RchiOBHm_Chr1g0320891

disease resistance

Basic Information

Type: gene
Biological Identity
rosa_chinensis
1
Physical Location & Seq
Reverse (-)
8414596 .. 8428477
13882 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ55099

Sequence Viewer

Length: 4104 bp
ATGGCGGTGGGAGAGATCTTTCTTGCGGCATTCCTTCAGTTGCTGCTGGACAGGTTAACGCCTGGGGAGATCCTTGGCTACTTCGGAAGCTTGGGAGGAGTTGGCAAAGAGCTGCAGAAATGGAAGGGAACACTGTCCGCAATTGCAGCGGTGCTTTACGATGCGGAGGAGAAGCAGCTGACTAGCAAGGCAGTGGATCTGTGGCTAAATGACCTCAGACACTTGGCTTACGATATCGACGATCTACTCAACACCTTTTCTAATGAGATGTTAGAACGCGAGCAGCTCAAGCTTCACCAAACTGGCACAAGCAAGGTACGAGGCTTCTTTACCAAAGTTCCTCACAAAGTTAAATTCAACTTCAATATGAACTCTGAAATAGACGACATTGCTAAACGCTTGCAAGACATATTTGACCGGAAAGAGAAACTCGGTTTGAAATATATTGAGCATACCCCTACTTCAACATCATCATCGCACAGGACACCAAGTTCATATGTGTTGGATGGATCTGTGGTTGGGAGAGATGAAGACGCAGGAAAGATTGTGGAATTGTTGTCCAGAAATGCTGATCCTTCTTCTCCCACAAATTATCAAGTTGTTGCCATCGTTGGTATGGGTGGACTCGGCAAGACAACGCTTGCGGGACGAGTCTTCAATGATGTAGCAATGGAACAGTTTAATCTCAAGATCTGGGTTTCAGTATCCGATAACTTTGATCTTCACACGGTGACGAGAGCTATTTTTAAGGAAGTTACATCTCGGCCTTGTGATATGGATGAGTTCAGTCGACTTCAAGATAATCTGAGCAAGAAGATCGATGGTAAAAGGTTTTTGATTGTTTTAGATGATGTCTGGAGAACTTGTGGTTATGATTCATGGACAAAACTGCAAGCGCCCTTCCGTGGGGGAGCTAAGGGAAGTAAGATAATGGTGACAACACGTGACGAAAAAGTTGCAATATTGATGGGAGCCCCAGCCGGTGATGTTTATCACTTAAAGACTCTATCAGAAGAAGATTGTTTGCAAGTATTTGAGCAGCATGTTAGCAACGACAGGCCACCGAATTATGACTTGCTTAAGAAGAAAATTGTAACAAACTGCAATGGATTGCCATTGGCTGCAAAAACTCTTGGTGGCGTTTTACGTTGTAACAAAACTGACAAGTGGGAGGAAATACTGAATGATAAATTATGGAGTATATCAGATGGGAGTAATATACTCCCAGTACTCAGATTGAGTTATCATTATCTCCCTTCACCTTTGAAGAGGTGCTTTGCCTATTGCTCAATACTTCCCAATGACTATGAATTTGGGAAAACCCAATTAATCCTTCTGTGGATGGCAGAGGGTTTCCTTGAGCAAACAGAAGGGACTAAAGGAATGGAAGATATCGGTGACGAATATTTTGGGGAGCTATTGTCTCGGTCATTATTTCAAACCTCGGGCAAAAACAGTTCATGCTATGTAATGCATGACCTTGTTGGTGACTTGGCACGATGGGCTGCTGCAGACACATTTTGCAGATTGGAGGATAAACTGCATGGTAGATGTTCTGCAAAGACTCACCATCTGGCTTACATTTCTAGTAAGTTCGATGGGGTAAAAAGATTTGAGACATTTTCTGAAGCCAAACGCTTGCGGACTTTCCTACCACTTCCTGTTTCCGGTGGTTATGAGAATTATCTAACTCATTATGCTACTTCTGATTTATTGCCACAATTGAAGTACTTGCGGGTGCTCTCCTTCAATGGCTATAAACTGACCGAGGTGCCAAATTCCGTAGGTAAGTTGAGACATCTACGGTACCTTGATCTTTCTCACACATTAATAACGTGTTTGCCTGAGTCAACATGCATGCTTTACAACTTACAGACGTTAATATTAGAGAATTGTTCAAAATTGAAGACACTACCTTCAAACATGAGCAATTTATCTAATTTACGTCATCTCAACAATTCAAACATGCCATCATTGGAAGAAATGCCTCCCAAAGTAAGTCGGTTGGCTCATCTGCGAACTTTGCCTAATTTTGTGGTGGGGAAAGGTAGTGCATCAGGGATTGGAGAGATACAGTCATTGCATCTTCGTGGGACCTTGAGTGTTGTCAGATTGGAAAATGTGATTGATGTTGGGGATGCGAAGATGGCTCAAATAATGAACAAGGAAGGGCTGGAAATCTTGCAATTGGAATGGAGCGGCACAAGCGAGAAGGAGTTGGAGGTGCTGTGCAGTTTAGAACCTCATAAAAAGCTTAAGGAGTTGACCATCAAGGGCTACAATGGTTTCGAATTTTCAAAATGGATTGGACATCCTTCATTCTCTGATATGACGTCTGTGAAATTGGAGAATTGTAAAAACTGTCGATTCTTACCTCCTCTTGGCCAATTACCTTTTCTGAAAAAACTTCAGATACAAGGACTGGCCAATGTTGAAAGTGTGGGTGCTGAGTTTTATGGAGAGTGCAGCTTGCCTTTTCCAGTGTTGGAAGTCCTGAGGTTCGAGGATATGCAAAATTGGAAGGAGTGGCTTCCTTGCAAAAGAGATGAAGAAATTCGAGTTTTCCCATGCATGGAAGATCTTTTAATCTTTAGTTGCCCCAAATTGAAAGGTTGGTTGCCCAAGAACATGGATTCATTATCACAGATGTATATTGCTGAATGTGAAGAGTTAGTGGTTTCAATAGCCAATTATAAACATCTTCGTATGCTGATCATCCACGGTTGTAAAAGGGTGGTGCACAGAAGTGGAGTTAAGTTTGAGTTACTGGAGGCCATGGGGCTTTATAATATTTCAGAGTTCAGACTCGAAATAGACGGGTTCATCAGAGGATTGCCAAAGCTTCAAGGATTGTGGATTACTGGTTGTGAAGAGTTGACATGTTTATGGGAGAATGAGGATAGGTGGCTGCAGCGTCGAATTTCCAATATTATTGGAGGCAACATATCTGACTCCCCCTCTCACTTTATTCTAGAGCTAAGAGCACTCGGTGTACTTGAGTTAACTGGATGCTCAAATCTAATTTCTTTTCCAGACGCTAGTTGGCCACCTTGCCTTGAATTTGTAAAGATGGTGTCGTGTAATTCTTTGACGCATTTCGTAAGGTATCAAGTACCGCCAAGCATAAGAAGAATAGAGATAGAAAAATGTCAAAATTTGAAACTATTAGTGAAGGATGCTTGGGAGCTAGAGAGTTGTCTGGAGGACTTGAAGATAACAGAGTGTGCATCTTTGACATCCTTATCAGGGAATGGAGGCCGACTACCCAGAACGCTCAAATATCTCGATTTAAGTGACTGTGAGCGATTGGAGTCAATAATAAAAACATTCCACGAGGACACTTGTCTTGAAAAACTCTGTATCCTAAGGTGTGCAAATCTCAAATCCTTACCAGAGGGGCTATGCCATCTCTCCGCTCTTCGCATGTTATGGATAGAGGAATGTGGAAGTCTCGTTTCCTTCCCAAGAGGAGGGTGGCCATCCAACCTGGCATGCTTGTCTATCTCCATTTGTGCTCAATTGGAAGCCCTCCCCAGAGGCATGGACAACCTCAGCTCTCTTCAGATTTTGTTGTTGAGATACTGTGGAGGTTTGGCATCCATTCTAAAAGAGGGTTTCCCACCCAACCTAATTAATCTGGAAATTGGCCATCCCGAAAGCTGCAATCCTCTCTCAGAGTGGGGGCTTCACCACTTGGACAGACTCACCTCTCTTGAAACCTTTTCTATCTTCAGTGTCAATCCAGATGTGGTGTCCTTTCCGCCAAAGGAGGTGCTGCTCCCTAAATCTCTCATTAAACTCGACATTGCAGGCTTCCCAAATCTGAAGCGCCTGTCATCATCTTTTCAATCACTCACCTCTCTTGAATCCCTTGAAATTCTTGGATGCCCAAAGCTAGCATCTATTATTCCAGAACAAGGGGATCATCTGCCTCCTTCACTTACACAGCTTCGCATCCGTGAGGGCTGTCCACTGCTCACAAAGAAATACAAACCAGGTAAAGGACGACACTGGCCCAAACAAATTGCCCACATCCCTTACGTTTATGTTGGAGGCTGCGATGACGAAGCCGAAGCCGAAGCCGAAGCCGACCGCCGGGCATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

1367

Amino Acids

153.96

Weight (kDa)

6.37

Isoelectric Point (pI)

48.17

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Rx_N PF18052 10 - 99 8.4e-19 Rx N-terminal domain
NB-ARC PF00931 179 - 351 1.9e-36 NB-ARC domain
WHD_DRP PF23559 431 - 499 3.5e-23 Disease resistance protein Winged helix domain
LRR_14 PF23598 572 - 837 2.6e-22 Leucine-rich repeat region
LRR_R13L1-DRL21 PF25019 688 - 807 1.1e-33 R13L1/DRL21 LRRs
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000070)

Species Orthologous Gene IDs
fragaria_vesca FvH4_7g00360 FvH4_7g00850 FvH4_7g02400 FvH4_7g02430 FvH4_7g02450 FvH4_7g25671 FvH4_7g25680 FvH4_7g25683 FvH4_7g26980 FvH4_7g27330 FvH4_7g27355 FvH4_7g27610 FvH4_7g27642 FvH4_7g27890 FvH4_7g27891 FvH4_7g27891 FvH4_7g27891 FvH4_7g28110 FvH4_7g28390
malus_domestica MD00G1070800.v1.1 MD00G1168000.v1.1 MD00G1168300.v1.1 MD00G1168700.v1.1 MD02G1293100.v1.1 MD02G1293200.v1.1 MD02G1314300.v1.1 MD03G1009000.v1.1 MD03G1009400.v1.1 MD03G1042300.v1.1 MD03G1042400.v1.1 MD07G1033600.v1.1 MD07G1033700.v1.1 MD07G1033900.v1.1 MD11G1011400.v1.1 MD11G1011700.v1.1 MD11G1029800.v1.1 MD11G1029900.v1.1 MD11G1030300.v1.1 MD11G1030400.v1.1 MD11G1030500.v1.1 MD11G1031300.v1.1 MD11G1031600.v1.1 MD11G1032000.v1.1 MD11G1033200.v1.1 MD11G1033600.v1.1 MD11G1033800.v1.1 MD11G1033900.v1.1 MD11G1034100.v1.1 MD11G1034400.v1.1 MD11G1040600.v1.1 MD11G1041100.v1.1 MD11G1043100.v1.1 MD11G1043500.v1.1 MD11G1044500.v1.1 MD11G1045100.v1.1 MD11G1045600.v1.1
prunus_persica Prupe.2G022400_v2.0.a1 Prupe.2G022400_v2.0.a1 Prupe.2G022400_v2.0.a1 Prupe.2G022500_v2.0.a1 Prupe.2G022500_v2.0.a1 Prupe.2G022900_v2.0.a1 Prupe.2G023500_v2.0.a1 Prupe.2G023500_v2.0.a1 Prupe.2G023500_v2.0.a1 Prupe.2G023500_v2.0.a1 Prupe.2G023500_v2.0.a1 Prupe.2G023500_v2.0.a1 Prupe.2G023600_v2.0.a1 Prupe.2G028000_v2.0.a1 Prupe.2G030200_v2.0.a1 Prupe.2G067600_v2.0.a1 Prupe.8G117900_v2.0.a1
pyrus_communis pycom02g26350 pycom03g03270 pycom07g02370 pycom11g00750 pycom11g00790 pycom11g02340 pycom11g02370 pycom11g02380 pycom11g02390 pycom11g02410 pycom11g02460 pycom11g02470 pycom11g02500 pycom11g02510 pycom11g02520 pycom11g02530 pycom11g02580 pycom11g02590 pycom11g02680 pycom11g02710 pycom11g02720 pycom11g02730 pycom11g02750 pycom11g02760 pycom11g02770 pycom11g03690 pycom13g25120 pycom13g25130 pycom13g25140 pycom13g25170 pycom13g25180 pycom13g25190 pycom13g25210
rosa_chinensis RchiOBHm_Chr1g0315001 RchiOBHm_Chr1g0315411 RchiOBHm_Chr1g0317951 RchiOBHm_Chr1g0319741 RchiOBHm_Chr1g0319841 RchiOBHm_Chr1g0319911 RchiOBHm_Chr1g0319991 RchiOBHm_Chr1g0320001 RchiOBHm_Chr1g0320021 RchiOBHm_Chr1g0320081 RchiOBHm_Chr1g0320111 RchiOBHm_Chr1g0320131 RchiOBHm_Chr1g0320161 RchiOBHm_Chr1g0320171 RchiOBHm_Chr1g0320241 RchiOBHm_Chr1g0320281 RchiOBHm_Chr1g0320411 RchiOBHm_Chr1g0320461 RchiOBHm_Chr1g0320551 RchiOBHm_Chr1g0320581 RchiOBHm_Chr1g0320661 RchiOBHm_Chr1g0320891 RchiOBHm_Chr1g0320971 RchiOBHm_Chr1g0321021 RchiOBHm_Chr1g0321031 RchiOBHm_Chr1g0321091 RchiOBHm_Chr1g0321351 RchiOBHm_Chr1g0321481 RchiOBHm_Chr1g0321491 RchiOBHm_Chr1g0327521 RchiOBHm_Chr1g0328061 RchiOBHm_Chr1g0334991 RchiOBHm_Chr1g0373781 RchiOBHm_Chr1g0373891 RchiOBHm_Chr1g0374841 RchiOBHm_Chr2g0131111 RchiOBHm_Chr2g0131121 RchiOBHm_Chr4g0408901 RchiOBHm_Chr5g0041691 RchiOBHm_Chr7g0237021
rosa_laevigata RLG00000019168 RLG00000030456 RLG00000030460 RLG00000030571
rosa_multiflora Rmu_co7963468.1_g000001 Rmu_co7991248.1_g000001 Rmu_co8195256.1_g000001 Rmu_co8312199.1_g000001 Rmu_co8349215.1_g000001 Rmu_co8351041.1_g000001 Rmu_co8422719.1_g000001 Rmu_co8450711.1_g000001 Rmu_co8465555.1_g000001 Rmu_co8489965.1_g000001 Rmu_sc0000087.1_g000014 Rmu_sc0000272.1_g000015 Rmu_sc0000724.1_g000006 Rmu_sc0000724.1_g000021 Rmu_sc0000724.1_g000022 Rmu_sc0000861.1_g000024 Rmu_sc0001049.1_g000006 Rmu_sc0001049.1_g000007 Rmu_sc0001512.1_g000001 Rmu_sc0002022.1_g000004 Rmu_sc0002063.1_g000011 Rmu_sc0002131.1_g000024 Rmu_sc0002337.1_g000012 Rmu_sc0002341.1_g000005 Rmu_sc0002539.1_g000117 Rmu_sc0002745.1_g000005 Rmu_sc0002745.1_g000006 Rmu_sc0003145.1_g000002 Rmu_sc0003199.1_g000007 Rmu_sc0003270.1_g000039 Rmu_sc0003270.1_g000040 Rmu_sc0003423.1_g000001 Rmu_sc0003423.1_g000002 Rmu_sc0003629.1_g000067 Rmu_sc0004039.1_g000002 Rmu_sc0004555.1_g000001 Rmu_sc0004555.1_g000005 Rmu_sc0004555.1_g000006 Rmu_sc0004947.1_g000025 Rmu_sc0004947.1_g000026 Rmu_sc0005255.1_g000025 Rmu_sc0007977.1_g000016 Rmu_sc0008752.1_g000005 Rmu_sc0009236.1_g000004 Rmu_sc0009236.1_g000008 Rmu_sc0009236.1_g000009 Rmu_sc0009236.1_g000010 Rmu_sc0011424.1_g000036 Rmu_sc0013413.1_g000001 Rmu_sc0013735.1_g000002 Rmu_sc0015304.1_g000002 Rmu_sc0015304.1_g000003 Rmu_sc0015585.1_g000001 Rmu_sc0018410.1_g000001 Rmu_sc0022723.1_g000001 Rmu_sc0022723.1_g000002 Rmu_sc0022724.1_g000001 Rmu_sc0023430.1_g000001 Rmu_sc0026053.1_g000001 Rmu_sc0026429.1_g000002 Rmu_sc0026647.1_g000001 Rmu_sc0031359.1_g000001 Rmu_ssc0000042.1_g000040 Rmu_ssc0000081.1_g000001 Rmu_ssc0000300.1_g000011
rosa_roxburghii Rroxscaffold_160G00433620 Rroxscaffold_160G00433990 Rroxscaffold_1G00038820 Rroxscaffold_2G00113190 Rroxscaffold_4G00283240 Rroxscaffold_4G00283930 Rroxscaffold_4G00284010 Rroxscaffold_4G00322600 Rroxscaffold_4G00327710 Rroxscaffold_4G00328100 Rroxscaffold_4G00328130 Rroxscaffold_4G00331590 Rroxscaffold_5G00353280
rosa_rugosa Rorug01G0004200 Rorug01G0018800 Rorug01G0018900 Rorug01G0029900 Rorug01G0030000 Rorug01G0030000 Rorug01G0030000 Rorug01G0030200 Rorug01G0030300 Rorug01G0030800 Rorug01G0032400 Rorug01G0032900 Rorug01G0055800 Rorug01G0067600 Rorug01G0067700 Rorug01G0067800 Rorug01G0067900 Rorug01G0068000 Rorug01G0379500 Rorug01G0379600 Rorug01G0379600 Rorug01G0385200 Rorug01G0385300 Rorug02G0295100 Rorug04G0088500 Rorug04G0088600 Rorug05G0194900 Rorug07G0301400
rosa_samantha Rh1AG014800 Rh1AG015200 Rh1AG030500 Rh1AG041800 Rh1AG042300 Rh1AG042700 Rh1AG042800 Rh1AG042900 Rh1AG045000 Rh1AG085100 Rh1AG085200 Rh1AG388600 Rh1AG396700 Rh1AG396900 Rh1BG007300 Rh1BG039200 Rh1BG039600 Rh1BG042800 Rh1BG067300 Rh1BG109700 Rh1BG109900 Rh1BG354000 Rh1CG043800 Rh1CG044400 Rh1DG008600 Rh1DG022900 Rh1DG023400 Rh1DG023600 Rh1DG023900 Rh1DG024100 Rh1DG024400 Rh1DG024500 Rh1DG025500 Rh1DG025700 Rh1DG026500 Rh1DG026800 Rh1DG038900 Rh1DG048800 Rh1DG049300 Rh1DG051700 Rh1DG052000 Rh1DG146200 Rh1DG383500 Rh2BG354900 Rh2CG333600 Rh4BG149600 Rh4BG149700 Rh4CG160600
rosa_wichuraiana Rw0G001100 Rw0G001130 Rw0G001180 Rw0G012580 Rw1G003480 Rw1G003540 Rw1G003600 Rw1G003640 Rw1G003670 Rw1G003750 Rw1G003940 Rw1G006650 Rw1G034550 Rw1G034560 Rw1G034650 Rw1G034660 Rw1G035170 Rw1G035190 Rw1G037060 Rw2G028210 Rw4G012540 Rw5G026370 Rw7G037900

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 2694, 2787
AatII GACGTC 1 cut(s) 2336
Acc65I GGTACC 1 cut(s) 1806
AccB1I GGYRCC 2 cut(s) 1771, 1806
AccBSI CCGCTC 2 cut(s) 2199, 3416
AccI GTMKAC 1 cut(s) 790
AccII CGCG 1 cut(s) 279
AclWI GGATC 5 cut(s) 64, 204, 517, 566, 3930
AcoI YGGCCR 5 cut(s) 2383, 2424, 3044, 3476, 3646
AcsI RAATTY 9 cut(s) 353, 1310, 1777, 2291, 2553, 2919, 3059, 3154, 3876
AcuI CTGAAG 6 cut(s) 20, 1647, 2393, 3545, 3715, 3845
AcvI CACGTG 1 cut(s) 944
AcyI GRCGYC 1 cut(s) 2333
AdeI CACNNNGTG 2 cut(s) 730, 2990
AfaI GTAC 6 cut(s) 318, 1230, 1730, 1808, 2994, 3114
AflII CTTAAG 2 cut(s) 1079, 2255
AflIII ACRYGT 3 cut(s) 941, 1835, 2879
AjnI CCWGG 3 cut(s) 61, 3486, 3994
AjuI GAANNNNNNNTTGG 4 cut(s) 1317, 1349, 2379, 2411
AleI CACNNNNGTG 1 cut(s) 2745
AloI GAACNNNNNNTCC 2 cut(s) 475, 507
Alw21I GWGCWC 4 cut(s) 1743, 2742, 2986, 3517
Alw26I GTCTC 4 cut(s) 1428, 1610, 1789, 3455
Alw44I GTGCAC 1 cut(s) 2738
AlwI GGATC 5 cut(s) 64, 204, 517, 566, 3930
AlwNI CAGNNNCTG 1 cut(s) 43
Ama87I CYCGRG 1 cut(s) 1444
ApaLI GTGCAC 1 cut(s) 2738
ApoI RAATTY 9 cut(s) 353, 1310, 1777, 2291, 2553, 2919, 3059, 3154, 3876
ArsI GACNNNNNNTTYG 4 cut(s) 1295, 1327, 1391, 1423
AseI ATTAAT 3 cut(s) 1328, 1829, 3633
Asp700I GAANNNNTTC 1 cut(s) 2553
Asp718I GGTACC 1 cut(s) 1806
AspLEI GCGC 2 cut(s) 898, 3831
AspS9I GGNCC 2 cut(s) 2094, 4014
AsuC2I CCSGG 1 cut(s) 4097
AsuII TTCGAA 1 cut(s) 2289
AsuNHI GCTAGC 1 cut(s) 3895
AvaI CYCGRG 1 cut(s) 1444
AvaII GGWCC 1 cut(s) 2094
AxyI CCTNAGG 2 cut(s) 2495, 3365
BaeGI GKGCMC 1 cut(s) 2742
BalI TGGCCA 5 cut(s) 2385, 2426, 3046, 3478, 3648
BanI GGYRCC 2 cut(s) 1771, 1806
BanII GRGCYC 1 cut(s) 976
BauI CACGAG 1 cut(s) 3332
BbrPI CACGTG 1 cut(s) 944
BbsI GAAGAC 3 cut(s) 537, 646, 1913
Bbv12I GWGCWC 4 cut(s) 1743, 2742, 2986, 3517
BbvCI CCTCAGC 1 cut(s) 3551
BcgI CGANNNNNNTGC 4 cut(s) 799, 833, 938, 972
BciT130I CCWGG 3 cut(s) 63, 3488, 3996
BciVI GTATCC 2 cut(s) 715, 3371
BclI TGATCA 1 cut(s) 2712
BcnI CCSGG 1 cut(s) 4097
BcoDI GTCTC 4 cut(s) 1428, 1610, 1789, 3455
BfaI CTAG 6 cut(s) 183, 1587, 2972, 3039, 3188, 3896
BfmI CTRYAG 3 cut(s) 113, 1509, 2909
BfoI RGCGCY 2 cut(s) 899, 3832
BfrI CTTAAG 2 cut(s) 1079, 2255
BfuI GTATCC 2 cut(s) 715, 3371
BglII AGATCT 3 cut(s) 15, 690, 2578
BmcAI AGTACT 2 cut(s) 1230, 1730
Bme1390I CCNGG 4 cut(s) 63, 3488, 3996, 4097
Bme18I GGWCC 1 cut(s) 2094
BmeT110I CYCGRG 1 cut(s) 1444
BmgT120I GGNCC 2 cut(s) 2094, 4014
BmiI GGNNCC 4 cut(s) 973, 1773, 1808, 2095
BmrFI CCNGG 4 cut(s) 63, 3488, 3996, 4097
BmrI ACTGGG 1 cut(s) 1220
BmtI GCTAGC 1 cut(s) 3899
BmuI ACTGGG 1 cut(s) 1220
BoxI GACNNNNGTC 1 cut(s) 3342
BpiI GAAGAC 3 cut(s) 537, 646, 1913
BpmI CTGGAG 3 cut(s) 877, 2789, 3221
Bpu10I CCTNAGC 2 cut(s) 915, 3551
Bpu14I TTCGAA 1 cut(s) 2289
BpuEI CTTGAG 5 cut(s) 272, 671, 1379, 2119, 3017
BpuMI CCSGG 1 cut(s) 4097
Bsa29I ATCGAT 1 cut(s) 819
BsaAI YACGTR 1 cut(s) 944
BsaBI GATNNNNATC 1 cut(s) 990
BsaHI GRCGYC 1 cut(s) 2333
BsaJI CCNNGG 7 cut(s) 62, 73, 904, 1443, 1767, 2719, 2775
BsaWI WCCGGW 2 cut(s) 417, 1667
BsaXI ACNNNNNCTCC 6 cut(s) 850, 880, 1406, 1436, 2213, 2243
Bse118I RCCGGY 1 cut(s) 980
Bse1I ACTGG 8 cut(s) 307, 1226, 2427, 2480, 2772, 2866, 3010, 4016
Bse21I CCTNAGG 2 cut(s) 2495, 3365
Bse3DI GCAATG 5 cut(s) 387, 675, 1111, 2078, 3804
Bse8I GATNNNNATC 1 cut(s) 990
BseBI CCWGG 3 cut(s) 63, 3488, 3996
BseCI ATCGAT 1 cut(s) 819
BseDI CCNNGG 7 cut(s) 62, 73, 904, 1443, 1767, 2719, 2775
BseJI GATNNNNATC 1 cut(s) 990
BseMI GCAATG 5 cut(s) 387, 675, 1111, 2078, 3804
BseMII CTCAG 8 cut(s) 229, 797, 1246, 1836, 2439, 2486, 3565, 3687
BseNI ACTGG 8 cut(s) 307, 1226, 2427, 2480, 2772, 2866, 3010, 4016
BseRI GAGGAG 4 cut(s) 111, 182, 2367, 3483
BseSI GKGCMC 1 cut(s) 2742
BseYI CCCAGC 1 cut(s) 976
BsgI GTGCAG 2 cut(s) 2251, 2485
Bsh1236I CGCG 1 cut(s) 279
Bsh1285I CGRYCG 1 cut(s) 4093
BshNI GGYRCC 2 cut(s) 1771, 1806
BshVI ATCGAT 1 cut(s) 819
BsiEI CGRYCG 1 cut(s) 4093
BsiHKAI GWGCWC 4 cut(s) 1743, 2742, 2986, 3517
BsiHKCI CYCGRG 1 cut(s) 1444
BsiSI CCGG 4 cut(s) 418, 981, 1668, 4096
BslFI GGGAC 3 cut(s) 660, 1387, 2107
BsmAI GTCTC 4 cut(s) 1428, 1610, 1789, 3455
BsmFI GGGAC 3 cut(s) 660, 1387, 2107
BsmI GAATGC 1 cut(s) 29
BsoBI CYCGRG 1 cut(s) 1444
Bsp119I TTCGAA 1 cut(s) 2289
Bsp1286I GDGCHC 5 cut(s) 976, 1743, 2742, 2986, 3517
Bsp19I CCATGG 1 cut(s) 2775
BspCNI CTCAG 8 cut(s) 228, 798, 1245, 1837, 2440, 2487, 3564, 3686
BspDI ATCGAT 1 cut(s) 819
BspFNI CGCG 1 cut(s) 279
BspLI GGNNCC 4 cut(s) 973, 1773, 1808, 2095
BspMAI CTGCAG 3 cut(s) 117, 1513, 2913
BspOI GCTAGC 1 cut(s) 3899
BspPI GGATC 5 cut(s) 64, 204, 517, 566, 3930
BspQI GCTCTTC 1 cut(s) 3423
BspT104I TTCGAA 1 cut(s) 2289
BspT107I GGYRCC 2 cut(s) 1771, 1806
BspTI CTTAAG 2 cut(s) 1079, 2255
BsrBI CCGCTC 2 cut(s) 2199, 3416
BsrDI GCAATG 5 cut(s) 387, 675, 1111, 2078, 3804
BsrFI RCCGGY 1 cut(s) 980
BsrI ACTGG 8 cut(s) 307, 1226, 2427, 2480, 2772, 2866, 3010, 4016
BssAI RCCGGY 1 cut(s) 980
BssECI CCNNGG 7 cut(s) 62, 73, 904, 1443, 1767, 2719, 2775
BssNI GRCGYC 1 cut(s) 2333
BssSI CACGAG 1 cut(s) 3332
BssT1I CCWWGG 2 cut(s) 73, 2775
Bst2BI CACGAG 1 cut(s) 3332
Bst2UI CCWGG 3 cut(s) 63, 3488, 3996
Bst6I CTCTTC 5 cut(s) 1262, 2661, 2865, 3423, 3564
BstACI GRCGYC 1 cut(s) 2333
BstAFI CTTAAG 2 cut(s) 1079, 2255
BstBAI YACGTR 1 cut(s) 944
BstBI TTCGAA 1 cut(s) 2289
BstDSI CCRYGG 3 cut(s) 904, 2719, 2775
BstFNI CGCG 1 cut(s) 279
BstH2I RGCGCY 2 cut(s) 899, 3832
BstHHI GCGC 2 cut(s) 898, 3831
BstMAI GTCTC 4 cut(s) 1428, 1610, 1789, 3455
BstMCI CGRYCG 1 cut(s) 4093
BstMWI GCNNNNNNNGC 6 cut(s) 146, 289, 1502, 2023, 2147, 2205
BstNI CCWGG 3 cut(s) 63, 3488, 3996
BstNSI RCATGY 7 cut(s) 1046, 1857, 1861, 1969, 2883, 3427, 3495
BstPAI GACNNNNGTC 1 cut(s) 3342
BstSCI CCNGG 4 cut(s) 61, 3486, 3994, 4095
BstSFI CTRYAG 3 cut(s) 113, 1509, 2909
BstSLI GKGCMC 1 cut(s) 2742
BstUI CGCG 1 cut(s) 279
BstV2I GAAGAC 3 cut(s) 537, 646, 1913
BstX2I RGATCY 6 cut(s) 15, 69, 196, 509, 690, 2578
BstXI CCANNNNNNTGG 2 cut(s) 2629, 3541
BstYI RGATCY 6 cut(s) 15, 69, 196, 509, 690, 2578
Bsu15I ATCGAT 1 cut(s) 819
Bsu36I CCTNAGG 2 cut(s) 2495, 3365
BsuI GTATCC 2 cut(s) 715, 3371
BsuTUI ATCGAT 1 cut(s) 819
BtgI CCRYGG 3 cut(s) 904, 2719, 2775
BtgZI GCGATG 2 cut(s) 459, 4074
BtsI GCAGTG 2 cut(s) 198, 3971
BtsIMutI CAGTG 6 cut(s) 131, 198, 2487, 3739, 3971, 4009
CaiI CAGNNNCTG 1 cut(s) 43
CfoI GCGC 2 cut(s) 898, 3831
Cfr10I RCCGGY 1 cut(s) 980
Cfr13I GGNCC 2 cut(s) 2094, 4014
ClaI ATCGAT 1 cut(s) 819
CseI GACGC 4 cut(s) 542, 2903, 3044, 3100
CsiI ACCWGGT 1 cut(s) 3994
Csp6I GTAC 6 cut(s) 317, 1229, 1729, 1807, 2993, 3113
CspCI CAANNNNNGTGG 2 cut(s) 2834, 2869
CviQI GTAC 6 cut(s) 317, 1229, 1729, 1807, 2993, 3113
DraIII CACNNNGTG 2 cut(s) 730, 2990
EaeI YGGCCR 5 cut(s) 2383, 2424, 3044, 3476, 3646
Eam1104I CTCTTC 5 cut(s) 1262, 2661, 2865, 3423, 3564
EarI CTCTTC 5 cut(s) 1262, 2661, 2865, 3423, 3564
EciI GGCGGA 1 cut(s) 3750
Eco130I CCWWGG 2 cut(s) 73, 2775
Eco24I GRGCYC 1 cut(s) 976
Eco32I GATATC 2 cut(s) 235, 1393
Eco47I GGWCC 1 cut(s) 2094
Eco57I CTGAAG 6 cut(s) 20, 1647, 2393, 3545, 3715, 3845
Eco72I CACGTG 1 cut(s) 944
Eco81I CCTNAGG 2 cut(s) 2495, 3365
Eco88I CYCGRG 1 cut(s) 1444
EcoO109I RGGNCCY 1 cut(s) 2094
EcoRII CCWGG 3 cut(s) 61, 3486, 3994
EcoRV GATATC 2 cut(s) 235, 1393
EcoT14I CCWWGG 2 cut(s) 73, 2775
EcoT22I ATGCAT 3 cut(s) 1476, 1859, 2573
EcoT38I GRGCYC 1 cut(s) 976
ErhI CCWWGG 2 cut(s) 73, 2775
FalI AAGNNNNNCTT 2 cut(s) 1259, 1291
FaqI GGGAC 3 cut(s) 660, 1387, 2107
FauI CCCGC 2 cut(s) 637, 1728
FauNDI CATATG 1 cut(s) 496
FbaI TGATCA 1 cut(s) 2712
FblI GTMKAC 1 cut(s) 790
FriOI GRGCYC 1 cut(s) 976
FspBI CTAG 6 cut(s) 183, 1587, 2972, 3039, 3188, 3896
GlaI GCGC 2 cut(s) 897, 3830
GsaI CCCAGC 1 cut(s) 980
GsuI CTGGAG 3 cut(s) 877, 2789, 3221
HaeII RGCGCY 2 cut(s) 899, 3832
HapII CCGG 4 cut(s) 418, 981, 1668, 4096
HgaI GACGC 4 cut(s) 542, 2903, 3044, 3100
HhaI GCGC 2 cut(s) 898, 3831
Hin1I GRCGYC 1 cut(s) 2333
Hin6I GCGC 2 cut(s) 896, 3829
HinP1I GCGC 2 cut(s) 896, 3829
HincII GTYRAC 6 cut(s) 57, 791, 1851, 2265, 2877, 3003
HindII GTYRAC 6 cut(s) 57, 791, 1851, 2265, 2877, 3003
HindIII AAGCTT 4 cut(s) 88, 290, 2252, 2840
HpaI GTTAAC 2 cut(s) 57, 3003
HpaII CCGG 4 cut(s) 418, 981, 1668, 4096
Hpy99I CGWCG 2 cut(s) 242, 2919
HpyCH4IV ACGT 7 cut(s) 943, 1147, 1835, 1877, 1945, 2333, 4041
HpyF10VI GCNNNNNNNGC 6 cut(s) 146, 289, 1502, 2023, 2147, 2205
HpySE526I ACGT 7 cut(s) 943, 1147, 1835, 1877, 1945, 2333, 4041
Hsp92I GRCGYC 1 cut(s) 2333
HspAI GCGC 2 cut(s) 896, 3829
KpnI GGTACC 1 cut(s) 1810
Ksp22I TGATCA 1 cut(s) 2712
KspAI GTTAAC 2 cut(s) 57, 3003
LguI GCTCTTC 1 cut(s) 3423
LmnI GCTCC 6 cut(s) 911, 971, 1414, 2196, 3184, 3783
MabI ACCWGGT 1 cut(s) 3994
MaeI CTAG 6 cut(s) 183, 1587, 2972, 3039, 3188, 3896
MaeII ACGT 7 cut(s) 943, 1147, 1835, 1877, 1945, 2333, 4041
MbiI CCGCTC 2 cut(s) 2199, 3416
MfeI CAATTG 4 cut(s) 141, 1721, 2186, 3518
MflI RGATCY 6 cut(s) 15, 69, 196, 509, 690, 2578
MhlI GDGCHC 5 cut(s) 976, 1743, 2742, 2986, 3517
MlsI TGGCCA 5 cut(s) 2385, 2426, 3046, 3478, 3648
MluNI TGGCCA 5 cut(s) 2385, 2426, 3046, 3478, 3648
MlyI GAGTC 9 cut(s) 618, 660, 997, 1558, 1856, 2799, 2945, 3320, 3696
MmeI TCCRAC 5 cut(s) 483, 2199, 2466, 3507, 4030
Mox20I TGGCCA 5 cut(s) 2385, 2426, 3046, 3478, 3648
Mph1103I ATGCAT 3 cut(s) 1476, 1859, 2573
MroXI GAANNNNTTC 1 cut(s) 2553
MscI TGGCCA 5 cut(s) 2385, 2426, 3046, 3478, 3648
MslI CAYNNNNRTG 3 cut(s) 2088, 2745, 2884
Msp20I TGGCCA 5 cut(s) 2385, 2426, 3046, 3478, 3648
MspA1I CMGCKG 2 cut(s) 149, 178
MspCI CTTAAG 2 cut(s) 1079, 2255
MspI CCGG 4 cut(s) 418, 981, 1668, 4096
MspR9I CCNGG 4 cut(s) 63, 3488, 3996, 4097
MunI CAATTG 4 cut(s) 141, 1721, 2186, 3518
Mva1269I GAATGC 1 cut(s) 29
MvaI CCWGG 3 cut(s) 63, 3488, 3996
MvnI CGCG 1 cut(s) 279
MwoI GCNNNNNNNGC 6 cut(s) 146, 289, 1502, 2023, 2147, 2205
NciI CCSGG 1 cut(s) 4097
NcoI CCATGG 1 cut(s) 2775
NdeI CATATG 1 cut(s) 496
NheI GCTAGC 1 cut(s) 3895
NlaIV GGNNCC 4 cut(s) 973, 1773, 1808, 2095
NmeAIII GCCGAG 2 cut(s) 606, 742
NmuCI GTSAC 6 cut(s) 730, 934, 944, 1397, 1487, 3293
NsiI ATGCAT 3 cut(s) 1476, 1859, 2573
NspI RCATGY 7 cut(s) 1046, 1857, 1861, 1969, 2883, 3427, 3495
NspV TTCGAA 1 cut(s) 2289
OliI CACNNNNGTG 1 cut(s) 2745
PaeI GCATGC 2 cut(s) 1861, 3495
PciI ACATGT 1 cut(s) 2879
PciSI GCTCTTC 1 cut(s) 3423
PcsI WCGNNNNNNNCGW 1 cut(s) 237
PctI GAATGC 1 cut(s) 29
PdmI GAANNNNTTC 1 cut(s) 2553
PfeI GAWTC 4 cut(s) 875, 2367, 2633, 3866
PleI GAGTC 9 cut(s) 618, 659, 997, 1558, 1855, 2799, 2945, 3319, 3696
PmaCI CACGTG 1 cut(s) 944
PmlI CACGTG 1 cut(s) 944
PpsI GAGTC 9 cut(s) 618, 659, 997, 1558, 1855, 2799, 2945, 3319, 3696
Ppu21I YACGTR 1 cut(s) 944
PpuMI RGGWCCY 1 cut(s) 2094
PscI ACATGT 1 cut(s) 2879
PshAI GACNNNNGTC 1 cut(s) 3342
PshBI ATTAAT 3 cut(s) 1328, 1829, 3633
PsiI TTATAA 2 cut(s) 2694, 2787
Psp5II RGGWCCY 1 cut(s) 2094
Psp6I CCWGG 3 cut(s) 61, 3486, 3994
PspCI CACGTG 1 cut(s) 944
PspFI CCCAGC 1 cut(s) 976
PspGI CCWGG 3 cut(s) 61, 3486, 3994
PspN4I GGNNCC 4 cut(s) 973, 1773, 1808, 2095
PspPI GGNCC 2 cut(s) 2094, 4014
PspPPI RGGWCCY 1 cut(s) 2094
PstI CTGCAG 3 cut(s) 117, 1513, 2913
PstNI CAGNNNCTG 1 cut(s) 43
PsuI RGATCY 6 cut(s) 15, 69, 196, 509, 690, 2578
PvuII CAGCTG 1 cut(s) 178
RsaI GTAC 6 cut(s) 318, 1230, 1730, 1808, 2994, 3114
RsaNI GTAC 6 cut(s) 317, 1229, 1729, 1807, 2993, 3113
RseI CAYNNNNRTG 3 cut(s) 2088, 2745, 2884
SalI GTCGAC 1 cut(s) 789
SapI GCTCTTC 1 cut(s) 3423
Sau96I GGNCC 2 cut(s) 2094, 4014
ScaI AGTACT 2 cut(s) 1230, 1730
SchI GAGTC 9 cut(s) 618, 660, 997, 1558, 1856, 2799, 2945, 3320, 3696
ScrFI CCNGG 4 cut(s) 63, 3488, 3996, 4097
SduI GDGCHC 5 cut(s) 976, 1743, 2742, 2986, 3517
SexAI ACCWGGT 1 cut(s) 3994
SfcI CTRYAG 3 cut(s) 113, 1509, 2909
SfuI TTCGAA 1 cut(s) 2289
SinI GGWCC 1 cut(s) 2094
SmiMI CAYNNNNRTG 3 cut(s) 2088, 2745, 2884
SmlI CTYRAG 7 cut(s) 287, 686, 1079, 1358, 2098, 2255, 2996
SmoI CTYRAG 7 cut(s) 287, 686, 1079, 1358, 2098, 2255, 2996
SphI GCATGC 2 cut(s) 1861, 3495
SspI AATATT 5 cut(s) 963, 1406, 1884, 2791, 2929
SspMI CTAG 6 cut(s) 183, 1587, 2972, 3039, 3188, 3896
StyD4I CCNGG 4 cut(s) 61, 3486, 3994, 4095
StyI CCWWGG 2 cut(s) 73, 2775
TaiI ACGT 7 cut(s) 946, 1150, 1838, 1880, 1948, 2336, 4044
TaqII GACCGA 2 cut(s) 1416, 1781
TatI WGTACW 3 cut(s) 1228, 1728, 2992
TauI GCSGC 2 cut(s) 29, 2202
TfiI GAWTC 4 cut(s) 875, 2367, 2633, 3866
TscAI CASTG 6 cut(s) 138, 198, 2487, 3739, 3978, 4016
TseFI GTSAC 6 cut(s) 730, 934, 944, 1397, 1487, 3293
Tsp45I GTSAC 6 cut(s) 730, 934, 944, 1397, 1487, 3293
TspGWI ACGGA 3 cut(s) 893, 1771, 3947
TspRI CASTG 6 cut(s) 138, 198, 2487, 3739, 3978, 4016
Vha464I CTTAAG 2 cut(s) 1079, 2255
VneI GTGCAC 1 cut(s) 2738
VpaK11BI GGWCC 1 cut(s) 2094
VspI ATTAAT 3 cut(s) 1328, 1829, 3633
XapI RAATTY 9 cut(s) 353, 1310, 1777, 2291, 2553, 2919, 3059, 3154, 3876
XbaI TCTAGA 1 cut(s) 2971
XceI RCATGY 7 cut(s) 1046, 1857, 1861, 1969, 2883, 3427, 3495
XcmI CCANNNNNNNNNTGG 3 cut(s) 613, 3039, 3471
XmiI GTMKAC 1 cut(s) 790
XmnI GAANNNNTTC 1 cut(s) 2553
XspI CTAG 6 cut(s) 183, 1587, 2972, 3039, 3188, 3896
ZraI GACGTC 1 cut(s) 2334
ZrmI AGTACT 2 cut(s) 1230, 1730
Zsp2I ATGCAT 3 cut(s) 1476, 1859, 2573
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.