Rroxscaffold_160G00433620

disease resistance

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000160
Physical Location & Seq
Reverse (-)
127 .. 4412
4286 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_160G00433620.1

Sequence Viewer

Length: 1374 bp
ATGCCTCCCAAAGTAAGTCGGTTGACTCATCTGCAAACTTTGCCTAATTTTGTGGTGGGGAAAGGTAGTGCATCAGGGATTGGAGAGATACAGTCATTGCATCTTCGTGGGACCTTGAGCGTTGGAAGATTGGAAAATGTGATTGATGTTGGGGATGCGAAGAGGGCCCAAATAATGAACAAGGAAGGGCTAACTACCTTGCAATTGGAATGGAGCGGCACAAGTGAGAAGGAGTCGGAGGTGCTCTGCAGTTTAGAACCTCATAAAAAGCTTCTACAACTCACCATCAAGGGCTACAATGATTTCGAATTTTCAAAATGGATTGGACATCCTTCATTCTCTGATATGACGTTTGTGAAGTTAGAGAACTGTAAAAATTGTCGATTCTTACCTCCTCTTGGCCAATTACCTTCTCTGAAAAAACTTTATATAAATGGACTGGCCAATGTTGAAAGTGTGGGTGCTGAGTTTTATGGAGATTGTAGCTTGCCTTTTCCAGTGTTGGAAGCCCTGACGTTTAAGGACATGCAGAATTGGAAGGAGTGGCTTCCTTGCAAAAGAGATGAAGAAATTAGAGTTTTCTCATGCATGGAAAAGCTTTTAGTCCTTAGTTGCCCCAAATTGGAAGGTTGGTTGCCCAAGAACATGGATTCATTATCAATGCTGTGTATACAAGAATGTGAAGAGTTAGTGGTTTCAATTGCCAATTATAAAGATGTAAGTGTGTTGGCCATAAAAGGTTGTAAAAGGGTGGTGCACAGAAGTGGAGTTAAGTTTGAGTTACTGGAGAATATGGCGCTTGAAAGTATTCCAAAGTTCAGACTTGAAATAGATGGGTTCATTAGAGGATTAGCAAAGCTTCGAAGATTGTTGGTTACTGGTTGTGAAGAGTTGGCATATTTATGGGAGAATAATAAGGATAGGTGGCTGCAGCGTCGGATTTCTGACATTGTTGGAGACAACATTTCTCAGTCTCCCTCTCACTTTGTTCAACATCTTAGATCACTTGAACAGCTCGACATAATTGGATGCTCGGATCTAATTTCTTTTCCGGAGGTTGGTCTGCCACCTTCTCTTAAATACTTGAGGATTGAGTCATGTAATTCTTTGAAATGTTTCGTAAGGTTTCAGGTACCGCCAAGCATAAGAAAACTTGTGATAGCAAAATGTCAAAATTTGAAACTACTGATAGCATTAGTGATTGGGGAGCCAAAGTGTTGTCTGGAGTACTTGGAGATAAAAGAGTGTGAATCTTTGAGATCCTTATCACTCAACGGAGGCCGACCACCCAGAACGCTCAAATATCTTTATTTAAGTGACTGTGAACAATTGGGGTCAATAAGCGAAACATTCCACGATGACACCTGTGTTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

457

Amino Acids

51.73

Weight (kDa)

7.41

Isoelectric Point (pI)

49.06

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_R13L1-DRL21 PF25019 27 - 146 3e-32 R13L1/DRL21 LRRs
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0000070)

Species Orthologous Gene IDs
fragaria_vesca FvH4_7g00360 FvH4_7g00850 FvH4_7g02400 FvH4_7g02430 FvH4_7g02450 FvH4_7g25671 FvH4_7g25680 FvH4_7g25683 FvH4_7g26980 FvH4_7g27330 FvH4_7g27355 FvH4_7g27610 FvH4_7g27642 FvH4_7g27890 FvH4_7g27891 FvH4_7g27891 FvH4_7g27891 FvH4_7g28110 FvH4_7g28390
malus_domestica MD00G1070800.v1.1 MD00G1168000.v1.1 MD00G1168300.v1.1 MD00G1168700.v1.1 MD02G1293100.v1.1 MD02G1293200.v1.1 MD02G1314300.v1.1 MD03G1009000.v1.1 MD03G1009400.v1.1 MD03G1042300.v1.1 MD03G1042400.v1.1 MD07G1033600.v1.1 MD07G1033700.v1.1 MD07G1033900.v1.1 MD11G1011400.v1.1 MD11G1011700.v1.1 MD11G1029800.v1.1 MD11G1029900.v1.1 MD11G1030300.v1.1 MD11G1030400.v1.1 MD11G1030500.v1.1 MD11G1031300.v1.1 MD11G1031600.v1.1 MD11G1032000.v1.1 MD11G1033200.v1.1 MD11G1033600.v1.1 MD11G1033800.v1.1 MD11G1033900.v1.1 MD11G1034100.v1.1 MD11G1034400.v1.1 MD11G1040600.v1.1 MD11G1041100.v1.1 MD11G1043100.v1.1 MD11G1043500.v1.1 MD11G1044500.v1.1 MD11G1045100.v1.1 MD11G1045600.v1.1
prunus_persica Prupe.2G022400_v2.0.a1 Prupe.2G022400_v2.0.a1 Prupe.2G022400_v2.0.a1 Prupe.2G022500_v2.0.a1 Prupe.2G022500_v2.0.a1 Prupe.2G022900_v2.0.a1 Prupe.2G023500_v2.0.a1 Prupe.2G023500_v2.0.a1 Prupe.2G023500_v2.0.a1 Prupe.2G023500_v2.0.a1 Prupe.2G023500_v2.0.a1 Prupe.2G023500_v2.0.a1 Prupe.2G023600_v2.0.a1 Prupe.2G028000_v2.0.a1 Prupe.2G030200_v2.0.a1 Prupe.2G067600_v2.0.a1 Prupe.8G117900_v2.0.a1
pyrus_communis pycom02g26350 pycom03g03270 pycom07g02370 pycom11g00750 pycom11g00790 pycom11g02340 pycom11g02370 pycom11g02380 pycom11g02390 pycom11g02410 pycom11g02460 pycom11g02470 pycom11g02500 pycom11g02510 pycom11g02520 pycom11g02530 pycom11g02580 pycom11g02590 pycom11g02680 pycom11g02710 pycom11g02720 pycom11g02730 pycom11g02750 pycom11g02760 pycom11g02770 pycom11g03690 pycom13g25120 pycom13g25130 pycom13g25140 pycom13g25170 pycom13g25180 pycom13g25190 pycom13g25210
rosa_chinensis RchiOBHm_Chr1g0315001 RchiOBHm_Chr1g0315411 RchiOBHm_Chr1g0317951 RchiOBHm_Chr1g0319741 RchiOBHm_Chr1g0319841 RchiOBHm_Chr1g0319911 RchiOBHm_Chr1g0319991 RchiOBHm_Chr1g0320001 RchiOBHm_Chr1g0320021 RchiOBHm_Chr1g0320081 RchiOBHm_Chr1g0320111 RchiOBHm_Chr1g0320131 RchiOBHm_Chr1g0320161 RchiOBHm_Chr1g0320171 RchiOBHm_Chr1g0320241 RchiOBHm_Chr1g0320281 RchiOBHm_Chr1g0320411 RchiOBHm_Chr1g0320461 RchiOBHm_Chr1g0320551 RchiOBHm_Chr1g0320581 RchiOBHm_Chr1g0320661 RchiOBHm_Chr1g0320891 RchiOBHm_Chr1g0320971 RchiOBHm_Chr1g0321021 RchiOBHm_Chr1g0321031 RchiOBHm_Chr1g0321091 RchiOBHm_Chr1g0321351 RchiOBHm_Chr1g0321481 RchiOBHm_Chr1g0321491 RchiOBHm_Chr1g0327521 RchiOBHm_Chr1g0328061 RchiOBHm_Chr1g0334991 RchiOBHm_Chr1g0373781 RchiOBHm_Chr1g0373891 RchiOBHm_Chr1g0374841 RchiOBHm_Chr2g0131111 RchiOBHm_Chr2g0131121 RchiOBHm_Chr4g0408901 RchiOBHm_Chr5g0041691 RchiOBHm_Chr7g0237021
rosa_laevigata RLG00000019168 RLG00000030456 RLG00000030460 RLG00000030571
rosa_multiflora Rmu_co7963468.1_g000001 Rmu_co7991248.1_g000001 Rmu_co8195256.1_g000001 Rmu_co8312199.1_g000001 Rmu_co8349215.1_g000001 Rmu_co8351041.1_g000001 Rmu_co8422719.1_g000001 Rmu_co8450711.1_g000001 Rmu_co8465555.1_g000001 Rmu_co8489965.1_g000001 Rmu_sc0000087.1_g000014 Rmu_sc0000272.1_g000015 Rmu_sc0000724.1_g000006 Rmu_sc0000724.1_g000021 Rmu_sc0000724.1_g000022 Rmu_sc0000861.1_g000024 Rmu_sc0001049.1_g000006 Rmu_sc0001049.1_g000007 Rmu_sc0001512.1_g000001 Rmu_sc0002022.1_g000004 Rmu_sc0002063.1_g000011 Rmu_sc0002131.1_g000024 Rmu_sc0002337.1_g000012 Rmu_sc0002341.1_g000005 Rmu_sc0002539.1_g000117 Rmu_sc0002745.1_g000005 Rmu_sc0002745.1_g000006 Rmu_sc0003145.1_g000002 Rmu_sc0003199.1_g000007 Rmu_sc0003270.1_g000039 Rmu_sc0003270.1_g000040 Rmu_sc0003423.1_g000001 Rmu_sc0003423.1_g000002 Rmu_sc0003629.1_g000067 Rmu_sc0004039.1_g000002 Rmu_sc0004555.1_g000001 Rmu_sc0004555.1_g000005 Rmu_sc0004555.1_g000006 Rmu_sc0004947.1_g000025 Rmu_sc0004947.1_g000026 Rmu_sc0005255.1_g000025 Rmu_sc0007977.1_g000016 Rmu_sc0008752.1_g000005 Rmu_sc0009236.1_g000004 Rmu_sc0009236.1_g000008 Rmu_sc0009236.1_g000009 Rmu_sc0009236.1_g000010 Rmu_sc0011424.1_g000036 Rmu_sc0013413.1_g000001 Rmu_sc0013735.1_g000002 Rmu_sc0015304.1_g000002 Rmu_sc0015304.1_g000003 Rmu_sc0015585.1_g000001 Rmu_sc0018410.1_g000001 Rmu_sc0022723.1_g000001 Rmu_sc0022723.1_g000002 Rmu_sc0022724.1_g000001 Rmu_sc0023430.1_g000001 Rmu_sc0026053.1_g000001 Rmu_sc0026429.1_g000002 Rmu_sc0026647.1_g000001 Rmu_sc0031359.1_g000001 Rmu_ssc0000042.1_g000040 Rmu_ssc0000081.1_g000001 Rmu_ssc0000300.1_g000011
rosa_roxburghii Rroxscaffold_160G00433620 Rroxscaffold_160G00433990 Rroxscaffold_1G00038820 Rroxscaffold_2G00113190 Rroxscaffold_4G00283240 Rroxscaffold_4G00283930 Rroxscaffold_4G00284010 Rroxscaffold_4G00322600 Rroxscaffold_4G00327710 Rroxscaffold_4G00328100 Rroxscaffold_4G00328130 Rroxscaffold_4G00331590 Rroxscaffold_5G00353280
rosa_rugosa Rorug01G0004200 Rorug01G0018800 Rorug01G0018900 Rorug01G0029900 Rorug01G0030000 Rorug01G0030000 Rorug01G0030000 Rorug01G0030200 Rorug01G0030300 Rorug01G0030800 Rorug01G0032400 Rorug01G0032900 Rorug01G0055800 Rorug01G0067600 Rorug01G0067700 Rorug01G0067800 Rorug01G0067900 Rorug01G0068000 Rorug01G0379500 Rorug01G0379600 Rorug01G0379600 Rorug01G0385200 Rorug01G0385300 Rorug02G0295100 Rorug04G0088500 Rorug04G0088600 Rorug05G0194900 Rorug07G0301400
rosa_samantha Rh1AG014800 Rh1AG015200 Rh1AG030500 Rh1AG041800 Rh1AG042300 Rh1AG042700 Rh1AG042800 Rh1AG042900 Rh1AG045000 Rh1AG085100 Rh1AG085200 Rh1AG388600 Rh1AG396700 Rh1AG396900 Rh1BG007300 Rh1BG039200 Rh1BG039600 Rh1BG042800 Rh1BG067300 Rh1BG109700 Rh1BG109900 Rh1BG354000 Rh1CG043800 Rh1CG044400 Rh1DG008600 Rh1DG022900 Rh1DG023400 Rh1DG023600 Rh1DG023900 Rh1DG024100 Rh1DG024400 Rh1DG024500 Rh1DG025500 Rh1DG025700 Rh1DG026500 Rh1DG026800 Rh1DG038900 Rh1DG048800 Rh1DG049300 Rh1DG051700 Rh1DG052000 Rh1DG146200 Rh1DG383500 Rh2BG354900 Rh2CG333600 Rh4BG149600 Rh4BG149700 Rh4CG160600
rosa_wichuraiana Rw0G001100 Rw0G001130 Rw0G001180 Rw0G012580 Rw1G003480 Rw1G003540 Rw1G003600 Rw1G003640 Rw1G003670 Rw1G003750 Rw1G003940 Rw1G006650 Rw1G034550 Rw1G034560 Rw1G034650 Rw1G034660 Rw1G035170 Rw1G035190 Rw1G037060 Rw2G028210 Rw4G012540 Rw5G026370 Rw7G037900

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 711
Acc65I GGTACC 1 cut(s) 1132
AccB1I GGYRCC 1 cut(s) 1132
AccBSI CCGCTC 1 cut(s) 216
AccI GTMKAC 1 cut(s) 670
AccIII TCCGGA 1 cut(s) 1051
AciI CCGC 2 cut(s) 216, 1136
AclWI GGATC 2 cut(s) 1044, 1254
AcoI YGGCCR 3 cut(s) 400, 441, 729
AcsI RAATTY 2 cut(s) 308, 1174
AfaI GTAC 2 cut(s) 1134, 1229
AfiI CCNNNNNNNGG 3 cut(s) 398, 622, 1058
AgsI TTSAA 9 cut(s) 315, 452, 699, 803, 827, 992, 1010, 1111, 1180
AleI CACNNNNGTG 1 cut(s) 762
AluBI AGCT 5 cut(s) 271, 486, 598, 859, 1015
AluI AGCT 5 cut(s) 271, 486, 598, 859, 1015
Alw21I GWGCWC 2 cut(s) 246, 759
Alw26I GTCTC 2 cut(s) 951, 978
Alw44I GTGCAC 1 cut(s) 755
AlwI GGATC 2 cut(s) 1044, 1254
Aor13HI TCCGGA 1 cut(s) 1051
AoxI GGCC 5 cut(s) 165, 400, 441, 729, 1279
ApaI GGGCCC 1 cut(s) 169
ApaLI GTGCAC 1 cut(s) 755
ApeKI GCWGC 2 cut(s) 928, 931
ApoI RAATTY 2 cut(s) 308, 1174
Asp700I GAANNNNTTC 2 cut(s) 807, 1115
Asp718I GGTACC 1 cut(s) 1132
AspLEI GCGC 1 cut(s) 799
AspS9I GGNCC 3 cut(s) 111, 165, 166
AsuHPI GGTGA 1 cut(s) 274
AsuII TTCGAA 2 cut(s) 306, 862
AvaII GGWCC 1 cut(s) 111
BaeGI GKGCMC 2 cut(s) 169, 759
BalI TGGCCA 3 cut(s) 402, 443, 731
BanI GGYRCC 1 cut(s) 1132
BanII GRGCYC 1 cut(s) 169
Bbv12I GWGCWC 2 cut(s) 246, 759
BbvI GCAGC 2 cut(s) 915, 943
BccI CCATC 2 cut(s) 293, 827
BcoDI GTCTC 2 cut(s) 951, 978
BfmI CTRYAG 2 cut(s) 247, 929
BfoI RGCGCY 1 cut(s) 800
BisI GCNGC 3 cut(s) 217, 929, 932
BlsI GCNGC 3 cut(s) 218, 930, 933
BmcAI AGTACT 1 cut(s) 1229
Bme18I GGWCC 1 cut(s) 111
BmgT120I GGNCC 3 cut(s) 111, 165, 166
BmiI GGNNCC 4 cut(s) 112, 167, 1134, 1209
BmsI GCATC 4 cut(s) 80, 109, 145, 1019
BpmI CTGGAG 2 cut(s) 806, 1244
Bpu14I TTCGAA 2 cut(s) 306, 862
BpuEI CTTGAG 2 cut(s) 136, 1105
BsaBI GATNNNNATC 1 cut(s) 1264
BsaWI WCCGGW 1 cut(s) 1051
BsaXI ACNNNNNCTCC 2 cut(s) 1199, 1229
Bsc4I CCNNNNNNNGG 3 cut(s) 398, 622, 1058
Bse1I ACTGG 4 cut(s) 444, 497, 789, 883
Bse3DI GCAATG 1 cut(s) 95
Bse8I GATNNNNATC 1 cut(s) 1264
BseAI TCCGGA 1 cut(s) 1051
BseGI GGATG 3 cut(s) 160, 328, 1034
BseJI GATNNNNATC 1 cut(s) 1264
BseLI CCNNNNNNNGG 3 cut(s) 398, 622, 1058
BseMI GCAATG 1 cut(s) 95
BseMII CTCAG 2 cut(s) 456, 983
BseNI ACTGG 4 cut(s) 444, 497, 789, 883
BseRI GAGGAG 1 cut(s) 384
BseSI GKGCMC 2 cut(s) 169, 759
BseXI GCAGC 2 cut(s) 915, 943
BshFI GGCC 5 cut(s) 167, 402, 443, 731, 1281
BshNI GGYRCC 1 cut(s) 1132
BsiHKAI GWGCWC 2 cut(s) 246, 759
BsiSI CCGG 1 cut(s) 1052
BslFI GGGAC 1 cut(s) 124
BslI CCNNNNNNNGG 3 cut(s) 398, 622, 1058
BsmAI GTCTC 2 cut(s) 951, 978
BsmFI GGGAC 1 cut(s) 124
BsnI GGCC 5 cut(s) 167, 402, 443, 731, 1281
Bsp119I TTCGAA 2 cut(s) 306, 862
Bsp120I GGGCCC 1 cut(s) 165
Bsp1286I GDGCHC 3 cut(s) 169, 246, 759
Bsp13I TCCGGA 1 cut(s) 1051
Bsp143I GATC 3 cut(s) 1001, 1036, 1259
BspACI CCGC 2 cut(s) 216, 1136
BspANI GGCC 5 cut(s) 167, 402, 443, 731, 1281
BspCNI CTCAG 2 cut(s) 457, 982
BspEI TCCGGA 1 cut(s) 1051
BspLI GGNNCC 4 cut(s) 112, 167, 1134, 1209
BspMAI CTGCAG 2 cut(s) 251, 933
BspPI GGATC 2 cut(s) 1044, 1254
BspT104I TTCGAA 2 cut(s) 306, 862
BspT107I GGYRCC 1 cut(s) 1132
BsrBI CCGCTC 1 cut(s) 216
BsrDI GCAATG 1 cut(s) 95
BsrI ACTGG 4 cut(s) 444, 497, 789, 883
BssMI GATC 3 cut(s) 1001, 1036, 1259
BssNAI GTATAC 1 cut(s) 671
Bst1107I GTATAC 1 cut(s) 671
Bst4CI ACNGT 3 cut(s) 93, 371, 1322
Bst6I CTCTTC 3 cut(s) 155, 678, 882
BstAPI GCANNNNNTGC 1 cut(s) 40
BstBI TTCGAA 2 cut(s) 306, 862
BstC8I GCNNGC 1 cut(s) 488
BstDEI CTNAG 4 cut(s) 465, 608, 969, 998
BstF5I GGATG 3 cut(s) 160, 328, 1034
BstH2I RGCGCY 1 cut(s) 800
BstHHI GCGC 1 cut(s) 799
BstKTI GATC 3 cut(s) 1004, 1039, 1262
BstMAI GTCTC 2 cut(s) 951, 978
BstMBI GATC 3 cut(s) 1001, 1036, 1259
BstMWI GCNNNNNNNGC 2 cut(s) 40, 164
BstNSI RCATGY 1 cut(s) 529
BstSFI CTRYAG 2 cut(s) 247, 929
BstSLI GKGCMC 2 cut(s) 169, 759
BstV1I GCAGC 2 cut(s) 915, 943
BstX2I RGATCY 2 cut(s) 1036, 1259
BstXI CCANNNNNNTGG 1 cut(s) 646
BstYI RGATCY 2 cut(s) 1036, 1259
BstZ17I GTATAC 1 cut(s) 671
BsuRI GGCC 5 cut(s) 167, 402, 443, 731, 1281
BtsCI GGATG 3 cut(s) 160, 328, 1034
BtsIMutI CAGTG 1 cut(s) 504
Cac8I GCNNGC 1 cut(s) 488
CfoI GCGC 1 cut(s) 799
Cfr13I GGNCC 3 cut(s) 111, 165, 166
CseI GACGC 1 cut(s) 923
Csp6I GTAC 2 cut(s) 1133, 1228
CviAII CATG 5 cut(s) 526, 585, 589, 646, 1098
CviQI GTAC 2 cut(s) 1133, 1228
DdeI CTNAG 4 cut(s) 465, 608, 969, 998
DpnI GATC 3 cut(s) 1003, 1038, 1261
DpnII GATC 3 cut(s) 1001, 1036, 1259
EaeI YGGCCR 3 cut(s) 400, 441, 729
Eam1104I CTCTTC 3 cut(s) 155, 678, 882
EarI CTCTTC 3 cut(s) 155, 678, 882
Eco24I GRGCYC 1 cut(s) 169
Eco47I GGWCC 1 cut(s) 111
EcoO109I RGGNCCY 2 cut(s) 111, 165
EcoT22I ATGCAT 1 cut(s) 590
EcoT38I GRGCYC 1 cut(s) 169
FaeI CATG 5 cut(s) 529, 588, 592, 649, 1101
FaqI GGGAC 1 cut(s) 124
FatI CATG 5 cut(s) 525, 584, 588, 645, 1097
FblI GTMKAC 1 cut(s) 670
Fnu4HI GCNGC 3 cut(s) 217, 929, 932
FokI GGATG 3 cut(s) 167, 315, 1041
FriOI GRGCYC 1 cut(s) 169
Fsp4HI GCNGC 3 cut(s) 217, 929, 932
GlaI GCGC 1 cut(s) 798
GluI GCNGC 3 cut(s) 217, 929, 932
GsuI CTGGAG 2 cut(s) 806, 1244
HaeII RGCGCY 1 cut(s) 800
HaeIII GGCC 5 cut(s) 167, 402, 443, 731, 1281
HapII CCGG 1 cut(s) 1052
HgaI GACGC 1 cut(s) 923
HhaI GCGC 1 cut(s) 799
Hin1II CATG 5 cut(s) 529, 588, 592, 649, 1101
Hin6I GCGC 1 cut(s) 797
HinP1I GCGC 1 cut(s) 797
HincII GTYRAC 1 cut(s) 24
HindII GTYRAC 1 cut(s) 24
HindIII AAGCTT 3 cut(s) 269, 596, 857
HinfI GANTC 6 cut(s) 25, 233, 384, 650, 1094, 1250
HpaII CCGG 1 cut(s) 1052
HphI GGTGA 1 cut(s) 274
Hpy166II GTNNAC 4 cut(s) 24, 671, 757, 1325
Hpy188I TCNGA 7 cut(s) 238, 343, 417, 821, 939, 946, 1036
Hpy188III TCNNGA 2 cut(s) 1052, 1223
Hpy8I GTNNAC 4 cut(s) 24, 671, 757, 1325
Hpy99I CGWCG 1 cut(s) 939
HpyAV CCTTC 7 cut(s) 179, 223, 342, 420, 532, 620, 1080
HpyCH4III ACNGT 3 cut(s) 93, 371, 1322
HpyCH4IV ACGT 2 cut(s) 350, 515
HpyF10VI GCNNNNNNNGC 2 cut(s) 40, 164
HpyF3I CTNAG 4 cut(s) 465, 608, 969, 998
HpySE526I ACGT 2 cut(s) 350, 515
Hsp92II CATG 5 cut(s) 529, 588, 592, 649, 1101
HspAI GCGC 1 cut(s) 797
Kpn2I TCCGGA 1 cut(s) 1051
KpnI GGTACC 1 cut(s) 1136
Kzo9I GATC 3 cut(s) 1001, 1036, 1259
LmnI GCTCC 2 cut(s) 213, 1207
Lsp1109I GCAGC 2 cut(s) 915, 943
LweI GCATC 4 cut(s) 80, 109, 145, 1019
MaeII ACGT 2 cut(s) 350, 515
MaeIII GTNAC 3 cut(s) 780, 874, 1316
MalI GATC 3 cut(s) 1003, 1038, 1261
MbiI CCGCTC 1 cut(s) 216
MboI GATC 3 cut(s) 1001, 1036, 1259
MboII GAAGA 7 cut(s) 95, 138, 172, 578, 695, 876, 899
MfeI CAATTG 3 cut(s) 203, 699, 1328
MflI RGATCY 2 cut(s) 1036, 1259
MhlI GDGCHC 3 cut(s) 169, 246, 759
MlsI TGGCCA 3 cut(s) 402, 443, 731
MluNI TGGCCA 3 cut(s) 402, 443, 731
MlyI GAGTC 3 cut(s) 19, 242, 1103
MmeI TCCRAC 5 cut(s) 103, 216, 483, 917, 934
Mox20I TGGCCA 3 cut(s) 402, 443, 731
Mph1103I ATGCAT 1 cut(s) 590
MroI TCCGGA 1 cut(s) 1051
MroXI GAANNNNTTC 2 cut(s) 807, 1115
MscI TGGCCA 3 cut(s) 402, 443, 731
MseI TTAA 4 cut(s) 519, 771, 1077, 1313
MslI CAYNNNNRTG 3 cut(s) 105, 762, 901
Msp20I TGGCCA 3 cut(s) 402, 443, 731
MspI CCGG 1 cut(s) 1052
MunI CAATTG 3 cut(s) 203, 699, 1328
MwoI GCNNNNNNNGC 2 cut(s) 40, 164
NdeII GATC 3 cut(s) 1001, 1036, 1259
NlaIII CATG 5 cut(s) 529, 588, 592, 649, 1101
NlaIV GGNNCC 4 cut(s) 112, 167, 1134, 1209
NmuCI GTSAC 1 cut(s) 1316
NsiI ATGCAT 1 cut(s) 590
NspI RCATGY 1 cut(s) 529
NspV TTCGAA 2 cut(s) 306, 862
OliI CACNNNNGTG 1 cut(s) 762
PdmI GAANNNNTTC 2 cut(s) 807, 1115
PfeI GAWTC 3 cut(s) 384, 650, 1250
PkrI GCNGC 3 cut(s) 218, 930, 933
PleI GAGTC 3 cut(s) 19, 241, 1102
PpsI GAGTC 3 cut(s) 19, 241, 1102
PpuMI RGGWCCY 1 cut(s) 111
PsiI TTATAA 1 cut(s) 711
Psp5II RGGWCCY 1 cut(s) 111
PspN4I GGNNCC 4 cut(s) 112, 167, 1134, 1209
PspOMI GGGCCC 1 cut(s) 165
PspPI GGNCC 3 cut(s) 111, 165, 166
PspPPI RGGWCCY 1 cut(s) 111
PstI CTGCAG 2 cut(s) 251, 933
PsuI RGATCY 2 cut(s) 1036, 1259
RsaI GTAC 2 cut(s) 1134, 1229
RsaNI GTAC 2 cut(s) 1133, 1228
RseI CAYNNNNRTG 3 cut(s) 105, 762, 901
SaqAI TTAA 4 cut(s) 519, 771, 1077, 1313
SatI GCNGC 3 cut(s) 217, 929, 932
Sau3AI GATC 3 cut(s) 1001, 1036, 1259
Sau96I GGNCC 3 cut(s) 111, 165, 166
ScaI AGTACT 1 cut(s) 1229
SchI GAGTC 3 cut(s) 19, 242, 1103
SduI GDGCHC 3 cut(s) 169, 246, 759
SfaNI GCATC 4 cut(s) 80, 109, 145, 1019
SfcI CTRYAG 2 cut(s) 247, 929
SfuI TTCGAA 2 cut(s) 306, 862
SinI GGWCC 1 cut(s) 111
SmiMI CAYNNNNRTG 3 cut(s) 105, 762, 901
SmlI CTYRAG 2 cut(s) 115, 1084
SmoI CTYRAG 2 cut(s) 115, 1084
SsiI CCGC 2 cut(s) 216, 1136
TaaI ACNGT 3 cut(s) 93, 371, 1322
TaiI ACGT 2 cut(s) 353, 518
TaqI TCGA 4 cut(s) 306, 382, 862, 1017
TatI WGTACW 1 cut(s) 1227
TauI GCSGC 1 cut(s) 219
TfiI GAWTC 3 cut(s) 384, 650, 1250
Tru1I TTAA 4 cut(s) 519, 771, 1077, 1313
Tru9I TTAA 4 cut(s) 519, 771, 1077, 1313
TscAI CASTG 1 cut(s) 504
TseFI GTSAC 1 cut(s) 1316
TseI GCWGC 2 cut(s) 928, 931
Tsp45I GTSAC 1 cut(s) 1316
TspDTI ATGAA 5 cut(s) 191, 324, 579, 642, 829
TspGWI ACGGA 1 cut(s) 1290
TspRI CASTG 1 cut(s) 504
VneI GTGCAC 1 cut(s) 755
VpaK11BI GGWCC 1 cut(s) 111
XapI RAATTY 2 cut(s) 308, 1174
XceI RCATGY 1 cut(s) 529
XmiI GTMKAC 1 cut(s) 670
XmnI GAANNNNTTC 2 cut(s) 807, 1115
ZrmI AGTACT 1 cut(s) 1229
Zsp2I ATGCAT 1 cut(s) 590
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.