disease resistance
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Rx_N | PF18052 | 7 - 91 | 3.2e-19 | Rx N-terminal domain |
| NB-ARC | PF00931 | 169 - 342 | 1.8e-33 | NB-ARC domain |
| WHD_DRP | PF23559 | 422 - 490 | 2e-24 | Disease resistance protein Winged helix domain |
| LRR_14 | PF23598 | 563 - 854 | 9.3e-31 | Leucine-rich repeat region |
| LRR_R13L1-DRL21 | PF25019 | 680 - 800 | 2.5e-33 | R13L1/DRL21 LRRs |
| LRR_RPS2 | PF23247 | 1048 - 1184 | 8.1e-09 | Plant disease resistance protein RPS2-like, leucine-rich repeats |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc65I | GGTACC | 3 cut(s) | 1779, 2441, 3021 |
| AccB1I | GGYRCC | 4 cut(s) | 1779, 2441, 3021, 3795 |
| AccB7I | CCANNNNNTGG | 3 cut(s) | 265, 491, 574 |
| AccII | CGCG | 1 cut(s) | 1644 |
| AciI | CCGC | 4 cut(s) | 185, 1371, 1615, 1644 |
| AclI | AACGTT | 2 cut(s) | 1609, 1994 |
| AclWI | GGATC | 5 cut(s) | 422, 3545, 3682, 3695, 3695 |
| AcoI | YGGCCR | 1 cut(s) | 576 |
| AcsI | RAATTY | 7 cut(s) | 329, 1036, 1283, 1583, 1903, 2695, 3706 |
| AcuI | CTGAAG | 5 cut(s) | 17, 673, 1787, 3509, 3800 |
| AcyI | GRCGYC | 1 cut(s) | 3796 |
| AdeI | CACNNNGTG | 1 cut(s) | 3638 |
| AfeI | AGCGCT | 2 cut(s) | 2910, 3228 |
| AfiI | CCNNNNNNNGG | 9 cut(s) | 265, 286, 491, 574, 599, 1970, 2357, 3425, 3980 |
| AflII | CTTAAG | 1 cut(s) | 2749 |
| AflIII | ACRYGT | 1 cut(s) | 2208 |
| AjnI | CCWGG | 4 cut(s) | 430, 892, 3690, 3952 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 2511, 2543 |
| Alw21I | GWGCWC | 3 cut(s) | 210, 892, 1716 |
| AlwI | GGATC | 5 cut(s) | 422, 3545, 3682, 3695, 3695 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 40, 2833 |
| Ama87I | CYCGRG | 4 cut(s) | 20, 441, 735, 3418 |
| Aor51HI | AGCGCT | 2 cut(s) | 2910, 3228 |
| AoxI | GGCC | 8 cut(s) | 288, 576, 2047, 3211, 3352, 3810, 3971, 3982 |
| ApeKI | GCWGC | 7 cut(s) | 40, 148, 1009, 1091, 1478, 2827, 3742 |
| ApoI | RAATTY | 7 cut(s) | 329, 1036, 1283, 1583, 1903, 2695, 3706 |
| ArsI | GACNNNNNNTTYG | 4 cut(s) | 854, 886, 1528, 1560 |
| AseI | ATTAAT | 1 cut(s) | 1911 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 1002, 1525 |
| Asp718I | GGTACC | 3 cut(s) | 1779, 2441, 3021 |
| AspLEI | GCGC | 3 cut(s) | 2911, 3229, 3798 |
| AspS9I | GGNCC | 5 cut(s) | 288, 482, 2048, 3811, 3972 |
| AsuC2I | CCSGG | 3 cut(s) | 594, 736, 737 |
| AsuHPI | GGTGA | 8 cut(s) | 166, 199, 269, 280, 922, 1385, 1472, 2882 |
| AsuII | TTCGAA | 1 cut(s) | 1587 |
| AsuNHI | GCTAGC | 1 cut(s) | 3865 |
| AvaI | CYCGRG | 4 cut(s) | 20, 441, 735, 3418 |
| AvaII | GGWCC | 1 cut(s) | 482 |
| BalI | TGGCCA | 1 cut(s) | 578 |
| BamHI | GGATCC | 1 cut(s) | 3687 |
| BanI | GGYRCC | 4 cut(s) | 1779, 2441, 3021, 3795 |
| BanII | GRGCYC | 1 cut(s) | 210 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 1660, 1692 |
| BauI | CACGAG | 1 cut(s) | 918 |
| BbsI | GAAGAC | 2 cut(s) | 510, 977 |
| Bbv12I | GWGCWC | 3 cut(s) | 210, 892, 1716 |
| BbvI | GCAGC | 7 cut(s) | 27, 135, 1021, 1078, 1465, 2839, 3729 |
| BccI | CCATC | 9 cut(s) | 473, 1309, 1351, 1511, 1565, 2281, 2496, 3193, 3727 |
| BciT130I | CCWGG | 4 cut(s) | 432, 894, 3692, 3954 |
| BciVI | GTATCC | 1 cut(s) | 3139 |
| BclI | TGATCA | 1 cut(s) | 270 |
| BcnI | CCSGG | 3 cut(s) | 594, 736, 737 |
| BfaI | CTAG | 6 cut(s) | 1935, 1983, 2022, 2165, 2471, 3866 |
| BfmI | CTRYAG | 2 cut(s) | 149, 2825 |
| BfoI | RGCGCY | 3 cut(s) | 2912, 3230, 3799 |
| BfrI | CTTAAG | 1 cut(s) | 2749 |
| BfuI | GTATCC | 1 cut(s) | 3139 |
| BglII | AGATCT | 2 cut(s) | 775, 2977 |
| BisI | GCNGC | 7 cut(s) | 41, 149, 1010, 1092, 1479, 2828, 3743 |
| BlsI | GCNGC | 7 cut(s) | 42, 150, 1011, 1093, 1480, 2829, 3744 |
| BmcAI | AGTACT | 5 cut(s) | 838, 1203, 1703, 2460, 3164 |
| Bme1390I | CCNGG | 7 cut(s) | 432, 594, 736, 737, 894, 3692, 3954 |
| Bme18I | GGWCC | 1 cut(s) | 482 |
| BmeT110I | CYCGRG | 4 cut(s) | 20, 441, 735, 3418 |
| BmgT120I | GGNCC | 5 cut(s) | 288, 482, 2048, 3811, 3972 |
| BmiI | GGNNCC | 7 cut(s) | 289, 1781, 2050, 2443, 3023, 3689, 3797 |
| BmrFI | CCNGG | 7 cut(s) | 432, 594, 736, 737, 894, 3692, 3954 |
| BmtI | GCTAGC | 1 cut(s) | 3869 |
| BpiI | GAAGAC | 2 cut(s) | 510, 977 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 3092, 3124 |
| BpmI | CTGGAG | 3 cut(s) | 851, 1503, 2483 |
| Bpu10I | CCTNAGC | 1 cut(s) | 3791 |
| Bpu14I | TTCGAA | 1 cut(s) | 1587 |
| BpuEI | CTTGAG | 4 cut(s) | 716, 2360, 2696, 3179 |
| BpuMI | CCSGG | 3 cut(s) | 594, 736, 737 |
| Bsa29I | ATCGAT | 1 cut(s) | 2103 |
| BsaAI | YACGTR | 1 cut(s) | 3009 |
| BsaHI | GRCGYC | 1 cut(s) | 3796 |
| BsaJI | CCNNGG | 4 cut(s) | 88, 735, 3691, 3953 |
| BsaXI | ACNNNNNCTCC | 8 cut(s) | 332, 362, 826, 856, 1379, 1409, 3875, 3905 |
| Bsc4I | CCNNNNNNNGG | 9 cut(s) | 265, 286, 491, 574, 599, 1970, 2357, 3425, 3980 |
| Bse118I | RCCGGY | 1 cut(s) | 290 |
| Bse1I | ACTGG | 7 cut(s) | 485, 868, 1628, 2456, 2466, 3267, 3974 |
| Bse3DI | GCAATG | 3 cut(s) | 1081, 2156, 2641 |
| BseBI | CCWGG | 4 cut(s) | 432, 894, 3692, 3954 |
| BseCI | ATCGAT | 1 cut(s) | 2103 |
| BseDI | CCNNGG | 4 cut(s) | 88, 735, 3691, 3953 |
| BseLI | CCNNNNNNNGG | 9 cut(s) | 265, 286, 491, 574, 599, 1970, 2357, 3425, 3980 |
| BseMI | GCAATG | 3 cut(s) | 1081, 2156, 2641 |
| BseMII | CTCAG | 6 cut(s) | 85, 150, 773, 2417, 2825, 3665 |
| BseNI | ACTGG | 7 cut(s) | 485, 868, 1628, 2456, 2466, 3267, 3974 |
| BseRI | GAGGAG | 5 cut(s) | 2196, 2758, 3438, 3743, 3896 |
| BseXI | GCAGC | 7 cut(s) | 27, 135, 1021, 1078, 1465, 2839, 3729 |
| BseYI | CCCAGC | 1 cut(s) | 258 |
| Bsh1236I | CGCG | 1 cut(s) | 1644 |
| Bsh1285I | CGRYCG | 1 cut(s) | 1648 |
| BshFI | GGCC | 8 cut(s) | 290, 578, 2049, 3213, 3354, 3812, 3973, 3984 |
| BshNI | GGYRCC | 4 cut(s) | 1779, 2441, 3021, 3795 |
| BshVI | ATCGAT | 1 cut(s) | 2103 |
| BsiEI | CGRYCG | 1 cut(s) | 1648 |
| BsiHKAI | GWGCWC | 3 cut(s) | 210, 892, 1716 |
| BsiHKCI | CYCGRG | 4 cut(s) | 20, 441, 735, 3418 |
| BsiSI | CCGG | 4 cut(s) | 291, 593, 736, 1748 |
| BslFI | GGGAC | 2 cut(s) | 609, 2083 |
| BslI | CCNNNNNNNGG | 9 cut(s) | 265, 286, 491, 574, 599, 1970, 2357, 3425, 3980 |
| BsmFI | GGGAC | 2 cut(s) | 609, 2083 |
| BsmI | GAATGC | 3 cut(s) | 1962, 2741, 3068 |
| BsnI | GGCC | 8 cut(s) | 290, 578, 2049, 3213, 3354, 3812, 3973, 3984 |
| BsoBI | CYCGRG | 4 cut(s) | 20, 441, 735, 3418 |
| Bsp119I | TTCGAA | 1 cut(s) | 1587 |
| Bsp1286I | GDGCHC | 3 cut(s) | 210, 892, 1716 |
| Bsp1407I | TGTACA | 1 cut(s) | 554 |
| BspACI | CCGC | 4 cut(s) | 185, 1371, 1615, 1644 |
| BspANI | GGCC | 8 cut(s) | 290, 578, 2049, 3213, 3354, 3812, 3973, 3984 |
| BspCNI | CTCAG | 6 cut(s) | 84, 151, 774, 2416, 2826, 3666 |
| BspDI | ATCGAT | 1 cut(s) | 2103 |
| BspFNI | CGCG | 1 cut(s) | 1644 |
| BspHI | TCATGA | 1 cut(s) | 541 |
| BspLI | GGNNCC | 7 cut(s) | 289, 1781, 2050, 2443, 3023, 3689, 3797 |
| BspMAI | CTGCAG | 2 cut(s) | 153, 2829 |
| BspOI | GCTAGC | 1 cut(s) | 3869 |
| BspPI | GGATC | 5 cut(s) | 422, 3545, 3682, 3695, 3695 |
| BspQI | GCTCTTC | 1 cut(s) | 3040 |
| BspT104I | TTCGAA | 1 cut(s) | 1587 |
| BspT107I | GGYRCC | 4 cut(s) | 1779, 2441, 3021, 3795 |
| BspTI | CTTAAG | 1 cut(s) | 2749 |
| BsrDI | GCAATG | 3 cut(s) | 1081, 2156, 2641 |
| BsrFI | RCCGGY | 1 cut(s) | 290 |
| BsrGI | TGTACA | 1 cut(s) | 554 |
| BsrI | ACTGG | 7 cut(s) | 485, 868, 1628, 2456, 2466, 3267, 3974 |
| BssAI | RCCGGY | 1 cut(s) | 290 |
| BssECI | CCNNGG | 4 cut(s) | 88, 735, 3691, 3953 |
| BssNI | GRCGYC | 1 cut(s) | 3796 |
| BssSI | CACGAG | 1 cut(s) | 918 |
| BssT1I | CCWWGG | 1 cut(s) | 88 |
| Bst2BI | CACGAG | 1 cut(s) | 918 |
| Bst2UI | CCWGG | 4 cut(s) | 432, 894, 3692, 3954 |
| Bst6I | CTCTTC | 8 cut(s) | 1235, 2390, 2847, 3040, 3121, 3528, 3567, 3935 |
| BstACI | GRCGYC | 1 cut(s) | 3796 |
| BstAFI | CTTAAG | 1 cut(s) | 2749 |
| BstAUI | TGTACA | 1 cut(s) | 554 |
| BstBAI | YACGTR | 1 cut(s) | 3009 |
| BstBI | TTCGAA | 1 cut(s) | 1587 |
| BstC8I | GCNNGC | 6 cut(s) | 292, 1132, 1940, 1988, 3629, 3867 |
| BstFNI | CGCG | 1 cut(s) | 1644 |
| BstH2I | RGCGCY | 3 cut(s) | 2912, 3230, 3799 |
| BstHHI | GCGC | 3 cut(s) | 2911, 3229, 3798 |
| BstMCI | CGRYCG | 1 cut(s) | 1648 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 140, 205, 1475, 2123, 2745, 3804 |
| BstNI | CCWGG | 4 cut(s) | 432, 894, 3692, 3954 |
| BstNSI | RCATGY | 4 cut(s) | 626, 1942, 2212, 2958 |
| BstSCI | CCNGG | 7 cut(s) | 430, 592, 734, 735, 892, 3690, 3952 |
| BstSFI | CTRYAG | 2 cut(s) | 149, 2825 |
| BstSNI | TACGTA | 1 cut(s) | 3009 |
| BstUI | CGCG | 1 cut(s) | 1644 |
| BstV1I | GCAGC | 7 cut(s) | 27, 135, 1021, 1078, 1465, 2839, 3729 |
| BstV2I | GAAGAC | 2 cut(s) | 510, 977 |
| BstX2I | RGATCY | 4 cut(s) | 775, 2977, 3687, 3700 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 666, 3505 |
| BstYI | RGATCY | 4 cut(s) | 775, 2977, 3687, 3700 |
| Bsu15I | ATCGAT | 1 cut(s) | 2103 |
| BsuI | GTATCC | 1 cut(s) | 3139 |
| BsuRI | GGCC | 8 cut(s) | 290, 578, 2049, 3213, 3354, 3812, 3973, 3984 |
| BsuTUI | ATCGAT | 1 cut(s) | 2103 |
| BtsIMutI | CAGTG | 5 cut(s) | 492, 2709, 3127, 3295, 3967 |
| Cac8I | GCNNGC | 6 cut(s) | 292, 1132, 1940, 1988, 3629, 3867 |
| CaiI | CAGNNNCTG | 2 cut(s) | 40, 2833 |
| CciI | TCATGA | 1 cut(s) | 541 |
| CfoI | GCGC | 3 cut(s) | 2911, 3229, 3798 |
| Cfr10I | RCCGGY | 1 cut(s) | 290 |
| Cfr13I | GGNCC | 5 cut(s) | 288, 482, 2048, 3811, 3972 |
| Cfr9I | CCCGGG | 1 cut(s) | 735 |
| ClaI | ATCGAT | 1 cut(s) | 2103 |
| DinI | GGCGCC | 1 cut(s) | 3797 |
| DraIII | CACNNNGTG | 1 cut(s) | 3638 |
| EaeI | YGGCCR | 1 cut(s) | 576 |
| Eam1104I | CTCTTC | 8 cut(s) | 1235, 2390, 2847, 3040, 3121, 3528, 3567, 3935 |
| EarI | CTCTTC | 8 cut(s) | 1235, 2390, 2847, 3040, 3121, 3528, 3567, 3935 |
| Ecl136II | GAGCTC | 1 cut(s) | 208 |
| Eco105I | TACGTA | 1 cut(s) | 3009 |
| Eco130I | CCWWGG | 1 cut(s) | 88 |
| Eco147I | AGGCCT | 1 cut(s) | 3354 |
| Eco24I | GRGCYC | 1 cut(s) | 210 |
| Eco32I | GATATC | 2 cut(s) | 1489, 1730 |
| Eco47I | GGWCC | 1 cut(s) | 482 |
| Eco47III | AGCGCT | 2 cut(s) | 2910, 3228 |
| Eco53kI | GAGCTC | 1 cut(s) | 208 |
| Eco57I | CTGAAG | 5 cut(s) | 17, 673, 1787, 3509, 3800 |
| Eco88I | CYCGRG | 4 cut(s) | 20, 441, 735, 3418 |
| EcoICRI | GAGCTC | 1 cut(s) | 208 |
| EcoO109I | RGGNCCY | 2 cut(s) | 2048, 3811 |
| EcoRII | CCWGG | 4 cut(s) | 430, 892, 3690, 3952 |
| EcoRV | GATATC | 2 cut(s) | 1489, 1730 |
| EcoT14I | CCWWGG | 1 cut(s) | 88 |
| EcoT22I | ATGCAT | 4 cut(s) | 1449, 2158, 2741, 3372 |
| EcoT38I | GRGCYC | 1 cut(s) | 210 |
| EgeI | GGCGCC | 1 cut(s) | 3797 |
| EheI | GGCGCC | 1 cut(s) | 3797 |
| ErhI | CCWWGG | 1 cut(s) | 88 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 1232, 1264, 2369, 2401 |
| FaqI | GGGAC | 2 cut(s) | 609, 2083 |
| FauNDI | CATATG | 2 cut(s) | 469, 2682 |
| FbaI | TGATCA | 1 cut(s) | 270 |
| Fnu4HI | GCNGC | 7 cut(s) | 41, 149, 1010, 1092, 1479, 2828, 3743 |
| FriOI | GRGCYC | 1 cut(s) | 210 |
| Fsp4HI | GCNGC | 7 cut(s) | 41, 149, 1010, 1092, 1479, 2828, 3743 |
| FspBI | CTAG | 6 cut(s) | 1935, 1983, 2022, 2165, 2471, 3866 |
| GlaI | GCGC | 3 cut(s) | 2910, 3228, 3797 |
| GluI | GCNGC | 7 cut(s) | 41, 149, 1010, 1092, 1479, 2828, 3743 |
| GsaI | CCCAGC | 1 cut(s) | 262 |
| GsuI | CTGGAG | 3 cut(s) | 851, 1503, 2483 |
| HaeII | RGCGCY | 3 cut(s) | 2912, 3230, 3799 |
| HaeIII | GGCC | 8 cut(s) | 290, 578, 2049, 3213, 3354, 3812, 3973, 3984 |
| HapII | CCGG | 4 cut(s) | 291, 593, 736, 1748 |
| HhaI | GCGC | 3 cut(s) | 2911, 3229, 3798 |
| Hin1I | GRCGYC | 1 cut(s) | 3796 |
| Hin6I | GCGC | 3 cut(s) | 2909, 3227, 3796 |
| HinP1I | GCGC | 3 cut(s) | 2909, 3227, 3796 |
| HincII | GTYRAC | 3 cut(s) | 54, 1976, 2662 |
| HindII | GTYRAC | 3 cut(s) | 54, 1976, 2662 |
| HindIII | AAGCTT | 1 cut(s) | 3489 |
| HpaII | CCGG | 4 cut(s) | 291, 593, 736, 1748 |
| HphI | GGTGA | 8 cut(s) | 166, 199, 269, 280, 922, 1385, 1472, 2882 |
| Hpy166II | GTNNAC | 6 cut(s) | 54, 1976, 2573, 2662, 3257, 3613 |
| Hpy8I | GTNNAC | 6 cut(s) | 54, 1976, 2573, 2662, 3257, 3613 |
| HpyCH4IV | ACGT | 7 cut(s) | 1117, 1609, 1850, 1918, 1994, 3008, 3622 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 140, 205, 1475, 2123, 2745, 3804 |
| HpySE526I | ACGT | 7 cut(s) | 1117, 1609, 1850, 1918, 1994, 3008, 3622 |
| Hsp92I | GRCGYC | 1 cut(s) | 3796 |
| HspAI | GCGC | 3 cut(s) | 2909, 3227, 3796 |
| KasI | GGCGCC | 1 cut(s) | 3795 |
| KpnI | GGTACC | 3 cut(s) | 1783, 2445, 3025 |
| KroI | GCCGGC | 1 cut(s) | 290 |
| KroNI | GCCGGC | 1 cut(s) | 292 |
| Ksp22I | TGATCA | 1 cut(s) | 270 |
| LguI | GCTCTTC | 1 cut(s) | 3040 |
| LmnI | GCTCC | 6 cut(s) | 870, 887, 947, 1387, 2745, 3750 |
| Lsp1109I | GCAGC | 7 cut(s) | 27, 135, 1021, 1078, 1465, 2839, 3729 |
| MaeI | CTAG | 6 cut(s) | 1935, 1983, 2022, 2165, 2471, 3866 |
| MaeII | ACGT | 7 cut(s) | 1117, 1609, 1850, 1918, 1994, 3008, 3622 |
| MaeIII | GTNAC | 9 cut(s) | 80, 727, 842, 910, 1373, 1550, 2670, 3104, 3542 |
| MfeI | CAATTG | 5 cut(s) | 1755, 2576, 2882, 3472, 3922 |
| MflI | RGATCY | 4 cut(s) | 775, 2977, 3687, 3700 |
| MhlI | GDGCHC | 3 cut(s) | 210, 892, 1716 |
| MlsI | TGGCCA | 1 cut(s) | 578 |
| MluNI | TGGCCA | 1 cut(s) | 578 |
| Mly113I | GGCGCC | 1 cut(s) | 3796 |
| MlyI | GAGTC | 4 cut(s) | 1093, 1531, 2036, 3657 |
| MmeI | TCCRAC | 4 cut(s) | 456, 472, 865, 3471 |
| Mox20I | TGGCCA | 1 cut(s) | 578 |
| Mph1103I | ATGCAT | 4 cut(s) | 1449, 2158, 2741, 3372 |
| MroNI | GCCGGC | 1 cut(s) | 290 |
| MroXI | GAANNNNTTC | 2 cut(s) | 1002, 1525 |
| MscI | TGGCCA | 1 cut(s) | 578 |
| MslI | CAYNNNNRTG | 5 cut(s) | 282, 960, 2105, 2281, 2800 |
| Msp20I | TGGCCA | 1 cut(s) | 578 |
| MspCI | CTTAAG | 1 cut(s) | 2749 |
| MspI | CCGG | 4 cut(s) | 291, 593, 736, 1748 |
| MspR9I | CCNGG | 7 cut(s) | 432, 594, 736, 737, 894, 3692, 3954 |
| MunI | CAATTG | 5 cut(s) | 1755, 2576, 2882, 3472, 3922 |
| Mva1269I | GAATGC | 3 cut(s) | 1962, 2741, 3068 |
| MvaI | CCWGG | 4 cut(s) | 432, 894, 3692, 3954 |
| MvnI | CGCG | 1 cut(s) | 1644 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 140, 205, 1475, 2123, 2745, 3804 |
| NaeI | GCCGGC | 1 cut(s) | 292 |
| NarI | GGCGCC | 1 cut(s) | 3796 |
| NciI | CCSGG | 3 cut(s) | 594, 736, 737 |
| NdeI | CATATG | 2 cut(s) | 469, 2682 |
| NgoMIV | GCCGGC | 1 cut(s) | 290 |
| NheI | GCTAGC | 1 cut(s) | 3865 |
| NlaIV | GGNNCC | 7 cut(s) | 289, 1781, 2050, 2443, 3023, 3689, 3797 |
| NmeAIII | GCCGAG | 1 cut(s) | 486 |
| NmuCI | GTSAC | 5 cut(s) | 80, 727, 842, 910, 1373 |
| NsiI | ATGCAT | 4 cut(s) | 1449, 2158, 2741, 3372 |
| NspI | RCATGY | 4 cut(s) | 626, 1942, 2212, 2958 |
| NspV | TTCGAA | 1 cut(s) | 1587 |
| PacI | TTAATTAA | 1 cut(s) | 1911 |
| PaeI | GCATGC | 1 cut(s) | 1942 |
| PaeR7I | CTCGAG | 1 cut(s) | 441 |
| PagI | TCATGA | 1 cut(s) | 541 |
| PceI | AGGCCT | 1 cut(s) | 3354 |
| PciI | ACATGT | 1 cut(s) | 2208 |
| PciSI | GCTCTTC | 1 cut(s) | 3040 |
| PctI | GAATGC | 3 cut(s) | 1962, 2741, 3068 |
| PdiI | GCCGGC | 1 cut(s) | 292 |
| PdmI | GAANNNNTTC | 2 cut(s) | 1002, 1525 |
| PflMI | CCANNNNNTGG | 3 cut(s) | 265, 491, 574 |
| PkrI | GCNGC | 7 cut(s) | 42, 150, 1011, 1093, 1480, 2829, 3744 |
| PleI | GAGTC | 4 cut(s) | 1093, 1531, 2035, 3657 |
| PluTI | GGCGCC | 1 cut(s) | 3799 |
| PpsI | GAGTC | 4 cut(s) | 1093, 1531, 2035, 3657 |
| Ppu21I | YACGTR | 1 cut(s) | 3009 |
| PscI | ACATGT | 1 cut(s) | 2208 |
| PshBI | ATTAAT | 1 cut(s) | 1911 |
| Psp124BI | GAGCTC | 1 cut(s) | 210 |
| Psp1406I | AACGTT | 2 cut(s) | 1609, 1994 |
| Psp6I | CCWGG | 4 cut(s) | 430, 892, 3690, 3952 |
| PspFI | CCCAGC | 1 cut(s) | 258 |
| PspGI | CCWGG | 4 cut(s) | 430, 892, 3690, 3952 |
| PspN4I | GGNNCC | 7 cut(s) | 289, 1781, 2050, 2443, 3023, 3689, 3797 |
| PspPI | GGNCC | 5 cut(s) | 288, 482, 2048, 3811, 3972 |
| PspXI | VCTCGAGB | 1 cut(s) | 441 |
| PstI | CTGCAG | 2 cut(s) | 153, 2829 |
| PstNI | CAGNNNCTG | 2 cut(s) | 40, 2833 |
| PsuI | RGATCY | 4 cut(s) | 775, 2977, 3687, 3700 |
| RseI | CAYNNNNRTG | 5 cut(s) | 282, 960, 2105, 2281, 2800 |
| SacI | GAGCTC | 1 cut(s) | 210 |
| SapI | GCTCTTC | 1 cut(s) | 3040 |
| SatI | GCNGC | 7 cut(s) | 41, 149, 1010, 1092, 1479, 2828, 3743 |
| Sau96I | GGNCC | 5 cut(s) | 288, 482, 2048, 3811, 3972 |
| ScaI | AGTACT | 5 cut(s) | 838, 1203, 1703, 2460, 3164 |
| SchI | GAGTC | 4 cut(s) | 1093, 1531, 2036, 3657 |
| ScrFI | CCNGG | 7 cut(s) | 432, 594, 736, 737, 894, 3692, 3954 |
| SduI | GDGCHC | 3 cut(s) | 210, 892, 1716 |
| SfcI | CTRYAG | 2 cut(s) | 149, 2825 |
| SfoI | GGCGCC | 1 cut(s) | 3797 |
| Sfr274I | CTCGAG | 1 cut(s) | 441 |
| SfuI | TTCGAA | 1 cut(s) | 1587 |
| SinI | GGWCC | 1 cut(s) | 482 |
| SlaI | CTCGAG | 1 cut(s) | 441 |
| SmaI | CCCGGG | 1 cut(s) | 737 |
| SmiMI | CAYNNNNRTG | 5 cut(s) | 282, 960, 2105, 2281, 2800 |
| SmlI | CTYRAG | 6 cut(s) | 441, 695, 2375, 2675, 2749, 3158 |
| SmoI | CTYRAG | 6 cut(s) | 441, 695, 2375, 2675, 2749, 3158 |
| SnaBI | TACGTA | 1 cut(s) | 3009 |
| SphI | GCATGC | 1 cut(s) | 1942 |
| SseBI | AGGCCT | 1 cut(s) | 3354 |
| SsiI | CCGC | 4 cut(s) | 185, 1371, 1615, 1644 |
| SspDI | GGCGCC | 1 cut(s) | 3795 |
| SspMI | CTAG | 6 cut(s) | 1935, 1983, 2022, 2165, 2471, 3866 |
| SstI | GAGCTC | 1 cut(s) | 210 |
| StuI | AGGCCT | 1 cut(s) | 3354 |
| StyD4I | CCNGG | 7 cut(s) | 430, 592, 734, 735, 892, 3690, 3952 |
| StyI | CCWWGG | 1 cut(s) | 88 |
| TaiI | ACGT | 7 cut(s) | 1120, 1612, 1853, 1921, 1997, 3011, 3625 |
| TaqII | GACCGA | 2 cut(s) | 68, 1389 |
| TatI | WGTACW | 8 cut(s) | 119, 554, 836, 1201, 1701, 2458, 3162, 3513 |
| TscAI | CASTG | 5 cut(s) | 492, 2709, 3134, 3295, 3974 |
| TseFI | GTSAC | 5 cut(s) | 80, 727, 842, 910, 1373 |
| TseI | GCWGC | 7 cut(s) | 40, 148, 1009, 1091, 1478, 2827, 3742 |
| Tsp45I | GTSAC | 5 cut(s) | 80, 727, 842, 910, 1373 |
| TspDTI | ATGAA | 9 cut(s) | 359, 456, 516, 1296, 1322, 1455, 1712, 2377, 2790 |
| TspMI | CCCGGG | 1 cut(s) | 735 |
| TspRI | CASTG | 5 cut(s) | 492, 2709, 3134, 3295, 3974 |
| Van91I | CCANNNNNTGG | 3 cut(s) | 265, 491, 574 |
| Vha464I | CTTAAG | 1 cut(s) | 2749 |
| VpaK11BI | GGWCC | 1 cut(s) | 482 |
| VspI | ATTAAT | 1 cut(s) | 1911 |
| XapI | RAATTY | 7 cut(s) | 329, 1036, 1283, 1583, 1903, 2695, 3706 |
| XceI | RCATGY | 4 cut(s) | 626, 1942, 2212, 2958 |
| XcmI | CCANNNNNNNNNTGG | 3 cut(s) | 262, 2633, 3639 |
| XhoI | CTCGAG | 1 cut(s) | 441 |
| XmaI | CCCGGG | 1 cut(s) | 735 |
| XmnI | GAANNNNTTC | 2 cut(s) | 1002, 1525 |
| XspI | CTAG | 6 cut(s) | 1935, 1983, 2022, 2165, 2471, 3866 |
| ZrmI | AGTACT | 5 cut(s) | 838, 1203, 1703, 2460, 3164 |
| Zsp2I | ATGCAT | 4 cut(s) | 1449, 2158, 2741, 3372 |