MD11G1031600.v1.1

disease resistance

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr11
Physical Location & Seq
Forward (+)
2758670 .. 2761582
2913 bp
Loading structure...
UTR
Exon/CDS
Intron
MD11G1031600.v1.1.491

Sequence Viewer

Length: 2556 bp
ATGGCACTGGGAGAGGGTTTTCTTGCGGCGTTTCTAAAGGTGCTGCTCAACAGGTTGACCTCCCGCGAGATTCTCAACTACATTGGAAACTTCCGGGGCGTCAGAAAGAAGCTGGACAAGTGGAGGGCCGTGTTAACTGCAATAGGAGCGGTGCTCAGCGATGCCGAGGAAAAACAACTCACTGAGGATGCTGTGAAACTGTGGCTCGATGATCTCAGAGACTTGGCTTATGATGTCGAAGACATGTTGGACAAATTTGACACCCAAATGTTGAAGCGCATGATAGAGGGACGTGATCAAGCCCGCACAAGCAACAAGGTGCGGACCTCACTTTTCAAAATTAAATTCAATAGGGATATGAACTCCGAAATGAAGAAGATTACGGAGCGGTTGCAAGACATATCTGAACGGAAAGAGAAGTTTGGCTTGAAAGATACTGGGACGTCTGCTAAGGAATCGCGAAGTCTACCAAGTTCAGATGTGTTAGATGAAAAGCTAGTTGTTGGAAGGGATGGTGACAAAGGGGAGATTATTGAATTGTTGTCAAGAAAATACGAGCATGAAGGTGCTGTCAATTTTGGTGTAGTTGCTATAGTTGGCATGCCCGGAGTTGGGAAGATGACACTTGCTCAACTTGTATTCAACCACAAAGATGATGCCATGAAGGAGTTTGAGCCTAAGGTGTGGGTATCTGTGTCTGATGACTTCAATGTGGTGCGAGTGACAAAGGCAATTCTTGAATCCATCACATCCCGACCCGTTCAAATGGAGGAGTTTAGTAAAATTCAGCATGATTTGTGTGAGCAATTAAGAGGAAAAAAGTTTTTAATCGTGTTAGATGATATCTGGAACAAAGGCGACTATGATCTACACGATCTCTGGACAAGACTTAAATCCCCTTTTGGCGTCGGAGCAGGAGGAAGTAAGATTATTGTGACAACCCGTGATGTGCATGTTGCAAGGACTATGGGAGCCACGGGAGTTCATAATTTGGAATGTATGGCAGATGATGATTGTTTGGAAATATTTGAGCGACATGCATTTGGGGAAGTTAATAGTGTAAAACCAGTAAATTATGAGTTGATTCGGACAAAAATTGTTGAAAAATGTTGTGGCTTACCATTAGCTGCGAGGACTCTCGGTGGTCTCTTACTTTGCAAAGAAAAAGATGAGTGGGGAGAAATATTGGACAACAAACTATGGAATCTTGCAGATAACAGTAGCCTTCTCCCCGTACTAAAGTTGAGCTATCACTATCTTCCATCACATTTGAAGAGGTGTTTTGCCTACTGCTCAATACTTCCAAATGACTACGAATTTTGGGAGAAGCGGCTCGTCCTTTTGTGGATGGCAGAGGGTTTGATTCAACAAAAACCTGATGACAATAAACAAATGGAGGATTTGGGCCGCGACTACTTTCGAGAGCTATTAGCAAGGTCGCTGTTTCAAGAATCAAGCAAAACCAATTCAAGATATGTAATGCATGACCTCGTTAATGATTTAGCACATTGGGCAGCAGGAGAAATATGTTTTAGGTTGGAAGATAAGCAAGGTGATAACTTGCAAAGCACTTGCTTTCAAAGGGCTCGCCATTCGTCTTTCATTGCTGGTGAATTTGATGGAGTTACGAGATTTGAGGACTTCCCAAAAGCTGAACGCTTGCGAACATTCCTGCCACTTTCACTTTCAGATTCTGGTGGATGGTACAAATGTTTGTCTCGTAAGGTTACTTTTGAGCTATTACCACAGTTGCAATACTTACGAGTGCTCTCGTTCAATTGCTACACAATAACTGAGCTGCCAAAGTCAATCGGTGATTTGAGGTTGTTACAGTATCTTGACCTTTCCTACACAGATATAACCTGTTTGCCTAAGTCAACAAGCACTCTTTACCACTTGCAAACATTGATATTGGAAGGTTGTTCTAAATTGAAGTCATTGCCCACAAACATGAGTAATCTAATTAATTTGCGCCATCTCAACAACTCAGGTGCATATTCGTTGGAAGGAATGCCTTGGCAACTAGGTCGATTGACGAATCTACAATCATTGCCTCTTTTTGTGGTGAGCAAAGGTAGTGATCAATCAGGGATAAGAGAGATAGGGCCCCTATTGCATCTTCGAGGGACACTGTGCCTCTCAAGATTGGAGAATGTGACTGATGTCAAGGATGCCAGGAGGGCCAACTTGAAATGCAAGGAGAGGCTTGATTCGTTGGTCCTAAAATGGTCTCATTCAAGCGACACGAGAGAAACGGAATCCGTTGTGCTTGACATGTTAGAGCCTCATACAAAGCTCAAGGAGCTCACCATCAAGAGTTATGCCGTAGAGGAATTTTCATCATGGGTTGGAGGTCATTTGTTCTCTAATATGGTGCTTGTGCGGTTAGAGGAATGTAACAATTGTTTATCGGTGCCACCTCTCGGACAATTGCCTCATCTCAAAGAACTTTATATTAGAGGAATGAATGCAGTGGAAAGTGTTGGTGCTGAGTTTTATGGCGAGTGTATCTTGCCTTTTCCGCTGTTAGAGATTCTTGAGTTTGTGGATATGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

852

Amino Acids

96.99

Weight (kDa)

6.1

Isoelectric Point (pI)

40.99

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Rx_N PF18052 11 - 99 3.3e-21 Rx N-terminal domain
NB-ARC PF00931 174 - 348 1.8e-36 NB-ARC domain
WHD_DRP PF23559 433 - 502 7.6e-24 Disease resistance protein Winged helix domain
LRR_14 PF23598 580 - 828 4.1e-20 Leucine-rich repeat region
LRR_R13L1-DRL21 PF25019 698 - 822 8.7e-35 R13L1/DRL21 LRRs
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0000070)

Species Orthologous Gene IDs
fragaria_vesca FvH4_7g00360 FvH4_7g00850 FvH4_7g02400 FvH4_7g02430 FvH4_7g02450 FvH4_7g25671 FvH4_7g25680 FvH4_7g25683 FvH4_7g26980 FvH4_7g27330 FvH4_7g27355 FvH4_7g27610 FvH4_7g27642 FvH4_7g27890 FvH4_7g27891 FvH4_7g27891 FvH4_7g27891 FvH4_7g28110 FvH4_7g28390
malus_domestica MD00G1070800.v1.1 MD00G1168000.v1.1 MD00G1168300.v1.1 MD00G1168700.v1.1 MD02G1293100.v1.1 MD02G1293200.v1.1 MD02G1314300.v1.1 MD03G1009000.v1.1 MD03G1009400.v1.1 MD03G1042300.v1.1 MD03G1042400.v1.1 MD07G1033600.v1.1 MD07G1033700.v1.1 MD07G1033900.v1.1 MD11G1011400.v1.1 MD11G1011700.v1.1 MD11G1029800.v1.1 MD11G1029900.v1.1 MD11G1030300.v1.1 MD11G1030400.v1.1 MD11G1030500.v1.1 MD11G1031300.v1.1 MD11G1031600.v1.1 MD11G1032000.v1.1 MD11G1033200.v1.1 MD11G1033600.v1.1 MD11G1033800.v1.1 MD11G1033900.v1.1 MD11G1034100.v1.1 MD11G1034400.v1.1 MD11G1040600.v1.1 MD11G1041100.v1.1 MD11G1043100.v1.1 MD11G1043500.v1.1 MD11G1044500.v1.1 MD11G1045100.v1.1 MD11G1045600.v1.1
prunus_persica Prupe.2G022400_v2.0.a1 Prupe.2G022400_v2.0.a1 Prupe.2G022400_v2.0.a1 Prupe.2G022500_v2.0.a1 Prupe.2G022500_v2.0.a1 Prupe.2G022900_v2.0.a1 Prupe.2G023500_v2.0.a1 Prupe.2G023500_v2.0.a1 Prupe.2G023500_v2.0.a1 Prupe.2G023500_v2.0.a1 Prupe.2G023500_v2.0.a1 Prupe.2G023500_v2.0.a1 Prupe.2G023600_v2.0.a1 Prupe.2G028000_v2.0.a1 Prupe.2G030200_v2.0.a1 Prupe.2G067600_v2.0.a1 Prupe.8G117900_v2.0.a1
pyrus_communis pycom02g26350 pycom03g03270 pycom07g02370 pycom11g00750 pycom11g00790 pycom11g02340 pycom11g02370 pycom11g02380 pycom11g02390 pycom11g02410 pycom11g02460 pycom11g02470 pycom11g02500 pycom11g02510 pycom11g02520 pycom11g02530 pycom11g02580 pycom11g02590 pycom11g02680 pycom11g02710 pycom11g02720 pycom11g02730 pycom11g02750 pycom11g02760 pycom11g02770 pycom11g03690 pycom13g25120 pycom13g25130 pycom13g25140 pycom13g25170 pycom13g25180 pycom13g25190 pycom13g25210
rosa_chinensis RchiOBHm_Chr1g0315001 RchiOBHm_Chr1g0315411 RchiOBHm_Chr1g0317951 RchiOBHm_Chr1g0319741 RchiOBHm_Chr1g0319841 RchiOBHm_Chr1g0319911 RchiOBHm_Chr1g0319991 RchiOBHm_Chr1g0320001 RchiOBHm_Chr1g0320021 RchiOBHm_Chr1g0320081 RchiOBHm_Chr1g0320111 RchiOBHm_Chr1g0320131 RchiOBHm_Chr1g0320161 RchiOBHm_Chr1g0320171 RchiOBHm_Chr1g0320241 RchiOBHm_Chr1g0320281 RchiOBHm_Chr1g0320411 RchiOBHm_Chr1g0320461 RchiOBHm_Chr1g0320551 RchiOBHm_Chr1g0320581 RchiOBHm_Chr1g0320661 RchiOBHm_Chr1g0320891 RchiOBHm_Chr1g0320971 RchiOBHm_Chr1g0321021 RchiOBHm_Chr1g0321031 RchiOBHm_Chr1g0321091 RchiOBHm_Chr1g0321351 RchiOBHm_Chr1g0321481 RchiOBHm_Chr1g0321491 RchiOBHm_Chr1g0327521 RchiOBHm_Chr1g0328061 RchiOBHm_Chr1g0334991 RchiOBHm_Chr1g0373781 RchiOBHm_Chr1g0373891 RchiOBHm_Chr1g0374841 RchiOBHm_Chr2g0131111 RchiOBHm_Chr2g0131121 RchiOBHm_Chr4g0408901 RchiOBHm_Chr5g0041691 RchiOBHm_Chr7g0237021
rosa_laevigata RLG00000019168 RLG00000030456 RLG00000030460 RLG00000030571
rosa_multiflora Rmu_co7963468.1_g000001 Rmu_co7991248.1_g000001 Rmu_co8195256.1_g000001 Rmu_co8312199.1_g000001 Rmu_co8349215.1_g000001 Rmu_co8351041.1_g000001 Rmu_co8422719.1_g000001 Rmu_co8450711.1_g000001 Rmu_co8465555.1_g000001 Rmu_co8489965.1_g000001 Rmu_sc0000087.1_g000014 Rmu_sc0000272.1_g000015 Rmu_sc0000724.1_g000006 Rmu_sc0000724.1_g000021 Rmu_sc0000724.1_g000022 Rmu_sc0000861.1_g000024 Rmu_sc0001049.1_g000006 Rmu_sc0001049.1_g000007 Rmu_sc0001512.1_g000001 Rmu_sc0002022.1_g000004 Rmu_sc0002063.1_g000011 Rmu_sc0002131.1_g000024 Rmu_sc0002337.1_g000012 Rmu_sc0002341.1_g000005 Rmu_sc0002539.1_g000117 Rmu_sc0002745.1_g000005 Rmu_sc0002745.1_g000006 Rmu_sc0003145.1_g000002 Rmu_sc0003199.1_g000007 Rmu_sc0003270.1_g000039 Rmu_sc0003270.1_g000040 Rmu_sc0003423.1_g000001 Rmu_sc0003423.1_g000002 Rmu_sc0003629.1_g000067 Rmu_sc0004039.1_g000002 Rmu_sc0004555.1_g000001 Rmu_sc0004555.1_g000005 Rmu_sc0004555.1_g000006 Rmu_sc0004947.1_g000025 Rmu_sc0004947.1_g000026 Rmu_sc0005255.1_g000025 Rmu_sc0007977.1_g000016 Rmu_sc0008752.1_g000005 Rmu_sc0009236.1_g000004 Rmu_sc0009236.1_g000008 Rmu_sc0009236.1_g000009 Rmu_sc0009236.1_g000010 Rmu_sc0011424.1_g000036 Rmu_sc0013413.1_g000001 Rmu_sc0013735.1_g000002 Rmu_sc0015304.1_g000002 Rmu_sc0015304.1_g000003 Rmu_sc0015585.1_g000001 Rmu_sc0018410.1_g000001 Rmu_sc0022723.1_g000001 Rmu_sc0022723.1_g000002 Rmu_sc0022724.1_g000001 Rmu_sc0023430.1_g000001 Rmu_sc0026053.1_g000001 Rmu_sc0026429.1_g000002 Rmu_sc0026647.1_g000001 Rmu_sc0031359.1_g000001 Rmu_ssc0000042.1_g000040 Rmu_ssc0000081.1_g000001 Rmu_ssc0000300.1_g000011
rosa_roxburghii Rroxscaffold_160G00433620 Rroxscaffold_160G00433990 Rroxscaffold_1G00038820 Rroxscaffold_2G00113190 Rroxscaffold_4G00283240 Rroxscaffold_4G00283930 Rroxscaffold_4G00284010 Rroxscaffold_4G00322600 Rroxscaffold_4G00327710 Rroxscaffold_4G00328100 Rroxscaffold_4G00328130 Rroxscaffold_4G00331590 Rroxscaffold_5G00353280
rosa_rugosa Rorug01G0004200 Rorug01G0018800 Rorug01G0018900 Rorug01G0029900 Rorug01G0030000 Rorug01G0030000 Rorug01G0030000 Rorug01G0030200 Rorug01G0030300 Rorug01G0030800 Rorug01G0032400 Rorug01G0032900 Rorug01G0055800 Rorug01G0067600 Rorug01G0067700 Rorug01G0067800 Rorug01G0067900 Rorug01G0068000 Rorug01G0379500 Rorug01G0379600 Rorug01G0379600 Rorug01G0385200 Rorug01G0385300 Rorug02G0295100 Rorug04G0088500 Rorug04G0088600 Rorug05G0194900 Rorug07G0301400
rosa_samantha Rh1AG014800 Rh1AG015200 Rh1AG030500 Rh1AG041800 Rh1AG042300 Rh1AG042700 Rh1AG042800 Rh1AG042900 Rh1AG045000 Rh1AG085100 Rh1AG085200 Rh1AG388600 Rh1AG396700 Rh1AG396900 Rh1BG007300 Rh1BG039200 Rh1BG039600 Rh1BG042800 Rh1BG067300 Rh1BG109700 Rh1BG109900 Rh1BG354000 Rh1CG043800 Rh1CG044400 Rh1DG008600 Rh1DG022900 Rh1DG023400 Rh1DG023600 Rh1DG023900 Rh1DG024100 Rh1DG024400 Rh1DG024500 Rh1DG025500 Rh1DG025700 Rh1DG026500 Rh1DG026800 Rh1DG038900 Rh1DG048800 Rh1DG049300 Rh1DG051700 Rh1DG052000 Rh1DG146200 Rh1DG383500 Rh2BG354900 Rh2CG333600 Rh4BG149600 Rh4BG149700 Rh4CG160600
rosa_wichuraiana Rw0G001100 Rw0G001130 Rw0G001180 Rw0G012580 Rw1G003480 Rw1G003540 Rw1G003600 Rw1G003640 Rw1G003670 Rw1G003750 Rw1G003940 Rw1G006650 Rw1G034550 Rw1G034560 Rw1G034650 Rw1G034660 Rw1G035170 Rw1G035190 Rw1G037060 Rw2G028210 Rw4G012540 Rw5G026370 Rw7G037900

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 446
AccB1I GGYRCC 1 cut(s) 2413
AccBSI CCGCTC 2 cut(s) 149, 388
AccI GTMKAC 1 cut(s) 466
AccII CGCG 3 cut(s) 66, 460, 1410
AcsI RAATTY 6 cut(s) 254, 344, 783, 1316, 1613, 2333
AcyI GRCGYC 3 cut(s) 99, 443, 906
AfaI GTAC 2 cut(s) 1236, 1706
AfiI CCNNNNNNNGG 3 cut(s) 611, 612, 2423
AflIII ACRYGT 2 cut(s) 243, 2274
AjiI CACGTC 1 cut(s) 293
AjnI CCWGG 1 cut(s) 2174
Alw21I GWGCWC 3 cut(s) 156, 1770, 2307
Alw26I GTCTC 4 cut(s) 213, 1151, 1722, 2235
AlwNI CAGNNNCTG 1 cut(s) 1694
AoxI GGCC 4 cut(s) 126, 1405, 2105, 2181
ApaI GGGCCC 1 cut(s) 2109
ApeKI GCWGC 4 cut(s) 43, 1127, 1514, 1798
ApoI RAATTY 6 cut(s) 254, 344, 783, 1316, 1613, 2333
AseI ATTAAT 1 cut(s) 1965
AspLEI GCGC 2 cut(s) 279, 1974
AspS9I GGNCC 7 cut(s) 126, 324, 1405, 2105, 2106, 2181, 2218
AsuC2I CCSGG 2 cut(s) 95, 606
AsuHPI GGTGA 6 cut(s) 527, 1565, 1622, 1826, 2077, 2299
AvaII GGWCC 2 cut(s) 324, 2218
AxyI CCTNAGG 1 cut(s) 678
BaeGI GKGCMC 1 cut(s) 2109
BaeI ACNNNNGTAYC 2 cut(s) 1696, 1729
BanI GGYRCC 1 cut(s) 2413
BanII GRGCYC 3 cut(s) 1588, 2109, 2307
BauI CACGAG 1 cut(s) 2245
BbsI GAAGAC 1 cut(s) 246
Bbv12I GWGCWC 3 cut(s) 156, 1770, 2307
BbvI GCAGC 4 cut(s) 30, 1114, 1526, 1785
BccI CCATC 8 cut(s) 506, 752, 1270, 1342, 1613, 1695, 1983, 2318
BceAI ACGGC 2 cut(s) 113, 2309
BcgI CGANNNNNNTGC 2 cut(s) 2009, 2043
BciT130I CCWGG 1 cut(s) 2176
BclI TGATCA 2 cut(s) 295, 2080
BcnI CCSGG 2 cut(s) 95, 606
BcoDI GTCTC 4 cut(s) 213, 1151, 1722, 2235
BfaI CTAG 2 cut(s) 497, 2024
BfmI CTRYAG 1 cut(s) 591
BglI GCCNNNNNGGC 1 cut(s) 2180
BisI GCNGC 7 cut(s) 27, 44, 1128, 1331, 1408, 1515, 1799
BlpI GCTNAGC 1 cut(s) 155
BlsI GCNGC 7 cut(s) 28, 45, 1129, 1332, 1409, 1516, 1800
Bme1390I CCNGG 3 cut(s) 95, 606, 2176
Bme18I GGWCC 2 cut(s) 324, 2218
BmgBI CACGTC 1 cut(s) 293
BmgT120I GGNCC 7 cut(s) 126, 324, 1405, 2105, 2106, 2181, 2218
BmiI GGNNCC 4 cut(s) 973, 2107, 2108, 2415
BmrFI CCNGG 3 cut(s) 95, 606, 2176
BmrI ACTGGG 2 cut(s) 17, 447
BmsI GCATC 5 cut(s) 151, 178, 646, 2125, 2161
BmuI ACTGGG 2 cut(s) 17, 447
BoxI GACNNNNGTC 1 cut(s) 2162
BpiI GAAGAC 1 cut(s) 246
BplI GAGNNNNNCTC 2 cut(s) 138, 170
Bpu10I CCTNAGC 1 cut(s) 450
Bpu1102I GCTNAGC 1 cut(s) 155
BpuEI CTTGAG 2 cut(s) 2125, 2282
BpuMI CCSGG 2 cut(s) 95, 606
BsaHI GRCGYC 3 cut(s) 99, 443, 906
BsaI GGTCTC 2 cut(s) 1151, 2235
BsaJI CCNNGG 4 cut(s) 94, 165, 975, 2015
Bsc4I CCNNNNNNNGG 3 cut(s) 611, 612, 2423
Bse1I ACTGG 3 cut(s) 12, 442, 1067
Bse21I CCTNAGG 1 cut(s) 678
Bse3DI GCAATG 3 cut(s) 1602, 1937, 2048
BseBI CCWGG 1 cut(s) 2176
BseDI CCNNGG 4 cut(s) 94, 165, 975, 2015
BseGI GGATG 6 cut(s) 193, 517, 749, 1353, 1706, 2176
BseLI CCNNNNNNNGG 3 cut(s) 611, 612, 2423
BseMI GCAATG 3 cut(s) 1602, 1937, 2048
BseMII CTCAG 6 cut(s) 169, 174, 229, 1785, 2001, 2481
BseNI ACTGG 3 cut(s) 12, 442, 1067
BseRI GAGGAG 1 cut(s) 785
BseSI GKGCMC 1 cut(s) 2109
BseXI GCAGC 4 cut(s) 30, 1114, 1526, 1785
Bsh1236I CGCG 3 cut(s) 66, 460, 1410
BshFI GGCC 4 cut(s) 128, 1407, 2107, 2183
BshNI GGYRCC 1 cut(s) 2413
BsiHKAI GWGCWC 3 cut(s) 156, 1770, 2307
BsiSI CCGG 2 cut(s) 94, 606
BslFI GGGAC 3 cut(s) 303, 454, 2140
BslI CCNNNNNNNGG 3 cut(s) 611, 612, 2423
BsmAI GTCTC 4 cut(s) 213, 1151, 1722, 2235
BsmFI GGGAC 3 cut(s) 303, 454, 2140
BsmI GAATGC 2 cut(s) 2016, 2473
BsnI GGCC 4 cut(s) 128, 1407, 2107, 2183
Bso31I GGTCTC 2 cut(s) 1151, 2235
Bsp120I GGGCCC 1 cut(s) 2105
Bsp1286I GDGCHC 5 cut(s) 156, 1588, 1770, 2109, 2307
Bsp143I GATC 5 cut(s) 211, 295, 865, 874, 2080
Bsp1720I GCTNAGC 1 cut(s) 155
Bsp68I TCGCGA 1 cut(s) 460
BspANI GGCC 4 cut(s) 128, 1407, 2107, 2183
BspCNI CTCAG 6 cut(s) 168, 175, 228, 1786, 2000, 2482
BspFNI CGCG 3 cut(s) 66, 460, 1410
BspLI GGNNCC 4 cut(s) 973, 2107, 2108, 2415
BspT107I GGYRCC 1 cut(s) 2413
BspTNI GGTCTC 2 cut(s) 1151, 2235
BsrBI CCGCTC 2 cut(s) 149, 388
BsrDI GCAATG 3 cut(s) 1602, 1937, 2048
BsrI ACTGG 3 cut(s) 12, 442, 1067
BssECI CCNNGG 4 cut(s) 94, 165, 975, 2015
BssMI GATC 5 cut(s) 211, 295, 865, 874, 2080
BssNI GRCGYC 3 cut(s) 99, 443, 906
BssSI CACGAG 1 cut(s) 2245
BssT1I CCWWGG 1 cut(s) 2015
Bst2BI CACGAG 1 cut(s) 2245
Bst2UI CCWGG 1 cut(s) 2176
Bst4CI ACNGT 5 cut(s) 201, 1220, 1749, 1833, 2133
Bst6I CTCTTC 1 cut(s) 1268
BstACI GRCGYC 3 cut(s) 99, 443, 906
BstC8I GCNNGC 4 cut(s) 304, 602, 1588, 1661
BstDEI CTNAG 9 cut(s) 155, 183, 215, 450, 678, 1794, 1872, 1987, 2490
BstDSI CCRYGG 1 cut(s) 975
BstF5I GGATG 6 cut(s) 193, 517, 749, 1353, 1706, 2176
BstFNI CGCG 3 cut(s) 66, 460, 1410
BstHHI GCGC 2 cut(s) 279, 1974
BstKTI GATC 5 cut(s) 214, 298, 868, 877, 2083
BstMAI GTCTC 4 cut(s) 213, 1151, 1722, 2235
BstMBI GATC 5 cut(s) 211, 295, 865, 874, 2080
BstMWI GCNNNNNNNGC 6 cut(s) 146, 1511, 2113, 2180, 2302, 2521
BstNI CCWGG 1 cut(s) 2176
BstNSI RCATGY 5 cut(s) 247, 604, 956, 1040, 2278
BstPAI GACNNNNGTC 1 cut(s) 2162
BstSCI CCNGG 3 cut(s) 93, 604, 2174
BstSFI CTRYAG 1 cut(s) 591
BstSLI GKGCMC 1 cut(s) 2109
BstUI CGCG 3 cut(s) 66, 460, 1410
BstV1I GCAGC 4 cut(s) 30, 1114, 1526, 1785
BstV2I GAAGAC 1 cut(s) 246
Bsu36I CCTNAGG 1 cut(s) 678
BsuRI GGCC 4 cut(s) 128, 1407, 2107, 2183
BtgI CCRYGG 1 cut(s) 975
BtgZI GCGATG 1 cut(s) 174
BtrI CACGTC 1 cut(s) 293
BtsCI GGATG 6 cut(s) 193, 517, 749, 1353, 1706, 2176
BtsI GCAGTG 1 cut(s) 2478
BtsIMutI CAGTG 4 cut(s) 5, 180, 2129, 2478
BtuMI TCGCGA 1 cut(s) 460
Cac8I GCNNGC 4 cut(s) 304, 602, 1588, 1661
CaiI CAGNNNCTG 1 cut(s) 1694
CfoI GCGC 2 cut(s) 279, 1974
Cfr13I GGNCC 7 cut(s) 126, 324, 1405, 2105, 2106, 2181, 2218
CseI GACGC 2 cut(s) 88, 895
Csp6I GTAC 2 cut(s) 1235, 1705
CviQI GTAC 2 cut(s) 1235, 1705
DdeI CTNAG 9 cut(s) 155, 183, 215, 450, 678, 1794, 1872, 1987, 2490
DpnI GATC 5 cut(s) 213, 297, 867, 876, 2082
DpnII GATC 5 cut(s) 211, 295, 865, 874, 2080
Eam1104I CTCTTC 1 cut(s) 1268
EarI CTCTTC 1 cut(s) 1268
Ecl136II GAGCTC 1 cut(s) 2305
Eco130I CCWWGG 1 cut(s) 2015
Eco24I GRGCYC 3 cut(s) 1588, 2109, 2307
Eco31I GGTCTC 2 cut(s) 1151, 2235
Eco32I GATATC 1 cut(s) 844
Eco47I GGWCC 2 cut(s) 324, 2218
Eco53kI GAGCTC 1 cut(s) 2305
Eco81I CCTNAGG 1 cut(s) 678
EcoICRI GAGCTC 1 cut(s) 2305
EcoO109I RGGNCCY 2 cut(s) 2105, 2106
EcoRII CCWGG 1 cut(s) 2174
EcoRV GATATC 1 cut(s) 844
EcoT14I CCWWGG 1 cut(s) 2015
EcoT22I ATGCAT 2 cut(s) 1042, 1485
EcoT38I GRGCYC 3 cut(s) 1588, 2109, 2307
ErhI CCWWGG 1 cut(s) 2015
FalI AAGNNNNNCTT 2 cut(s) 410, 442
FaqI GGGAC 3 cut(s) 303, 454, 2140
FauI CCCGC 2 cut(s) 71, 311
FbaI TGATCA 2 cut(s) 295, 2080
FblI GTMKAC 1 cut(s) 466
Fnu4HI GCNGC 7 cut(s) 27, 44, 1128, 1331, 1408, 1515, 1799
FokI GGATG 6 cut(s) 200, 524, 736, 1360, 1713, 2183
FriOI GRGCYC 3 cut(s) 1588, 2109, 2307
Fsp4HI GCNGC 7 cut(s) 27, 44, 1128, 1331, 1408, 1515, 1799
FspBI CTAG 2 cut(s) 497, 2024
GlaI GCGC 2 cut(s) 278, 1973
GluI GCNGC 7 cut(s) 27, 44, 1128, 1331, 1408, 1515, 1799
HaeIII GGCC 4 cut(s) 128, 1407, 2107, 2183
HapII CCGG 2 cut(s) 94, 606
HgaI GACGC 2 cut(s) 88, 895
HhaI GCGC 2 cut(s) 279, 1974
Hin1I GRCGYC 3 cut(s) 99, 443, 906
Hin6I GCGC 2 cut(s) 277, 1972
HinP1I GCGC 2 cut(s) 277, 1972
HincII GTYRAC 3 cut(s) 57, 135, 1878
HindII GTYRAC 3 cut(s) 57, 135, 1878
HpaI GTTAAC 1 cut(s) 135
HpaII CCGG 2 cut(s) 94, 606
HphI GGTGA 6 cut(s) 527, 1565, 1622, 1826, 2077, 2299
Hpy166II GTNNAC 4 cut(s) 57, 135, 467, 1878
Hpy8I GTNNAC 4 cut(s) 57, 135, 467, 1878
Hpy99I CGWCG 1 cut(s) 911
HpyAV CCTTC 6 cut(s) 501, 557, 658, 1235, 1910, 2000
HpyCH4III ACNGT 5 cut(s) 201, 1220, 1749, 1833, 2133
HpyCH4IV ACGT 2 cut(s) 292, 443
HpyF10VI GCNNNNNNNGC 6 cut(s) 146, 1511, 2113, 2180, 2302, 2521
HpyF3I CTNAG 9 cut(s) 155, 183, 215, 450, 678, 1794, 1872, 1987, 2490
HpySE526I ACGT 2 cut(s) 292, 443
Hsp92I GRCGYC 3 cut(s) 99, 443, 906
HspAI GCGC 2 cut(s) 277, 1972
Ksp22I TGATCA 2 cut(s) 295, 2080
KspAI GTTAAC 1 cut(s) 135
Kzo9I GATC 5 cut(s) 211, 295, 865, 874, 2080
LmnI GCTCC 5 cut(s) 146, 385, 911, 971, 2302
Lsp1109I GCAGC 4 cut(s) 30, 1114, 1526, 1785
LweI GCATC 5 cut(s) 151, 178, 646, 2125, 2161
MaeI CTAG 2 cut(s) 497, 2024
MaeII ACGT 2 cut(s) 292, 443
MaeIII GTNAC 8 cut(s) 515, 721, 934, 1624, 1726, 1827, 2155, 2396
MalI GATC 5 cut(s) 213, 297, 867, 876, 2082
MbiI CCGCTC 2 cut(s) 149, 388
MboI GATC 5 cut(s) 211, 295, 865, 874, 2080
MboII GAAGA 8 cut(s) 251, 385, 388, 628, 1250, 1285, 1553, 2111
MfeI CAATTG 3 cut(s) 1777, 2401, 2429
MhlI GDGCHC 5 cut(s) 156, 1588, 1770, 2109, 2307
MlyI GAGTC 1 cut(s) 1129
MmeI TCCRAC 6 cut(s) 228, 484, 889, 1518, 1983, 2329
Mph1103I ATGCAT 2 cut(s) 1042, 1485
MseI TTAA 8 cut(s) 134, 342, 809, 827, 891, 1053, 1494, 1965
MslI CAYNNNNRTG 4 cut(s) 266, 564, 651, 1949
MspA1I CMGCKG 1 cut(s) 2524
MspI CCGG 2 cut(s) 94, 606
MspR9I CCNGG 3 cut(s) 95, 606, 2176
MunI CAATTG 3 cut(s) 1777, 2401, 2429
Mva1269I GAATGC 2 cut(s) 2016, 2473
MvaI CCWGG 1 cut(s) 2176
MvnI CGCG 3 cut(s) 66, 460, 1410
MwoI GCNNNNNNNGC 6 cut(s) 146, 1511, 2113, 2180, 2302, 2521
NciI CCSGG 2 cut(s) 95, 606
NdeII GATC 5 cut(s) 211, 295, 865, 874, 2080
NlaIV GGNNCC 4 cut(s) 973, 2107, 2108, 2415
NmeAIII GCCGAG 1 cut(s) 190
NmuCI GTSAC 4 cut(s) 515, 721, 934, 2155
NruI TCGCGA 1 cut(s) 460
NsiI ATGCAT 2 cut(s) 1042, 1485
NspI RCATGY 5 cut(s) 247, 604, 956, 1040, 2278
PaeI GCATGC 1 cut(s) 604
PciI ACATGT 2 cut(s) 243, 2274
PctI GAATGC 2 cut(s) 2016, 2473
PkrI GCNGC 7 cut(s) 28, 45, 1129, 1332, 1409, 1516, 1800
PleI GAGTC 1 cut(s) 1129
PpsI GAGTC 1 cut(s) 1129
PscI ACATGT 2 cut(s) 243, 2274
PshAI GACNNNNGTC 1 cut(s) 2162
PshBI ATTAAT 1 cut(s) 1965
Psp124BI GAGCTC 1 cut(s) 2307
Psp6I CCWGG 1 cut(s) 2174
PspGI CCWGG 1 cut(s) 2174
PspN4I GGNNCC 4 cut(s) 973, 2107, 2108, 2415
PspOMI GGGCCC 1 cut(s) 2105
PspPI GGNCC 7 cut(s) 126, 324, 1405, 2105, 2106, 2181, 2218
PstNI CAGNNNCTG 1 cut(s) 1694
RruI TCGCGA 1 cut(s) 460
RsaI GTAC 2 cut(s) 1236, 1706
RsaNI GTAC 2 cut(s) 1235, 1705
RseI CAYNNNNRTG 4 cut(s) 266, 564, 651, 1949
SacI GAGCTC 1 cut(s) 2307
SaqAI TTAA 8 cut(s) 134, 342, 809, 827, 891, 1053, 1494, 1965
SatI GCNGC 7 cut(s) 27, 44, 1128, 1331, 1408, 1515, 1799
Sau3AI GATC 5 cut(s) 211, 295, 865, 874, 2080
Sau96I GGNCC 7 cut(s) 126, 324, 1405, 2105, 2106, 2181, 2218
SchI GAGTC 1 cut(s) 1129
ScrFI CCNGG 3 cut(s) 95, 606, 2176
SduI GDGCHC 5 cut(s) 156, 1588, 1770, 2109, 2307
SfaNI GCATC 5 cut(s) 151, 178, 646, 2125, 2161
SfcI CTRYAG 1 cut(s) 591
SinI GGWCC 2 cut(s) 324, 2218
SmiMI CAYNNNNRTG 4 cut(s) 266, 564, 651, 1949
SmlI CTYRAG 3 cut(s) 2140, 2297, 2537
SmoI CTYRAG 3 cut(s) 2140, 2297, 2537
SphI GCATGC 1 cut(s) 604
SspI AATATT 2 cut(s) 1026, 1185
SspMI CTAG 2 cut(s) 497, 2024
SstI GAGCTC 1 cut(s) 2307
StyD4I CCNGG 3 cut(s) 93, 604, 2174
StyI CCWWGG 1 cut(s) 2015
TaaI ACNGT 5 cut(s) 201, 1220, 1749, 1833, 2133
TaiI ACGT 2 cut(s) 295, 446
TaqI TCGA 5 cut(s) 207, 237, 1420, 2029, 2122
TauI GCSGC 3 cut(s) 29, 1333, 1410
Tru1I TTAA 8 cut(s) 134, 342, 809, 827, 891, 1053, 1494, 1965
Tru9I TTAA 8 cut(s) 134, 342, 809, 827, 891, 1053, 1494, 1965
TscAI CASTG 4 cut(s) 12, 187, 2136, 2478
TseFI GTSAC 4 cut(s) 515, 721, 934, 2155
TseI GCWGC 4 cut(s) 43, 1127, 1514, 1798
Tsp45I GTSAC 4 cut(s) 515, 721, 934, 2155
TspDTI ATGAA 9 cut(s) 374, 386, 504, 576, 677, 974, 1591, 2328, 2480
TspGWI ACGGA 4 cut(s) 398, 424, 2251, 2270
TspRI CASTG 4 cut(s) 12, 187, 2136, 2478
VpaK11BI GGWCC 2 cut(s) 324, 2218
VspI ATTAAT 1 cut(s) 1965
XapI RAATTY 6 cut(s) 254, 344, 783, 1316, 1613, 2333
XceI RCATGY 5 cut(s) 247, 604, 956, 1040, 2278
XmiI GTMKAC 1 cut(s) 466
XspI CTAG 2 cut(s) 497, 2024
ZraI GACGTC 1 cut(s) 444
Zsp2I ATGCAT 2 cut(s) 1042, 1485
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.