disease resistance
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Rx_N | PF18052 | 2 - 58 | 8.1e-15 | Rx N-terminal domain |
| NB-ARC | PF00931 | 147 - 300 | 1.3e-34 | NB-ARC domain |
| WHD_DRP | PF23559 | 383 - 452 | 2.3e-23 | Disease resistance protein Winged helix domain |
| LRR_14 | PF23598 | 526 - 794 | 3.5e-23 | Leucine-rich repeat region |
| LRR_R13L1-DRL21 | PF25019 | 644 - 767 | 8.3e-35 | R13L1/DRL21 LRRs |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 2 cut(s) | 1545, 4052 |
| AarI | CACCTGC | 1 cut(s) | 3766 |
| Acc36I | ACCTGC | 1 cut(s) | 3766 |
| Acc65I | GGTACC | 1 cut(s) | 2944 |
| AccB1I | GGYRCC | 2 cut(s) | 2472, 2944 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 2258, 2469 |
| AccI | GTMKAC | 2 cut(s) | 1017, 3304 |
| AccII | CGCG | 1 cut(s) | 758 |
| AccIII | TCCGGA | 1 cut(s) | 3019 |
| AciI | CCGC | 7 cut(s) | 20, 35, 756, 1217, 1513, 2306, 3618 |
| AclWI | GGATC | 7 cut(s) | 197, 1180, 1927, 2183, 2362, 3725, 3728 |
| AcoI | YGGCCR | 2 cut(s) | 3485, 4040 |
| AcuI | CTGAAG | 2 cut(s) | 164, 3410 |
| AcvI | CACGTG | 1 cut(s) | 803 |
| AfaI | GTAC | 7 cut(s) | 430, 472, 1605, 1831, 2629, 2946, 4032 |
| AfeI | AGCGCT | 1 cut(s) | 1776 |
| AfiI | CCNNNNNNNGG | 9 cut(s) | 368, 583, 2258, 2469, 2482, 2941, 3026, 3705, 3926 |
| AflII | CTTAAG | 2 cut(s) | 1597, 3287 |
| AflIII | ACRYGT | 4 cut(s) | 505, 800, 1832, 2759 |
| AjiI | CACGTC | 1 cut(s) | 615 |
| AjnI | CCWGG | 3 cut(s) | 3269, 3736, 4024 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 273, 305 |
| Alw21I | GWGCWC | 2 cut(s) | 645, 2142 |
| Alw26I | GTCTC | 8 cut(s) | 230, 825, 2083, 2690, 3209, 3488, 3537, 4050 |
| AlwI | GGATC | 7 cut(s) | 197, 1180, 1927, 2183, 2362, 3725, 3728 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 2890 |
| Ama87I | CYCGRG | 1 cut(s) | 3206 |
| Aor13HI | TCCGGA | 1 cut(s) | 3019 |
| Aor51HI | AGCGCT | 1 cut(s) | 1776 |
| AoxI | GGCC | 4 cut(s) | 2836, 3485, 4004, 4040 |
| ApeKI | GCWGC | 6 cut(s) | 977, 1219, 1364, 1636, 2093, 3787 |
| AseI | ATTAAT | 1 cut(s) | 1875 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 3882 |
| Asp718I | GGTACC | 1 cut(s) | 2944 |
| AspLEI | GCGC | 2 cut(s) | 1777, 3667 |
| AspS9I | GGNCC | 2 cut(s) | 359, 4005 |
| AsuII | TTCGAA | 1 cut(s) | 1115 |
| AvaI | CYCGRG | 1 cut(s) | 3206 |
| AvaII | GGWCC | 1 cut(s) | 359 |
| AxyI | CCTNAGG | 1 cut(s) | 3399 |
| BaeGI | GKGCMC | 1 cut(s) | 2477 |
| BalI | TGGCCA | 1 cut(s) | 3487 |
| BanI | GGYRCC | 2 cut(s) | 2472, 2944 |
| BanII | GRGCYC | 3 cut(s) | 645, 2142, 3277 |
| BarI | GAAGNNNNNNTAC | 4 cut(s) | 1020, 1052, 2037, 2069 |
| BauI | CACGAG | 1 cut(s) | 3489 |
| BbrPI | CACGTG | 1 cut(s) | 803 |
| BbsI | GAAGAC | 6 cut(s) | 117, 494, 2058, 2400, 2832, 3875 |
| Bbv12I | GWGCWC | 2 cut(s) | 645, 2142 |
| BbvI | GCAGC | 6 cut(s) | 964, 1231, 1351, 1623, 2105, 3774 |
| BceAI | ACGGC | 2 cut(s) | 489, 955 |
| BciT130I | CCWGG | 3 cut(s) | 3271, 3738, 4026 |
| BclI | TGATCA | 2 cut(s) | 733, 2233 |
| BcoDI | GTCTC | 8 cut(s) | 230, 825, 2083, 2690, 3209, 3488, 3537, 4050 |
| BfmI | CTRYAG | 1 cut(s) | 1365 |
| BfoI | RGCGCY | 2 cut(s) | 1778, 3668 |
| BfrI | CTTAAG | 2 cut(s) | 1597, 3287 |
| BfuAI | ACCTGC | 1 cut(s) | 3766 |
| BglII | AGATCT | 1 cut(s) | 3797 |
| BisI | GCNGC | 6 cut(s) | 978, 1220, 1365, 1637, 2094, 3788 |
| BlsI | GCNGC | 6 cut(s) | 979, 1221, 1366, 1638, 2095, 3789 |
| BmcAI | AGTACT | 1 cut(s) | 1605 |
| Bme1390I | CCNGG | 3 cut(s) | 3271, 3738, 4026 |
| Bme18I | GGWCC | 1 cut(s) | 359 |
| BmeT110I | CYCGRG | 1 cut(s) | 3206 |
| BmgBI | CACGTC | 1 cut(s) | 615 |
| BmgT120I | GGNCC | 2 cut(s) | 359, 4005 |
| BmiI | GGNNCC | 3 cut(s) | 2474, 2946, 3332 |
| BmrFI | CCNGG | 3 cut(s) | 3271, 3738, 4026 |
| BpiI | GAAGAC | 6 cut(s) | 117, 494, 2058, 2400, 2832, 3875 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 632, 664 |
| BpmI | CTGGAG | 1 cut(s) | 3332 |
| Bpu14I | TTCGAA | 1 cut(s) | 1115 |
| BpuEI | CTTGAG | 1 cut(s) | 2345 |
| Bsa29I | ATCGAT | 1 cut(s) | 3224 |
| BsaAI | YACGTR | 1 cut(s) | 803 |
| BsaBI | GATNNNNATC | 2 cut(s) | 1073, 2232 |
| BsaI | GGTCTC | 1 cut(s) | 230 |
| BsaJI | CCNNGG | 7 cut(s) | 323, 1431, 2149, 3269, 3270, 4024, 4025 |
| BsaWI | WCCGGW | 2 cut(s) | 2497, 3019 |
| BsaXI | ACNNNNNCTCC | 3 cut(s) | 845, 875, 4052 |
| Bsc4I | CCNNNNNNNGG | 9 cut(s) | 368, 583, 2258, 2469, 2482, 2941, 3026, 3705, 3926 |
| Bse118I | RCCGGY | 2 cut(s) | 4002, 4042 |
| Bse1I | ACTGG | 2 cut(s) | 2399, 2895 |
| Bse21I | CCTNAGG | 1 cut(s) | 3399 |
| Bse3DI | GCAATG | 3 cut(s) | 746, 1886, 1964 |
| Bse8I | GATNNNNATC | 2 cut(s) | 1073, 2232 |
| BseAI | TCCGGA | 1 cut(s) | 3019 |
| BseBI | CCWGG | 3 cut(s) | 3271, 3738, 4026 |
| BseCI | ATCGAT | 1 cut(s) | 3224 |
| BseDI | CCNNGG | 7 cut(s) | 323, 1431, 2149, 3269, 3270, 4024, 4025 |
| BseJI | GATNNNNATC | 2 cut(s) | 1073, 2232 |
| BseLI | CCNNNNNNNGG | 9 cut(s) | 368, 583, 2258, 2469, 2482, 2941, 3026, 3705, 3926 |
| BseMI | GCAATG | 3 cut(s) | 746, 1886, 1964 |
| BseMII | CTCAG | 9 cut(s) | 17, 77, 246, 663, 1706, 3315, 3390, 3530, 3753 |
| BseNI | ACTGG | 2 cut(s) | 2399, 2895 |
| BseRI | GAGGAG | 5 cut(s) | 53, 1845, 2765, 3182, 4060 |
| BseSI | GKGCMC | 1 cut(s) | 2477 |
| BseXI | GCAGC | 6 cut(s) | 964, 1231, 1351, 1623, 2105, 3774 |
| BseYI | CCCAGC | 1 cut(s) | 1359 |
| Bsh1236I | CGCG | 1 cut(s) | 758 |
| BshFI | GGCC | 4 cut(s) | 2838, 3487, 4006, 4042 |
| BshNI | GGYRCC | 2 cut(s) | 2472, 2944 |
| BshVI | ATCGAT | 1 cut(s) | 3224 |
| BsiHKAI | GWGCWC | 2 cut(s) | 645, 2142 |
| BsiHKCI | CYCGRG | 1 cut(s) | 3206 |
| BsiSI | CCGG | 4 cut(s) | 2498, 3020, 4003, 4043 |
| BslFI | GGGAC | 4 cut(s) | 1975, 3417, 3942, 4008 |
| BslI | CCNNNNNNNGG | 9 cut(s) | 368, 583, 2258, 2469, 2482, 2941, 3026, 3705, 3926 |
| BsmAI | GTCTC | 8 cut(s) | 230, 825, 2083, 2690, 3209, 3488, 3537, 4050 |
| BsmBI | CGTCTC | 2 cut(s) | 2690, 3488 |
| BsmFI | GGGAC | 4 cut(s) | 1975, 3417, 3942, 4008 |
| BsnI | GGCC | 4 cut(s) | 2838, 3487, 4006, 4042 |
| Bso31I | GGTCTC | 1 cut(s) | 230 |
| BsoBI | CYCGRG | 1 cut(s) | 3206 |
| Bsp119I | TTCGAA | 1 cut(s) | 1115 |
| Bsp1286I | GDGCHC | 4 cut(s) | 645, 2142, 2477, 3277 |
| Bsp13I | TCCGGA | 1 cut(s) | 3019 |
| Bsp19I | CCATGG | 1 cut(s) | 323 |
| BspACI | CCGC | 7 cut(s) | 20, 35, 756, 1217, 1513, 2306, 3618 |
| BspANI | GGCC | 4 cut(s) | 2838, 3487, 4006, 4042 |
| BspCNI | CTCAG | 9 cut(s) | 18, 78, 245, 662, 1705, 3316, 3391, 3531, 3754 |
| BspDI | ATCGAT | 1 cut(s) | 3224 |
| BspEI | TCCGGA | 1 cut(s) | 3019 |
| BspFNI | CGCG | 1 cut(s) | 758 |
| BspHI | TCATGA | 2 cut(s) | 2581, 3961 |
| BspLI | GGNNCC | 3 cut(s) | 2474, 2946, 3332 |
| BspMAI | CTGCAG | 1 cut(s) | 1369 |
| BspMI | ACCTGC | 1 cut(s) | 3766 |
| BspPI | GGATC | 7 cut(s) | 197, 1180, 1927, 2183, 2362, 3725, 3728 |
| BspQI | GCTCTTC | 1 cut(s) | 1626 |
| BspT104I | TTCGAA | 1 cut(s) | 1115 |
| BspT107I | GGYRCC | 2 cut(s) | 2472, 2944 |
| BspTI | CTTAAG | 2 cut(s) | 1597, 3287 |
| BspTNI | GGTCTC | 1 cut(s) | 230 |
| BsrDI | GCAATG | 3 cut(s) | 746, 1886, 1964 |
| BsrFI | RCCGGY | 2 cut(s) | 4002, 4042 |
| BsrI | ACTGG | 2 cut(s) | 2399, 2895 |
| BssAI | RCCGGY | 2 cut(s) | 4002, 4042 |
| BssECI | CCNNGG | 7 cut(s) | 323, 1431, 2149, 3269, 3270, 4024, 4025 |
| BssSI | CACGAG | 1 cut(s) | 3489 |
| BssT1I | CCWWGG | 3 cut(s) | 323, 1431, 2149 |
| Bst2BI | CACGAG | 1 cut(s) | 3489 |
| Bst2UI | CCWGG | 3 cut(s) | 3271, 3738, 4026 |
| Bst4CI | ACNGT | 9 cut(s) | 72, 288, 534, 1128, 1671, 2632, 3408, 3590, 3899 |
| Bst6I | CTCTTC | 4 cut(s) | 258, 1626, 2979, 3975 |
| BstAFI | CTTAAG | 2 cut(s) | 1597, 3287 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 2875 |
| BstBAI | YACGTR | 1 cut(s) | 803 |
| BstBI | TTCGAA | 1 cut(s) | 1115 |
| BstC8I | GCNNGC | 6 cut(s) | 682, 1357, 2129, 2348, 2900, 4044 |
| BstDSI | CCRYGG | 1 cut(s) | 323 |
| BstENI | CCTNNNNNAGG | 2 cut(s) | 2939, 3703 |
| BstFNI | CGCG | 1 cut(s) | 758 |
| BstH2I | RGCGCY | 2 cut(s) | 1778, 3668 |
| BstHHI | GCGC | 2 cut(s) | 1777, 3667 |
| BstMAI | GTCTC | 8 cut(s) | 230, 825, 2083, 2690, 3209, 3488, 3537, 4050 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 17, 815, 1361, 2015, 2137, 2875 |
| BstNI | CCWGG | 3 cut(s) | 3271, 3738, 4026 |
| BstNSI | RCATGY | 5 cut(s) | 509, 726, 1836, 2113, 2763 |
| BstSCI | CCNGG | 3 cut(s) | 3269, 3736, 4024 |
| BstSFI | CTRYAG | 1 cut(s) | 1365 |
| BstSLI | GKGCMC | 1 cut(s) | 2477 |
| BstUI | CGCG | 1 cut(s) | 758 |
| BstV1I | GCAGC | 6 cut(s) | 964, 1231, 1351, 1623, 2105, 3774 |
| BstV2I | GAAGAC | 6 cut(s) | 117, 494, 2058, 2400, 2832, 3875 |
| BstX2I | RGATCY | 4 cut(s) | 2188, 2367, 3717, 3797 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 549 |
| BstYI | RGATCY | 4 cut(s) | 2188, 2367, 3717, 3797 |
| Bsu15I | ATCGAT | 1 cut(s) | 3224 |
| Bsu36I | CCTNAGG | 1 cut(s) | 3399 |
| BsuRI | GGCC | 4 cut(s) | 2838, 3487, 4006, 4042 |
| BsuTUI | ATCGAT | 1 cut(s) | 3224 |
| BtgI | CCRYGG | 1 cut(s) | 323 |
| BtrI | CACGTC | 1 cut(s) | 615 |
| BtsI | GCAGTG | 1 cut(s) | 3373 |
| BtsIMutI | CAGTG | 1 cut(s) | 3373 |
| BveI | ACCTGC | 1 cut(s) | 3766 |
| Cac8I | GCNNGC | 6 cut(s) | 682, 1357, 2129, 2348, 2900, 4044 |
| CaiI | CAGNNNCTG | 1 cut(s) | 2890 |
| CciI | TCATGA | 2 cut(s) | 2581, 3961 |
| CfoI | GCGC | 2 cut(s) | 1777, 3667 |
| Cfr10I | RCCGGY | 2 cut(s) | 4002, 4042 |
| Cfr13I | GGNCC | 2 cut(s) | 359, 4005 |
| ClaI | ATCGAT | 1 cut(s) | 3224 |
| CseI | GACGC | 2 cut(s) | 186, 1799 |
| Csp6I | GTAC | 7 cut(s) | 429, 471, 1604, 1830, 2628, 2945, 4031 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 807, 842 |
| CviQI | GTAC | 7 cut(s) | 429, 471, 1604, 1830, 2628, 2945, 4031 |
| EaeI | YGGCCR | 2 cut(s) | 3485, 4040 |
| Eam1104I | CTCTTC | 4 cut(s) | 258, 1626, 2979, 3975 |
| EarI | CTCTTC | 4 cut(s) | 258, 1626, 2979, 3975 |
| Ecl136II | GAGCTC | 2 cut(s) | 643, 2140 |
| Eco130I | CCWWGG | 3 cut(s) | 323, 1431, 2149 |
| Eco24I | GRGCYC | 3 cut(s) | 645, 2142, 3277 |
| Eco31I | GGTCTC | 1 cut(s) | 230 |
| Eco32I | GATATC | 3 cut(s) | 270, 1622, 3222 |
| Eco47I | GGWCC | 1 cut(s) | 359 |
| Eco47III | AGCGCT | 1 cut(s) | 1776 |
| Eco53kI | GAGCTC | 2 cut(s) | 643, 2140 |
| Eco57I | CTGAAG | 2 cut(s) | 164, 3410 |
| Eco72I | CACGTG | 1 cut(s) | 803 |
| Eco81I | CCTNAGG | 1 cut(s) | 3399 |
| Eco88I | CYCGRG | 1 cut(s) | 3206 |
| EcoICRI | GAGCTC | 2 cut(s) | 643, 2140 |
| EcoNI | CCTNNNNNAGG | 2 cut(s) | 2939, 3703 |
| EcoRII | CCWGG | 3 cut(s) | 3269, 3736, 4024 |
| EcoRV | GATATC | 3 cut(s) | 270, 1622, 3222 |
| EcoT14I | CCWWGG | 3 cut(s) | 323, 1431, 2149 |
| EcoT22I | ATGCAT | 1 cut(s) | 1335 |
| EcoT38I | GRGCYC | 3 cut(s) | 645, 2142, 3277 |
| ErhI | CCWWGG | 3 cut(s) | 323, 1431, 2149 |
| Esp3I | CGTCTC | 2 cut(s) | 2690, 3488 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 2995, 3027 |
| FaqI | GGGAC | 4 cut(s) | 1975, 3417, 3942, 4008 |
| FauI | CCCGC | 1 cut(s) | 3625 |
| FbaI | TGATCA | 2 cut(s) | 733, 2233 |
| FblI | GTMKAC | 2 cut(s) | 1017, 3304 |
| Fnu4HI | GCNGC | 6 cut(s) | 978, 1220, 1365, 1637, 2094, 3788 |
| FriOI | GRGCYC | 3 cut(s) | 645, 2142, 3277 |
| Fsp4HI | GCNGC | 6 cut(s) | 978, 1220, 1365, 1637, 2094, 3788 |
| GlaI | GCGC | 2 cut(s) | 1776, 3666 |
| GluI | GCNGC | 6 cut(s) | 978, 1220, 1365, 1637, 2094, 3788 |
| GsaI | CCCAGC | 1 cut(s) | 1363 |
| GsuI | CTGGAG | 1 cut(s) | 3332 |
| HaeII | RGCGCY | 2 cut(s) | 1778, 3668 |
| HaeIII | GGCC | 4 cut(s) | 2838, 3487, 4006, 4042 |
| HapII | CCGG | 4 cut(s) | 2498, 3020, 4003, 4043 |
| HgaI | GACGC | 2 cut(s) | 186, 1799 |
| HhaI | GCGC | 2 cut(s) | 1777, 3667 |
| Hin6I | GCGC | 2 cut(s) | 1775, 3665 |
| HinP1I | GCGC | 2 cut(s) | 1775, 3665 |
| HincII | GTYRAC | 4 cut(s) | 6, 892, 928, 2495 |
| HindII | GTYRAC | 4 cut(s) | 6, 892, 928, 2495 |
| HindIII | AAGCTT | 7 cut(s) | 2358, 2504, 2710, 2900, 2981, 3284, 3905 |
| HpaII | CCGG | 4 cut(s) | 2498, 3020, 4003, 4043 |
| Hpy166II | GTNNAC | 8 cut(s) | 6, 892, 928, 1018, 2495, 2617, 3305, 3728 |
| Hpy8I | GTNNAC | 8 cut(s) | 6, 892, 928, 1018, 2495, 2617, 3305, 3728 |
| HpyCH4III | ACNGT | 9 cut(s) | 72, 288, 534, 1128, 1671, 2632, 3408, 3590, 3899 |
| HpyCH4IV | ACGT | 5 cut(s) | 614, 802, 1003, 1517, 2699 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 17, 815, 1361, 2015, 2137, 2875 |
| HpySE526I | ACGT | 5 cut(s) | 614, 802, 1003, 1517, 2699 |
| HspAI | GCGC | 2 cut(s) | 1775, 3665 |
| Kpn2I | TCCGGA | 1 cut(s) | 3019 |
| KpnI | GGTACC | 1 cut(s) | 2948 |
| KroI | GCCGGC | 1 cut(s) | 4042 |
| KroNI | GCCGGC | 1 cut(s) | 4044 |
| Ksp22I | TGATCA | 2 cut(s) | 733, 2233 |
| LguI | GCTCTTC | 1 cut(s) | 1626 |
| LmnI | GCTCC | 3 cut(s) | 770, 2752, 4073 |
| Lsp1109I | GCAGC | 6 cut(s) | 964, 1231, 1351, 1623, 2105, 3774 |
| MaeII | ACGT | 5 cut(s) | 614, 802, 1003, 1517, 2699 |
| MaeIII | GTNAC | 9 cut(s) | 523, 586, 610, 793, 1317, 1342, 1460, 1564, 2052 |
| MfeI | CAATTG | 9 cut(s) | 12, 674, 1091, 1181, 1647, 1756, 1766, 2264, 2879 |
| MflI | RGATCY | 4 cut(s) | 2188, 2367, 3717, 3797 |
| MhlI | GDGCHC | 4 cut(s) | 645, 2142, 2477, 3277 |
| MlsI | TGGCCA | 1 cut(s) | 3487 |
| MluNI | TGGCCA | 1 cut(s) | 3487 |
| MlyI | GAGTC | 6 cut(s) | 676, 863, 979, 1403, 3463, 3687 |
| MmeI | TCCRAC | 3 cut(s) | 748, 857, 1086 |
| Mox20I | TGGCCA | 1 cut(s) | 3487 |
| Mph1103I | ATGCAT | 1 cut(s) | 1335 |
| MroI | TCCGGA | 1 cut(s) | 3019 |
| MroNI | GCCGGC | 1 cut(s) | 4042 |
| MroXI | GAANNNNTTC | 1 cut(s) | 3882 |
| MscI | TGGCCA | 1 cut(s) | 3487 |
| MslI | CAYNNNNRTG | 2 cut(s) | 2532, 3960 |
| Msp20I | TGGCCA | 1 cut(s) | 3487 |
| MspA1I | CMGCKG | 1 cut(s) | 3310 |
| MspCI | CTTAAG | 2 cut(s) | 1597, 3287 |
| MspI | CCGG | 4 cut(s) | 2498, 3020, 4003, 4043 |
| MspR9I | CCNGG | 3 cut(s) | 3271, 3738, 4026 |
| MunI | CAATTG | 9 cut(s) | 12, 674, 1091, 1181, 1647, 1756, 1766, 2264, 2879 |
| MvaI | CCWGG | 3 cut(s) | 3271, 3738, 4026 |
| MvnI | CGCG | 1 cut(s) | 758 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 17, 815, 1361, 2015, 2137, 2875 |
| NaeI | GCCGGC | 1 cut(s) | 4044 |
| NcoI | CCATGG | 1 cut(s) | 323 |
| NgoMIV | GCCGGC | 1 cut(s) | 4042 |
| NlaIV | GGNNCC | 3 cut(s) | 2474, 2946, 3332 |
| NmuCI | GTSAC | 5 cut(s) | 586, 610, 793, 1317, 1460 |
| NsiI | ATGCAT | 1 cut(s) | 1335 |
| NspI | RCATGY | 5 cut(s) | 509, 726, 1836, 2113, 2763 |
| NspV | TTCGAA | 1 cut(s) | 1115 |
| PaeR7I | CTCGAG | 1 cut(s) | 3206 |
| PagI | TCATGA | 2 cut(s) | 2581, 3961 |
| PaqCI | CACCTGC | 1 cut(s) | 3766 |
| PasI | CCCWGGG | 2 cut(s) | 3270, 4025 |
| PciI | ACATGT | 3 cut(s) | 505, 1832, 2759 |
| PciSI | GCTCTTC | 1 cut(s) | 1626 |
| PdiI | GCCGGC | 1 cut(s) | 4044 |
| PdmI | GAANNNNTTC | 1 cut(s) | 3882 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 2258, 2469 |
| PkrI | GCNGC | 6 cut(s) | 979, 1221, 1366, 1638, 2095, 3789 |
| PleI | GAGTC | 6 cut(s) | 675, 862, 979, 1403, 3462, 3687 |
| PmaCI | CACGTG | 1 cut(s) | 803 |
| PmlI | CACGTG | 1 cut(s) | 803 |
| PpsI | GAGTC | 6 cut(s) | 675, 862, 979, 1403, 3462, 3687 |
| Ppu21I | YACGTR | 1 cut(s) | 803 |
| PscI | ACATGT | 3 cut(s) | 505, 1832, 2759 |
| PshBI | ATTAAT | 1 cut(s) | 1875 |
| PsiI | TTATAA | 2 cut(s) | 1545, 4052 |
| Psp124BI | GAGCTC | 2 cut(s) | 645, 2142 |
| Psp6I | CCWGG | 3 cut(s) | 3269, 3736, 4024 |
| PspCI | CACGTG | 1 cut(s) | 803 |
| PspFI | CCCAGC | 1 cut(s) | 1359 |
| PspGI | CCWGG | 3 cut(s) | 3269, 3736, 4024 |
| PspN4I | GGNNCC | 3 cut(s) | 2474, 2946, 3332 |
| PspPI | GGNCC | 2 cut(s) | 359, 4005 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 2274, 2306 |
| PstI | CTGCAG | 1 cut(s) | 1369 |
| PstNI | CAGNNNCTG | 1 cut(s) | 2890 |
| PsuI | RGATCY | 4 cut(s) | 2188, 2367, 3717, 3797 |
| PvuII | CAGCTG | 1 cut(s) | 3310 |
| RsaI | GTAC | 7 cut(s) | 430, 472, 1605, 1831, 2629, 2946, 4032 |
| RsaNI | GTAC | 7 cut(s) | 429, 471, 1604, 1830, 2628, 2945, 4031 |
| RseI | CAYNNNNRTG | 2 cut(s) | 2532, 3960 |
| SacI | GAGCTC | 2 cut(s) | 645, 2142 |
| SapI | GCTCTTC | 1 cut(s) | 1626 |
| SatI | GCNGC | 6 cut(s) | 978, 1220, 1365, 1637, 2094, 3788 |
| Sau96I | GGNCC | 2 cut(s) | 359, 4005 |
| ScaI | AGTACT | 1 cut(s) | 1605 |
| SchI | GAGTC | 6 cut(s) | 676, 863, 979, 1403, 3463, 3687 |
| ScrFI | CCNGG | 3 cut(s) | 3271, 3738, 4026 |
| SduI | GDGCHC | 4 cut(s) | 645, 2142, 2477, 3277 |
| SfcI | CTRYAG | 1 cut(s) | 1365 |
| Sfr274I | CTCGAG | 1 cut(s) | 3206 |
| SfuI | TTCGAA | 1 cut(s) | 1115 |
| SinI | GGWCC | 1 cut(s) | 359 |
| SlaI | CTCGAG | 1 cut(s) | 3206 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 2532, 3960 |
| SmlI | CTYRAG | 4 cut(s) | 1597, 2324, 3206, 3287 |
| SmoI | CTYRAG | 4 cut(s) | 1597, 2324, 3206, 3287 |
| SsiI | CCGC | 7 cut(s) | 20, 35, 756, 1217, 1513, 2306, 3618 |
| SspI | AATATT | 2 cut(s) | 1035, 2600 |
| SstI | GAGCTC | 2 cut(s) | 645, 2142 |
| StyD4I | CCNGG | 3 cut(s) | 3269, 3736, 4024 |
| StyI | CCWWGG | 3 cut(s) | 323, 1431, 2149 |
| TaaI | ACNGT | 9 cut(s) | 72, 288, 534, 1128, 1671, 2632, 3408, 3590, 3899 |
| TaiI | ACGT | 5 cut(s) | 617, 805, 1006, 1520, 2702 |
| TatI | WGTACW | 1 cut(s) | 1603 |
| TscAI | CASTG | 1 cut(s) | 3380 |
| TseFI | GTSAC | 5 cut(s) | 586, 610, 793, 1317, 1460 |
| TseI | GCWGC | 6 cut(s) | 977, 1219, 1364, 1636, 2093, 3787 |
| Tsp45I | GTSAC | 5 cut(s) | 586, 610, 793, 1317, 1460 |
| TspGWI | ACGGA | 1 cut(s) | 978 |
| TspRI | CASTG | 1 cut(s) | 3380 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 2258, 2469 |
| Vha464I | CTTAAG | 2 cut(s) | 1597, 3287 |
| VpaK11BI | GGWCC | 1 cut(s) | 359 |
| VspI | ATTAAT | 1 cut(s) | 1875 |
| XagI | CCTNNNNNAGG | 2 cut(s) | 2939, 3703 |
| XbaI | TCTAGA | 2 cut(s) | 703, 1382 |
| XceI | RCATGY | 5 cut(s) | 509, 726, 1836, 2113, 2763 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 2156 |
| XhoI | CTCGAG | 1 cut(s) | 3206 |
| XmiI | GTMKAC | 2 cut(s) | 1017, 3304 |
| XmnI | GAANNNNTTC | 1 cut(s) | 3882 |
| ZrmI | AGTACT | 1 cut(s) | 1605 |
| Zsp2I | ATGCAT | 1 cut(s) | 1335 |