2056, 2171, 2369
FspBI CTAG 4 cut(s) 728, 1062, 1509, 2291
GlaI GCGC 1 cut(s) 2225
GluI GCNGC 7 cut(s) 242, 937, 1379, 1382, 2056, 2171, 2369
GsuI CTGGAG 1 cut(s) 1259
HaeII RGCGCY 1 cut(s) 2227
HaeIII GGCC 5 cut(s) 620, 855, 896, 1662, 2410
HgaI GACGC 2 cut(s) 811, 1373
HhaI GCGC 1 cut(s) 2226
Hin1II CATG 8 cut(s) 17, 331, 397, 809, 1102, 1353, 1890, 1939
Hin6I GCGC 1 cut(s) 2224
HinP1I GCGC 1 cut(s) 2224
HincII GTYRAC 3 cut(s) 477, 1182, 1347
HindII GTYRAC 3 cut(s) 477, 1182, 1347
HindIII AAGCTT 2 cut(s) 722, 1310
HphI GGTGA 3 cut(s) 727, 2075, 2092
Hpy166II GTNNAC 6 cut(s) 477, 1182, 1210, 1347, 1517, 1697
Hpy8I GTNNAC 6 cut(s) 477, 1182, 1210, 1347, 1517, 1697
Hpy99I CGWCG 2 cut(s) 1389, 1668
HpyAV CCTTC 9 cut(s) 226, 396, 450, 632, 676, 795, 985, 1864, 2199
HpyCH4III ACNGT 7 cut(s) 192, 276, 365, 493, 1193, 1694, 1979
HpyCH4IV ACGT 3 cut(s) 347, 415, 2436
HpyF10VI GCNNNNNNNGC 2 cut(s) 493, 2055
HpyF3I CTNAG 7 cut(s) 263, 918, 965, 1448, 1679, 1751, 2068
HpySE526I ACGT 3 cut(s) 347, 415, 2436
Hsp92II CATG 8 cut(s) 17, 331, 397, 809, 1102, 1353, 1890, 1939
HspAI GCGC 1 cut(s) 2224
KpnI GGTACC 1 cut(s) 280
KspI CCGCGG 1 cut(s) 2479
Kzo9I GATC 8 cut(s) 178, 283, 594, 1747, 2121, 2134, 2140, 2317
LguI GCTCTTC 1 cut(s) 1818
LmnI GCTCC 2 cut(s) 238, 2178
Lsp1109I GCAGC 7 cut(s) 228, 948, 1365, 1393, 2042, 2157, 2355
LweI GCATC 8 cut(s) 533, 562, 1055, 1469, 1636, 2000, 2303, 2358
MabI ACCWGGT 1 cut(s) 2389
MaeI CTAG 4 cut(s) 728, 1062, 1509, 2291
MaeII ACGT 3 cut(s) 347, 415, 2436
MaeIII GTNAC 2 cut(s) 1233, 1688
MalI GATC 8 cut(s) 180, 285, 596, 1749, 2123, 2136, 2142, 2319
MbiI CCGCTC 1 cut(s) 1811
MboI GATC 8 cut(s) 178, 283, 594, 1747, 2121, 2134, 2140, 2317
MfeI CAATTG 3 cut(s) 656, 1152, 1913
MflI RGATCY 3 cut(s) 1747, 2134, 2140
MhlI GDGCHC 4 cut(s) 213, 699, 1456, 1912
MlsI TGGCCA 2 cut(s) 855, 896
MluNI TGGCCA 2 cut(s) 855, 896
MlyI GAGTC 9 cut(s) 28, 326, 472, 695, 1269, 1415, 1553, 1715, 2091
MmeI TCCRAC 3 cut(s) 669, 1367, 1902
Mox20I TGGCCA 2 cut(s) 855, 896
Mph1103I ATGCAT 1 cut(s) 329
MroXI GAANNNNTTC 1 cut(s) 1023
MscI TGGCCA 2 cut(s) 855, 896
MseI TTAA 8 cut(s) 299, 350, 498, 903, 1224, 2028, 2109, 2268
MslI CAYNNNNRTG 2 cut(s) 558, 1354
Msp20I TGGCCA 2 cut(s) 855, 896
MspA1I CMGCKG 2 cut(s) 2368, 2478
MspR9I CCNGG 2 cut(s) 1883, 2391
MunI CAATTG 3 cut(s) 656, 1152, 1913
MvaI CCWGG 2 cut(s) 1883, 2391
MvnI CGCG 2 cut(s) 1818, 2478
MwoI GCNNNNNNNGC 2 cut(s) 493, 2055
NdeII GATC 8 cut(s) 178, 283, 594, 1747, 2121, 2134, 2140, 2317
NheI GCTAGC 1 cut(s) 2290
NlaIII CATG 8 cut(s) 17, 331, 397, 809, 1102, 1353, 1890, 1939
NlaIV GGNNCC 3 cut(s) 278, 565, 2210
NmuCI GTSAC 1 cut(s) 1688
NsiI ATGCAT 1 cut(s) 329
NspI RCATGY 4 cut(s) 331, 809, 1353, 1890
NspV TTCGAA 1 cut(s) 759
PaeI GCATGC 2 cut(s) 331, 1890
PciI ACATGT 1 cut(s) 1349
PciSI GCTCTTC 1 cut(s) 1818
PdmI GAANNNNTTC 1 cut(s) 1023
PfeI GAWTC 4 cut(s) 248, 837, 1103, 2261
PkrI GCNGC 7 cut(s) 243, 938, 1380, 1383, 2057, 2172, 2370
PleI GAGTC 9 cut(s) 28, 325, 472, 694, 1269, 1415, 1552, 1714, 2091
PpsI GAGTC 9 cut(s) 28, 325, 472, 694, 1269, 1415, 1552, 1714, 2091
PscI ACATGT 1 cut(s) 1349
PshAI GACNNNNGTC 1 cut(s) 1737
PshBI ATTAAT 2 cut(s) 299, 2028
PsiI TTATAA 1 cut(s) 1164
Psp6I CCWGG 2 cut(s) 1881, 2389
PspGI CCWGG 2 cut(s) 1881, 2389
PspN4I GGNNCC 3 cut(s) 278, 565, 2210
PspPI GGNCC 3 cut(s) 564, 618, 2409
PstI CTGCAG 3 cut(s) 704, 1383, 1904
PsuI RGATCY 3 cut(s) 1747, 2134, 2140
RsaI GTAC 3 cut(s) 200, 278, 1584
RsaNI GTAC 3 cut(s) 199, 277, 1583
RseI CAYNNNNRTG 2 cut(s) 558, 1354
SacII CCGCGG 1 cut(s) 2479
SapI GCTCTTC 1 cut(s) 1818
SaqAI TTAA 8 cut(s) 299, 350, 498, 903, 1224, 2028, 2109, 2268
SatI GCNGC 7 cut(s) 242, 937, 1379, 1382, 2056, 2171, 2369
Sau3AI GATC 8 cut(s) 178, 283, 594, 1747, 2121, 2134, 2140, 2317
Sau96I GGNCC 3 cut(s) 564, 618, 2409
ScaI AGTACT 1 cut(s) 200
SchI GAGTC 9 cut(s) 28, 326, 472, 695, 1269, 1415, 1553, 1715, 2091
ScrFI CCNGG 2 cut(s) 1883, 2391
SduI GDGCHC 4 cut(s) 213, 699, 1456, 1912
SexAI ACCWGGT 1 cut(s) 2389
SfaNI GCATC 8 cut(s) 533, 562, 1055, 1469, 1636, 2000, 2303, 2358
SfcI CTRYAG 3 cut(s) 700, 1379, 1900
Sfr303I CCGCGG 1 cut(s) 2479
SfuI TTCGAA 1 cut(s) 759
SgrBI CCGCGG 1 cut(s) 2479
SinI GGWCC 1 cut(s) 564
SmiMI CAYNNNNRTG 2 cut(s) 558, 1354
SmlI CTYRAG 1 cut(s) 1457
SmoI CTYRAG 1 cut(s) 1457
SphI GCATGC 2 cut(s) 331, 1890
SspI AATATT 2 cut(s) 354, 1399
SspMI CTAG 4 cut(s) 728, 1062, 1509, 2291
StyD4I CCNGG 2 cut(s) 1881, 2389
StyI CCWWGG 1 cut(s) 574
TaaI ACNGT 7 cut(s) 192, 276, 365, 493, 1193, 1694, 1979
TaiI ACGT 3 cut(s) 350, 418, 2439
TaqI TCGA 7 cut(s) 66, 597, 759, 835, 972, 1027, 1278
TatI WGTACW 1 cut(s) 198
TfiI GAWTC 4 cut(s) 248, 837, 1103, 2261
Tru1I TTAA 8 cut(s) 299, 350, 498, 903, 1224, 2028, 2109, 2268
Tru9I TTAA 8 cut(s) 299, 350, 498, 903, 1224, 2028, 2109, 2268
TscAI CASTG 3 cut(s) 145, 957, 2411
TseFI GTSAC 1 cut(s) 1688
TseI GCWGC 7 cut(s) 241, 936, 1378, 1381, 2055, 2170, 2368
Tsp45I GTSAC 1 cut(s) 1688
TspDTI ATGAA 7 cut(s) 432, 644, 777, 1032, 1095, 1143, 1282
TspGWI ACGGA 3 cut(s) 241, 251, 2342
TspRI CASTG 3 cut(s) 145, 957, 2411
VpaK11BI GGWCC 1 cut(s) 564
VspI ATTAAT 2 cut(s) 299, 2028
XagI CCTNNNNNAGG 1 cut(s) 1046
XapI RAATTY 3 cut(s) 761, 1023, 1624
XbaI TCTAGA 2 cut(s) 727, 1061
XceI RCATGY 4 cut(s) 331, 809, 1353, 1890
XmnI GAANNNNTTC 1 cut(s) 1023
XspI CTAG 4 cut(s) 728, 1062, 1509, 2291
ZrmI AGTACT 1 cut(s) 200
Zsp2I ATGCAT 1 cut(s) 329
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.