Rh1AG388600

disease resistance

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr1A
OG0000070
Physical Location & Seq
Reverse (-)
61819919 .. 61828988
9070 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh1AG388600.1

Sequence Viewer

Length: 897 bp
ATGGGAGAGGCTGTTCTTGGGGCGTTCCTCCCGGTGCTGCTTCAGAAGTTGGCGGATCCAGAGGTCATCGAGTACTTTGGACGCGTTAAGGGGGTCGACAAAAAGGTGCTGGAGAAATGGACGAGAACGTTGACTGCAATTGAAGCGGTGCTGAGTGATGCGGAGGAGAAGCAACTAACACAAAGAACGGTGAAACTATGGCTAGATGATCTCAGAGATTTGGCTCACGATGTTCAAGACATATTGGACACATTTGATACTGAAATGCTGAAGCGAAGGATAGAAAGACAACAAGGAAGCACGAGTAATTCATGGATCAGCTACCTCTCTAAACCTAAGTTCAATTTTAGTGTGAACTCAGAAATCAAGAAGATAAGTGATCGACTAGAAAAGATAACTGCTCGAGAAAAGGAGTTTGGTTTGAAGAAACTTGGAGGGTCCAAAAAGCCATGGAAAATGCCACCCACTACTTCTCAACTAGATGCACCTGTGATCGGAAGGGATGAAGCAAAAGCGCAGATTCTTAAGGATTTGCTCTCAAAAGACAAGCATTGTAGCAGCAATTTTCAGAATTTTCATGTTGTAGCGATTGTTGGGCACCAAGCTTTGAATTCTGCGCCATACCCTGTGGTGGTGAGCACTTGGCCTTTCGTAGAGGCTGTCAGAGCTTCTGCTTGGAGGGCTGTTGATAATGGGCTTTCTGCAGTTGATGCAGTTGTTGAGGGCTGTTCGGCTTGTGAGGAACTCAGATGTGATGGTACAGTTGGGCCTGGTGGGAGTCCTGATGAGAATGGAGAGACTACAATCGATGCTCTGGTCATGGATGGGGTGAAGATGGAGGTTGGAGCAGTTGCTGCCATGAGGTATGTCAAAGATGGAATCAAAGCTGCTGGGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04014 map04014
Pfam Domains
Protein Families
NB-ARC

Protein Analysis

298

Amino Acids

32.76

Weight (kDa)

5.93

Isoelectric Point (pI)

29.88

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Rx_N PF18052 10 - 97 6e-21 Rx N-terminal domain
Asparaginase_2 PF01112 208 - 297 2.7e-19 Asparaginase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000070)

Species Orthologous Gene IDs
fragaria_vesca FvH4_7g00360 FvH4_7g00850 FvH4_7g02400 FvH4_7g02430 FvH4_7g02450 FvH4_7g25671 FvH4_7g25680 FvH4_7g25683 FvH4_7g26980 FvH4_7g27330 FvH4_7g27355 FvH4_7g27610 FvH4_7g27642 FvH4_7g27890 FvH4_7g27891 FvH4_7g27891 FvH4_7g27891 FvH4_7g28110 FvH4_7g28390
malus_domestica MD00G1070800.v1.1 MD00G1168000.v1.1 MD00G1168300.v1.1 MD00G1168700.v1.1 MD02G1293100.v1.1 MD02G1293200.v1.1 MD02G1314300.v1.1 MD03G1009000.v1.1 MD03G1009400.v1.1 MD03G1042300.v1.1 MD03G1042400.v1.1 MD07G1033600.v1.1 MD07G1033700.v1.1 MD07G1033900.v1.1 MD11G1011400.v1.1 MD11G1011700.v1.1 MD11G1029800.v1.1 MD11G1029900.v1.1 MD11G1030300.v1.1 MD11G1030400.v1.1 MD11G1030500.v1.1 MD11G1031300.v1.1 MD11G1031600.v1.1 MD11G1032000.v1.1 MD11G1033200.v1.1 MD11G1033600.v1.1 MD11G1033800.v1.1 MD11G1033900.v1.1 MD11G1034100.v1.1 MD11G1034400.v1.1 MD11G1040600.v1.1 MD11G1041100.v1.1 MD11G1043100.v1.1 MD11G1043500.v1.1 MD11G1044500.v1.1 MD11G1045100.v1.1 MD11G1045600.v1.1
prunus_persica Prupe.2G022400_v2.0.a1 Prupe.2G022400_v2.0.a1 Prupe.2G022400_v2.0.a1 Prupe.2G022500_v2.0.a1 Prupe.2G022500_v2.0.a1 Prupe.2G022900_v2.0.a1 Prupe.2G023500_v2.0.a1 Prupe.2G023500_v2.0.a1 Prupe.2G023500_v2.0.a1 Prupe.2G023500_v2.0.a1 Prupe.2G023500_v2.0.a1 Prupe.2G023500_v2.0.a1 Prupe.2G023600_v2.0.a1 Prupe.2G028000_v2.0.a1 Prupe.2G030200_v2.0.a1 Prupe.2G067600_v2.0.a1 Prupe.8G117900_v2.0.a1
pyrus_communis pycom02g26350 pycom03g03270 pycom07g02370 pycom11g00750 pycom11g00790 pycom11g02340 pycom11g02370 pycom11g02380 pycom11g02390 pycom11g02410 pycom11g02460 pycom11g02470 pycom11g02500 pycom11g02510 pycom11g02520 pycom11g02530 pycom11g02580 pycom11g02590 pycom11g02680 pycom11g02710 pycom11g02720 pycom11g02730 pycom11g02750 pycom11g02760 pycom11g02770 pycom11g03690 pycom13g25120 pycom13g25130 pycom13g25140 pycom13g25170 pycom13g25180 pycom13g25190 pycom13g25210
rosa_chinensis RchiOBHm_Chr1g0315001 RchiOBHm_Chr1g0315411 RchiOBHm_Chr1g0317951 RchiOBHm_Chr1g0319741 RchiOBHm_Chr1g0319841 RchiOBHm_Chr1g0319911 RchiOBHm_Chr1g0319991 RchiOBHm_Chr1g0320001 RchiOBHm_Chr1g0320021 RchiOBHm_Chr1g0320081 RchiOBHm_Chr1g0320111 RchiOBHm_Chr1g0320131 RchiOBHm_Chr1g0320161 RchiOBHm_Chr1g0320171 RchiOBHm_Chr1g0320241 RchiOBHm_Chr1g0320281 RchiOBHm_Chr1g0320411 RchiOBHm_Chr1g0320461 RchiOBHm_Chr1g0320551 RchiOBHm_Chr1g0320581 RchiOBHm_Chr1g0320661 RchiOBHm_Chr1g0320891 RchiOBHm_Chr1g0320971 RchiOBHm_Chr1g0321021 RchiOBHm_Chr1g0321031 RchiOBHm_Chr1g0321091 RchiOBHm_Chr1g0321351 RchiOBHm_Chr1g0321481 RchiOBHm_Chr1g0321491 RchiOBHm_Chr1g0327521 RchiOBHm_Chr1g0328061 RchiOBHm_Chr1g0334991 RchiOBHm_Chr1g0373781 RchiOBHm_Chr1g0373891 RchiOBHm_Chr1g0374841 RchiOBHm_Chr2g0131111 RchiOBHm_Chr2g0131121 RchiOBHm_Chr4g0408901 RchiOBHm_Chr5g0041691 RchiOBHm_Chr7g0237021
rosa_laevigata RLG00000019168 RLG00000030456 RLG00000030460 RLG00000030571
rosa_multiflora Rmu_co7963468.1_g000001 Rmu_co7991248.1_g000001 Rmu_co8195256.1_g000001 Rmu_co8312199.1_g000001 Rmu_co8349215.1_g000001 Rmu_co8351041.1_g000001 Rmu_co8422719.1_g000001 Rmu_co8450711.1_g000001 Rmu_co8465555.1_g000001 Rmu_co8489965.1_g000001 Rmu_sc0000087.1_g000014 Rmu_sc0000272.1_g000015 Rmu_sc0000724.1_g000006 Rmu_sc0000724.1_g000021 Rmu_sc0000724.1_g000022 Rmu_sc0000861.1_g000024 Rmu_sc0001049.1_g000006 Rmu_sc0001049.1_g000007 Rmu_sc0001512.1_g000001 Rmu_sc0002022.1_g000004 Rmu_sc0002063.1_g000011 Rmu_sc0002131.1_g000024 Rmu_sc0002337.1_g000012 Rmu_sc0002341.1_g000005 Rmu_sc0002539.1_g000117 Rmu_sc0002745.1_g000005 Rmu_sc0002745.1_g000006 Rmu_sc0003145.1_g000002 Rmu_sc0003199.1_g000007 Rmu_sc0003270.1_g000039 Rmu_sc0003270.1_g000040 Rmu_sc0003423.1_g000001 Rmu_sc0003423.1_g000002 Rmu_sc0003629.1_g000067 Rmu_sc0004039.1_g000002 Rmu_sc0004555.1_g000001 Rmu_sc0004555.1_g000005 Rmu_sc0004555.1_g000006 Rmu_sc0004947.1_g000025 Rmu_sc0004947.1_g000026 Rmu_sc0005255.1_g000025 Rmu_sc0007977.1_g000016 Rmu_sc0008752.1_g000005 Rmu_sc0009236.1_g000004 Rmu_sc0009236.1_g000008 Rmu_sc0009236.1_g000009 Rmu_sc0009236.1_g000010 Rmu_sc0011424.1_g000036 Rmu_sc0013413.1_g000001 Rmu_sc0013735.1_g000002 Rmu_sc0015304.1_g000002 Rmu_sc0015304.1_g000003 Rmu_sc0015585.1_g000001 Rmu_sc0018410.1_g000001 Rmu_sc0022723.1_g000001 Rmu_sc0022723.1_g000002 Rmu_sc0022724.1_g000001 Rmu_sc0023430.1_g000001 Rmu_sc0026053.1_g000001 Rmu_sc0026429.1_g000002 Rmu_sc0026647.1_g000001 Rmu_sc0031359.1_g000001 Rmu_ssc0000042.1_g000040 Rmu_ssc0000081.1_g000001 Rmu_ssc0000300.1_g000011
rosa_roxburghii Rroxscaffold_160G00433620 Rroxscaffold_160G00433990 Rroxscaffold_1G00038820 Rroxscaffold_2G00113190 Rroxscaffold_4G00283240 Rroxscaffold_4G00283930 Rroxscaffold_4G00284010 Rroxscaffold_4G00322600 Rroxscaffold_4G00327710 Rroxscaffold_4G00328100 Rroxscaffold_4G00328130 Rroxscaffold_4G00331590 Rroxscaffold_5G00353280
rosa_rugosa Rorug01G0004200 Rorug01G0018800 Rorug01G0018900 Rorug01G0029900 Rorug01G0030000 Rorug01G0030000 Rorug01G0030000 Rorug01G0030200 Rorug01G0030300 Rorug01G0030800 Rorug01G0032400 Rorug01G0032900 Rorug01G0055800 Rorug01G0067600 Rorug01G0067700 Rorug01G0067800 Rorug01G0067900 Rorug01G0068000 Rorug01G0379500 Rorug01G0379600 Rorug01G0379600 Rorug01G0385200 Rorug01G0385300 Rorug02G0295100 Rorug04G0088500 Rorug04G0088600 Rorug05G0194900 Rorug07G0301400
rosa_samantha Rh1AG014800 Rh1AG015200 Rh1AG030500 Rh1AG041800 Rh1AG042300 Rh1AG042700 Rh1AG042800 Rh1AG042900 Rh1AG045000 Rh1AG085100 Rh1AG085200 Rh1AG388600 Rh1AG396700 Rh1AG396900 Rh1BG007300 Rh1BG039200 Rh1BG039600 Rh1BG042800 Rh1BG067300 Rh1BG109700 Rh1BG109900 Rh1BG354000 Rh1CG043800 Rh1CG044400 Rh1DG008600 Rh1DG022900 Rh1DG023400 Rh1DG023600 Rh1DG023900 Rh1DG024100 Rh1DG024400 Rh1DG024500 Rh1DG025500 Rh1DG025700 Rh1DG026500 Rh1DG026800 Rh1DG038900 Rh1DG048800 Rh1DG049300 Rh1DG051700 Rh1DG052000 Rh1DG146200 Rh1DG383500 Rh2BG354900 Rh2CG333600 Rh4BG149600 Rh4BG149700 Rh4CG160600
rosa_wichuraiana Rw0G001100 Rw0G001130 Rw0G001180 Rw0G012580 Rw1G003480 Rw1G003540 Rw1G003600 Rw1G003640 Rw1G003670 Rw1G003750 Rw1G003940 Rw1G006650 Rw1G034550 Rw1G034560 Rw1G034650 Rw1G034660 Rw1G035170 Rw1G035190 Rw1G037060 Rw2G028210 Rw4G012540 Rw5G026370 Rw7G037900

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 597
AccI GTMKAC 1 cut(s) 96
AccII CGCG 1 cut(s) 84
AciI CCGC 3 cut(s) 53, 146, 161
AclI AACGTT 1 cut(s) 128
AclWI GGATC 3 cut(s) 50, 63, 323
AcsI RAATTY 2 cut(s) 571, 610
AcuI CTGAAG 2 cut(s) 26, 290
AfaI GTAC 2 cut(s) 74, 760
AfiI CCNNNNNNNGG 2 cut(s) 494, 631
AflII CTTAAG 1 cut(s) 524
AflIII ACRYGT 1 cut(s) 82
AgsI TTSAA 5 cut(s) 143, 236, 343, 424, 610
AjnI CCWGG 1 cut(s) 769
AjuI GAANNNNNNNTTGG 2 cut(s) 399, 431
AloI GAACNNNNNNTCC 1 cut(s) 29
AluBI AGCT 4 cut(s) 321, 605, 668, 887
AluI AGCT 4 cut(s) 321, 605, 668, 887
Alw21I GWGCWC 1 cut(s) 641
Alw26I GTCTC 1 cut(s) 791
AlwI GGATC 3 cut(s) 50, 63, 323
AlwNI CAGNNNCTG 1 cut(s) 854
Ama87I CYCGRG 1 cut(s) 402
AoxI GGCC 2 cut(s) 644, 767
ApeKI GCWGC 4 cut(s) 37, 558, 854, 887
ApoI RAATTY 2 cut(s) 571, 610
AspLEI GCGC 2 cut(s) 517, 619
AspS9I GGNCC 2 cut(s) 438, 767
AsuC2I CCSGG 1 cut(s) 32
AsuHPI GGTGA 3 cut(s) 202, 646, 841
AvaI CYCGRG 1 cut(s) 402
AvaII GGWCC 1 cut(s) 438
BaeGI GKGCMC 1 cut(s) 600
BamHI GGATCC 1 cut(s) 55
BanI GGYRCC 1 cut(s) 597
BauI CACGAG 1 cut(s) 301
Bbv12I GWGCWC 1 cut(s) 641
BbvI GCAGC 4 cut(s) 24, 570, 841, 874
BccI CCATC 4 cut(s) 749, 818, 829, 869
BciT130I CCWGG 1 cut(s) 771
BcnI CCSGG 1 cut(s) 32
BcoDI GTCTC 1 cut(s) 791
BfaI CTAG 3 cut(s) 203, 386, 479
BfmI CTRYAG 1 cut(s) 702
BfrI CTTAAG 1 cut(s) 524
BisI GCNGC 4 cut(s) 38, 559, 855, 888
BlsI GCNGC 4 cut(s) 39, 560, 856, 889
BmcAI AGTACT 1 cut(s) 74
Bme1390I CCNGG 2 cut(s) 32, 771
Bme18I GGWCC 1 cut(s) 438
BmeT110I CYCGRG 1 cut(s) 402
BmgT120I GGNCC 2 cut(s) 438, 767
BmiI GGNNCC 3 cut(s) 57, 439, 599
BmrFI CCNGG 2 cut(s) 32, 771
BmsI GCATC 4 cut(s) 148, 472, 700, 799
BpmI CTGGAG 1 cut(s) 131
BpuMI CCSGG 1 cut(s) 32
Bsa29I ATCGAT 1 cut(s) 807
BsaJI CCNNGG 1 cut(s) 449
BsaXI ACNNNNNCTCC 1 cut(s) 27
Bsc4I CCNNNNNNNGG 2 cut(s) 494, 631
BseBI CCWGG 1 cut(s) 771
BseCI ATCGAT 1 cut(s) 807
BseDI CCNNGG 1 cut(s) 449
BseGI GGATG 2 cut(s) 508, 829
BseLI CCNNNNNNNGG 2 cut(s) 494, 631
BseMII CTCAG 4 cut(s) 143, 226, 372, 760
BseRI GAGGAG 1 cut(s) 179
BseSI GKGCMC 1 cut(s) 600
BseXI GCAGC 4 cut(s) 24, 570, 841, 874
BseYI CCCAGC 1 cut(s) 890
Bsh1236I CGCG 1 cut(s) 84
BshFI GGCC 2 cut(s) 646, 769
BshNI GGYRCC 1 cut(s) 597
BshVI ATCGAT 1 cut(s) 807
BsiHKAI GWGCWC 1 cut(s) 641
BsiHKCI CYCGRG 1 cut(s) 402
BsiSI CCGG 1 cut(s) 32
BslI CCNNNNNNNGG 2 cut(s) 494, 631
BsmAI GTCTC 1 cut(s) 791
BsnI GGCC 2 cut(s) 646, 769
BsoBI CYCGRG 1 cut(s) 402
Bsp1286I GDGCHC 2 cut(s) 600, 641
Bsp143I GATC 5 cut(s) 55, 208, 315, 379, 492
Bsp19I CCATGG 1 cut(s) 449
BspACI CCGC 3 cut(s) 53, 146, 161
BspANI GGCC 2 cut(s) 646, 769
BspCNI CTCAG 4 cut(s) 144, 225, 371, 759
BspDI ATCGAT 1 cut(s) 807
BspFNI CGCG 1 cut(s) 84
BspLI GGNNCC 3 cut(s) 57, 439, 599
BspMAI CTGCAG 1 cut(s) 706
BspPI GGATC 3 cut(s) 50, 63, 323
BspT107I GGYRCC 1 cut(s) 597
BspTI CTTAAG 1 cut(s) 524
BssECI CCNNGG 1 cut(s) 449
BssMI GATC 5 cut(s) 55, 208, 315, 379, 492
BssSI CACGAG 1 cut(s) 301
BssT1I CCWWGG 1 cut(s) 449
Bst2BI CACGAG 1 cut(s) 301
Bst2UI CCWGG 1 cut(s) 771
Bst4CI ACNGT 2 cut(s) 190, 763
BstAFI CTTAAG 1 cut(s) 524
BstAPI GCANNNNNTGC 2 cut(s) 710, 854
BstDEI CTNAG 5 cut(s) 152, 212, 336, 358, 746
BstDSI CCRYGG 1 cut(s) 449
BstF5I GGATG 2 cut(s) 508, 829
BstFNI CGCG 1 cut(s) 84
BstHHI GCGC 2 cut(s) 517, 619
BstKTI GATC 5 cut(s) 58, 211, 318, 382, 495
BstMAI GTCTC 1 cut(s) 791
BstMBI GATC 5 cut(s) 55, 208, 315, 379, 492
BstMWI GCNNNNNNNGC 5 cut(s) 143, 665, 680, 710, 854
BstNI CCWGG 1 cut(s) 771
BstSCI CCNGG 2 cut(s) 30, 769
BstSFI CTRYAG 1 cut(s) 702
BstSLI GKGCMC 1 cut(s) 600
BstUI CGCG 1 cut(s) 84
BstV1I GCAGC 4 cut(s) 24, 570, 841, 874
BstX2I RGATCY 1 cut(s) 55
BstYI RGATCY 1 cut(s) 55
Bsu15I ATCGAT 1 cut(s) 807
BsuRI GGCC 2 cut(s) 646, 769
BsuTUI ATCGAT 1 cut(s) 807
BtgI CCRYGG 1 cut(s) 449
BtsCI GGATG 2 cut(s) 508, 829
CaiI CAGNNNCTG 1 cut(s) 854
CfoI GCGC 2 cut(s) 517, 619
Cfr13I GGNCC 2 cut(s) 438, 767
ClaI ATCGAT 1 cut(s) 807
CseI GACGC 1 cut(s) 90
Csp6I GTAC 2 cut(s) 73, 759
CviAII CATG 5 cut(s) 312, 450, 578, 820, 859
CviQI GTAC 2 cut(s) 73, 759
DdeI CTNAG 5 cut(s) 152, 212, 336, 358, 746
DpnI GATC 5 cut(s) 57, 210, 317, 381, 494
DpnII GATC 5 cut(s) 55, 208, 315, 379, 492
EciI GGCGGA 1 cut(s) 68
Eco130I CCWWGG 1 cut(s) 449
Eco47I GGWCC 1 cut(s) 438
Eco57I CTGAAG 2 cut(s) 26, 290
Eco88I CYCGRG 1 cut(s) 402
EcoRI GAATTC 1 cut(s) 610
EcoRII CCWGG 1 cut(s) 769
EcoT14I CCWWGG 1 cut(s) 449
ErhI CCWWGG 1 cut(s) 449
FaeI CATG 5 cut(s) 315, 453, 581, 823, 862
FaiI YATR 9 cut(s) 199, 242, 313, 451, 579, 622, 821, 860, 867
FatI CATG 5 cut(s) 311, 449, 577, 819, 858
FblI GTMKAC 1 cut(s) 96
Fnu4HI GCNGC 4 cut(s) 38, 559, 855, 888
FokI GGATG 2 cut(s) 515, 836
Fsp4HI GCNGC 4 cut(s) 38, 559, 855, 888
FspBI CTAG 3 cut(s) 203, 386, 479
GlaI GCGC 2 cut(s) 516, 618
GluI GCNGC 4 cut(s) 38, 559, 855, 888
GsaI CCCAGC 1 cut(s) 894
GsuI CTGGAG 1 cut(s) 131
HaeIII GGCC 2 cut(s) 646, 769
HapII CCGG 1 cut(s) 32
HgaI GACGC 1 cut(s) 90
HhaI GCGC 2 cut(s) 517, 619
Hin1II CATG 5 cut(s) 315, 453, 581, 823, 862
Hin6I GCGC 2 cut(s) 515, 617
HinP1I GCGC 2 cut(s) 515, 617
HincII GTYRAC 2 cut(s) 97, 132
HindII GTYRAC 2 cut(s) 97, 132
HindIII AAGCTT 1 cut(s) 603
HinfI GANTC 3 cut(s) 520, 778, 879
HpaII CCGG 1 cut(s) 32
HphI GGTGA 3 cut(s) 202, 646, 841
Hpy166II GTNNAC 3 cut(s) 97, 132, 355
Hpy188I TCNGA 7 cut(s) 45, 215, 361, 497, 570, 665, 749
Hpy188III TCNNGA 6 cut(s) 59, 227, 236, 367, 404, 782
Hpy8I GTNNAC 3 cut(s) 97, 132, 355
HpyAV CCTTC 2 cut(s) 270, 492
HpyCH4III ACNGT 2 cut(s) 190, 763
HpyCH4IV ACGT 1 cut(s) 128
HpyCH4V TGCA 4 cut(s) 137, 485, 704, 713
HpyF10VI GCNNNNNNNGC 5 cut(s) 143, 665, 680, 710, 854
HpyF3I CTNAG 5 cut(s) 152, 212, 336, 358, 746
HpySE526I ACGT 1 cut(s) 128
Hsp92II CATG 5 cut(s) 315, 453, 581, 823, 862
HspAI GCGC 2 cut(s) 515, 617
Kzo9I GATC 5 cut(s) 55, 208, 315, 379, 492
LmnI GCTCC 1 cut(s) 845
Lsp1109I GCAGC 4 cut(s) 24, 570, 841, 874
LweI GCATC 4 cut(s) 148, 472, 700, 799
MaeI CTAG 3 cut(s) 203, 386, 479
MaeII ACGT 1 cut(s) 128
MalI GATC 5 cut(s) 57, 210, 317, 381, 494
MboI GATC 5 cut(s) 55, 208, 315, 379, 492
MboII GAAGA 3 cut(s) 382, 436, 844
MfeI CAATTG 1 cut(s) 138
MflI RGATCY 1 cut(s) 55
MhlI GDGCHC 2 cut(s) 600, 641
MluCI AATT 6 cut(s) 138, 307, 343, 562, 571, 610
MluI ACGCGT 1 cut(s) 82
MlyI GAGTC 1 cut(s) 787
MmeI TCCRAC 1 cut(s) 823
MseI TTAA 2 cut(s) 87, 525
MspCI CTTAAG 1 cut(s) 524
MspI CCGG 1 cut(s) 32
MspR9I CCNGG 2 cut(s) 32, 771
MunI CAATTG 1 cut(s) 138
MvaI CCWGG 1 cut(s) 771
MvnI CGCG 1 cut(s) 84
MwoI GCNNNNNNNGC 5 cut(s) 143, 665, 680, 710, 854
NciI CCSGG 1 cut(s) 32
NcoI CCATGG 1 cut(s) 449
NdeII GATC 5 cut(s) 55, 208, 315, 379, 492
NlaIII CATG 5 cut(s) 315, 453, 581, 823, 862
NlaIV GGNNCC 3 cut(s) 57, 439, 599
PaeR7I CTCGAG 1 cut(s) 402
PfeI GAWTC 2 cut(s) 520, 879
PkrI GCNGC 4 cut(s) 39, 560, 856, 889
PleI GAGTC 1 cut(s) 786
PpsI GAGTC 1 cut(s) 786
Psp1406I AACGTT 1 cut(s) 128
Psp6I CCWGG 1 cut(s) 769
PspFI CCCAGC 1 cut(s) 890
PspGI CCWGG 1 cut(s) 769
PspN4I GGNNCC 3 cut(s) 57, 439, 599
PspPI GGNCC 2 cut(s) 438, 767
PstI CTGCAG 1 cut(s) 706
PstNI CAGNNNCTG 1 cut(s) 854
PsuI RGATCY 1 cut(s) 55
RsaI GTAC 2 cut(s) 74, 760
RsaNI GTAC 2 cut(s) 73, 759
SalI GTCGAC 1 cut(s) 95
SaqAI TTAA 2 cut(s) 87, 525
SatI GCNGC 4 cut(s) 38, 559, 855, 888
Sau3AI GATC 5 cut(s) 55, 208, 315, 379, 492
Sau96I GGNCC 2 cut(s) 438, 767
ScaI AGTACT 1 cut(s) 74
SchI GAGTC 1 cut(s) 787
ScrFI CCNGG 2 cut(s) 32, 771
SduI GDGCHC 2 cut(s) 600, 641
SfaNI GCATC 4 cut(s) 148, 472, 700, 799
SfcI CTRYAG 1 cut(s) 702
Sfr274I CTCGAG 1 cut(s) 402
SinI GGWCC 1 cut(s) 438
SlaI CTCGAG 1 cut(s) 402
SmlI CTYRAG 2 cut(s) 402, 524
SmoI CTYRAG 2 cut(s) 402, 524
Sse9I AATT 6 cut(s) 138, 307, 343, 562, 571, 610
SsiI CCGC 3 cut(s) 53, 146, 161
SspMI CTAG 3 cut(s) 203, 386, 479
StyD4I CCNGG 2 cut(s) 30, 769
StyI CCWWGG 1 cut(s) 449
TaaI ACNGT 2 cut(s) 190, 763
TaiI ACGT 1 cut(s) 131
TaqI TCGA 5 cut(s) 69, 96, 382, 403, 807
TasI AATT 6 cut(s) 138, 307, 343, 562, 571, 610
TatI WGTACW 1 cut(s) 72
TfiI GAWTC 2 cut(s) 520, 879
Tru1I TTAA 2 cut(s) 87, 525
Tru9I TTAA 2 cut(s) 87, 525
TseI GCWGC 4 cut(s) 37, 558, 854, 887
TspDTI ATGAA 3 cut(s) 300, 519, 566
Vha464I CTTAAG 1 cut(s) 524
VpaK11BI GGWCC 1 cut(s) 438
XapI RAATTY 2 cut(s) 571, 610
XhoI CTCGAG 1 cut(s) 402
XmiI GTMKAC 1 cut(s) 96
XspI CTAG 3 cut(s) 203, 386, 479
ZrmI AGTACT 1 cut(s) 74
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.