disease resistance
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Rx_N | PF18052 | 10 - 100 | 1.9e-19 | Rx N-terminal domain |
| NB-ARC | PF00931 | 171 - 343 | 6.5e-36 | NB-ARC domain |
| WHD_DRP | PF23559 | 427 - 493 | 9e-23 | Disease resistance protein Winged helix domain |
| LRR_14 | PF23598 | 571 - 840 | 1.1e-19 | Leucine-rich repeat region |
| LRR_R13L1-DRL21 | PF25019 | 690 - 813 | 7.9e-35 | R13L1/DRL21 LRRs |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 2 cut(s) | 972, 2709 |
| Acc65I | GGTACC | 1 cut(s) | 3082 |
| AccB1I | GGYRCC | 1 cut(s) | 3082 |
| AccI | GTMKAC | 2 cut(s) | 96, 3442 |
| AccII | CGCG | 2 cut(s) | 930, 1444 |
| AccIII | TCCGGA | 1 cut(s) | 3157 |
| AciI | CCGC | 6 cut(s) | 146, 161, 1192, 1636, 2390, 3844 |
| AclWI | GGATC | 3 cut(s) | 1309, 2065, 3854 |
| AcoI | YGGCCR | 1 cut(s) | 3623 |
| AcsI | RAATTY | 9 cut(s) | 338, 571, 758, 1246, 1295, 1939, 1957, 2306, 3892 |
| AcuI | CTGAAG | 7 cut(s) | 290, 1046, 1367, 1641, 2648, 3098, 3548 |
| AcyI | GRCGYC | 1 cut(s) | 82 |
| AdeI | CACNNNGTG | 2 cut(s) | 1118, 3887 |
| AfaI | GTAC | 7 cut(s) | 74, 556, 598, 3027, 3084, 3534, 4022 |
| AfiI | CCNNNNNNNGG | 8 cut(s) | 91, 494, 1997, 2396, 2620, 3079, 3164, 4052 |
| AflII | CTTAAG | 2 cut(s) | 86, 524 |
| AflIII | ACRYGT | 4 cut(s) | 631, 848, 2247, 2897 |
| AjiI | CACGTC | 1 cut(s) | 741 |
| AjnI | CCWGG | 2 cut(s) | 3407, 3883 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 399, 431 |
| AloI | GAACNNNNNNTCC | 1 cut(s) | 29 |
| Alw21I | GWGCWC | 2 cut(s) | 1020, 2280 |
| Alw26I | GTCTC | 6 cut(s) | 951, 2319, 2498, 3347, 3624, 4013 |
| AlwI | GGATC | 3 cut(s) | 1309, 2065, 3854 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 2524, 2610 |
| Ama87I | CYCGRG | 1 cut(s) | 402 |
| Aor13HI | TCCGGA | 1 cut(s) | 3157 |
| AoxI | GGCC | 4 cut(s) | 1378, 3623, 4054, 4133 |
| ApeKI | GCWGC | 6 cut(s) | 37, 719, 899, 1103, 1487, 1768 |
| ApoI | RAATTY | 9 cut(s) | 338, 571, 758, 1246, 1295, 1939, 1957, 2306, 3892 |
| Asp718I | GGTACC | 1 cut(s) | 3082 |
| AspLEI | GCGC | 1 cut(s) | 3796 |
| AspS9I | GGNCC | 3 cut(s) | 1378, 4054, 4134 |
| AsuHPI | GGTGA | 8 cut(s) | 724, 1940, 2272, 3092, 3547, 3899, 3985, 4089 |
| AsuII | TTCGAA | 4 cut(s) | 1244, 1961, 2826, 3896 |
| AvaI | CYCGRG | 1 cut(s) | 402 |
| AxyI | CCTNAGG | 1 cut(s) | 3537 |
| BaeGI | GKGCMC | 1 cut(s) | 3518 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 924, 957 |
| BalI | TGGCCA | 1 cut(s) | 3625 |
| BanI | GGYRCC | 1 cut(s) | 3082 |
| BanII | GRGCYC | 2 cut(s) | 2280, 3415 |
| BbsI | GAAGAC | 2 cut(s) | 2196, 2970 |
| Bbv12I | GWGCWC | 2 cut(s) | 1020, 2280 |
| BbvCI | CCTCAGC | 1 cut(s) | 1992 |
| BbvI | GCAGC | 6 cut(s) | 24, 731, 911, 1090, 1474, 1755 |
| BceAI | ACGGC | 4 cut(s) | 615, 1081, 1365, 2473 |
| BciT130I | CCWGG | 2 cut(s) | 3409, 3885 |
| BciVI | GTATCC | 1 cut(s) | 3423 |
| BcoDI | GTCTC | 6 cut(s) | 951, 2319, 2498, 3347, 3624, 4013 |
| BfmI | CTRYAG | 2 cut(s) | 875, 1488 |
| BfoI | RGCGCY | 1 cut(s) | 3797 |
| BfrI | CTTAAG | 2 cut(s) | 86, 524 |
| BfuI | GTATCC | 1 cut(s) | 3423 |
| BglII | AGATCT | 1 cut(s) | 3923 |
| BisI | GCNGC | 7 cut(s) | 38, 720, 900, 1104, 1488, 1769, 2390 |
| BlsI | GCNGC | 7 cut(s) | 39, 721, 901, 1105, 1489, 1770, 2391 |
| BmcAI | AGTACT | 2 cut(s) | 74, 3027 |
| Bme1390I | CCNGG | 2 cut(s) | 3409, 3885 |
| BmeT110I | CYCGRG | 1 cut(s) | 402 |
| BmgBI | CACGTC | 1 cut(s) | 741 |
| BmgT120I | GGNCC | 3 cut(s) | 1378, 4054, 4134 |
| BmiI | GGNNCC | 3 cut(s) | 1989, 3084, 3470 |
| BmrFI | CCNGG | 2 cut(s) | 3409, 3885 |
| BoxI | GACNNNNGTC | 2 cut(s) | 2763, 3483 |
| BpiI | GAAGAC | 2 cut(s) | 2196, 2970 |
| BpmI | CTGGAG | 2 cut(s) | 131, 3470 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1992 |
| Bpu14I | TTCGAA | 4 cut(s) | 1244, 1961, 2826, 3896 |
| BpuEI | CTTGAG | 5 cut(s) | 62, 2531, 3329, 3792, 4022 |
| BsaAI | YACGTR | 1 cut(s) | 4177 |
| BsaHI | GRCGYC | 1 cut(s) | 82 |
| BsaI | GGTCTC | 2 cut(s) | 2319, 2498 |
| BsaJI | CCNNGG | 5 cut(s) | 449, 1554, 2287, 3407, 3408 |
| BsaWI | WCCGGW | 2 cut(s) | 31, 3157 |
| BsaXI | ACNNNNNCTCC | 3 cut(s) | 27, 971, 1001 |
| Bsc4I | CCNNNNNNNGG | 8 cut(s) | 91, 494, 1997, 2396, 2620, 3079, 3164, 4052 |
| Bse118I | RCCGGY | 1 cut(s) | 4131 |
| Bse1I | ACTGG | 3 cut(s) | 127, 2884, 3033 |
| Bse21I | CCTNAGG | 1 cut(s) | 3537 |
| Bse3DI | GCAATG | 3 cut(s) | 1093, 2021, 2102 |
| BseAI | TCCGGA | 1 cut(s) | 3157 |
| BseBI | CCWGG | 2 cut(s) | 3409, 3885 |
| BseDI | CCNNGG | 5 cut(s) | 449, 1554, 2287, 3407, 3408 |
| BseLI | CCNNNNNNNGG | 8 cut(s) | 91, 494, 1997, 2396, 2620, 3079, 3164, 4052 |
| BseMI | GCAATG | 3 cut(s) | 1093, 2021, 2102 |
| BseNI | ACTGG | 3 cut(s) | 127, 2884, 3033 |
| BseRI | GAGGAG | 5 cut(s) | 179, 1980, 2903, 3320, 4064 |
| BseSI | GKGCMC | 1 cut(s) | 3518 |
| BseXI | GCAGC | 6 cut(s) | 24, 731, 911, 1090, 1474, 1755 |
| Bsh1236I | CGCG | 2 cut(s) | 930, 1444 |
| BshFI | GGCC | 4 cut(s) | 1380, 3625, 4056, 4135 |
| BshNI | GGYRCC | 1 cut(s) | 3082 |
| BsiHKAI | GWGCWC | 2 cut(s) | 1020, 2280 |
| BsiHKCI | CYCGRG | 1 cut(s) | 402 |
| BsiSI | CCGG | 4 cut(s) | 32, 2298, 3158, 4132 |
| BslFI | GGGAC | 3 cut(s) | 857, 2113, 3555 |
| BslI | CCNNNNNNNGG | 8 cut(s) | 91, 494, 1997, 2396, 2620, 3079, 3164, 4052 |
| BsmAI | GTCTC | 6 cut(s) | 951, 2319, 2498, 3347, 3624, 4013 |
| BsmBI | CGTCTC | 1 cut(s) | 4013 |
| BsmFI | GGGAC | 3 cut(s) | 857, 2113, 3555 |
| BsmI | GAATGC | 1 cut(s) | 23 |
| BsnI | GGCC | 4 cut(s) | 1380, 3625, 4056, 4135 |
| Bso31I | GGTCTC | 2 cut(s) | 2319, 2498 |
| BsoBI | CYCGRG | 1 cut(s) | 402 |
| Bsp119I | TTCGAA | 4 cut(s) | 1244, 1961, 2826, 3896 |
| Bsp1286I | GDGCHC | 4 cut(s) | 1020, 2280, 3415, 3518 |
| Bsp13I | TCCGGA | 1 cut(s) | 3157 |
| Bsp19I | CCATGG | 1 cut(s) | 449 |
| Bsp68I | TCGCGA | 1 cut(s) | 1444 |
| BspACI | CCGC | 6 cut(s) | 146, 161, 1192, 1636, 2390, 3844 |
| BspANI | GGCC | 4 cut(s) | 1380, 3625, 4056, 4135 |
| BspEI | TCCGGA | 1 cut(s) | 3157 |
| BspFNI | CGCG | 2 cut(s) | 930, 1444 |
| BspHI | TCATGA | 2 cut(s) | 2719, 2841 |
| BspLI | GGNNCC | 3 cut(s) | 1989, 3084, 3470 |
| BspMAI | CTGCAG | 2 cut(s) | 879, 1492 |
| BspPI | GGATC | 3 cut(s) | 1309, 2065, 3854 |
| BspT104I | TTCGAA | 4 cut(s) | 1244, 1961, 2826, 3896 |
| BspT107I | GGYRCC | 1 cut(s) | 3082 |
| BspTI | CTTAAG | 2 cut(s) | 86, 524 |
| BspTNI | GGTCTC | 2 cut(s) | 2319, 2498 |
| BsrDI | GCAATG | 3 cut(s) | 1093, 2021, 2102 |
| BsrFI | RCCGGY | 1 cut(s) | 4131 |
| BsrI | ACTGG | 3 cut(s) | 127, 2884, 3033 |
| BssAI | RCCGGY | 1 cut(s) | 4131 |
| BssECI | CCNNGG | 5 cut(s) | 449, 1554, 2287, 3407, 3408 |
| BssNI | GRCGYC | 1 cut(s) | 82 |
| BssT1I | CCWWGG | 3 cut(s) | 449, 1554, 2287 |
| Bst2UI | CCWGG | 2 cut(s) | 3409, 3885 |
| Bst4CI | ACNGT | 8 cut(s) | 198, 660, 1257, 1271, 1803, 3546, 3719, 4025 |
| Bst6I | CTCTTC | 2 cut(s) | 3117, 4104 |
| BstACI | GRCGYC | 1 cut(s) | 82 |
| BstAFI | CTTAAG | 2 cut(s) | 86, 524 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 312, 3013 |
| BstBAI | YACGTR | 1 cut(s) | 4177 |
| BstBI | TTCGAA | 4 cut(s) | 1244, 1961, 2826, 3896 |
| BstC8I | GCNNGC | 5 cut(s) | 808, 2158, 2551, 3949, 4058 |
| BstDSI | CCRYGG | 1 cut(s) | 449 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 3077 |
| BstFNI | CGCG | 2 cut(s) | 930, 1444 |
| BstH2I | RGCGCY | 1 cut(s) | 3797 |
| BstHHI | GCGC | 1 cut(s) | 3796 |
| BstMAI | GTCTC | 6 cut(s) | 951, 2319, 2498, 3347, 3624, 4013 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 143, 312, 1484, 2153, 2166, 3013 |
| BstNI | CCWGG | 2 cut(s) | 3409, 3885 |
| BstNSI | RCATGY | 4 cut(s) | 635, 852, 2251, 2901 |
| BstPAI | GACNNNNGTC | 2 cut(s) | 2763, 3483 |
| BstSCI | CCNGG | 2 cut(s) | 3407, 3883 |
| BstSFI | CTRYAG | 2 cut(s) | 875, 1488 |
| BstSLI | GKGCMC | 1 cut(s) | 3518 |
| BstUI | CGCG | 2 cut(s) | 930, 1444 |
| BstV1I | GCAGC | 6 cut(s) | 24, 731, 911, 1090, 1474, 1755 |
| BstV2I | GAAGAC | 2 cut(s) | 2196, 2970 |
| BstX2I | RGATCY | 1 cut(s) | 3923 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 675 |
| BstYI | RGATCY | 1 cut(s) | 3923 |
| Bsu36I | CCTNAGG | 1 cut(s) | 3537 |
| BsuI | GTATCC | 1 cut(s) | 3423 |
| BsuRI | GGCC | 4 cut(s) | 1380, 3625, 4056, 4135 |
| BtgI | CCRYGG | 1 cut(s) | 449 |
| BtrI | CACGTC | 1 cut(s) | 741 |
| BtsI | GCAGTG | 2 cut(s) | 872, 2451 |
| BtsIMutI | CAGTG | 4 cut(s) | 872, 1262, 2451, 3693 |
| BtuMI | TCGCGA | 1 cut(s) | 1444 |
| Cac8I | GCNNGC | 5 cut(s) | 808, 2158, 2551, 3949, 4058 |
| CaiI | CAGNNNCTG | 2 cut(s) | 2524, 2610 |
| CciI | TCATGA | 2 cut(s) | 2719, 2841 |
| CfoI | GCGC | 1 cut(s) | 3796 |
| Cfr10I | RCCGGY | 1 cut(s) | 4131 |
| Cfr13I | GGNCC | 3 cut(s) | 1378, 4054, 4134 |
| CseI | GACGC | 4 cut(s) | 90, 1934, 3995, 4147 |
| CsiI | ACCWGGT | 1 cut(s) | 3883 |
| Csp6I | GTAC | 7 cut(s) | 73, 555, 597, 3026, 3083, 3533, 4021 |
| CviQI | GTAC | 7 cut(s) | 73, 555, 597, 3026, 3083, 3533, 4021 |
| DraI | TTTAAA | 1 cut(s) | 3192 |
| DraIII | CACNNNGTG | 2 cut(s) | 1118, 3887 |
| EaeI | YGGCCR | 1 cut(s) | 3623 |
| Eam1104I | CTCTTC | 2 cut(s) | 3117, 4104 |
| EarI | CTCTTC | 2 cut(s) | 3117, 4104 |
| Ecl136II | GAGCTC | 1 cut(s) | 2278 |
| Eco130I | CCWWGG | 3 cut(s) | 449, 1554, 2287 |
| Eco24I | GRGCYC | 2 cut(s) | 2280, 3415 |
| Eco31I | GGTCTC | 2 cut(s) | 2319, 2498 |
| Eco32I | GATATC | 2 cut(s) | 1754, 2670 |
| Eco53kI | GAGCTC | 1 cut(s) | 2278 |
| Eco57I | CTGAAG | 7 cut(s) | 290, 1046, 1367, 1641, 2648, 3098, 3548 |
| Eco81I | CCTNAGG | 1 cut(s) | 3537 |
| Eco88I | CYCGRG | 1 cut(s) | 402 |
| EcoICRI | GAGCTC | 1 cut(s) | 2278 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 3077 |
| EcoO109I | RGGNCCY | 1 cut(s) | 4054 |
| EcoRI | GAATTC | 3 cut(s) | 758, 1957, 3892 |
| EcoRII | CCWGG | 2 cut(s) | 3407, 3883 |
| EcoRV | GATATC | 2 cut(s) | 1754, 2670 |
| EcoT14I | CCWWGG | 3 cut(s) | 449, 1554, 2287 |
| EcoT22I | ATGCAT | 2 cut(s) | 317, 1458 |
| EcoT38I | GRGCYC | 2 cut(s) | 2280, 3415 |
| ErhI | CCWWGG | 3 cut(s) | 449, 1554, 2287 |
| Esp3I | CGTCTC | 1 cut(s) | 4013 |
| FaqI | GGGAC | 3 cut(s) | 857, 2113, 3555 |
| FblI | GTMKAC | 2 cut(s) | 96, 3442 |
| Fnu4HI | GCNGC | 7 cut(s) | 38, 720, 900, 1104, 1488, 1769, 2390 |
| FriOI | GRGCYC | 2 cut(s) | 2280, 3415 |
| Fsp4HI | GCNGC | 7 cut(s) | 38, 720, 900, 1104, 1488, 1769, 2390 |
| GlaI | GCGC | 1 cut(s) | 3795 |
| GluI | GCNGC | 7 cut(s) | 38, 720, 900, 1104, 1488, 1769, 2390 |
| GsuI | CTGGAG | 2 cut(s) | 131, 3470 |
| HaeII | RGCGCY | 1 cut(s) | 3797 |
| HaeIII | GGCC | 4 cut(s) | 1380, 3625, 4056, 4135 |
| HapII | CCGG | 4 cut(s) | 32, 2298, 3158, 4132 |
| HgaI | GACGC | 4 cut(s) | 90, 1934, 3995, 4147 |
| HhaI | GCGC | 1 cut(s) | 3796 |
| Hin1I | GRCGYC | 1 cut(s) | 82 |
| Hin6I | GCGC | 1 cut(s) | 3794 |
| HinP1I | GCGC | 1 cut(s) | 3794 |
| HincII | GTYRAC | 5 cut(s) | 97, 132, 2381, 2796, 3488 |
| HindII | GTYRAC | 5 cut(s) | 97, 132, 2381, 2796, 3488 |
| HindIII | AAGCTT | 6 cut(s) | 2496, 2594, 2642, 2848, 3949, 4031 |
| HpaII | CCGG | 4 cut(s) | 32, 2298, 3158, 4132 |
| HphI | GGTGA | 8 cut(s) | 724, 1940, 2272, 3092, 3547, 3899, 3985, 4089 |
| Hpy99I | CGWCG | 1 cut(s) | 4163 |
| HpyCH4III | ACNGT | 8 cut(s) | 198, 660, 1257, 1271, 1803, 3546, 3719, 4025 |
| HpyCH4IV | ACGT | 5 cut(s) | 740, 1129, 1480, 3046, 4176 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 143, 312, 1484, 2153, 2166, 3013 |
| HpySE526I | ACGT | 5 cut(s) | 740, 1129, 1480, 3046, 4176 |
| Hsp92I | GRCGYC | 1 cut(s) | 82 |
| HspAI | GCGC | 1 cut(s) | 3794 |
| Kpn2I | TCCGGA | 1 cut(s) | 3157 |
| KpnI | GGTACC | 1 cut(s) | 3086 |
| LmnI | GCTCC | 6 cut(s) | 766, 896, 1993, 2890, 3247, 3921 |
| Lsp1109I | GCAGC | 6 cut(s) | 24, 731, 911, 1090, 1474, 1755 |
| MabI | ACCWGGT | 1 cut(s) | 3883 |
| MaeII | ACGT | 5 cut(s) | 740, 1129, 1480, 3046, 4176 |
| MfeI | CAATTG | 6 cut(s) | 138, 1310, 1779, 2402, 3017, 3768 |
| MflI | RGATCY | 1 cut(s) | 3923 |
| MhlI | GDGCHC | 4 cut(s) | 1020, 2280, 3415, 3518 |
| MlsI | TGGCCA | 1 cut(s) | 3625 |
| MluNI | TGGCCA | 1 cut(s) | 3625 |
| MlyI | GAGTC | 5 cut(s) | 989, 1174, 1526, 1841, 2210 |
| MmeI | TCCRAC | 1 cut(s) | 983 |
| Mox20I | TGGCCA | 1 cut(s) | 3625 |
| Mph1103I | ATGCAT | 2 cut(s) | 317, 1458 |
| MroI | TCCGGA | 1 cut(s) | 3157 |
| MscI | TGGCCA | 1 cut(s) | 3625 |
| MslI | CAYNNNNRTG | 2 cut(s) | 1922, 3129 |
| Msp20I | TGGCCA | 1 cut(s) | 3625 |
| MspA1I | CMGCKG | 2 cut(s) | 902, 3448 |
| MspCI | CTTAAG | 2 cut(s) | 86, 524 |
| MspI | CCGG | 4 cut(s) | 32, 2298, 3158, 4132 |
| MspR9I | CCNGG | 2 cut(s) | 3409, 3885 |
| MunI | CAATTG | 6 cut(s) | 138, 1310, 1779, 2402, 3017, 3768 |
| Mva1269I | GAATGC | 1 cut(s) | 23 |
| MvaI | CCWGG | 2 cut(s) | 3409, 3885 |
| MvnI | CGCG | 2 cut(s) | 930, 1444 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 143, 312, 1484, 2153, 2166, 3013 |
| NcoI | CCATGG | 1 cut(s) | 449 |
| NlaIV | GGNNCC | 3 cut(s) | 1989, 3084, 3470 |
| NmeAIII | GCCGAG | 1 cut(s) | 3633 |
| NmuCI | GTSAC | 6 cut(s) | 712, 736, 919, 1382, 1946, 2213 |
| NruI | TCGCGA | 1 cut(s) | 1444 |
| NsiI | ATGCAT | 2 cut(s) | 317, 1458 |
| NspI | RCATGY | 4 cut(s) | 635, 852, 2251, 2901 |
| NspV | TTCGAA | 4 cut(s) | 1244, 1961, 2826, 3896 |
| PaeR7I | CTCGAG | 1 cut(s) | 402 |
| PagI | TCATGA | 2 cut(s) | 2719, 2841 |
| PasI | CCCWGGG | 1 cut(s) | 3408 |
| PciI | ACATGT | 4 cut(s) | 631, 848, 2247, 2897 |
| PctI | GAATGC | 1 cut(s) | 23 |
| PkrI | GCNGC | 7 cut(s) | 39, 721, 901, 1105, 1489, 1770, 2391 |
| PleI | GAGTC | 5 cut(s) | 988, 1174, 1526, 1841, 2210 |
| PpsI | GAGTC | 5 cut(s) | 988, 1174, 1526, 1841, 2210 |
| Ppu21I | YACGTR | 1 cut(s) | 4177 |
| PscI | ACATGT | 4 cut(s) | 631, 848, 2247, 2897 |
| PshAI | GACNNNNGTC | 2 cut(s) | 2763, 3483 |
| PsiI | TTATAA | 2 cut(s) | 972, 2709 |
| Psp124BI | GAGCTC | 1 cut(s) | 2280 |
| Psp6I | CCWGG | 2 cut(s) | 3407, 3883 |
| PspGI | CCWGG | 2 cut(s) | 3407, 3883 |
| PspN4I | GGNNCC | 3 cut(s) | 1989, 3084, 3470 |
| PspPI | GGNCC | 3 cut(s) | 1378, 4054, 4134 |
| PstI | CTGCAG | 2 cut(s) | 879, 1492 |
| PstNI | CAGNNNCTG | 2 cut(s) | 2524, 2610 |
| PsuI | RGATCY | 1 cut(s) | 3923 |
| PvuII | CAGCTG | 2 cut(s) | 902, 3448 |
| RruI | TCGCGA | 1 cut(s) | 1444 |
| RsaI | GTAC | 7 cut(s) | 74, 556, 598, 3027, 3084, 3534, 4022 |
| RsaNI | GTAC | 7 cut(s) | 73, 555, 597, 3026, 3083, 3533, 4021 |
| RseI | CAYNNNNRTG | 2 cut(s) | 1922, 3129 |
| SacI | GAGCTC | 1 cut(s) | 2280 |
| SalI | GTCGAC | 1 cut(s) | 95 |
| SatI | GCNGC | 7 cut(s) | 38, 720, 900, 1104, 1488, 1769, 2390 |
| Sau96I | GGNCC | 3 cut(s) | 1378, 4054, 4134 |
| ScaI | AGTACT | 2 cut(s) | 74, 3027 |
| SchI | GAGTC | 5 cut(s) | 989, 1174, 1526, 1841, 2210 |
| ScrFI | CCNGG | 2 cut(s) | 3409, 3885 |
| SduI | GDGCHC | 4 cut(s) | 1020, 2280, 3415, 3518 |
| SexAI | ACCWGGT | 1 cut(s) | 3883 |
| SfcI | CTRYAG | 2 cut(s) | 875, 1488 |
| Sfr274I | CTCGAG | 1 cut(s) | 402 |
| SfuI | TTCGAA | 4 cut(s) | 1244, 1961, 2826, 3896 |
| SlaI | CTCGAG | 1 cut(s) | 402 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 1922, 3129 |
| SmlI | CTYRAG | 8 cut(s) | 41, 86, 402, 524, 2510, 3344, 3807, 4001 |
| SmoI | CTYRAG | 8 cut(s) | 41, 86, 402, 524, 2510, 3344, 3807, 4001 |
| SsiI | CCGC | 6 cut(s) | 146, 161, 1192, 1636, 2390, 3844 |
| SspI | AATATT | 1 cut(s) | 1161 |
| SstI | GAGCTC | 1 cut(s) | 2280 |
| StyD4I | CCNGG | 2 cut(s) | 3407, 3883 |
| StyI | CCWWGG | 3 cut(s) | 449, 1554, 2287 |
| TaaI | ACNGT | 8 cut(s) | 198, 660, 1257, 1271, 1803, 3546, 3719, 4025 |
| TaiI | ACGT | 5 cut(s) | 743, 1132, 1483, 3049, 4179 |
| TaqII | GACCGA | 1 cut(s) | 1778 |
| TatI | WGTACW | 2 cut(s) | 72, 3025 |
| TauI | GCSGC | 1 cut(s) | 2392 |
| TscAI | CASTG | 4 cut(s) | 879, 1262, 2451, 3700 |
| TseFI | GTSAC | 6 cut(s) | 712, 736, 919, 1382, 1946, 2213 |
| TseI | GCWGC | 6 cut(s) | 37, 719, 899, 1103, 1487, 1768 |
| Tsp45I | GTSAC | 6 cut(s) | 712, 736, 919, 1382, 1946, 2213 |
| TspGWI | ACGGA | 2 cut(s) | 1905, 3520 |
| TspRI | CASTG | 4 cut(s) | 879, 1262, 2451, 3700 |
| Vha464I | CTTAAG | 2 cut(s) | 86, 524 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 3077 |
| XapI | RAATTY | 9 cut(s) | 338, 571, 758, 1246, 1295, 1939, 1957, 2306, 3892 |
| XbaI | TCTAGA | 2 cut(s) | 829, 1505 |
| XceI | RCATGY | 4 cut(s) | 635, 852, 2251, 2901 |
| XhoI | CTCGAG | 1 cut(s) | 402 |
| XmiI | GTMKAC | 2 cut(s) | 96, 3442 |
| ZrmI | AGTACT | 2 cut(s) | 74, 3027 |
| Zsp2I | ATGCAT | 2 cut(s) | 317, 1458 |