Rmu_sc0004555.1_g000005

disease resistance

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0004555.1
OG0000070
Physical Location & Seq
Forward (+)
19238 .. 20389
1152 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0004555.1_g000005.1.cds

Sequence Viewer

Length: 1152 bp
atggcggtgggagagatctttcttgcggcattccttcagttgctgctggagaggttaactcctcgggagatcctgggctactttggaagcttgggaggagctggcaaaaagctgcagaaatggagagagacactttccgcagttgcagccgtgctttacgatgcggaggagaagcagctgactaacaaggcagtggatttgtggctgaatgacctcaaacacttggcctctgatatggacgatctactcgacaccttttccactgagatgttagcacgaaagcagctcaagcttcaccaaactggcacaagcaaggtacgaggcttctttaccaaagttcctcacaaagttaagttcaatttcaatatgaactctgaagtagacgagattgctaatcggttgcaagacatagttgaccggaaagagaaactcggtttgaaatatattgagcatacctctacttcaacatcgtcatcgcacaggacaccaagttcatatgtgttggatggacctgtggttgggagagatgaagacacaagaaagattgtggaattgttgtccagaggtgttgatccttcttctcccacaaattatcaagttgttgccattgttggtatgggtggactcggcaagacaacgcttgcgggacgagtcttcaatgatgtagctacagtggaacagtttaatctcaagatctgggtttcagtatccgataactttgatcttcaaacggtgacgagagctatttttaaggaagttacatctcggccatgtgatatggatgagttcagtcgacttcaagataatctgagcaaggagatcgatggtaaaaggtttttgattgttttagatgatgtgtggagcacatgtgattatgattcatggacaaaactgcaagctcccctccgtggcggagccaagggaagtaatgtaatggtgacaacacgtgatgaaaaagtagctgcatttatgggagccccagccggtgatgtttatcatttaaagactctatcagaagaagattgtttgcaagtatttgagcagcatgttagcaatgacttgcttaagaagaaaattgtaacaaactgcaatggattgccattggctgcaaaaactcttggtggctttttacgtcgtaacaaaactgactag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
NB-ARC

Protein Analysis

383

Amino Acids

42.73

Weight (kDa)

6.68

Isoelectric Point (pI)

31.4

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000070)

Species Orthologous Gene IDs
fragaria_vesca FvH4_7g00360 FvH4_7g00850 FvH4_7g02400 FvH4_7g02430 FvH4_7g02450 FvH4_7g25671 FvH4_7g25680 FvH4_7g25683 FvH4_7g26980 FvH4_7g27330 FvH4_7g27355 FvH4_7g27610 FvH4_7g27642 FvH4_7g27890 FvH4_7g27891 FvH4_7g27891 FvH4_7g27891 FvH4_7g28110 FvH4_7g28390
malus_domestica MD00G1070800.v1.1 MD00G1168000.v1.1 MD00G1168300.v1.1 MD00G1168700.v1.1 MD02G1293100.v1.1 MD02G1293200.v1.1 MD02G1314300.v1.1 MD03G1009000.v1.1 MD03G1009400.v1.1 MD03G1042300.v1.1 MD03G1042400.v1.1 MD07G1033600.v1.1 MD07G1033700.v1.1 MD07G1033900.v1.1 MD11G1011400.v1.1 MD11G1011700.v1.1 MD11G1029800.v1.1 MD11G1029900.v1.1 MD11G1030300.v1.1 MD11G1030400.v1.1 MD11G1030500.v1.1 MD11G1031300.v1.1 MD11G1031600.v1.1 MD11G1032000.v1.1 MD11G1033200.v1.1 MD11G1033600.v1.1 MD11G1033800.v1.1 MD11G1033900.v1.1 MD11G1034100.v1.1 MD11G1034400.v1.1 MD11G1040600.v1.1 MD11G1041100.v1.1 MD11G1043100.v1.1 MD11G1043500.v1.1 MD11G1044500.v1.1 MD11G1045100.v1.1 MD11G1045600.v1.1
prunus_persica Prupe.2G022400_v2.0.a1 Prupe.2G022400_v2.0.a1 Prupe.2G022400_v2.0.a1 Prupe.2G022500_v2.0.a1 Prupe.2G022500_v2.0.a1 Prupe.2G022900_v2.0.a1 Prupe.2G023500_v2.0.a1 Prupe.2G023500_v2.0.a1 Prupe.2G023500_v2.0.a1 Prupe.2G023500_v2.0.a1 Prupe.2G023500_v2.0.a1 Prupe.2G023500_v2.0.a1 Prupe.2G023600_v2.0.a1 Prupe.2G028000_v2.0.a1 Prupe.2G030200_v2.0.a1 Prupe.2G067600_v2.0.a1 Prupe.8G117900_v2.0.a1
pyrus_communis pycom02g26350 pycom03g03270 pycom07g02370 pycom11g00750 pycom11g00790 pycom11g02340 pycom11g02370 pycom11g02380 pycom11g02390 pycom11g02410 pycom11g02460 pycom11g02470 pycom11g02500 pycom11g02510 pycom11g02520 pycom11g02530 pycom11g02580 pycom11g02590 pycom11g02680 pycom11g02710 pycom11g02720 pycom11g02730 pycom11g02750 pycom11g02760 pycom11g02770 pycom11g03690 pycom13g25120 pycom13g25130 pycom13g25140 pycom13g25170 pycom13g25180 pycom13g25190 pycom13g25210
rosa_chinensis RchiOBHm_Chr1g0315001 RchiOBHm_Chr1g0315411 RchiOBHm_Chr1g0317951 RchiOBHm_Chr1g0319741 RchiOBHm_Chr1g0319841 RchiOBHm_Chr1g0319911 RchiOBHm_Chr1g0319991 RchiOBHm_Chr1g0320001 RchiOBHm_Chr1g0320021 RchiOBHm_Chr1g0320081 RchiOBHm_Chr1g0320111 RchiOBHm_Chr1g0320131 RchiOBHm_Chr1g0320161 RchiOBHm_Chr1g0320171 RchiOBHm_Chr1g0320241 RchiOBHm_Chr1g0320281 RchiOBHm_Chr1g0320411 RchiOBHm_Chr1g0320461 RchiOBHm_Chr1g0320551 RchiOBHm_Chr1g0320581 RchiOBHm_Chr1g0320661 RchiOBHm_Chr1g0320891 RchiOBHm_Chr1g0320971 RchiOBHm_Chr1g0321021 RchiOBHm_Chr1g0321031 RchiOBHm_Chr1g0321091 RchiOBHm_Chr1g0321351 RchiOBHm_Chr1g0321481 RchiOBHm_Chr1g0321491 RchiOBHm_Chr1g0327521 RchiOBHm_Chr1g0328061 RchiOBHm_Chr1g0334991 RchiOBHm_Chr1g0373781 RchiOBHm_Chr1g0373891 RchiOBHm_Chr1g0374841 RchiOBHm_Chr2g0131111 RchiOBHm_Chr2g0131121 RchiOBHm_Chr4g0408901 RchiOBHm_Chr5g0041691 RchiOBHm_Chr7g0237021
rosa_laevigata RLG00000019168 RLG00000030456 RLG00000030460 RLG00000030571
rosa_multiflora Rmu_co7963468.1_g000001 Rmu_co7991248.1_g000001 Rmu_co8195256.1_g000001 Rmu_co8312199.1_g000001 Rmu_co8349215.1_g000001 Rmu_co8351041.1_g000001 Rmu_co8422719.1_g000001 Rmu_co8450711.1_g000001 Rmu_co8465555.1_g000001 Rmu_co8489965.1_g000001 Rmu_sc0000087.1_g000014 Rmu_sc0000272.1_g000015 Rmu_sc0000724.1_g000006 Rmu_sc0000724.1_g000021 Rmu_sc0000724.1_g000022 Rmu_sc0000861.1_g000024 Rmu_sc0001049.1_g000006 Rmu_sc0001049.1_g000007 Rmu_sc0001512.1_g000001 Rmu_sc0002022.1_g000004 Rmu_sc0002063.1_g000011 Rmu_sc0002131.1_g000024 Rmu_sc0002337.1_g000012 Rmu_sc0002341.1_g000005 Rmu_sc0002539.1_g000117 Rmu_sc0002745.1_g000005 Rmu_sc0002745.1_g000006 Rmu_sc0003145.1_g000002 Rmu_sc0003199.1_g000007 Rmu_sc0003270.1_g000039 Rmu_sc0003270.1_g000040 Rmu_sc0003423.1_g000001 Rmu_sc0003423.1_g000002 Rmu_sc0003629.1_g000067 Rmu_sc0004039.1_g000002 Rmu_sc0004555.1_g000001 Rmu_sc0004555.1_g000005 Rmu_sc0004555.1_g000006 Rmu_sc0004947.1_g000025 Rmu_sc0004947.1_g000026 Rmu_sc0005255.1_g000025 Rmu_sc0007977.1_g000016 Rmu_sc0008752.1_g000005 Rmu_sc0009236.1_g000004 Rmu_sc0009236.1_g000008 Rmu_sc0009236.1_g000009 Rmu_sc0009236.1_g000010 Rmu_sc0011424.1_g000036 Rmu_sc0013413.1_g000001 Rmu_sc0013735.1_g000002 Rmu_sc0015304.1_g000002 Rmu_sc0015304.1_g000003 Rmu_sc0015585.1_g000001 Rmu_sc0018410.1_g000001 Rmu_sc0022723.1_g000001 Rmu_sc0022723.1_g000002 Rmu_sc0022724.1_g000001 Rmu_sc0023430.1_g000001 Rmu_sc0026053.1_g000001 Rmu_sc0026429.1_g000002 Rmu_sc0026647.1_g000001 Rmu_sc0031359.1_g000001 Rmu_ssc0000042.1_g000040 Rmu_ssc0000081.1_g000001 Rmu_ssc0000300.1_g000011
rosa_roxburghii Rroxscaffold_160G00433620 Rroxscaffold_160G00433990 Rroxscaffold_1G00038820 Rroxscaffold_2G00113190 Rroxscaffold_4G00283240 Rroxscaffold_4G00283930 Rroxscaffold_4G00284010 Rroxscaffold_4G00322600 Rroxscaffold_4G00327710 Rroxscaffold_4G00328100 Rroxscaffold_4G00328130 Rroxscaffold_4G00331590 Rroxscaffold_5G00353280
rosa_rugosa Rorug01G0004200 Rorug01G0018800 Rorug01G0018900 Rorug01G0029900 Rorug01G0030000 Rorug01G0030000 Rorug01G0030000 Rorug01G0030200 Rorug01G0030300 Rorug01G0030800 Rorug01G0032400 Rorug01G0032900 Rorug01G0055800 Rorug01G0067600 Rorug01G0067700 Rorug01G0067800 Rorug01G0067900 Rorug01G0068000 Rorug01G0379500 Rorug01G0379600 Rorug01G0379600 Rorug01G0385200 Rorug01G0385300 Rorug02G0295100 Rorug04G0088500 Rorug04G0088600 Rorug05G0194900 Rorug07G0301400
rosa_samantha Rh1AG014800 Rh1AG015200 Rh1AG030500 Rh1AG041800 Rh1AG042300 Rh1AG042700 Rh1AG042800 Rh1AG042900 Rh1AG045000 Rh1AG085100 Rh1AG085200 Rh1AG388600 Rh1AG396700 Rh1AG396900 Rh1BG007300 Rh1BG039200 Rh1BG039600 Rh1BG042800 Rh1BG067300 Rh1BG109700 Rh1BG109900 Rh1BG354000 Rh1CG043800 Rh1CG044400 Rh1DG008600 Rh1DG022900 Rh1DG023400 Rh1DG023600 Rh1DG023900 Rh1DG024100 Rh1DG024400 Rh1DG024500 Rh1DG025500 Rh1DG025700 Rh1DG026500 Rh1DG026800 Rh1DG038900 Rh1DG048800 Rh1DG049300 Rh1DG051700 Rh1DG052000 Rh1DG146200 Rh1DG383500 Rh2BG354900 Rh2CG333600 Rh4BG149600 Rh4BG149700 Rh4CG160600
rosa_wichuraiana Rw0G001100 Rw0G001130 Rw0G001180 Rw0G012580 Rw1G003480 Rw1G003540 Rw1G003600 Rw1G003640 Rw1G003670 Rw1G003750 Rw1G003940 Rw1G006650 Rw1G034550 Rw1G034560 Rw1G034650 Rw1G034660 Rw1G035170 Rw1G035190 Rw1G037060 Rw2G028210 Rw4G012540 Rw5G026370 Rw7G037900

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 2 cut(s) 381, 793
AciI CCGC 6 cut(s) 5, 26, 138, 164, 644, 912
AclWI GGATC 2 cut(s) 64, 566
AcoI YGGCCR 1 cut(s) 767
AcuI CTGAAG 2 cut(s) 20, 396
AcvI CACGTG 1 cut(s) 947
AfaI GTAC 1 cut(s) 318
AfiI CCNNNNNNNGG 2 cut(s) 518, 908
AflII CTTAAG 1 cut(s) 1064
AflIII ACRYGT 2 cut(s) 866, 944
AgsI TTSAA 7 cut(s) 358, 364, 439, 465, 658, 728, 800
AjnI CCWGG 1 cut(s) 72
AloI GAACNNNNNNTCC 2 cut(s) 475, 507
Alw21I GWGCWC 1 cut(s) 866
Alw26I GTCTC 1 cut(s) 122
AlwI GGATC 2 cut(s) 64, 566
AlwNI CAGNNNCTG 1 cut(s) 43
Ama87I CYCGRG 1 cut(s) 63
AoxI GGCC 2 cut(s) 225, 767
ApeKI GCWGC 8 cut(s) 43, 112, 146, 175, 283, 962, 1042, 1106
AspS9I GGNCC 1 cut(s) 509
AsuHPI GGTGA 4 cut(s) 287, 745, 949, 998
AvaI CYCGRG 1 cut(s) 63
AvaII GGWCC 1 cut(s) 509
BanII GRGCYC 1 cut(s) 979
BbrPI CACGTG 1 cut(s) 947
BbsI GAAGAC 2 cut(s) 537, 646
Bbv12I GWGCWC 1 cut(s) 866
BbvI GCAGC 8 cut(s) 30, 99, 158, 187, 295, 949, 1054, 1093
BccI CCATC 2 cut(s) 500, 818
BceAI ACGGC 1 cut(s) 134
BcgI CGANNNNNNTGC 2 cut(s) 802, 836
BciT130I CCWGG 1 cut(s) 74
BciVI GTATCC 1 cut(s) 718
BcoDI GTCTC 1 cut(s) 122
BfaI CTAG 1 cut(s) 1150
BfmI CTRYAG 2 cut(s) 113, 669
BfrI CTTAAG 1 cut(s) 1064
BfuI GTATCC 1 cut(s) 718
BglII AGATCT 2 cut(s) 15, 693
BisI GCNGC 9 cut(s) 27, 44, 113, 147, 176, 284, 963, 1043, 1107
BlsI GCNGC 9 cut(s) 28, 45, 114, 148, 177, 285, 964, 1044, 1108
Bme1390I CCNGG 1 cut(s) 74
Bme18I GGWCC 1 cut(s) 509
BmeT110I CYCGRG 1 cut(s) 63
BmgT120I GGNCC 1 cut(s) 509
BmiI GGNNCC 2 cut(s) 916, 976
BmrFI CCNGG 1 cut(s) 74
BmsI GCATC 1 cut(s) 151
BpiI GAAGAC 2 cut(s) 537, 646
BplI GAGNNNNNCTC 4 cut(s) 43, 75, 440, 472
BpmI CTGGAG 1 cut(s) 68
BpuEI CTTGAG 2 cut(s) 272, 674
Bsa29I ATCGAT 1 cut(s) 822
BsaAI YACGTR 1 cut(s) 947
BsaBI GATNNNNATC 1 cut(s) 993
BsaJI CCNNGG 4 cut(s) 62, 73, 907, 918
BsaWI WCCGGW 1 cut(s) 417
BsaXI ACNNNNNCTCC 2 cut(s) 853, 883
Bsc4I CCNNNNNNNGG 2 cut(s) 518, 908
Bse118I RCCGGY 1 cut(s) 983
Bse1I ACTGG 1 cut(s) 307
Bse3DI GCAATG 2 cut(s) 1060, 1096
Bse8I GATNNNNATC 1 cut(s) 993
BseBI CCWGG 1 cut(s) 74
BseCI ATCGAT 1 cut(s) 822
BseDI CCNNGG 4 cut(s) 62, 73, 907, 918
BseGI GGATG 2 cut(s) 511, 787
BseJI GATNNNNATC 1 cut(s) 993
BseLI CCNNNNNNNGG 2 cut(s) 518, 908
BseMI GCAATG 2 cut(s) 1060, 1096
BseMII CTCAG 2 cut(s) 255, 800
BseNI ACTGG 1 cut(s) 307
BseRI GAGGAG 3 cut(s) 51, 111, 182
BseXI GCAGC 8 cut(s) 30, 99, 158, 187, 295, 949, 1054, 1093
BseYI CCCAGC 1 cut(s) 979
BshFI GGCC 2 cut(s) 227, 769
BshVI ATCGAT 1 cut(s) 822
BsiHKAI GWGCWC 1 cut(s) 866
BsiHKCI CYCGRG 1 cut(s) 63
BsiSI CCGG 2 cut(s) 418, 984
BslFI GGGAC 1 cut(s) 660
BslI CCNNNNNNNGG 2 cut(s) 518, 908
BsmAI GTCTC 1 cut(s) 122
BsmFI GGGAC 1 cut(s) 660
BsmI GAATGC 1 cut(s) 29
BsnI GGCC 2 cut(s) 227, 769
BsoBI CYCGRG 1 cut(s) 63
Bsp1286I GDGCHC 2 cut(s) 866, 979
Bsp143I GATC 7 cut(s) 15, 69, 241, 571, 693, 721, 819
BspACI CCGC 6 cut(s) 5, 26, 138, 164, 644, 912
BspANI GGCC 2 cut(s) 227, 769
BspCNI CTCAG 2 cut(s) 256, 801
BspDI ATCGAT 1 cut(s) 822
BspLI GGNNCC 2 cut(s) 916, 976
BspMAI CTGCAG 1 cut(s) 117
BspPI GGATC 2 cut(s) 64, 566
BspTI CTTAAG 1 cut(s) 1064
BsrDI GCAATG 2 cut(s) 1060, 1096
BsrFI RCCGGY 1 cut(s) 983
BsrI ACTGG 1 cut(s) 307
BssAI RCCGGY 1 cut(s) 983
BssECI CCNNGG 4 cut(s) 62, 73, 907, 918
BssMI GATC 7 cut(s) 15, 69, 241, 571, 693, 721, 819
BssT1I CCWWGG 1 cut(s) 918
Bst2UI CCWGG 1 cut(s) 74
Bst4CI ACNGT 3 cut(s) 673, 681, 733
BstAFI CTTAAG 1 cut(s) 1064
BstBAI YACGTR 1 cut(s) 947
BstC8I GCNNGC 3 cut(s) 103, 642, 897
BstDEI CTNAG 2 cut(s) 264, 809
BstDSI CCRYGG 1 cut(s) 907
BstF5I GGATG 2 cut(s) 511, 787
BstKTI GATC 7 cut(s) 18, 72, 244, 574, 696, 724, 822
BstMAI GTCTC 1 cut(s) 122
BstMBI GATC 7 cut(s) 15, 69, 241, 571, 693, 721, 819
BstMWI GCNNNNNNNGC 2 cut(s) 146, 289
BstNI CCWGG 1 cut(s) 74
BstNSI RCATGY 2 cut(s) 870, 1049
BstSCI CCNGG 1 cut(s) 72
BstSFI CTRYAG 2 cut(s) 113, 669
BstV1I GCAGC 8 cut(s) 30, 99, 158, 187, 295, 949, 1054, 1093
BstV2I GAAGAC 2 cut(s) 537, 646
BstX2I RGATCY 3 cut(s) 15, 69, 693
BstYI RGATCY 3 cut(s) 15, 69, 693
Bsu15I ATCGAT 1 cut(s) 822
BsuI GTATCC 1 cut(s) 718
BsuRI GGCC 2 cut(s) 227, 769
BsuTUI ATCGAT 1 cut(s) 822
BtgI CCRYGG 1 cut(s) 907
BtgZI GCGATG 1 cut(s) 459
BtsCI GGATG 2 cut(s) 511, 787
BtsI GCAGTG 1 cut(s) 198
BtsIMutI CAGTG 3 cut(s) 198, 261, 678
Cac8I GCNNGC 3 cut(s) 103, 642, 897
CaiI CAGNNNCTG 1 cut(s) 43
Cfr10I RCCGGY 1 cut(s) 983
Cfr13I GGNCC 1 cut(s) 509
ClaI ATCGAT 1 cut(s) 822
Csp6I GTAC 1 cut(s) 317
CviAII CATG 4 cut(s) 771, 867, 882, 1046
CviQI GTAC 1 cut(s) 317
DdeI CTNAG 2 cut(s) 264, 809
DpnI GATC 7 cut(s) 17, 71, 243, 573, 695, 723, 821
DpnII GATC 7 cut(s) 15, 69, 241, 571, 693, 721, 819
DraI TTTAAA 1 cut(s) 1002
EaeI YGGCCR 1 cut(s) 767
EciI GGCGGA 1 cut(s) 927
Eco130I CCWWGG 1 cut(s) 918
Eco24I GRGCYC 1 cut(s) 979
Eco47I GGWCC 1 cut(s) 509
Eco57I CTGAAG 2 cut(s) 20, 396
Eco72I CACGTG 1 cut(s) 947
Eco88I CYCGRG 1 cut(s) 63
EcoRII CCWGG 1 cut(s) 72
EcoT14I CCWWGG 1 cut(s) 918
EcoT38I GRGCYC 1 cut(s) 979
ErhI CCWWGG 1 cut(s) 918
FaeI CATG 4 cut(s) 774, 870, 885, 1049
FaqI GGGAC 1 cut(s) 660
FatI CATG 4 cut(s) 770, 866, 881, 1045
FauI CCCGC 1 cut(s) 637
FauNDI CATATG 1 cut(s) 496
FblI GTMKAC 2 cut(s) 381, 793
Fnu4HI GCNGC 9 cut(s) 27, 44, 113, 147, 176, 284, 963, 1043, 1107
FokI GGATG 2 cut(s) 518, 794
FriOI GRGCYC 1 cut(s) 979
Fsp4HI GCNGC 9 cut(s) 27, 44, 113, 147, 176, 284, 963, 1043, 1107
FspBI CTAG 1 cut(s) 1150
GluI GCNGC 9 cut(s) 27, 44, 113, 147, 176, 284, 963, 1043, 1107
GsaI CCCAGC 1 cut(s) 983
GsuI CTGGAG 1 cut(s) 68
HaeIII GGCC 2 cut(s) 227, 769
HapII CCGG 2 cut(s) 418, 984
Hin1II CATG 4 cut(s) 774, 870, 885, 1049
HincII GTYRAC 3 cut(s) 57, 415, 794
HindII GTYRAC 3 cut(s) 57, 415, 794
HindIII AAGCTT 2 cut(s) 88, 290
HinfI GANTC 4 cut(s) 624, 651, 878, 1006
HpaI GTTAAC 1 cut(s) 57
HpaII CCGG 2 cut(s) 418, 984
HphI GGTGA 4 cut(s) 287, 745, 949, 998
Hpy166II GTNNAC 5 cut(s) 57, 382, 415, 623, 794
Hpy188I TCNGA 5 cut(s) 232, 376, 712, 810, 1015
Hpy188III TCNNGA 4 cut(s) 65, 561, 691, 800
Hpy8I GTNNAC 5 cut(s) 57, 382, 415, 623, 794
Hpy99I CGWCG 1 cut(s) 1137
HpyAV CCTTC 2 cut(s) 44, 585
HpyCH4III ACNGT 3 cut(s) 673, 681, 733
HpyCH4IV ACGT 2 cut(s) 946, 1132
HpyCH4V TGCA 8 cut(s) 115, 146, 403, 895, 965, 1030, 1089, 1109
HpyF10VI GCNNNNNNNGC 2 cut(s) 146, 289
HpyF3I CTNAG 2 cut(s) 264, 809
HpySE526I ACGT 2 cut(s) 946, 1132
Hsp92II CATG 4 cut(s) 774, 870, 885, 1049
KspAI GTTAAC 1 cut(s) 57
Kzo9I GATC 7 cut(s) 15, 69, 241, 571, 693, 721, 819
LmnI GCTCC 5 cut(s) 98, 861, 904, 914, 974
Lsp1109I GCAGC 8 cut(s) 30, 99, 158, 187, 295, 949, 1054, 1093
LweI GCATC 1 cut(s) 151
MaeI CTAG 1 cut(s) 1150
MaeII ACGT 2 cut(s) 946, 1132
MaeIII GTNAC 5 cut(s) 733, 757, 937, 1078, 1136
MalI GATC 7 cut(s) 17, 71, 243, 573, 695, 723, 821
MboI GATC 7 cut(s) 15, 69, 241, 571, 693, 721, 819
MboII GAAGA 7 cut(s) 542, 570, 646, 716, 1028, 1031, 1081
MflI RGATCY 3 cut(s) 15, 69, 693
MhlI GDGCHC 2 cut(s) 866, 979
MluCI AATT 4 cut(s) 358, 551, 589, 1074
MlyI GAGTC 3 cut(s) 618, 660, 1000
MmeI TCCRAC 1 cut(s) 483
MseI TTAA 6 cut(s) 56, 351, 684, 750, 1001, 1065
MslI CAYNNNNRTG 1 cut(s) 266
MspA1I CMGCKG 1 cut(s) 178
MspCI CTTAAG 1 cut(s) 1064
MspI CCGG 2 cut(s) 418, 984
MspR9I CCNGG 1 cut(s) 74
Mva1269I GAATGC 1 cut(s) 29
MvaI CCWGG 1 cut(s) 74
MwoI GCNNNNNNNGC 2 cut(s) 146, 289
NdeI CATATG 1 cut(s) 496
NdeII GATC 7 cut(s) 15, 69, 241, 571, 693, 721, 819
NlaIII CATG 4 cut(s) 774, 870, 885, 1049
NlaIV GGNNCC 2 cut(s) 916, 976
NmeAIII GCCGAG 2 cut(s) 606, 745
NmuCI GTSAC 2 cut(s) 733, 937
NspI RCATGY 2 cut(s) 870, 1049
PciI ACATGT 1 cut(s) 866
PcsI WCGNNNNNNNCGW 1 cut(s) 246
PctI GAATGC 1 cut(s) 29
PfeI GAWTC 1 cut(s) 878
PkrI GCNGC 9 cut(s) 28, 45, 114, 148, 177, 285, 964, 1044, 1108
PleI GAGTC 3 cut(s) 618, 659, 1000
PmaCI CACGTG 1 cut(s) 947
PmlI CACGTG 1 cut(s) 947
PpsI GAGTC 3 cut(s) 618, 659, 1000
Ppu21I YACGTR 1 cut(s) 947
PscI ACATGT 1 cut(s) 866
Psp6I CCWGG 1 cut(s) 72
PspCI CACGTG 1 cut(s) 947
PspFI CCCAGC 1 cut(s) 979
PspGI CCWGG 1 cut(s) 72
PspN4I GGNNCC 2 cut(s) 916, 976
PspPI GGNCC 1 cut(s) 509
PstI CTGCAG 1 cut(s) 117
PstNI CAGNNNCTG 1 cut(s) 43
PsuI RGATCY 3 cut(s) 15, 69, 693
PvuII CAGCTG 1 cut(s) 178
RsaI GTAC 1 cut(s) 318
RsaNI GTAC 1 cut(s) 317
RseI CAYNNNNRTG 1 cut(s) 266
SalI GTCGAC 1 cut(s) 792
SaqAI TTAA 6 cut(s) 56, 351, 684, 750, 1001, 1065
SatI GCNGC 9 cut(s) 27, 44, 113, 147, 176, 284, 963, 1043, 1107
Sau3AI GATC 7 cut(s) 15, 69, 241, 571, 693, 721, 819
Sau96I GGNCC 1 cut(s) 509
SchI GAGTC 3 cut(s) 618, 660, 1000
ScrFI CCNGG 1 cut(s) 74
SduI GDGCHC 2 cut(s) 866, 979
SfaNI GCATC 1 cut(s) 151
SfcI CTRYAG 2 cut(s) 113, 669
SinI GGWCC 1 cut(s) 509
SmiMI CAYNNNNRTG 1 cut(s) 266
SmlI CTYRAG 3 cut(s) 287, 689, 1064
SmoI CTYRAG 3 cut(s) 287, 689, 1064
Sse9I AATT 4 cut(s) 358, 551, 589, 1074
SsiI CCGC 6 cut(s) 5, 26, 138, 164, 644, 912
SspMI CTAG 1 cut(s) 1150
StyD4I CCNGG 1 cut(s) 72
StyI CCWWGG 1 cut(s) 918
TaaI ACNGT 3 cut(s) 673, 681, 733
TaiI ACGT 2 cut(s) 949, 1135
TaqI TCGA 3 cut(s) 249, 793, 822
TasI AATT 4 cut(s) 358, 551, 589, 1074
TauI GCSGC 1 cut(s) 29
TfiI GAWTC 1 cut(s) 878
Tru1I TTAA 6 cut(s) 56, 351, 684, 750, 1001, 1065
Tru9I TTAA 6 cut(s) 56, 351, 684, 750, 1001, 1065
TscAI CASTG 3 cut(s) 198, 268, 678
TseFI GTSAC 2 cut(s) 733, 937
TseI GCWGC 8 cut(s) 43, 112, 146, 175, 283, 962, 1042, 1106
Tsp45I GTSAC 2 cut(s) 733, 937
TspDTI ATGAA 5 cut(s) 383, 483, 543, 870, 966
TspGWI ACGGA 1 cut(s) 896
TspRI CASTG 3 cut(s) 198, 268, 678
Vha464I CTTAAG 1 cut(s) 1064
VpaK11BI GGWCC 1 cut(s) 509
XceI RCATGY 2 cut(s) 870, 1049
XcmI CCANNNNNNNNNTGG 1 cut(s) 613
XmiI GTMKAC 2 cut(s) 381, 793
XspI CTAG 1 cut(s) 1150
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.