RchiOBHm_Chr1g0321481

disease resistance

Basic Information

Type: gene
Biological Identity
rosa_chinensis
1
Physical Location & Seq
Forward (+)
8991851 .. 8993819
1969 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ55153

Sequence Viewer

Length: 1569 bp
ATGGCAATAGGAGAGATATTTCTTGCGGCATTTATTGAGGTGCTGCTGAGCAGGTTGGTCTCTGGCGACTTTGTCAACTTCGCAACCCAAAAGGGGGTTGGCAGAAAGCTGGAGAAATGGAGGGAAACTTTGTCTACCATTGTGGCTGTGCTGTATGATGCAGAGGAGAAGCAACTAACGAGCAAGGCAGTGGAGCTATGGCTGGATGATCTCAAAGACTTGGCTTATGATGTGGAGGACATACTGGACAAGTTTTCCACTAAGATGTTACGACGCAAGGTCAAGCAGCAAAATCGGGCCGGCACAAGCAAGGTACGAGGGATCTTTTCTAAAGTTGCTAAAGTTAAATTCAACTTGAACATGAACTCTGAAATCGAGGAGATTGATGATCGGTTACTTCGTATATCTCAAAGGAAAAGCGACCTGGGGTTAATATATATTGAGCCTAGGTCCACTATGATGGGGCAAAGGTTGCCAAGTTCATATGTGCTTGATGGACCTGTAGTTGGAAGGGGTGAAGATAAAAAAACAATTCTTGAATTTTTGTTTAGATATCATGAGCCTTCGACCACCAGTTTTCACGTAGTTGCAATTGTTGGTATGCCAGGAATCGGCAAGACAACACTTGCAGGACATGTATTCACTGCAGTTAAGCAATTTAATCCCAAGGTGTGGGTATCTGTGTCTGATAACTTCAATCTTGAGAGGGTGACGAAAACAATTTATAAGTTGGTCACATCCCAACATTGTGATTTGGATGAGTTCTGTCAAGTTCAAGATAATTTGCGTGAGGCATTAGAAGGGAAAAGGTTTTTAATTGTTCTAGATGATGTGTGGACCACATGTGACTACAATTCATGGAGAAGTTTGCAGTCCACTTTTCATCTTGGAGCACAGGGAAGTAAGATAATTGTGACAACGCGGGATAAAGAAGTTGCAAAATTGATGGGAGCTACAGAAGTTTATGATTTGAAGACTCTGTCTGAGGAAGACTGTTGGCAGGTATTTCAGCAACATGTCAACAATGTCAAACCGCCGAGTTTTGAGTTAACTAAGAAAATCGTTAAAAATTGCGATGGATTGCCTTTGGCTGCGAAGACCCTTGGTGGTATTTTACGTTGTAAGGAAACTGACAAATGGGAGGAAGTATTGAATAATAGATTGTGGACTGTGTGTGATAATAGTGGCATTCTCCCAGTATTAAAATTGAGCTATCATTATCTCCCTTCAAGTTTGAAGAGGTGCTTTGCCTATTGCTCCATACTACCAAATGACTATGAATTCAAGAAAAAGCAGTTAATCCTTCTATGGATGGCAGAGGGTTTGCTTCAGCAATCAGAAGGAAGTACACAGATGGAAGATATTGGTGACAACTATTTTGTCGAGCTCTTATCTCGGTCACTATTTCAAAACTCAGGCAAGAACAATTCACGATATGTAATGCATGACCTTGTTGGAGATTTGGCACGATGGGCTGCTGGAGGCACGTTTTTCAGACTGCAGGATAAATGGGATGACATTGATTTTGAAAAGATGTTCTCATTTGAAGGCTCTACCGACGAACATTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

522

Amino Acids

59.7

Weight (kDa)

6.37

Isoelectric Point (pI)

42.53

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Rx_N PF18052 8 - 99 9.3e-23 Rx N-terminal domain
AAA_16 PF13191 168 - 234 7.3e-06 AAA ATPase domain
NB-ARC PF00931 175 - 342 2.3e-37 NB-ARC domain
WHD_DRP PF23559 421 - 489 2.1e-24 Disease resistance protein Winged helix domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000070)

Species Orthologous Gene IDs
fragaria_vesca FvH4_7g00360 FvH4_7g00850 FvH4_7g02400 FvH4_7g02430 FvH4_7g02450 FvH4_7g25671 FvH4_7g25680 FvH4_7g25683 FvH4_7g26980 FvH4_7g27330 FvH4_7g27355 FvH4_7g27610 FvH4_7g27642 FvH4_7g27890 FvH4_7g27891 FvH4_7g27891 FvH4_7g27891 FvH4_7g28110 FvH4_7g28390
malus_domestica MD00G1070800.v1.1 MD00G1168000.v1.1 MD00G1168300.v1.1 MD00G1168700.v1.1 MD02G1293100.v1.1 MD02G1293200.v1.1 MD02G1314300.v1.1 MD03G1009000.v1.1 MD03G1009400.v1.1 MD03G1042300.v1.1 MD03G1042400.v1.1 MD07G1033600.v1.1 MD07G1033700.v1.1 MD07G1033900.v1.1 MD11G1011400.v1.1 MD11G1011700.v1.1 MD11G1029800.v1.1 MD11G1029900.v1.1 MD11G1030300.v1.1 MD11G1030400.v1.1 MD11G1030500.v1.1 MD11G1031300.v1.1 MD11G1031600.v1.1 MD11G1032000.v1.1 MD11G1033200.v1.1 MD11G1033600.v1.1 MD11G1033800.v1.1 MD11G1033900.v1.1 MD11G1034100.v1.1 MD11G1034400.v1.1 MD11G1040600.v1.1 MD11G1041100.v1.1 MD11G1043100.v1.1 MD11G1043500.v1.1 MD11G1044500.v1.1 MD11G1045100.v1.1 MD11G1045600.v1.1
prunus_persica Prupe.2G022400_v2.0.a1 Prupe.2G022400_v2.0.a1 Prupe.2G022400_v2.0.a1 Prupe.2G022500_v2.0.a1 Prupe.2G022500_v2.0.a1 Prupe.2G022900_v2.0.a1 Prupe.2G023500_v2.0.a1 Prupe.2G023500_v2.0.a1 Prupe.2G023500_v2.0.a1 Prupe.2G023500_v2.0.a1 Prupe.2G023500_v2.0.a1 Prupe.2G023500_v2.0.a1 Prupe.2G023600_v2.0.a1 Prupe.2G028000_v2.0.a1 Prupe.2G030200_v2.0.a1 Prupe.2G067600_v2.0.a1 Prupe.8G117900_v2.0.a1
pyrus_communis pycom02g26350 pycom03g03270 pycom07g02370 pycom11g00750 pycom11g00790 pycom11g02340 pycom11g02370 pycom11g02380 pycom11g02390 pycom11g02410 pycom11g02460 pycom11g02470 pycom11g02500 pycom11g02510 pycom11g02520 pycom11g02530 pycom11g02580 pycom11g02590 pycom11g02680 pycom11g02710 pycom11g02720 pycom11g02730 pycom11g02750 pycom11g02760 pycom11g02770 pycom11g03690 pycom13g25120 pycom13g25130 pycom13g25140 pycom13g25170 pycom13g25180 pycom13g25190 pycom13g25210
rosa_chinensis RchiOBHm_Chr1g0315001 RchiOBHm_Chr1g0315411 RchiOBHm_Chr1g0317951 RchiOBHm_Chr1g0319741 RchiOBHm_Chr1g0319841 RchiOBHm_Chr1g0319911 RchiOBHm_Chr1g0319991 RchiOBHm_Chr1g0320001 RchiOBHm_Chr1g0320021 RchiOBHm_Chr1g0320081 RchiOBHm_Chr1g0320111 RchiOBHm_Chr1g0320131 RchiOBHm_Chr1g0320161 RchiOBHm_Chr1g0320171 RchiOBHm_Chr1g0320241 RchiOBHm_Chr1g0320281 RchiOBHm_Chr1g0320411 RchiOBHm_Chr1g0320461 RchiOBHm_Chr1g0320551 RchiOBHm_Chr1g0320581 RchiOBHm_Chr1g0320661 RchiOBHm_Chr1g0320891 RchiOBHm_Chr1g0320971 RchiOBHm_Chr1g0321021 RchiOBHm_Chr1g0321031 RchiOBHm_Chr1g0321091 RchiOBHm_Chr1g0321351 RchiOBHm_Chr1g0321481 RchiOBHm_Chr1g0321491 RchiOBHm_Chr1g0327521 RchiOBHm_Chr1g0328061 RchiOBHm_Chr1g0334991 RchiOBHm_Chr1g0373781 RchiOBHm_Chr1g0373891 RchiOBHm_Chr1g0374841 RchiOBHm_Chr2g0131111 RchiOBHm_Chr2g0131121 RchiOBHm_Chr4g0408901 RchiOBHm_Chr5g0041691 RchiOBHm_Chr7g0237021
rosa_laevigata RLG00000019168 RLG00000030456 RLG00000030460 RLG00000030571
rosa_multiflora Rmu_co7963468.1_g000001 Rmu_co7991248.1_g000001 Rmu_co8195256.1_g000001 Rmu_co8312199.1_g000001 Rmu_co8349215.1_g000001 Rmu_co8351041.1_g000001 Rmu_co8422719.1_g000001 Rmu_co8450711.1_g000001 Rmu_co8465555.1_g000001 Rmu_co8489965.1_g000001 Rmu_sc0000087.1_g000014 Rmu_sc0000272.1_g000015 Rmu_sc0000724.1_g000006 Rmu_sc0000724.1_g000021 Rmu_sc0000724.1_g000022 Rmu_sc0000861.1_g000024 Rmu_sc0001049.1_g000006 Rmu_sc0001049.1_g000007 Rmu_sc0001512.1_g000001 Rmu_sc0002022.1_g000004 Rmu_sc0002063.1_g000011 Rmu_sc0002131.1_g000024 Rmu_sc0002337.1_g000012 Rmu_sc0002341.1_g000005 Rmu_sc0002539.1_g000117 Rmu_sc0002745.1_g000005 Rmu_sc0002745.1_g000006 Rmu_sc0003145.1_g000002 Rmu_sc0003199.1_g000007 Rmu_sc0003270.1_g000039 Rmu_sc0003270.1_g000040 Rmu_sc0003423.1_g000001 Rmu_sc0003423.1_g000002 Rmu_sc0003629.1_g000067 Rmu_sc0004039.1_g000002 Rmu_sc0004555.1_g000001 Rmu_sc0004555.1_g000005 Rmu_sc0004555.1_g000006 Rmu_sc0004947.1_g000025 Rmu_sc0004947.1_g000026 Rmu_sc0005255.1_g000025 Rmu_sc0007977.1_g000016 Rmu_sc0008752.1_g000005 Rmu_sc0009236.1_g000004 Rmu_sc0009236.1_g000008 Rmu_sc0009236.1_g000009 Rmu_sc0009236.1_g000010 Rmu_sc0011424.1_g000036 Rmu_sc0013413.1_g000001 Rmu_sc0013735.1_g000002 Rmu_sc0015304.1_g000002 Rmu_sc0015304.1_g000003 Rmu_sc0015585.1_g000001 Rmu_sc0018410.1_g000001 Rmu_sc0022723.1_g000001 Rmu_sc0022723.1_g000002 Rmu_sc0022724.1_g000001 Rmu_sc0023430.1_g000001 Rmu_sc0026053.1_g000001 Rmu_sc0026429.1_g000002 Rmu_sc0026647.1_g000001 Rmu_sc0031359.1_g000001 Rmu_ssc0000042.1_g000040 Rmu_ssc0000081.1_g000001 Rmu_ssc0000300.1_g000011
rosa_roxburghii Rroxscaffold_160G00433620 Rroxscaffold_160G00433990 Rroxscaffold_1G00038820 Rroxscaffold_2G00113190 Rroxscaffold_4G00283240 Rroxscaffold_4G00283930 Rroxscaffold_4G00284010 Rroxscaffold_4G00322600 Rroxscaffold_4G00327710 Rroxscaffold_4G00328100 Rroxscaffold_4G00328130 Rroxscaffold_4G00331590 Rroxscaffold_5G00353280
rosa_rugosa Rorug01G0004200 Rorug01G0018800 Rorug01G0018900 Rorug01G0029900 Rorug01G0030000 Rorug01G0030000 Rorug01G0030000 Rorug01G0030200 Rorug01G0030300 Rorug01G0030800 Rorug01G0032400 Rorug01G0032900 Rorug01G0055800 Rorug01G0067600 Rorug01G0067700 Rorug01G0067800 Rorug01G0067900 Rorug01G0068000 Rorug01G0379500 Rorug01G0379600 Rorug01G0379600 Rorug01G0385200 Rorug01G0385300 Rorug02G0295100 Rorug04G0088500 Rorug04G0088600 Rorug05G0194900 Rorug07G0301400
rosa_samantha Rh1AG014800 Rh1AG015200 Rh1AG030500 Rh1AG041800 Rh1AG042300 Rh1AG042700 Rh1AG042800 Rh1AG042900 Rh1AG045000 Rh1AG085100 Rh1AG085200 Rh1AG388600 Rh1AG396700 Rh1AG396900 Rh1BG007300 Rh1BG039200 Rh1BG039600 Rh1BG042800 Rh1BG067300 Rh1BG109700 Rh1BG109900 Rh1BG354000 Rh1CG043800 Rh1CG044400 Rh1DG008600 Rh1DG022900 Rh1DG023400 Rh1DG023600 Rh1DG023900 Rh1DG024100 Rh1DG024400 Rh1DG024500 Rh1DG025500 Rh1DG025700 Rh1DG026500 Rh1DG026800 Rh1DG038900 Rh1DG048800 Rh1DG049300 Rh1DG051700 Rh1DG052000 Rh1DG146200 Rh1DG383500 Rh2BG354900 Rh2CG333600 Rh4BG149600 Rh4BG149700 Rh4CG160600
rosa_wichuraiana Rw0G001100 Rw0G001130 Rw0G001180 Rw0G012580 Rw1G003480 Rw1G003540 Rw1G003600 Rw1G003640 Rw1G003670 Rw1G003750 Rw1G003940 Rw1G006650 Rw1G034550 Rw1G034560 Rw1G034650 Rw1G034660 Rw1G035170 Rw1G035190 Rw1G037060 Rw2G028210 Rw4G012540 Rw5G026370 Rw7G037900

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 726
Acc36I ACCTGC 2 cut(s) 42, 991
AccB7I CCANNNNNTGG 1 cut(s) 672
AccI GTMKAC 1 cut(s) 134
AccII CGCG 1 cut(s) 922
AciI CCGC 3 cut(s) 26, 922, 1034
AclWI GGATC 1 cut(s) 329
AcsI RAATTY 3 cut(s) 347, 539, 1280
AcuI CTGAAG 1 cut(s) 1313
AfaI GTAC 2 cut(s) 315, 1348
AfiI CCNNNNNNNGG 5 cut(s) 93, 94, 506, 611, 672
AflIII ACRYGT 3 cut(s) 634, 842, 1015
AhdI GACNNNNNGTC 1 cut(s) 278
AjnI CCWGG 2 cut(s) 423, 604
AluBI AGCT 5 cut(s) 109, 196, 953, 1212, 1387
AluI AGCT 5 cut(s) 109, 196, 953, 1212, 1387
Alw21I GWGCWC 2 cut(s) 895, 1389
Alw26I GTCTC 1 cut(s) 64
AlwI GGATC 1 cut(s) 329
AoxI GGCC 1 cut(s) 297
ApeKI GCWGC 4 cut(s) 43, 286, 1091, 1475
ApoI RAATTY 3 cut(s) 347, 539, 1280
ArsI GACNNNNNNTTYG 4 cut(s) 1361, 1393, 1508, 1540
AspA2I CCTAGG 1 cut(s) 446
AspS9I GGNCC 4 cut(s) 297, 450, 497, 837
AsuHPI GGTGA 3 cut(s) 527, 721, 1379
AvaII GGWCC 3 cut(s) 450, 497, 837
AvrII CCTAGG 1 cut(s) 446
BanII GRGCYC 1 cut(s) 1389
BbsI GAAGAC 3 cut(s) 980, 996, 1103
Bbv12I GWGCWC 2 cut(s) 895, 1389
BbvI GCAGC 4 cut(s) 30, 298, 1078, 1462
BccI CCATC 7 cut(s) 454, 488, 940, 1070, 1306, 1348, 1464
BcgI CGANNNNNNTGC 2 cut(s) 275, 309
BciT130I CCWGG 2 cut(s) 425, 606
BcoDI GTCTC 1 cut(s) 64
BfaI CTAG 2 cut(s) 447, 824
BfmI CTRYAG 4 cut(s) 501, 645, 954, 1499
BfuAI ACCTGC 2 cut(s) 42, 991
BisI GCNGC 5 cut(s) 27, 44, 287, 1092, 1476
BlnI CCTAGG 1 cut(s) 446
BlpI GCTNAGC 1 cut(s) 47
BlsI GCNGC 5 cut(s) 28, 45, 288, 1093, 1477
Bme1390I CCNGG 2 cut(s) 425, 606
Bme18I GGWCC 3 cut(s) 450, 497, 837
BmeRI GACNNNNNGTC 1 cut(s) 278
BmgT120I GGNCC 4 cut(s) 297, 450, 497, 837
BmrFI CCNGG 2 cut(s) 425, 606
BmrI ACTGGG 1 cut(s) 1190
BmsI GCATC 1 cut(s) 148
BmuI ACTGGG 1 cut(s) 1190
BpiI GAAGAC 3 cut(s) 980, 996, 1103
BpmI CTGGAG 2 cut(s) 131, 1500
Bpu1102I GCTNAGC 1 cut(s) 47
BpuEI CTTGAG 1 cut(s) 722
BsaAI YACGTR 1 cut(s) 583
BsaI GGTCTC 1 cut(s) 64
BsaJI CCNNGG 4 cut(s) 424, 446, 666, 1102
Bsc4I CCNNNNNNNGG 5 cut(s) 93, 94, 506, 611, 672
Bse118I RCCGGY 1 cut(s) 299
Bse1I ACTGG 3 cut(s) 249, 573, 1196
BseBI CCWGG 2 cut(s) 425, 606
BseDI CCNNGG 4 cut(s) 424, 446, 666, 1102
BseGI GGATG 5 cut(s) 211, 737, 763, 1317, 1519
BseLI CCNNNNNNNGG 5 cut(s) 93, 94, 506, 611, 672
BseMII CTCAG 3 cut(s) 38, 975, 1428
BseNI ACTGG 3 cut(s) 249, 573, 1196
BseRI GAGGAG 2 cut(s) 179, 392
BseXI GCAGC 4 cut(s) 30, 298, 1078, 1462
Bsh1236I CGCG 1 cut(s) 922
BshFI GGCC 1 cut(s) 299
BsiHKAI GWGCWC 2 cut(s) 895, 1389
BsiSI CCGG 1 cut(s) 300
BslI CCNNNNNNNGG 5 cut(s) 93, 94, 506, 611, 672
BsmAI GTCTC 1 cut(s) 64
BsmI GAATGC 1 cut(s) 1188
BsnI GGCC 1 cut(s) 299
Bso31I GGTCTC 1 cut(s) 64
Bsp1286I GDGCHC 2 cut(s) 895, 1389
Bsp143I GATC 3 cut(s) 208, 321, 388
Bsp1720I GCTNAGC 1 cut(s) 47
BspACI CCGC 3 cut(s) 26, 922, 1034
BspANI GGCC 1 cut(s) 299
BspCNI CTCAG 3 cut(s) 39, 976, 1427
BspFNI CGCG 1 cut(s) 922
BspHI TCATGA 1 cut(s) 556
BspMAI CTGCAG 2 cut(s) 649, 1503
BspMI ACCTGC 2 cut(s) 42, 991
BspPI GGATC 1 cut(s) 329
BspTNI GGTCTC 1 cut(s) 64
BsrFI RCCGGY 1 cut(s) 299
BsrI ACTGG 3 cut(s) 249, 573, 1196
BssAI RCCGGY 1 cut(s) 299
BssECI CCNNGG 4 cut(s) 424, 446, 666, 1102
BssMI GATC 3 cut(s) 208, 321, 388
BssT1I CCWWGG 3 cut(s) 446, 666, 1102
Bst2UI CCWGG 2 cut(s) 425, 606
Bst4CI ACNGT 2 cut(s) 995, 1171
Bst6I CTCTTC 1 cut(s) 1232
BstAPI GCANNNNNTGC 1 cut(s) 472
BstBAI YACGTR 1 cut(s) 583
BstC8I GCNNGC 1 cut(s) 301
BstDEI CTNAG 5 cut(s) 47, 261, 984, 1053, 1414
BstF5I GGATG 5 cut(s) 211, 737, 763, 1317, 1519
BstFNI CGCG 1 cut(s) 922
BstKTI GATC 3 cut(s) 211, 324, 391
BstMAI GTCTC 1 cut(s) 64
BstMBI GATC 3 cut(s) 208, 321, 388
BstMWI GCNNNNNNNGC 2 cut(s) 472, 1472
BstNI CCWGG 2 cut(s) 425, 606
BstNSI RCATGY 3 cut(s) 638, 846, 1019
BstSCI CCNGG 2 cut(s) 423, 604
BstSFI CTRYAG 4 cut(s) 501, 645, 954, 1499
BstUI CGCG 1 cut(s) 922
BstV1I GCAGC 4 cut(s) 30, 298, 1078, 1462
BstV2I GAAGAC 3 cut(s) 980, 996, 1103
BstX2I RGATCY 1 cut(s) 321
BstXI CCANNNNNNTGG 1 cut(s) 460
BstYI RGATCY 1 cut(s) 321
BsuRI GGCC 1 cut(s) 299
BtgZI GCGATG 1 cut(s) 1089
BtsCI GGATG 5 cut(s) 211, 737, 763, 1317, 1519
BtsI GCAGTG 2 cut(s) 195, 642
BtsIMutI CAGTG 2 cut(s) 195, 642
BveI ACCTGC 2 cut(s) 42, 991
Cac8I GCNNGC 1 cut(s) 301
CciI TCATGA 1 cut(s) 556
Cfr10I RCCGGY 1 cut(s) 299
Cfr13I GGNCC 4 cut(s) 297, 450, 497, 837
CseI GACGC 1 cut(s) 282
Csp6I GTAC 2 cut(s) 314, 1347
CviAII CATG 7 cut(s) 361, 557, 635, 843, 858, 1016, 1445
CviQI GTAC 2 cut(s) 314, 1347
DdeI CTNAG 5 cut(s) 47, 261, 984, 1053, 1414
DpnI GATC 3 cut(s) 210, 323, 390
DpnII GATC 3 cut(s) 208, 321, 388
DriI GACNNNNNGTC 1 cut(s) 278
Eam1104I CTCTTC 1 cut(s) 1232
Eam1105I GACNNNNNGTC 1 cut(s) 278
EarI CTCTTC 1 cut(s) 1232
Ecl136II GAGCTC 1 cut(s) 1387
Eco130I CCWWGG 3 cut(s) 446, 666, 1102
Eco24I GRGCYC 1 cut(s) 1389
Eco31I GGTCTC 1 cut(s) 64
Eco32I GATATC 1 cut(s) 554
Eco47I GGWCC 3 cut(s) 450, 497, 837
Eco53kI GAGCTC 1 cut(s) 1387
Eco57I CTGAAG 1 cut(s) 1313
EcoICRI GAGCTC 1 cut(s) 1387
EcoRI GAATTC 1 cut(s) 1280
EcoRII CCWGG 2 cut(s) 423, 604
EcoRV GATATC 1 cut(s) 554
EcoT14I CCWWGG 3 cut(s) 446, 666, 1102
EcoT22I ATGCAT 1 cut(s) 1446
EcoT38I GRGCYC 1 cut(s) 1389
ErhI CCWWGG 3 cut(s) 446, 666, 1102
FaeI CATG 7 cut(s) 364, 560, 638, 846, 861, 1019, 1448
FalI AAGNNNNNCTT 2 cut(s) 1229, 1261
FatI CATG 7 cut(s) 360, 556, 634, 842, 857, 1015, 1444
FauI CCCGC 1 cut(s) 915
FauNDI CATATG 1 cut(s) 484
FblI GTMKAC 1 cut(s) 134
Fnu4HI GCNGC 5 cut(s) 27, 44, 287, 1092, 1476
FokI GGATG 5 cut(s) 218, 724, 770, 1324, 1526
FriOI GRGCYC 1 cut(s) 1389
Fsp4HI GCNGC 5 cut(s) 27, 44, 287, 1092, 1476
FspBI CTAG 2 cut(s) 447, 824
GluI GCNGC 5 cut(s) 27, 44, 287, 1092, 1476
GsuI CTGGAG 2 cut(s) 131, 1500
HaeIII GGCC 1 cut(s) 299
HapII CCGG 1 cut(s) 300
HgaI GACGC 1 cut(s) 282
Hin1II CATG 7 cut(s) 364, 560, 638, 846, 861, 1019, 1448
HincII GTYRAC 3 cut(s) 76, 1021, 1050
HindII GTYRAC 3 cut(s) 76, 1021, 1050
HinfI GANTC 2 cut(s) 609, 976
HpaI GTTAAC 1 cut(s) 1050
HpaII CCGG 1 cut(s) 300
HphI GGTGA 3 cut(s) 527, 721, 1379
Hpy166II GTNNAC 9 cut(s) 76, 135, 453, 837, 876, 1021, 1050, 1167, 1349
Hpy188I TCNGA 5 cut(s) 370, 688, 985, 1339, 1496
Hpy188III TCNNGA 7 cut(s) 536, 557, 701, 776, 824, 1285, 1431
Hpy8I GTNNAC 9 cut(s) 76, 135, 453, 837, 876, 1021, 1050, 1167, 1349
Hpy99I CGWCG 2 cut(s) 276, 1562
HpyAV CCTTC 7 cut(s) 504, 573, 794, 1236, 1313, 1334, 1541
HpyCH4III ACNGT 2 cut(s) 995, 1171
HpyCH4IV ACGT 3 cut(s) 582, 1117, 1487
HpyCH4V TGCA 8 cut(s) 161, 590, 629, 647, 871, 938, 1444, 1501
HpyF10VI GCNNNNNNNGC 2 cut(s) 472, 1472
HpyF3I CTNAG 5 cut(s) 47, 261, 984, 1053, 1414
HpySE526I ACGT 3 cut(s) 582, 1117, 1487
Hsp92II CATG 7 cut(s) 364, 560, 638, 846, 861, 1019, 1448
KroI GCCGGC 1 cut(s) 299
KroNI GCCGGC 1 cut(s) 301
KspAI GTTAAC 1 cut(s) 1050
Kzo9I GATC 3 cut(s) 208, 321, 388
LmnI GCTCC 4 cut(s) 193, 890, 950, 1262
Lsp1109I GCAGC 4 cut(s) 30, 298, 1078, 1462
LweI GCATC 1 cut(s) 148
MaeI CTAG 2 cut(s) 447, 824
MaeII ACGT 3 cut(s) 582, 1117, 1487
MaeIII GTNAC 8 cut(s) 267, 393, 709, 733, 845, 913, 1367, 1398
MalI GATC 3 cut(s) 210, 323, 390
MboI GATC 3 cut(s) 208, 321, 388
MboII GAAGA 6 cut(s) 530, 985, 1001, 1108, 1249, 1370
MfeI CAATTG 1 cut(s) 591
MflI RGATCY 1 cut(s) 321
MhlI GDGCHC 2 cut(s) 895, 1389
MlyI GAGTC 1 cut(s) 970
MmeI TCCRAC 2 cut(s) 487, 1435
Mph1103I ATGCAT 1 cut(s) 1446
MroNI GCCGGC 1 cut(s) 299
MseI TTAA 9 cut(s) 345, 431, 651, 660, 815, 1049, 1065, 1202, 1298
MslI CAYNNNNRTG 2 cut(s) 263, 458
MspI CCGG 1 cut(s) 300
MspR9I CCNGG 2 cut(s) 425, 606
MunI CAATTG 1 cut(s) 591
Mva1269I GAATGC 1 cut(s) 1188
MvaI CCWGG 2 cut(s) 425, 606
MvnI CGCG 1 cut(s) 922
MwoI GCNNNNNNNGC 2 cut(s) 472, 1472
NaeI GCCGGC 1 cut(s) 301
NdeI CATATG 1 cut(s) 484
NdeII GATC 3 cut(s) 208, 321, 388
NgoMIV GCCGGC 1 cut(s) 299
NlaIII CATG 7 cut(s) 364, 560, 638, 846, 861, 1019, 1448
NmeAIII GCCGAG 1 cut(s) 1062
NmuCI GTSAC 6 cut(s) 709, 733, 845, 913, 1367, 1398
NsiI ATGCAT 1 cut(s) 1446
NspI RCATGY 3 cut(s) 638, 846, 1019
PagI TCATGA 1 cut(s) 556
PciI ACATGT 3 cut(s) 634, 842, 1015
PcsI WCGNNNNNNNCGW 1 cut(s) 397
PctI GAATGC 1 cut(s) 1188
PdiI GCCGGC 1 cut(s) 301
PfeI GAWTC 1 cut(s) 609
PflFI GACNNNGTC 2 cut(s) 71, 979
PflMI CCANNNNNTGG 1 cut(s) 672
PkrI GCNGC 5 cut(s) 28, 45, 288, 1093, 1477
PleI GAGTC 1 cut(s) 970
PpsI GAGTC 1 cut(s) 970
Ppu21I YACGTR 1 cut(s) 583
PscI ACATGT 3 cut(s) 634, 842, 1015
PsiI TTATAA 1 cut(s) 726
Psp124BI GAGCTC 1 cut(s) 1389
Psp6I CCWGG 2 cut(s) 423, 604
PspGI CCWGG 2 cut(s) 423, 604
PspPI GGNCC 4 cut(s) 297, 450, 497, 837
PstI CTGCAG 2 cut(s) 649, 1503
PsuI RGATCY 1 cut(s) 321
PsyI GACNNNGTC 2 cut(s) 71, 979
RsaI GTAC 2 cut(s) 315, 1348
RsaNI GTAC 2 cut(s) 314, 1347
RseI CAYNNNNRTG 2 cut(s) 263, 458
SacI GAGCTC 1 cut(s) 1389
SaqAI TTAA 9 cut(s) 345, 431, 651, 660, 815, 1049, 1065, 1202, 1298
SatI GCNGC 5 cut(s) 27, 44, 287, 1092, 1476
Sau3AI GATC 3 cut(s) 208, 321, 388
Sau96I GGNCC 4 cut(s) 297, 450, 497, 837
SchI GAGTC 1 cut(s) 970
ScrFI CCNGG 2 cut(s) 425, 606
SduI GDGCHC 2 cut(s) 895, 1389
SfaNI GCATC 1 cut(s) 148
SfcI CTRYAG 4 cut(s) 501, 645, 954, 1499
SinI GGWCC 3 cut(s) 450, 497, 837
SmiMI CAYNNNNRTG 2 cut(s) 263, 458
SmlI CTYRAG 1 cut(s) 701
SmoI CTYRAG 1 cut(s) 701
SsiI CCGC 3 cut(s) 26, 922, 1034
SspMI CTAG 2 cut(s) 447, 824
SstI GAGCTC 1 cut(s) 1389
StyD4I CCNGG 2 cut(s) 423, 604
StyI CCWWGG 3 cut(s) 446, 666, 1102
TaaI ACNGT 2 cut(s) 995, 1171
TaiI ACGT 3 cut(s) 585, 1120, 1490
TaqI TCGA 3 cut(s) 375, 566, 1383
TaqII GACCGA 1 cut(s) 1386
TatI WGTACW 1 cut(s) 1346
TauI GCSGC 1 cut(s) 29
TfiI GAWTC 1 cut(s) 609
Tru1I TTAA 9 cut(s) 345, 431, 651, 660, 815, 1049, 1065, 1202, 1298
Tru9I TTAA 9 cut(s) 345, 431, 651, 660, 815, 1049, 1065, 1202, 1298
TscAI CASTG 2 cut(s) 195, 649
TseFI GTSAC 6 cut(s) 709, 733, 845, 913, 1367, 1398
TseI GCWGC 4 cut(s) 43, 286, 1091, 1475
Tsp45I GTSAC 6 cut(s) 709, 733, 845, 913, 1367, 1398
TspDTI ATGAA 5 cut(s) 377, 471, 846, 872, 1293
TspRI CASTG 2 cut(s) 195, 649
Tth111I GACNNNGTC 2 cut(s) 71, 979
Van91I CCANNNNNTGG 1 cut(s) 672
VpaK11BI GGWCC 3 cut(s) 450, 497, 837
XapI RAATTY 3 cut(s) 347, 539, 1280
XbaI TCTAGA 1 cut(s) 823
XceI RCATGY 3 cut(s) 638, 846, 1019
XcmI CCANNNNNNNNNTGG 1 cut(s) 95
XmaJI CCTAGG 1 cut(s) 446
XmiI GTMKAC 1 cut(s) 134
XspI CTAG 2 cut(s) 447, 824
Zsp2I ATGCAT 1 cut(s) 1446
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.