Rmu_co7991248.1_g000001

disease resistance

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_co7991248.1
Physical Location & Seq
Reverse (-)
1 .. 474
474 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_co7991248.1_g000001.1.cds

Sequence Viewer

Length: 427 bp
atggcagtgggagagatctttcttgcggcattccttcggttgctgctggacaggttaacgcgtctagagttctttggaaggttaggaggaggagttggcaaaaagctgcagaaatggagcgaaacactgtctgcaattgaagcggtgctttccgatgcggaggagaagcagctgacgaacacggcagtggatctgtggctgaatgacctcaaacacttggcttatgatatcgacgatctactcaacaccttttctaatgagatgttagcacgcgagcagctcaagcttcaccaaactggcacgagcaaggtacgacgcttcttgaccaaaggtcctcacaaagttatgttcaatttcagtgtgaactccgaaatagacgacattgctaatcgtttgcaagacatatttgaccggaaagagaaactcg
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

142

Amino Acids

16.27

Weight (kDa)

6.3

Isoelectric Point (pI)

31.58

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0000070)

Species Orthologous Gene IDs
fragaria_vesca FvH4_7g00360 FvH4_7g00850 FvH4_7g02400 FvH4_7g02430 FvH4_7g02450 FvH4_7g25671 FvH4_7g25680 FvH4_7g25683 FvH4_7g26980 FvH4_7g27330 FvH4_7g27355 FvH4_7g27610 FvH4_7g27642 FvH4_7g27890 FvH4_7g27891 FvH4_7g27891 FvH4_7g27891 FvH4_7g28110 FvH4_7g28390
malus_domestica MD00G1070800.v1.1 MD00G1168000.v1.1 MD00G1168300.v1.1 MD00G1168700.v1.1 MD02G1293100.v1.1 MD02G1293200.v1.1 MD02G1314300.v1.1 MD03G1009000.v1.1 MD03G1009400.v1.1 MD03G1042300.v1.1 MD03G1042400.v1.1 MD07G1033600.v1.1 MD07G1033700.v1.1 MD07G1033900.v1.1 MD11G1011400.v1.1 MD11G1011700.v1.1 MD11G1029800.v1.1 MD11G1029900.v1.1 MD11G1030300.v1.1 MD11G1030400.v1.1 MD11G1030500.v1.1 MD11G1031300.v1.1 MD11G1031600.v1.1 MD11G1032000.v1.1 MD11G1033200.v1.1 MD11G1033600.v1.1 MD11G1033800.v1.1 MD11G1033900.v1.1 MD11G1034100.v1.1 MD11G1034400.v1.1 MD11G1040600.v1.1 MD11G1041100.v1.1 MD11G1043100.v1.1 MD11G1043500.v1.1 MD11G1044500.v1.1 MD11G1045100.v1.1 MD11G1045600.v1.1
prunus_persica Prupe.2G022400_v2.0.a1 Prupe.2G022400_v2.0.a1 Prupe.2G022400_v2.0.a1 Prupe.2G022500_v2.0.a1 Prupe.2G022500_v2.0.a1 Prupe.2G022900_v2.0.a1 Prupe.2G023500_v2.0.a1 Prupe.2G023500_v2.0.a1 Prupe.2G023500_v2.0.a1 Prupe.2G023500_v2.0.a1 Prupe.2G023500_v2.0.a1 Prupe.2G023500_v2.0.a1 Prupe.2G023600_v2.0.a1 Prupe.2G028000_v2.0.a1 Prupe.2G030200_v2.0.a1 Prupe.2G067600_v2.0.a1 Prupe.8G117900_v2.0.a1
pyrus_communis pycom02g26350 pycom03g03270 pycom07g02370 pycom11g00750 pycom11g00790 pycom11g02340 pycom11g02370 pycom11g02380 pycom11g02390 pycom11g02410 pycom11g02460 pycom11g02470 pycom11g02500 pycom11g02510 pycom11g02520 pycom11g02530 pycom11g02580 pycom11g02590 pycom11g02680 pycom11g02710 pycom11g02720 pycom11g02730 pycom11g02750 pycom11g02760 pycom11g02770 pycom11g03690 pycom13g25120 pycom13g25130 pycom13g25140 pycom13g25170 pycom13g25180 pycom13g25190 pycom13g25210
rosa_chinensis RchiOBHm_Chr1g0315001 RchiOBHm_Chr1g0315411 RchiOBHm_Chr1g0317951 RchiOBHm_Chr1g0319741 RchiOBHm_Chr1g0319841 RchiOBHm_Chr1g0319911 RchiOBHm_Chr1g0319991 RchiOBHm_Chr1g0320001 RchiOBHm_Chr1g0320021 RchiOBHm_Chr1g0320081 RchiOBHm_Chr1g0320111 RchiOBHm_Chr1g0320131 RchiOBHm_Chr1g0320161 RchiOBHm_Chr1g0320171 RchiOBHm_Chr1g0320241 RchiOBHm_Chr1g0320281 RchiOBHm_Chr1g0320411 RchiOBHm_Chr1g0320461 RchiOBHm_Chr1g0320551 RchiOBHm_Chr1g0320581 RchiOBHm_Chr1g0320661 RchiOBHm_Chr1g0320891 RchiOBHm_Chr1g0320971 RchiOBHm_Chr1g0321021 RchiOBHm_Chr1g0321031 RchiOBHm_Chr1g0321091 RchiOBHm_Chr1g0321351 RchiOBHm_Chr1g0321481 RchiOBHm_Chr1g0321491 RchiOBHm_Chr1g0327521 RchiOBHm_Chr1g0328061 RchiOBHm_Chr1g0334991 RchiOBHm_Chr1g0373781 RchiOBHm_Chr1g0373891 RchiOBHm_Chr1g0374841 RchiOBHm_Chr2g0131111 RchiOBHm_Chr2g0131121 RchiOBHm_Chr4g0408901 RchiOBHm_Chr5g0041691 RchiOBHm_Chr7g0237021
rosa_laevigata RLG00000019168 RLG00000030456 RLG00000030460 RLG00000030571
rosa_multiflora Rmu_co7963468.1_g000001 Rmu_co7991248.1_g000001 Rmu_co8195256.1_g000001 Rmu_co8312199.1_g000001 Rmu_co8349215.1_g000001 Rmu_co8351041.1_g000001 Rmu_co8422719.1_g000001 Rmu_co8450711.1_g000001 Rmu_co8465555.1_g000001 Rmu_co8489965.1_g000001 Rmu_sc0000087.1_g000014 Rmu_sc0000272.1_g000015 Rmu_sc0000724.1_g000006 Rmu_sc0000724.1_g000021 Rmu_sc0000724.1_g000022 Rmu_sc0000861.1_g000024 Rmu_sc0001049.1_g000006 Rmu_sc0001049.1_g000007 Rmu_sc0001512.1_g000001 Rmu_sc0002022.1_g000004 Rmu_sc0002063.1_g000011 Rmu_sc0002131.1_g000024 Rmu_sc0002337.1_g000012 Rmu_sc0002341.1_g000005 Rmu_sc0002539.1_g000117 Rmu_sc0002745.1_g000005 Rmu_sc0002745.1_g000006 Rmu_sc0003145.1_g000002 Rmu_sc0003199.1_g000007 Rmu_sc0003270.1_g000039 Rmu_sc0003270.1_g000040 Rmu_sc0003423.1_g000001 Rmu_sc0003423.1_g000002 Rmu_sc0003629.1_g000067 Rmu_sc0004039.1_g000002 Rmu_sc0004555.1_g000001 Rmu_sc0004555.1_g000005 Rmu_sc0004555.1_g000006 Rmu_sc0004947.1_g000025 Rmu_sc0004947.1_g000026 Rmu_sc0005255.1_g000025 Rmu_sc0007977.1_g000016 Rmu_sc0008752.1_g000005 Rmu_sc0009236.1_g000004 Rmu_sc0009236.1_g000008 Rmu_sc0009236.1_g000009 Rmu_sc0009236.1_g000010 Rmu_sc0011424.1_g000036 Rmu_sc0013413.1_g000001 Rmu_sc0013735.1_g000002 Rmu_sc0015304.1_g000002 Rmu_sc0015304.1_g000003 Rmu_sc0015585.1_g000001 Rmu_sc0018410.1_g000001 Rmu_sc0022723.1_g000001 Rmu_sc0022723.1_g000002 Rmu_sc0022724.1_g000001 Rmu_sc0023430.1_g000001 Rmu_sc0026053.1_g000001 Rmu_sc0026429.1_g000002 Rmu_sc0026647.1_g000001 Rmu_sc0031359.1_g000001 Rmu_ssc0000042.1_g000040 Rmu_ssc0000081.1_g000001 Rmu_ssc0000300.1_g000011
rosa_roxburghii Rroxscaffold_160G00433620 Rroxscaffold_160G00433990 Rroxscaffold_1G00038820 Rroxscaffold_2G00113190 Rroxscaffold_4G00283240 Rroxscaffold_4G00283930 Rroxscaffold_4G00284010 Rroxscaffold_4G00322600 Rroxscaffold_4G00327710 Rroxscaffold_4G00328100 Rroxscaffold_4G00328130 Rroxscaffold_4G00331590 Rroxscaffold_5G00353280
rosa_rugosa Rorug01G0004200 Rorug01G0018800 Rorug01G0018900 Rorug01G0029900 Rorug01G0030000 Rorug01G0030000 Rorug01G0030000 Rorug01G0030200 Rorug01G0030300 Rorug01G0030800 Rorug01G0032400 Rorug01G0032900 Rorug01G0055800 Rorug01G0067600 Rorug01G0067700 Rorug01G0067800 Rorug01G0067900 Rorug01G0068000 Rorug01G0379500 Rorug01G0379600 Rorug01G0379600 Rorug01G0385200 Rorug01G0385300 Rorug02G0295100 Rorug04G0088500 Rorug04G0088600 Rorug05G0194900 Rorug07G0301400
rosa_samantha Rh1AG014800 Rh1AG015200 Rh1AG030500 Rh1AG041800 Rh1AG042300 Rh1AG042700 Rh1AG042800 Rh1AG042900 Rh1AG045000 Rh1AG085100 Rh1AG085200 Rh1AG388600 Rh1AG396700 Rh1AG396900 Rh1BG007300 Rh1BG039200 Rh1BG039600 Rh1BG042800 Rh1BG067300 Rh1BG109700 Rh1BG109900 Rh1BG354000 Rh1CG043800 Rh1CG044400 Rh1DG008600 Rh1DG022900 Rh1DG023400 Rh1DG023600 Rh1DG023900 Rh1DG024100 Rh1DG024400 Rh1DG024500 Rh1DG025500 Rh1DG025700 Rh1DG026500 Rh1DG026800 Rh1DG038900 Rh1DG048800 Rh1DG049300 Rh1DG051700 Rh1DG052000 Rh1DG146200 Rh1DG383500 Rh2BG354900 Rh2CG333600 Rh4BG149600 Rh4BG149700 Rh4CG160600
rosa_wichuraiana Rw0G001100 Rw0G001130 Rw0G001180 Rw0G012580 Rw1G003480 Rw1G003540 Rw1G003600 Rw1G003640 Rw1G003670 Rw1G003750 Rw1G003940 Rw1G006650 Rw1G034550 Rw1G034560 Rw1G034650 Rw1G034660 Rw1G035170 Rw1G035190 Rw1G037060 Rw2G028210 Rw4G012540 Rw5G026370 Rw7G037900

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 2 cut(s) 61, 273
AciI CCGC 3 cut(s) 26, 143, 158
AclWI GGATC 1 cut(s) 198
AfaI GTAC 1 cut(s) 312
AflIII ACRYGT 1 cut(s) 59
AgsI TTSAA 2 cut(s) 140, 352
AhdI GACNNNNNGTC 1 cut(s) 330
AleI CACNNNNGTG 1 cut(s) 185
AluBI AGCT 4 cut(s) 106, 172, 280, 286
AluI AGCT 4 cut(s) 106, 172, 280, 286
AlwI GGATC 1 cut(s) 198
ApeKI GCWGC 4 cut(s) 43, 106, 169, 277
AspS9I GGNCC 1 cut(s) 332
AsuHPI GGTGA 1 cut(s) 281
AvaII GGWCC 1 cut(s) 332
BauI CACGAG 1 cut(s) 301
BbvI GCAGC 4 cut(s) 30, 93, 181, 289
BceAI ACGGC 1 cut(s) 198
BfaI CTAG 1 cut(s) 65
BfmI CTRYAG 1 cut(s) 107
BglII AGATCT 1 cut(s) 15
BisI GCNGC 5 cut(s) 27, 44, 107, 170, 278
BlsI GCNGC 5 cut(s) 28, 45, 108, 171, 279
Bme18I GGWCC 1 cut(s) 332
BmeRI GACNNNNNGTC 1 cut(s) 330
BmgT120I GGNCC 1 cut(s) 332
BmsI GCATC 1 cut(s) 145
BpuEI CTTGAG 1 cut(s) 266
BsaWI WCCGGW 1 cut(s) 411
BsaXI ACNNNNNCTCC 2 cut(s) 78, 108
Bse1I ACTGG 1 cut(s) 301
Bse3DI GCAATG 1 cut(s) 381
BseMI GCAATG 1 cut(s) 381
BseNI ACTGG 1 cut(s) 301
BseRI GAGGAG 3 cut(s) 102, 105, 176
BseXI GCAGC 4 cut(s) 30, 93, 181, 289
Bsh1236I CGCG 2 cut(s) 61, 273
BsiSI CCGG 1 cut(s) 412
BsmI GAATGC 1 cut(s) 29
Bsp143I GATC 3 cut(s) 15, 190, 235
BspACI CCGC 3 cut(s) 26, 143, 158
BspFNI CGCG 2 cut(s) 61, 273
BspMAI CTGCAG 1 cut(s) 111
BspPI GGATC 1 cut(s) 198
BsrDI GCAATG 1 cut(s) 381
BsrI ACTGG 1 cut(s) 301
BssMI GATC 3 cut(s) 15, 190, 235
BssSI CACGAG 1 cut(s) 301
Bst2BI CACGAG 1 cut(s) 301
Bst4CI ACNGT 1 cut(s) 129
BstC8I GCNNGC 2 cut(s) 271, 275
BstFNI CGCG 2 cut(s) 61, 273
BstKTI GATC 3 cut(s) 18, 193, 238
BstMBI GATC 3 cut(s) 15, 190, 235
BstMWI GCNNNNNNNGC 2 cut(s) 140, 283
BstSFI CTRYAG 1 cut(s) 107
BstUI CGCG 2 cut(s) 61, 273
BstV1I GCAGC 4 cut(s) 30, 93, 181, 289
BstX2I RGATCY 2 cut(s) 15, 190
BstYI RGATCY 2 cut(s) 15, 190
BtsI GCAGTG 2 cut(s) 12, 192
BtsIMutI CAGTG 4 cut(s) 12, 125, 192, 364
Cac8I GCNNGC 2 cut(s) 271, 275
Cfr13I GGNCC 1 cut(s) 332
CseI GACGC 2 cut(s) 50, 324
Csp6I GTAC 1 cut(s) 311
CviJI RGCY 6 cut(s) 106, 172, 199, 221, 280, 286
CviKI_1 RGCY 6 cut(s) 106, 172, 199, 221, 280, 286
CviQI GTAC 1 cut(s) 311
DpnI GATC 3 cut(s) 17, 192, 237
DpnII GATC 3 cut(s) 15, 190, 235
DriI GACNNNNNGTC 1 cut(s) 330
Eam1105I GACNNNNNGTC 1 cut(s) 330
Eco32I GATATC 1 cut(s) 229
Eco47I GGWCC 1 cut(s) 332
EcoO109I RGGNCCY 1 cut(s) 332
EcoRV GATATC 1 cut(s) 229
FaiI YATR 3 cut(s) 225, 347, 404
FalI AAGNNNNNCTT 2 cut(s) 132, 164
Fnu4HI GCNGC 5 cut(s) 27, 44, 107, 170, 278
Fsp4HI GCNGC 5 cut(s) 27, 44, 107, 170, 278
FspBI CTAG 1 cut(s) 65
GluI GCNGC 5 cut(s) 27, 44, 107, 170, 278
HapII CCGG 1 cut(s) 412
HgaI GACGC 2 cut(s) 50, 324
HincII GTYRAC 1 cut(s) 57
HindII GTYRAC 1 cut(s) 57
HindIII AAGCTT 1 cut(s) 284
HpaI GTTAAC 1 cut(s) 57
HpaII CCGG 1 cut(s) 412
HphI GGTGA 1 cut(s) 281
Hpy166II GTNNAC 2 cut(s) 57, 364
Hpy188I TCNGA 2 cut(s) 154, 370
Hpy188III TCNNGA 2 cut(s) 65, 322
Hpy8I GTNNAC 2 cut(s) 57, 364
Hpy99I CGWCG 2 cut(s) 236, 318
HpyAV CCTTC 2 cut(s) 44, 72
HpyCH4III ACNGT 1 cut(s) 129
HpyCH4V TGCA 3 cut(s) 109, 134, 397
HpyF10VI GCNNNNNNNGC 2 cut(s) 140, 283
KspAI GTTAAC 1 cut(s) 57
Kzo9I GATC 3 cut(s) 15, 190, 235
LmnI GCTCC 1 cut(s) 117
LpnPI CCDG 3 cut(s) 32, 37, 282
Lsp1109I GCAGC 4 cut(s) 30, 93, 181, 289
LweI GCATC 1 cut(s) 145
MaeI CTAG 1 cut(s) 65
MalI GATC 3 cut(s) 17, 192, 237
MboI GATC 3 cut(s) 15, 190, 235
MfeI CAATTG 1 cut(s) 135
MflI RGATCY 2 cut(s) 15, 190
MluCI AATT 2 cut(s) 135, 352
MluI ACGCGT 1 cut(s) 59
MnlI CCTC 5 cut(s) 80, 83, 154, 218, 345
MseI TTAA 1 cut(s) 56
MslI CAYNNNNRTG 1 cut(s) 185
MspA1I CMGCKG 1 cut(s) 172
MspI CCGG 1 cut(s) 412
MunI CAATTG 1 cut(s) 135
Mva1269I GAATGC 1 cut(s) 29
MvnI CGCG 2 cut(s) 61, 273
MwoI GCNNNNNNNGC 2 cut(s) 140, 283
NdeII GATC 3 cut(s) 15, 190, 235
OliI CACNNNNGTG 1 cut(s) 185
PctI GAATGC 1 cut(s) 29
PkrI GCNGC 5 cut(s) 28, 45, 108, 171, 279
PpuMI RGGWCCY 1 cut(s) 332
Psp5II RGGWCCY 1 cut(s) 332
PspPI GGNCC 1 cut(s) 332
PspPPI RGGWCCY 1 cut(s) 332
PstI CTGCAG 1 cut(s) 111
PsuI RGATCY 2 cut(s) 15, 190
PvuII CAGCTG 1 cut(s) 172
RsaI GTAC 1 cut(s) 312
RsaNI GTAC 1 cut(s) 311
RseI CAYNNNNRTG 1 cut(s) 185
SaqAI TTAA 1 cut(s) 56
SatI GCNGC 5 cut(s) 27, 44, 107, 170, 278
Sau3AI GATC 3 cut(s) 15, 190, 235
Sau96I GGNCC 1 cut(s) 332
SfaNI GCATC 1 cut(s) 145
SfcI CTRYAG 1 cut(s) 107
SinI GGWCC 1 cut(s) 332
SmiMI CAYNNNNRTG 1 cut(s) 185
SmlI CTYRAG 1 cut(s) 281
SmoI CTYRAG 1 cut(s) 281
Sse9I AATT 2 cut(s) 135, 352
SsiI CCGC 3 cut(s) 26, 143, 158
SspMI CTAG 1 cut(s) 65
TaaI ACNGT 1 cut(s) 129
TaqI TCGA 1 cut(s) 231
TasI AATT 2 cut(s) 135, 352
TauI GCSGC 1 cut(s) 29
Tru1I TTAA 1 cut(s) 56
Tru9I TTAA 1 cut(s) 56
TscAI CASTG 4 cut(s) 12, 132, 192, 364
TseI GCWGC 4 cut(s) 43, 106, 169, 277
TspRI CASTG 4 cut(s) 12, 132, 192, 364
VpaK11BI GGWCC 1 cut(s) 332
XbaI TCTAGA 1 cut(s) 64
XspI CTAG 1 cut(s) 65
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.