Rmu_sc0022723.1_g000001

disease resistance

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0022723.1
OG0000070
Physical Location & Seq
Reverse (-)
9 .. 3107
3099 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0022723.1_g000001.1.cds

Sequence Viewer

Length: 3099 bp
atgatgggagcgatacaagttcataatttgaagtgtatatcaagtcatgattgttggcaggtatttgaacaacattcattcttgaacattaacaacagcagaccacataattttgagtcgcttcgggacaagattactgtgaaatgcaatggattgcctttggctgcaaggacgcttggtggacttttacggtgcaaagaaattggtgaatgggaagaaatattggacaacaaattatggagtctatcagataagagtggtattctcccagtattgaaattgagctatcactctctcccttcaaacctaaaaagatgctttgcttattgctcaatacttccaaatgactatgaattcagtgagaagcagttgatccttctatggatggcagagggtttgatacagcatccagaacagagtagacaaatggaagatttgggtggcgagtattttcaggagctattatctaggtcattatttcaaaaatcaaacaaggacagttcacaatatgttatgcatgacctcatcagtgaattggcacggtgggctgcaggagaagtttgtttcagactggaggacaatgtggatgacaacatgcaacatcttaggtgttctccaaaagctcgacattcttcttacatttctggtgagtttgatgggattacaaagtttgtagccttttctgaagccaaacgtttgcggacgttcctgccatttacactttcagaaaatccacagaattacttgacctgtaaggttactcttgatttagtgccgaaattgcaatacttgagggtcctgtctttcaatagctaccagataaccgagctgccagattcaataggtaaactgaagtatctacggtaccttgatgtttctcacacgccaataaggagcttacctgaatcaacaagcacactttataacttacaggtattgatattagaaagttgttctcttttggaggcactacccacaaatatgaggaatctcattaatttgcgtcatctcaacaattcaagtgtacattcgttgaagggaatgcccatgcaactaggtcggttaactaatctgcaaacacttgctgattttgttgtgggtaagggcagtgagtcggggataagagagataggtcctctactgcatctccgggggacattacacctctcaagactggagaatgtgactgatgttgaagatgcaaggagggccgacttaattagcaaaaaagggcttgatgtcttgctactacagtggcatgagttgaacggcacgggagaaagggaagcagatgttcttgacatgttacaacctcatagaaagctaaaagaactcaccatacggcgatacactggtgaagaaatttctgcttgggtgggaagtccttcattcactagcatggtacttgtaaacttggaagattgtagtaaatgcagattcttgccaccacttggacagttaccttctctcaaggagcttttcataaaaggaatgtctggagtggaaagcgtgggttctgagttctatggagagggtagcttgccgtttccactattagagaccctttcatttcagaatatgcaaggatggaaggagtggattcctcttgaaagacatcagggaactaaagattttccttgcctgaaaaagctttccatttatgcatgccccaaactggagggtgtggtgccagagaacctttattcattagaagagcttgtggttcgtgaatgtgaccaactagtggtctcaattgccaactataaagaactttccgtattatgcatccgctattgcaaaggggttgtatacagaagtgtggttgactttcagttattatatttggagataactggctgtgaggagctgacatgttcattgcagaatgaggatggatttctgcaaaaccttatgtcacttcgtcatttgagtattgaaggtaactcacatcttgttcaattgcatcacctcagattactacaagagcttcacattgataagtggccaagcctagtttcttttccattggctagtttgccaccttctcttaaagatataaagattcgaggttgcgattctcttacttattttgcaagatatcagataccgccaagtctaaggagaatagagataaatagatgccaaaatttgaaatcattggtggaggatgaggaggcgatatggggctcttcatcttcttctccttgtttgattcaggatgaggagtcctgtctcgagtatttgagcatatggaactgtccatctttgatatctctatcatccagagtcaagctacccagggcgcttaaacaccttcagatacatacttgcagacaactggagtcaatagctgatgcattacatgataacatttctctcgagtacattcacatctggtattgctcaaatctccaatatttaccagaaggtctttaccacctcttcaatcttcagaagatgagtatttacggttgtagaagtcttgtttccttcccgacaggagggttcccaagaagtccttccaacttgagagagtttgagatcaccagttgtgagaaattggaggccttacccaaaggcatgcacaacctcaactctcttgagatattaaggatcccctattgtgaaggtttcacttccttcctagaagaggggttgcctcctaaccttcagtctcttaaagttctgaatctcaagagttgtaaaccactcttcaaatgcggcttgcacagactcacatctcttagagagttgtggatcattggtgaagatccggaactggtttcctttccacccaagaaagagatggtgcttcccaaatctctcattaagctcatcatcgaagactttccgaatctcaagtatctacccagcaaagggtttcagtccctcacatctcttaaaagactctatatctggagttgccccaagctactgtcctttccagatgagggcagtcttctttcactgacacaacttagtatccgtcactgtccactgctagaagtgagatgcaaaccaggtagaggtcagtattggcgctccatagcccacatcccttacatatggttgggagacaagagaattcaagctccgtga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
NB-ARC

Protein Analysis

1032

Amino Acids

117.97

Weight (kDa)

6.78

Isoelectric Point (pI)

54.06

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000070)

Species Orthologous Gene IDs
fragaria_vesca FvH4_7g00360 FvH4_7g00850 FvH4_7g02400 FvH4_7g02430 FvH4_7g02450 FvH4_7g25671 FvH4_7g25680 FvH4_7g25683 FvH4_7g26980 FvH4_7g27330 FvH4_7g27355 FvH4_7g27610 FvH4_7g27642 FvH4_7g27890 FvH4_7g27891 FvH4_7g27891 FvH4_7g27891 FvH4_7g28110 FvH4_7g28390
malus_domestica MD00G1070800.v1.1 MD00G1168000.v1.1 MD00G1168300.v1.1 MD00G1168700.v1.1 MD02G1293100.v1.1 MD02G1293200.v1.1 MD02G1314300.v1.1 MD03G1009000.v1.1 MD03G1009400.v1.1 MD03G1042300.v1.1 MD03G1042400.v1.1 MD07G1033600.v1.1 MD07G1033700.v1.1 MD07G1033900.v1.1 MD11G1011400.v1.1 MD11G1011700.v1.1 MD11G1029800.v1.1 MD11G1029900.v1.1 MD11G1030300.v1.1 MD11G1030400.v1.1 MD11G1030500.v1.1 MD11G1031300.v1.1 MD11G1031600.v1.1 MD11G1032000.v1.1 MD11G1033200.v1.1 MD11G1033600.v1.1 MD11G1033800.v1.1 MD11G1033900.v1.1 MD11G1034100.v1.1 MD11G1034400.v1.1 MD11G1040600.v1.1 MD11G1041100.v1.1 MD11G1043100.v1.1 MD11G1043500.v1.1 MD11G1044500.v1.1 MD11G1045100.v1.1 MD11G1045600.v1.1
prunus_persica Prupe.2G022400_v2.0.a1 Prupe.2G022400_v2.0.a1 Prupe.2G022400_v2.0.a1 Prupe.2G022500_v2.0.a1 Prupe.2G022500_v2.0.a1 Prupe.2G022900_v2.0.a1 Prupe.2G023500_v2.0.a1 Prupe.2G023500_v2.0.a1 Prupe.2G023500_v2.0.a1 Prupe.2G023500_v2.0.a1 Prupe.2G023500_v2.0.a1 Prupe.2G023500_v2.0.a1 Prupe.2G023600_v2.0.a1 Prupe.2G028000_v2.0.a1 Prupe.2G030200_v2.0.a1 Prupe.2G067600_v2.0.a1 Prupe.8G117900_v2.0.a1
pyrus_communis pycom02g26350 pycom03g03270 pycom07g02370 pycom11g00750 pycom11g00790 pycom11g02340 pycom11g02370 pycom11g02380 pycom11g02390 pycom11g02410 pycom11g02460 pycom11g02470 pycom11g02500 pycom11g02510 pycom11g02520 pycom11g02530 pycom11g02580 pycom11g02590 pycom11g02680 pycom11g02710 pycom11g02720 pycom11g02730 pycom11g02750 pycom11g02760 pycom11g02770 pycom11g03690 pycom13g25120 pycom13g25130 pycom13g25140 pycom13g25170 pycom13g25180 pycom13g25190 pycom13g25210
rosa_chinensis RchiOBHm_Chr1g0315001 RchiOBHm_Chr1g0315411 RchiOBHm_Chr1g0317951 RchiOBHm_Chr1g0319741 RchiOBHm_Chr1g0319841 RchiOBHm_Chr1g0319911 RchiOBHm_Chr1g0319991 RchiOBHm_Chr1g0320001 RchiOBHm_Chr1g0320021 RchiOBHm_Chr1g0320081 RchiOBHm_Chr1g0320111 RchiOBHm_Chr1g0320131 RchiOBHm_Chr1g0320161 RchiOBHm_Chr1g0320171 RchiOBHm_Chr1g0320241 RchiOBHm_Chr1g0320281 RchiOBHm_Chr1g0320411 RchiOBHm_Chr1g0320461 RchiOBHm_Chr1g0320551 RchiOBHm_Chr1g0320581 RchiOBHm_Chr1g0320661 RchiOBHm_Chr1g0320891 RchiOBHm_Chr1g0320971 RchiOBHm_Chr1g0321021 RchiOBHm_Chr1g0321031 RchiOBHm_Chr1g0321091 RchiOBHm_Chr1g0321351 RchiOBHm_Chr1g0321481 RchiOBHm_Chr1g0321491 RchiOBHm_Chr1g0327521 RchiOBHm_Chr1g0328061 RchiOBHm_Chr1g0334991 RchiOBHm_Chr1g0373781 RchiOBHm_Chr1g0373891 RchiOBHm_Chr1g0374841 RchiOBHm_Chr2g0131111 RchiOBHm_Chr2g0131121 RchiOBHm_Chr4g0408901 RchiOBHm_Chr5g0041691 RchiOBHm_Chr7g0237021
rosa_laevigata RLG00000019168 RLG00000030456 RLG00000030460 RLG00000030571
rosa_multiflora Rmu_co7963468.1_g000001 Rmu_co7991248.1_g000001 Rmu_co8195256.1_g000001 Rmu_co8312199.1_g000001 Rmu_co8349215.1_g000001 Rmu_co8351041.1_g000001 Rmu_co8422719.1_g000001 Rmu_co8450711.1_g000001 Rmu_co8465555.1_g000001 Rmu_co8489965.1_g000001 Rmu_sc0000087.1_g000014 Rmu_sc0000272.1_g000015 Rmu_sc0000724.1_g000006 Rmu_sc0000724.1_g000021 Rmu_sc0000724.1_g000022 Rmu_sc0000861.1_g000024 Rmu_sc0001049.1_g000006 Rmu_sc0001049.1_g000007 Rmu_sc0001512.1_g000001 Rmu_sc0002022.1_g000004 Rmu_sc0002063.1_g000011 Rmu_sc0002131.1_g000024 Rmu_sc0002337.1_g000012 Rmu_sc0002341.1_g000005 Rmu_sc0002539.1_g000117 Rmu_sc0002745.1_g000005 Rmu_sc0002745.1_g000006 Rmu_sc0003145.1_g000002 Rmu_sc0003199.1_g000007 Rmu_sc0003270.1_g000039 Rmu_sc0003270.1_g000040 Rmu_sc0003423.1_g000001 Rmu_sc0003423.1_g000002 Rmu_sc0003629.1_g000067 Rmu_sc0004039.1_g000002 Rmu_sc0004555.1_g000001 Rmu_sc0004555.1_g000005 Rmu_sc0004555.1_g000006 Rmu_sc0004947.1_g000025 Rmu_sc0004947.1_g000026 Rmu_sc0005255.1_g000025 Rmu_sc0007977.1_g000016 Rmu_sc0008752.1_g000005 Rmu_sc0009236.1_g000004 Rmu_sc0009236.1_g000008 Rmu_sc0009236.1_g000009 Rmu_sc0009236.1_g000010 Rmu_sc0011424.1_g000036 Rmu_sc0013413.1_g000001 Rmu_sc0013735.1_g000002 Rmu_sc0015304.1_g000002 Rmu_sc0015304.1_g000003 Rmu_sc0015585.1_g000001 Rmu_sc0018410.1_g000001 Rmu_sc0022723.1_g000001 Rmu_sc0022723.1_g000002 Rmu_sc0022724.1_g000001 Rmu_sc0023430.1_g000001 Rmu_sc0026053.1_g000001 Rmu_sc0026429.1_g000002 Rmu_sc0026647.1_g000001 Rmu_sc0031359.1_g000001 Rmu_ssc0000042.1_g000040 Rmu_ssc0000081.1_g000001 Rmu_ssc0000300.1_g000011
rosa_roxburghii Rroxscaffold_160G00433620 Rroxscaffold_160G00433990 Rroxscaffold_1G00038820 Rroxscaffold_2G00113190 Rroxscaffold_4G00283240 Rroxscaffold_4G00283930 Rroxscaffold_4G00284010 Rroxscaffold_4G00322600 Rroxscaffold_4G00327710 Rroxscaffold_4G00328100 Rroxscaffold_4G00328130 Rroxscaffold_4G00331590 Rroxscaffold_5G00353280
rosa_rugosa Rorug01G0004200 Rorug01G0018800 Rorug01G0018900 Rorug01G0029900 Rorug01G0030000 Rorug01G0030000 Rorug01G0030000 Rorug01G0030200 Rorug01G0030300 Rorug01G0030800 Rorug01G0032400 Rorug01G0032900 Rorug01G0055800 Rorug01G0067600 Rorug01G0067700 Rorug01G0067800 Rorug01G0067900 Rorug01G0068000 Rorug01G0379500 Rorug01G0379600 Rorug01G0379600 Rorug01G0385200 Rorug01G0385300 Rorug02G0295100 Rorug04G0088500 Rorug04G0088600 Rorug05G0194900 Rorug07G0301400
rosa_samantha Rh1AG014800 Rh1AG015200 Rh1AG030500 Rh1AG041800 Rh1AG042300 Rh1AG042700 Rh1AG042800 Rh1AG042900 Rh1AG045000 Rh1AG085100 Rh1AG085200 Rh1AG388600 Rh1AG396700 Rh1AG396900 Rh1BG007300 Rh1BG039200 Rh1BG039600 Rh1BG042800 Rh1BG067300 Rh1BG109700 Rh1BG109900 Rh1BG354000 Rh1CG043800 Rh1CG044400 Rh1DG008600 Rh1DG022900 Rh1DG023400 Rh1DG023600 Rh1DG023900 Rh1DG024100 Rh1DG024400 Rh1DG024500 Rh1DG025500 Rh1DG025700 Rh1DG026500 Rh1DG026800 Rh1DG038900 Rh1DG048800 Rh1DG049300 Rh1DG051700 Rh1DG052000 Rh1DG146200 Rh1DG383500 Rh2BG354900 Rh2CG333600 Rh4BG149600 Rh4BG149700 Rh4CG160600
rosa_wichuraiana Rw0G001100 Rw0G001130 Rw0G001180 Rw0G012580 Rw1G003480 Rw1G003540 Rw1G003600 Rw1G003640 Rw1G003670 Rw1G003750 Rw1G003940 Rw1G006650 Rw1G034550 Rw1G034560 Rw1G034650 Rw1G034660 Rw1G035170 Rw1G035190 Rw1G037060 Rw2G028210 Rw4G012540 Rw5G026370 Rw7G037900

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 924
Acc36I ACCTGC 1 cut(s) 49
Acc65I GGTACC 1 cut(s) 864
AccB1I GGYRCC 2 cut(s) 864, 1687
AccB7I CCANNNNNTGG 2 cut(s) 1451, 1744
AccI GTMKAC 2 cut(s) 421, 1809
AccIII TCCGGA 1 cut(s) 2773
AciI CCGC 4 cut(s) 700, 1789, 2108, 2721
AclI AACGTT 1 cut(s) 694
AclWI GGATC 5 cut(s) 367, 2608, 2621, 2765, 2765
AcoI YGGCCR 1 cut(s) 2003
AcsI RAATTY 4 cut(s) 353, 1362, 2146, 3084
AcuI CTGAAG 5 cut(s) 705, 872, 2300, 2435, 2654
AfaI GTAC 4 cut(s) 866, 1026, 1404, 2384
AfiI CCNNNNNNNGG 9 cut(s) 1451, 1675, 1744, 2501, 2650, 2876, 2877, 2951, 3026
AflIII ACRYGT 2 cut(s) 1302, 1871
AhlI ACTAGT 1 cut(s) 1741
AjnI CCWGG 2 cut(s) 2297, 3019
AjuI GAANNNNNNNTTGG 4 cut(s) 1999, 2031, 2503, 2535
Alw26I GTCTC 5 cut(s) 1553, 1753, 2237, 2679, 3069
AlwI GGATC 5 cut(s) 367, 2608, 2621, 2765, 2765
Ama87I CYCGRG 2 cut(s) 2234, 2378
Aor13HI TCCGGA 1 cut(s) 2773
AoxI GGCC 3 cut(s) 1209, 2003, 2565
ApeKI GCWGC 3 cut(s) 164, 548, 829
ApoI RAATTY 4 cut(s) 353, 1362, 2146, 3084
AseI ATTAAT 1 cut(s) 996
Asp700I GAANNNNTTC 3 cut(s) 1384, 2518, 2847
Asp718I GGTACC 1 cut(s) 864
AspLEI GCGC 2 cut(s) 2305, 3042
AspS9I GGNCC 3 cut(s) 796, 1133, 1209
AsuC2I CCSGG 1 cut(s) 1151
AsuHPI GGTGA 7 cut(s) 218, 659, 1327, 1367, 1958, 2536, 2777
AvaI CYCGRG 2 cut(s) 2234, 2378
AvaII GGWCC 2 cut(s) 796, 1133
BaeI ACNNNNGTAYC 4 cut(s) 839, 872, 1339, 1372
BalI TGGCCA 1 cut(s) 2005
BamHI GGATCC 1 cut(s) 2613
BanI GGYRCC 2 cut(s) 864, 1687
BanII GRGCYC 1 cut(s) 2189
BbsI GAAGAC 2 cut(s) 2850, 2951
BbvI GCAGC 3 cut(s) 151, 535, 816
BccI CCATC 6 cut(s) 379, 650, 1581, 1886, 2269, 2800
BceAI ACGGC 3 cut(s) 1285, 1358, 1528
BcgI CGANNNNNNTGC 2 cut(s) 1040, 1074
BciT130I CCWGG 2 cut(s) 2299, 3021
BciVI GTATCC 1 cut(s) 2993
BcnI CCSGG 1 cut(s) 1151
BcoDI GTCTC 5 cut(s) 1553, 1753, 2237, 2679, 3069
BcuI ACTAGT 1 cut(s) 1741
BfaI CTAG 8 cut(s) 468, 1055, 1395, 1742, 2012, 2031, 2645, 3002
BfmI CTRYAG 2 cut(s) 549, 1250
BfoI RGCGCY 2 cut(s) 2306, 3043
BfuAI ACCTGC 1 cut(s) 49
BfuI GTATCC 1 cut(s) 2993
BisI GCNGC 4 cut(s) 165, 549, 830, 2722
BlsI GCNGC 4 cut(s) 166, 550, 831, 2723
Bme1390I CCNGG 3 cut(s) 1151, 2299, 3021
Bme18I GGWCC 2 cut(s) 796, 1133
BmeT110I CYCGRG 2 cut(s) 2234, 2378
BmgT120I GGNCC 3 cut(s) 796, 1133, 1209
BmiI GGNNCC 5 cut(s) 797, 866, 1689, 2507, 2615
BmrFI CCNGG 3 cut(s) 1151, 2299, 3021
BmrI ACTGGG 1 cut(s) 263
BmsI GCATC 9 cut(s) 305, 415, 1153, 1189, 1794, 1972, 2129, 2344, 3002
BmuI ACTGGG 1 cut(s) 263
BpiI GAAGAC 2 cut(s) 2850, 2951
BpmI CTGGAG 6 cut(s) 593, 1196, 1518, 1697, 2360, 2938
BpuEI CTTGAG 7 cut(s) 811, 1153, 1454, 2548, 2621, 2678, 2843
BpuMI CCSGG 1 cut(s) 1151
BsaI GGTCTC 2 cut(s) 1553, 1753
BsaJI CCNNGG 3 cut(s) 1150, 2297, 2298
BsaWI WCCGGW 1 cut(s) 2773
BsaXI ACNNNNNCTCC 2 cut(s) 1131, 1161
Bsc4I CCNNNNNNNGG 9 cut(s) 1451, 1675, 1744, 2501, 2650, 2876, 2877, 2951, 3026
Bse1I ACTGG 9 cut(s) 269, 576, 1179, 1357, 1680, 1858, 2343, 2547, 2784
Bse3DI GCAATG 2 cut(s) 154, 1877
BseAI TCCGGA 1 cut(s) 2773
BseBI CCWGG 2 cut(s) 2299, 3021
BseDI CCNNGG 3 cut(s) 1150, 2297, 2298
BseLI CCNNNNNNNGG 9 cut(s) 1451, 1675, 1744, 2501, 2650, 2876, 2877, 2951, 3026
BseMI GCAATG 2 cut(s) 154, 1877
BseMII CTCAG 2 cut(s) 1509, 1984
BseNI ACTGG 9 cut(s) 269, 576, 1179, 1357, 1680, 1858, 2343, 2547, 2784
BseRI GAGGAG 3 cut(s) 1877, 2186, 2237
BseXI GCAGC 3 cut(s) 151, 535, 816
BseYI CCCAGC 1 cut(s) 2870
BshFI GGCC 3 cut(s) 1211, 2005, 2567
BshNI GGYRCC 2 cut(s) 864, 1687
BsiHKCI CYCGRG 2 cut(s) 2234, 2378
BsiSI CCGG 2 cut(s) 1150, 2774
BslFI GGGAC 3 cut(s) 140, 1168, 2872
BslI CCNNNNNNNGG 9 cut(s) 1451, 1675, 1744, 2501, 2650, 2876, 2877, 2951, 3026
BsmAI GTCTC 5 cut(s) 1553, 1753, 2237, 2679, 3069
BsmFI GGGAC 3 cut(s) 140, 1168, 2872
BsmI GAATGC 1 cut(s) 1047
BsnI GGCC 3 cut(s) 1211, 2005, 2567
Bso31I GGTCTC 2 cut(s) 1553, 1753
BsoBI CYCGRG 2 cut(s) 2234, 2378
Bsp1286I GDGCHC 1 cut(s) 2189
Bsp13I TCCGGA 1 cut(s) 2773
Bsp1407I TGTACA 1 cut(s) 1024
Bsp143I GATC 5 cut(s) 372, 2541, 2613, 2757, 2770
BspACI CCGC 4 cut(s) 700, 1789, 2108, 2721
BspANI GGCC 3 cut(s) 1211, 2005, 2567
BspCNI CTCAG 2 cut(s) 1510, 1983
BspEI TCCGGA 1 cut(s) 2773
BspHI TCATGA 1 cut(s) 46
BspLI GGNNCC 5 cut(s) 797, 866, 1689, 2507, 2615
BspMAI CTGCAG 1 cut(s) 553
BspMI ACCTGC 1 cut(s) 49
BspPI GGATC 5 cut(s) 367, 2608, 2621, 2765, 2765
BspQI GCTCTTC 2 cut(s) 1707, 2194
BspT107I GGYRCC 2 cut(s) 864, 1687
BspTNI GGTCTC 2 cut(s) 1553, 1753
BsrDI GCAATG 2 cut(s) 154, 1877
BsrGI TGTACA 1 cut(s) 1024
BsrI ACTGG 9 cut(s) 269, 576, 1179, 1357, 1680, 1858, 2343, 2547, 2784
BssECI CCNNGG 3 cut(s) 1150, 2297, 2298
BssMI GATC 5 cut(s) 372, 2541, 2613, 2757, 2770
BssNAI GTATAC 1 cut(s) 1810
Bst1107I GTATAC 1 cut(s) 1810
Bst2UI CCWGG 2 cut(s) 2299, 3021
Bst6I CTCTTC 5 cut(s) 1707, 2194, 2447, 2643, 2717
BstAUI TGTACA 1 cut(s) 1024
BstC8I GCNNGC 4 cut(s) 1541, 1666, 2582, 2726
BstDEI CTNAG 6 cut(s) 605, 1518, 1970, 2117, 2744, 2978
BstENI CCTNNNNNAGG 1 cut(s) 2648
BstH2I RGCGCY 2 cut(s) 2306, 3043
BstHHI GCGC 2 cut(s) 2305, 3042
BstKTI GATC 5 cut(s) 375, 2544, 2616, 2760, 2773
BstMAI GTCTC 5 cut(s) 1553, 1753, 2237, 2679, 3069
BstMBI GATC 5 cut(s) 372, 2541, 2613, 2757, 2770
BstMWI GCNNNNNNNGC 3 cut(s) 545, 781, 1208
BstNI CCWGG 2 cut(s) 2299, 3021
BstNSI RCATGY 5 cut(s) 598, 1306, 1668, 1875, 2584
BstSCI CCNGG 3 cut(s) 1149, 2297, 3019
BstSFI CTRYAG 2 cut(s) 549, 1250
BstV1I GCAGC 3 cut(s) 151, 535, 816
BstV2I GAAGAC 2 cut(s) 2850, 2951
BstX2I RGATCY 2 cut(s) 2613, 2770
BstYI RGATCY 2 cut(s) 2613, 2770
BstZ17I GTATAC 1 cut(s) 1810
BsuI GTATCC 1 cut(s) 2993
BsuRI GGCC 3 cut(s) 1211, 2005, 2567
BtsI GCAGTG 2 cut(s) 1114, 2996
BtsIMutI CAGTG 8 cut(s) 364, 535, 1114, 1259, 1350, 2966, 2989, 2996
BveI ACCTGC 1 cut(s) 49
Cac8I GCNNGC 4 cut(s) 1541, 1666, 2582, 2726
CciI TCATGA 1 cut(s) 46
CfoI GCGC 2 cut(s) 2305, 3042
Cfr13I GGNCC 3 cut(s) 796, 1133, 1209
CseI GACGC 2 cut(s) 181, 992
CsiI ACCWGGT 1 cut(s) 3019
Csp6I GTAC 4 cut(s) 865, 1025, 1403, 2383
CviQI GTAC 4 cut(s) 865, 1025, 1403, 2383
DdeI CTNAG 6 cut(s) 605, 1518, 1970, 2117, 2744, 2978
DpnI GATC 5 cut(s) 374, 2543, 2615, 2759, 2772
DpnII GATC 5 cut(s) 372, 2541, 2613, 2757, 2770
EaeI YGGCCR 1 cut(s) 2003
Eam1104I CTCTTC 5 cut(s) 1707, 2194, 2447, 2643, 2717
EarI CTCTTC 5 cut(s) 1707, 2194, 2447, 2643, 2717
Eco147I AGGCCT 1 cut(s) 2567
Eco24I GRGCYC 1 cut(s) 2189
Eco31I GGTCTC 2 cut(s) 1553, 1753
Eco32I GATATC 2 cut(s) 2099, 2271
Eco47I GGWCC 2 cut(s) 796, 1133
Eco57I CTGAAG 5 cut(s) 705, 872, 2300, 2435, 2654
Eco88I CYCGRG 2 cut(s) 2234, 2378
EcoNI CCTNNNNNAGG 1 cut(s) 2648
EcoO109I RGGNCCY 2 cut(s) 796, 1133
EcoRI GAATTC 2 cut(s) 353, 3084
EcoRII CCWGG 2 cut(s) 2297, 3019
EcoRV GATATC 2 cut(s) 2099, 2271
EcoT22I ATGCAT 4 cut(s) 519, 1666, 1787, 2359
EcoT38I GRGCYC 1 cut(s) 2189
FalI AAGNNNNNCTT 2 cut(s) 2503, 2535
FaqI GGGAC 3 cut(s) 140, 1168, 2872
FauNDI CATATG 2 cut(s) 2249, 3065
FblI GTMKAC 2 cut(s) 421, 1809
Fnu4HI GCNGC 4 cut(s) 165, 549, 830, 2722
FriOI GRGCYC 1 cut(s) 2189
Fsp4HI GCNGC 4 cut(s) 165, 549, 830, 2722
FspBI CTAG 8 cut(s) 468, 1055, 1395, 1742, 2012, 2031, 2645, 3002
GlaI GCGC 2 cut(s) 2304, 3041
GluI GCNGC 4 cut(s) 165, 549, 830, 2722
GsaI CCCAGC 1 cut(s) 2874
GsuI CTGGAG 6 cut(s) 593, 1196, 1518, 1697, 2360, 2938
HaeII RGCGCY 2 cut(s) 2306, 3043
HaeIII GGCC 3 cut(s) 1211, 2005, 2567
HapII CCGG 2 cut(s) 1150, 2774
HgaI GACGC 2 cut(s) 181, 992
HhaI GCGC 2 cut(s) 2305, 3042
Hin6I GCGC 2 cut(s) 2303, 3040
HinP1I GCGC 2 cut(s) 2303, 3040
HincII GTYRAC 2 cut(s) 1065, 1825
HindII GTYRAC 2 cut(s) 1065, 1825
HindIII AAGCTT 1 cut(s) 1649
HpaI GTTAAC 1 cut(s) 1065
HpaII CCGG 2 cut(s) 1150, 2774
HphI GGTGA 7 cut(s) 218, 659, 1327, 1367, 1958, 2536, 2777
HpyCH4IV ACGT 2 cut(s) 694, 704
HpyF10VI GCNNNNNNNGC 3 cut(s) 545, 781, 1208
HpyF3I CTNAG 6 cut(s) 605, 1518, 1970, 2117, 2744, 2978
HpySE526I ACGT 2 cut(s) 694, 704
HspAI GCGC 2 cut(s) 2303, 3040
Kpn2I TCCGGA 1 cut(s) 2773
KpnI GGTACC 1 cut(s) 868
KspAI GTTAAC 1 cut(s) 1065
Kzo9I GATC 5 cut(s) 372, 2541, 2613, 2757, 2770
LguI GCTCTTC 2 cut(s) 1707, 2194
LmnI GCTCC 7 cut(s) 8, 457, 894, 1474, 1864, 3047, 3097
Lsp1109I GCAGC 3 cut(s) 151, 535, 816
LweI GCATC 9 cut(s) 305, 415, 1153, 1189, 1794, 1972, 2129, 2344, 3002
MabI ACCWGGT 1 cut(s) 3019
MaeI CTAG 8 cut(s) 468, 1055, 1395, 1742, 2012, 2031, 2645, 3002
MaeII ACGT 2 cut(s) 694, 704
MaeIII GTNAC 8 cut(s) 757, 1183, 1305, 1458, 1733, 1914, 1940, 2987
MalI GATC 5 cut(s) 374, 2543, 2615, 2759, 2772
MboI GATC 5 cut(s) 372, 2541, 2613, 2757, 2770
MfeI CAATTG 2 cut(s) 1752, 1958
MflI RGATCY 2 cut(s) 2613, 2770
MhlI GDGCHC 1 cut(s) 2189
MlsI TGGCCA 1 cut(s) 2005
MluNI TGGCCA 1 cut(s) 2005
MlyI GAGTC 8 cut(s) 125, 250, 1121, 2234, 2295, 2351, 2727, 2901
MmeI TCCRAC 1 cut(s) 2547
Mox20I TGGCCA 1 cut(s) 2005
Mph1103I ATGCAT 4 cut(s) 519, 1666, 1787, 2359
MroI TCCGGA 1 cut(s) 2773
MroXI GAANNNNTTC 3 cut(s) 1384, 2518, 2847
MscI TGGCCA 1 cut(s) 2005
MslI CAYNNNNRTG 2 cut(s) 980, 1397
Msp20I TGGCCA 1 cut(s) 2005
MspI CCGG 2 cut(s) 1150, 2774
MspR9I CCNGG 3 cut(s) 1151, 2299, 3021
MunI CAATTG 2 cut(s) 1752, 1958
Mva1269I GAATGC 1 cut(s) 1047
MvaI CCWGG 2 cut(s) 2299, 3021
MwoI GCNNNNNNNGC 3 cut(s) 545, 781, 1208
NciI CCSGG 1 cut(s) 1151
NdeI CATATG 2 cut(s) 2249, 3065
NdeII GATC 5 cut(s) 372, 2541, 2613, 2757, 2770
NlaIV GGNNCC 5 cut(s) 797, 866, 1689, 2507, 2615
NmuCI GTSAC 4 cut(s) 1183, 1733, 1914, 2987
NsiI ATGCAT 4 cut(s) 519, 1666, 1787, 2359
NspI RCATGY 5 cut(s) 598, 1306, 1668, 1875, 2584
PaeI GCATGC 2 cut(s) 1668, 2584
PaeR7I CTCGAG 2 cut(s) 2234, 2378
PagI TCATGA 1 cut(s) 46
PasI CCCWGGG 1 cut(s) 2298
PceI AGGCCT 1 cut(s) 2567
PciI ACATGT 2 cut(s) 1302, 1871
PciSI GCTCTTC 2 cut(s) 1707, 2194
PctI GAATGC 1 cut(s) 1047
PdmI GAANNNNTTC 3 cut(s) 1384, 2518, 2847
PflMI CCANNNNNTGG 2 cut(s) 1451, 1744
PkrI GCNGC 4 cut(s) 166, 550, 831, 2723
PleI GAGTC 8 cut(s) 124, 249, 1120, 2233, 2294, 2350, 2727, 2901
PpsI GAGTC 8 cut(s) 124, 249, 1120, 2233, 2294, 2350, 2727, 2901
PpuMI RGGWCCY 2 cut(s) 796, 1133
PscI ACATGT 2 cut(s) 1302, 1871
PshBI ATTAAT 1 cut(s) 996
PsiI TTATAA 1 cut(s) 924
Psp1406I AACGTT 1 cut(s) 694
Psp5II RGGWCCY 2 cut(s) 796, 1133
Psp6I CCWGG 2 cut(s) 2297, 3019
PspFI CCCAGC 1 cut(s) 2870
PspGI CCWGG 2 cut(s) 2297, 3019
PspN4I GGNNCC 5 cut(s) 797, 866, 1689, 2507, 2615
PspPI GGNCC 3 cut(s) 796, 1133, 1209
PspPPI RGGWCCY 2 cut(s) 796, 1133
PsrI GAACNNNNNNTAC 2 cut(s) 1323, 1355
PstI CTGCAG 1 cut(s) 553
PsuI RGATCY 2 cut(s) 2613, 2770
RsaI GTAC 4 cut(s) 866, 1026, 1404, 2384
RsaNI GTAC 4 cut(s) 865, 1025, 1403, 2383
RseI CAYNNNNRTG 2 cut(s) 980, 1397
SapI GCTCTTC 2 cut(s) 1707, 2194
SatI GCNGC 4 cut(s) 165, 549, 830, 2722
Sau3AI GATC 5 cut(s) 372, 2541, 2613, 2757, 2770
Sau96I GGNCC 3 cut(s) 796, 1133, 1209
SchI GAGTC 8 cut(s) 125, 250, 1121, 2234, 2295, 2351, 2727, 2901
ScrFI CCNGG 3 cut(s) 1151, 2299, 3021
SduI GDGCHC 1 cut(s) 2189
SexAI ACCWGGT 1 cut(s) 3019
SfaNI GCATC 9 cut(s) 305, 415, 1153, 1189, 1794, 1972, 2129, 2344, 3002
SfcI CTRYAG 2 cut(s) 549, 1250
Sfr274I CTCGAG 2 cut(s) 2234, 2378
SinI GGWCC 2 cut(s) 796, 1133
SlaI CTCGAG 2 cut(s) 2234, 2378
SmiMI CAYNNNNRTG 2 cut(s) 980, 1397
SmlI CTYRAG 9 cut(s) 790, 1168, 1469, 2234, 2378, 2527, 2600, 2693, 2858
SmoI CTYRAG 9 cut(s) 790, 1168, 1469, 2234, 2378, 2527, 2600, 2693, 2858
SpeI ACTAGT 1 cut(s) 1741
SphI GCATGC 2 cut(s) 1668, 2584
SseBI AGGCCT 1 cut(s) 2567
SsiI CCGC 4 cut(s) 700, 1789, 2108, 2721
SspI AATATT 2 cut(s) 222, 2417
SspMI CTAG 8 cut(s) 468, 1055, 1395, 1742, 2012, 2031, 2645, 3002
StuI AGGCCT 1 cut(s) 2567
StyD4I CCNGG 3 cut(s) 1149, 2297, 3019
TaiI ACGT 2 cut(s) 697, 707
TaqI TCGA 5 cut(s) 625, 2065, 2235, 2379, 2841
TatI WGTACW 2 cut(s) 1024, 2382
TauI GCSGC 1 cut(s) 2724
TscAI CASTG 8 cut(s) 364, 535, 1114, 1259, 1357, 2973, 2996, 3003
TseFI GTSAC 4 cut(s) 1183, 1733, 1914, 2987
TseI GCWGC 3 cut(s) 164, 548, 829
Tsp45I GTSAC 4 cut(s) 1183, 1733, 1914, 2987
TspDTI ATGAA 9 cut(s) 11, 66, 366, 1377, 1471, 1557, 1695, 1866, 2181
TspGWI ACGGA 3 cut(s) 1765, 2975, 3084
TspRI CASTG 8 cut(s) 364, 535, 1114, 1259, 1357, 2973, 2996, 3003
Van91I CCANNNNNTGG 2 cut(s) 1451, 1744
VpaK11BI GGWCC 2 cut(s) 796, 1133
VspI ATTAAT 1 cut(s) 996
XagI CCTNNNNNAGG 1 cut(s) 2648
XapI RAATTY 4 cut(s) 353, 1362, 2146, 3084
XceI RCATGY 5 cut(s) 598, 1306, 1668, 1875, 2584
XcmI CCANNNNNNNNNTGG 1 cut(s) 2803
XhoI CTCGAG 2 cut(s) 2234, 2378
XmiI GTMKAC 2 cut(s) 421, 1809
XmnI GAANNNNTTC 3 cut(s) 1384, 2518, 2847
XspI CTAG 8 cut(s) 468, 1055, 1395, 1742, 2012, 2031, 2645, 3002
Zsp2I ATGCAT 4 cut(s) 519, 1666, 1787, 2359
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.