Rorug02G0295100

disease resistance

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000002
Physical Location & Seq
Reverse (-)
32625540 .. 32626422
883 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug02G0295100.1

Sequence Viewer

Length: 624 bp
ATGCTGTCTCTCTTTGCTGCTTATGCAGGCTATACAAACCTGCAGGTGCAGATCAGAAAAGTAATTCTAGGCTTGGTGTCAATAAGCATTAGCAAGTATTCTGGCTTGAGTTTCAAGTATGAAACACTAGAGAAGGCCACAGATTATTTTAACACCTCGAGAAAAATAGGGGAAGGGGGAGGTGGTACTGTGTTTAAGGGGACTCTTCCGAATGGCAAAACCGTAGCTGTTAAGAGATTGTTCTACAATACCAGGCAATGGGTAGATGAGTTCTTCAATGAGGTGAATTTGATCAGTGGAATTCAGCACAAGCACCTAGTGAAGCTTTTGGGTTGTAGCATTGAAGGCCCTGAGAGCCTGCTGGTGTATGAATATGTGCCTAACAGGAGCCTCGATCAATTCCTTTTCGATAAGAACAACGATCAGTTTCTTAACTGGAAGCAGCGGTTTGATATTATTGTCGGAACAGCTGAAGGGATTGCGTATCTTCATGAAGGCTCTGAAGTAAGAATAATCCACAGGGACATAAAAAGCAGCAATGTTCTTCTGGATGAGAATCATAGCCCAAAGATTGCAGACTTTGGCCTTGCTCGGTGTTTTGCTTCCGACAAGATCTCATCTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

207

Amino Acids

23.32

Weight (kDa)

8.43

Isoelectric Point (pI)

20.51

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 50 - 203 5e-31 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 52 - 202 2.8e-32 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000070)

Species Orthologous Gene IDs
fragaria_vesca FvH4_7g00360 FvH4_7g00850 FvH4_7g02400 FvH4_7g02430 FvH4_7g02450 FvH4_7g25671 FvH4_7g25680 FvH4_7g25683 FvH4_7g26980 FvH4_7g27330 FvH4_7g27355 FvH4_7g27610 FvH4_7g27642 FvH4_7g27890 FvH4_7g27891 FvH4_7g27891 FvH4_7g27891 FvH4_7g28110 FvH4_7g28390
malus_domestica MD00G1070800.v1.1 MD00G1168000.v1.1 MD00G1168300.v1.1 MD00G1168700.v1.1 MD02G1293100.v1.1 MD02G1293200.v1.1 MD02G1314300.v1.1 MD03G1009000.v1.1 MD03G1009400.v1.1 MD03G1042300.v1.1 MD03G1042400.v1.1 MD07G1033600.v1.1 MD07G1033700.v1.1 MD07G1033900.v1.1 MD11G1011400.v1.1 MD11G1011700.v1.1 MD11G1029800.v1.1 MD11G1029900.v1.1 MD11G1030300.v1.1 MD11G1030400.v1.1 MD11G1030500.v1.1 MD11G1031300.v1.1 MD11G1031600.v1.1 MD11G1032000.v1.1 MD11G1033200.v1.1 MD11G1033600.v1.1 MD11G1033800.v1.1 MD11G1033900.v1.1 MD11G1034100.v1.1 MD11G1034400.v1.1 MD11G1040600.v1.1 MD11G1041100.v1.1 MD11G1043100.v1.1 MD11G1043500.v1.1 MD11G1044500.v1.1 MD11G1045100.v1.1 MD11G1045600.v1.1
prunus_persica Prupe.2G022400_v2.0.a1 Prupe.2G022400_v2.0.a1 Prupe.2G022400_v2.0.a1 Prupe.2G022500_v2.0.a1 Prupe.2G022500_v2.0.a1 Prupe.2G022900_v2.0.a1 Prupe.2G023500_v2.0.a1 Prupe.2G023500_v2.0.a1 Prupe.2G023500_v2.0.a1 Prupe.2G023500_v2.0.a1 Prupe.2G023500_v2.0.a1 Prupe.2G023500_v2.0.a1 Prupe.2G023600_v2.0.a1 Prupe.2G028000_v2.0.a1 Prupe.2G030200_v2.0.a1 Prupe.2G067600_v2.0.a1 Prupe.8G117900_v2.0.a1
pyrus_communis pycom02g26350 pycom03g03270 pycom07g02370 pycom11g00750 pycom11g00790 pycom11g02340 pycom11g02370 pycom11g02380 pycom11g02390 pycom11g02410 pycom11g02460 pycom11g02470 pycom11g02500 pycom11g02510 pycom11g02520 pycom11g02530 pycom11g02580 pycom11g02590 pycom11g02680 pycom11g02710 pycom11g02720 pycom11g02730 pycom11g02750 pycom11g02760 pycom11g02770 pycom11g03690 pycom13g25120 pycom13g25130 pycom13g25140 pycom13g25170 pycom13g25180 pycom13g25190 pycom13g25210
rosa_chinensis RchiOBHm_Chr1g0315001 RchiOBHm_Chr1g0315411 RchiOBHm_Chr1g0317951 RchiOBHm_Chr1g0319741 RchiOBHm_Chr1g0319841 RchiOBHm_Chr1g0319911 RchiOBHm_Chr1g0319991 RchiOBHm_Chr1g0320001 RchiOBHm_Chr1g0320021 RchiOBHm_Chr1g0320081 RchiOBHm_Chr1g0320111 RchiOBHm_Chr1g0320131 RchiOBHm_Chr1g0320161 RchiOBHm_Chr1g0320171 RchiOBHm_Chr1g0320241 RchiOBHm_Chr1g0320281 RchiOBHm_Chr1g0320411 RchiOBHm_Chr1g0320461 RchiOBHm_Chr1g0320551 RchiOBHm_Chr1g0320581 RchiOBHm_Chr1g0320661 RchiOBHm_Chr1g0320891 RchiOBHm_Chr1g0320971 RchiOBHm_Chr1g0321021 RchiOBHm_Chr1g0321031 RchiOBHm_Chr1g0321091 RchiOBHm_Chr1g0321351 RchiOBHm_Chr1g0321481 RchiOBHm_Chr1g0321491 RchiOBHm_Chr1g0327521 RchiOBHm_Chr1g0328061 RchiOBHm_Chr1g0334991 RchiOBHm_Chr1g0373781 RchiOBHm_Chr1g0373891 RchiOBHm_Chr1g0374841 RchiOBHm_Chr2g0131111 RchiOBHm_Chr2g0131121 RchiOBHm_Chr4g0408901 RchiOBHm_Chr5g0041691 RchiOBHm_Chr7g0237021
rosa_laevigata RLG00000019168 RLG00000030456 RLG00000030460 RLG00000030571
rosa_multiflora Rmu_co7963468.1_g000001 Rmu_co7991248.1_g000001 Rmu_co8195256.1_g000001 Rmu_co8312199.1_g000001 Rmu_co8349215.1_g000001 Rmu_co8351041.1_g000001 Rmu_co8422719.1_g000001 Rmu_co8450711.1_g000001 Rmu_co8465555.1_g000001 Rmu_co8489965.1_g000001 Rmu_sc0000087.1_g000014 Rmu_sc0000272.1_g000015 Rmu_sc0000724.1_g000006 Rmu_sc0000724.1_g000021 Rmu_sc0000724.1_g000022 Rmu_sc0000861.1_g000024 Rmu_sc0001049.1_g000006 Rmu_sc0001049.1_g000007 Rmu_sc0001512.1_g000001 Rmu_sc0002022.1_g000004 Rmu_sc0002063.1_g000011 Rmu_sc0002131.1_g000024 Rmu_sc0002337.1_g000012 Rmu_sc0002341.1_g000005 Rmu_sc0002539.1_g000117 Rmu_sc0002745.1_g000005 Rmu_sc0002745.1_g000006 Rmu_sc0003145.1_g000002 Rmu_sc0003199.1_g000007 Rmu_sc0003270.1_g000039 Rmu_sc0003270.1_g000040 Rmu_sc0003423.1_g000001 Rmu_sc0003423.1_g000002 Rmu_sc0003629.1_g000067 Rmu_sc0004039.1_g000002 Rmu_sc0004555.1_g000001 Rmu_sc0004555.1_g000005 Rmu_sc0004555.1_g000006 Rmu_sc0004947.1_g000025 Rmu_sc0004947.1_g000026 Rmu_sc0005255.1_g000025 Rmu_sc0007977.1_g000016 Rmu_sc0008752.1_g000005 Rmu_sc0009236.1_g000004 Rmu_sc0009236.1_g000008 Rmu_sc0009236.1_g000009 Rmu_sc0009236.1_g000010 Rmu_sc0011424.1_g000036 Rmu_sc0013413.1_g000001 Rmu_sc0013735.1_g000002 Rmu_sc0015304.1_g000002 Rmu_sc0015304.1_g000003 Rmu_sc0015585.1_g000001 Rmu_sc0018410.1_g000001 Rmu_sc0022723.1_g000001 Rmu_sc0022723.1_g000002 Rmu_sc0022724.1_g000001 Rmu_sc0023430.1_g000001 Rmu_sc0026053.1_g000001 Rmu_sc0026429.1_g000002 Rmu_sc0026647.1_g000001 Rmu_sc0031359.1_g000001 Rmu_ssc0000042.1_g000040 Rmu_ssc0000081.1_g000001 Rmu_ssc0000300.1_g000011
rosa_roxburghii Rroxscaffold_160G00433620 Rroxscaffold_160G00433990 Rroxscaffold_1G00038820 Rroxscaffold_2G00113190 Rroxscaffold_4G00283240 Rroxscaffold_4G00283930 Rroxscaffold_4G00284010 Rroxscaffold_4G00322600 Rroxscaffold_4G00327710 Rroxscaffold_4G00328100 Rroxscaffold_4G00328130 Rroxscaffold_4G00331590 Rroxscaffold_5G00353280
rosa_rugosa Rorug01G0004200 Rorug01G0018800 Rorug01G0018900 Rorug01G0029900 Rorug01G0030000 Rorug01G0030000 Rorug01G0030000 Rorug01G0030200 Rorug01G0030300 Rorug01G0030800 Rorug01G0032400 Rorug01G0032900 Rorug01G0055800 Rorug01G0067600 Rorug01G0067700 Rorug01G0067800 Rorug01G0067900 Rorug01G0068000 Rorug01G0379500 Rorug01G0379600 Rorug01G0379600 Rorug01G0385200 Rorug01G0385300 Rorug02G0295100 Rorug04G0088500 Rorug04G0088600 Rorug05G0194900 Rorug07G0301400
rosa_samantha Rh1AG014800 Rh1AG015200 Rh1AG030500 Rh1AG041800 Rh1AG042300 Rh1AG042700 Rh1AG042800 Rh1AG042900 Rh1AG045000 Rh1AG085100 Rh1AG085200 Rh1AG388600 Rh1AG396700 Rh1AG396900 Rh1BG007300 Rh1BG039200 Rh1BG039600 Rh1BG042800 Rh1BG067300 Rh1BG109700 Rh1BG109900 Rh1BG354000 Rh1CG043800 Rh1CG044400 Rh1DG008600 Rh1DG022900 Rh1DG023400 Rh1DG023600 Rh1DG023900 Rh1DG024100 Rh1DG024400 Rh1DG024500 Rh1DG025500 Rh1DG025700 Rh1DG026500 Rh1DG026800 Rh1DG038900 Rh1DG048800 Rh1DG049300 Rh1DG051700 Rh1DG052000 Rh1DG146200 Rh1DG383500 Rh2BG354900 Rh2CG333600 Rh4BG149600 Rh4BG149700 Rh4CG160600
rosa_wichuraiana Rw0G001100 Rw0G001130 Rw0G001180 Rw0G012580 Rw1G003480 Rw1G003540 Rw1G003600 Rw1G003640 Rw1G003670 Rw1G003750 Rw1G003940 Rw1G006650 Rw1G034550 Rw1G034560 Rw1G034650 Rw1G034660 Rw1G035170 Rw1G035190 Rw1G037060 Rw2G028210 Rw4G012540 Rw5G026370 Rw7G037900

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 34
Acc36I ACCTGC 2 cut(s) 34, 48
AccB7I CCANNNNNTGG 1 cut(s) 258
AciI CCGC 1 cut(s) 445
AcsI RAATTY 2 cut(s) 286, 300
AcuI CTGAAG 2 cut(s) 492, 522
AdeI CACNNNGTG 1 cut(s) 319
AfaI GTAC 1 cut(s) 187
AfiI CCNNNNNNNGG 1 cut(s) 258
AgsI TTSAA 3 cut(s) 115, 277, 344
AjnI CCWGG 1 cut(s) 251
AluBI AGCT 3 cut(s) 227, 325, 470
AluI AGCT 3 cut(s) 227, 325, 470
Alw26I GTCTC 1 cut(s) 12
Ama87I CYCGRG 1 cut(s) 157
AoxI GGCC 3 cut(s) 135, 346, 583
ApeKI GCWGC 3 cut(s) 17, 442, 534
ApoI RAATTY 2 cut(s) 286, 300
AspS9I GGNCC 1 cut(s) 347
AsuHPI GGTGA 1 cut(s) 295
AvaI CYCGRG 1 cut(s) 157
BbvI GCAGC 3 cut(s) 4, 454, 546
BciT130I CCWGG 1 cut(s) 253
BclI TGATCA 1 cut(s) 291
BcoDI GTCTC 1 cut(s) 12
BfaI CTAG 3 cut(s) 68, 128, 317
BfmI CTRYAG 1 cut(s) 41
BfuAI ACCTGC 2 cut(s) 34, 48
BglII AGATCT 1 cut(s) 612
BisI GCNGC 3 cut(s) 18, 443, 535
BlsI GCNGC 3 cut(s) 19, 444, 536
Bme1390I CCNGG 1 cut(s) 253
BmeT110I CYCGRG 1 cut(s) 157
BmgT120I GGNCC 1 cut(s) 347
BmiI GGNNCC 1 cut(s) 389
BmrFI CCNGG 1 cut(s) 253
BpuEI CTTGAG 1 cut(s) 127
BsaBI GATNNNNATC 1 cut(s) 555
Bsc4I CCNNNNNNNGG 1 cut(s) 258
Bse1I ACTGG 1 cut(s) 440
Bse3DI GCAATG 2 cut(s) 263, 544
Bse8I GATNNNNATC 1 cut(s) 555
BseBI CCWGG 1 cut(s) 253
BseGI GGATG 1 cut(s) 556
BseJI GATNNNNATC 1 cut(s) 555
BseLI CCNNNNNNNGG 1 cut(s) 258
BseMI GCAATG 2 cut(s) 263, 544
BseMII CTCAG 1 cut(s) 342
BseNI ACTGG 1 cut(s) 440
BseXI GCAGC 3 cut(s) 4, 454, 546
BsgI GTGCAG 1 cut(s) 68
BshFI GGCC 3 cut(s) 137, 348, 585
BsiHKCI CYCGRG 1 cut(s) 157
BslFI GGGAC 2 cut(s) 214, 536
BslI CCNNNNNNNGG 1 cut(s) 258
BsmAI GTCTC 1 cut(s) 12
BsmFI GGGAC 2 cut(s) 214, 536
BsnI GGCC 3 cut(s) 137, 348, 585
BsoBI CYCGRG 1 cut(s) 157
Bsp143I GATC 5 cut(s) 51, 291, 394, 421, 612
BspACI CCGC 1 cut(s) 445
BspANI GGCC 3 cut(s) 137, 348, 585
BspCNI CTCAG 1 cut(s) 343
BspHI TCATGA 1 cut(s) 490
BspLI GGNNCC 1 cut(s) 389
BspMAI CTGCAG 1 cut(s) 45
BspMI ACCTGC 2 cut(s) 34, 48
BsrDI GCAATG 2 cut(s) 263, 544
BsrI ACTGG 1 cut(s) 440
BssMI GATC 5 cut(s) 51, 291, 394, 421, 612
Bst2UI CCWGG 1 cut(s) 253
Bst4CI ACNGT 2 cut(s) 190, 223
Bst6I CTCTTC 1 cut(s) 210
BstC8I GCNNGC 2 cut(s) 28, 359
BstDEI CTNAG 2 cut(s) 351, 621
BstF5I GGATG 1 cut(s) 556
BstKTI GATC 5 cut(s) 54, 294, 397, 424, 615
BstMAI GTCTC 1 cut(s) 12
BstMBI GATC 5 cut(s) 51, 291, 394, 421, 612
BstMWI GCNNNNNNNGC 3 cut(s) 23, 345, 354
BstNI CCWGG 1 cut(s) 253
BstSCI CCNGG 1 cut(s) 251
BstSFI CTRYAG 1 cut(s) 41
BstV1I GCAGC 3 cut(s) 4, 454, 546
BstX2I RGATCY 1 cut(s) 612
BstYI RGATCY 1 cut(s) 612
BsuRI GGCC 3 cut(s) 137, 348, 585
BtsCI GGATG 1 cut(s) 556
BtsIMutI CAGTG 1 cut(s) 301
BveI ACCTGC 2 cut(s) 34, 48
Cac8I GCNNGC 2 cut(s) 28, 359
CciI TCATGA 1 cut(s) 490
Cfr13I GGNCC 1 cut(s) 347
Csp6I GTAC 1 cut(s) 186
CviAII CATG 1 cut(s) 491
CviQI GTAC 1 cut(s) 186
DdeI CTNAG 2 cut(s) 351, 621
DpnI GATC 5 cut(s) 53, 293, 396, 423, 614
DpnII GATC 5 cut(s) 51, 291, 394, 421, 612
DraIII CACNNNGTG 1 cut(s) 319
Eam1104I CTCTTC 1 cut(s) 210
EarI CTCTTC 1 cut(s) 210
Eco57I CTGAAG 2 cut(s) 492, 522
Eco88I CYCGRG 1 cut(s) 157
EcoO109I RGGNCCY 1 cut(s) 347
EcoRI GAATTC 1 cut(s) 300
EcoRII CCWGG 1 cut(s) 251
FaeI CATG 1 cut(s) 494
FaiI YATR 8 cut(s) 24, 33, 120, 369, 375, 492, 527, 561
FaqI GGGAC 2 cut(s) 214, 536
FatI CATG 1 cut(s) 490
FbaI TGATCA 1 cut(s) 291
Fnu4HI GCNGC 3 cut(s) 18, 443, 535
FokI GGATG 1 cut(s) 563
Fsp4HI GCNGC 3 cut(s) 18, 443, 535
FspBI CTAG 3 cut(s) 68, 128, 317
GluI GCNGC 3 cut(s) 18, 443, 535
HaeIII GGCC 3 cut(s) 137, 348, 585
Hin1II CATG 1 cut(s) 494
HindIII AAGCTT 1 cut(s) 323
HinfI GANTC 2 cut(s) 202, 556
HphI GGTGA 1 cut(s) 295
Hpy188I TCNGA 5 cut(s) 56, 210, 464, 502, 607
Hpy188III TCNNGA 3 cut(s) 159, 491, 548
HpyAV CCTTC 5 cut(s) 127, 167, 338, 467, 488
HpyCH4III ACNGT 2 cut(s) 190, 223
HpyCH4V TGCA 4 cut(s) 26, 43, 49, 575
HpyF10VI GCNNNNNNNGC 3 cut(s) 23, 345, 354
HpyF3I CTNAG 2 cut(s) 351, 621
Hsp92II CATG 1 cut(s) 494
Ksp22I TGATCA 1 cut(s) 291
Kzo9I GATC 5 cut(s) 51, 291, 394, 421, 612
LmnI GCTCC 1 cut(s) 387
Lsp1109I GCAGC 3 cut(s) 4, 454, 546
MaeI CTAG 3 cut(s) 68, 128, 317
MalI GATC 5 cut(s) 53, 293, 396, 423, 614
MboI GATC 5 cut(s) 51, 291, 394, 421, 612
MboII GAAGA 4 cut(s) 197, 265, 479, 536
MflI RGATCY 1 cut(s) 612
MluCI AATT 4 cut(s) 63, 286, 300, 398
MlyI GAGTC 1 cut(s) 196
MmeI TCCRAC 1 cut(s) 442
MnlI CCTC 4 cut(s) 166, 173, 274, 401
MseI TTAA 4 cut(s) 150, 195, 231, 432
MspA1I CMGCKG 2 cut(s) 445, 470
MspR9I CCNGG 1 cut(s) 253
MvaI CCWGG 1 cut(s) 253
MwoI GCNNNNNNNGC 3 cut(s) 23, 345, 354
NdeII GATC 5 cut(s) 51, 291, 394, 421, 612
NlaIII CATG 1 cut(s) 494
NlaIV GGNNCC 1 cut(s) 389
PaeR7I CTCGAG 1 cut(s) 157
PagI TCATGA 1 cut(s) 490
PaqCI CACCTGC 1 cut(s) 34
PfeI GAWTC 1 cut(s) 556
PflMI CCANNNNNTGG 1 cut(s) 258
PkrI GCNGC 3 cut(s) 19, 444, 536
PleI GAGTC 1 cut(s) 196
PpsI GAGTC 1 cut(s) 196
Psp6I CCWGG 1 cut(s) 251
PspGI CCWGG 1 cut(s) 251
PspN4I GGNNCC 1 cut(s) 389
PspPI GGNCC 1 cut(s) 347
PstI CTGCAG 1 cut(s) 45
PsuI RGATCY 1 cut(s) 612
PvuII CAGCTG 1 cut(s) 470
RsaI GTAC 1 cut(s) 187
RsaNI GTAC 1 cut(s) 186
SaqAI TTAA 4 cut(s) 150, 195, 231, 432
SatI GCNGC 3 cut(s) 18, 443, 535
Sau3AI GATC 5 cut(s) 51, 291, 394, 421, 612
Sau96I GGNCC 1 cut(s) 347
SbfI CCTGCAGG 1 cut(s) 45
SchI GAGTC 1 cut(s) 196
ScrFI CCNGG 1 cut(s) 253
SdaI CCTGCAGG 1 cut(s) 45
SetI ASST 9 cut(s) 42, 48, 158, 184, 229, 285, 318, 327, 472
SfcI CTRYAG 1 cut(s) 41
Sfr274I CTCGAG 1 cut(s) 157
SlaI CTCGAG 1 cut(s) 157
SmlI CTYRAG 2 cut(s) 106, 157
SmoI CTYRAG 2 cut(s) 106, 157
Sse8387I CCTGCAGG 1 cut(s) 45
Sse9I AATT 4 cut(s) 63, 286, 300, 398
SsiI CCGC 1 cut(s) 445
SspMI CTAG 3 cut(s) 68, 128, 317
StyD4I CCNGG 1 cut(s) 251
TaaI ACNGT 2 cut(s) 190, 223
TaqI TCGA 3 cut(s) 158, 393, 408
TasI AATT 4 cut(s) 63, 286, 300, 398
TfiI GAWTC 1 cut(s) 556
Tru1I TTAA 4 cut(s) 150, 195, 231, 432
Tru9I TTAA 4 cut(s) 150, 195, 231, 432
TscAI CASTG 1 cut(s) 301
TseI GCWGC 3 cut(s) 17, 442, 534
TspDTI ATGAA 4 cut(s) 135, 384, 479, 507
TspRI CASTG 1 cut(s) 301
Van91I CCANNNNNTGG 1 cut(s) 258
XapI RAATTY 2 cut(s) 286, 300
XhoI CTCGAG 1 cut(s) 157
XspI CTAG 3 cut(s) 68, 128, 317
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.