FvH4_7g27330

disease resistance

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb7
Physical Location & Seq
Reverse (-)
20456479 .. 20462630
6152 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_7g27330.t1

Sequence Viewer

Length: 4581 bp
ATGTATGAGAAACTTCTTGTTTGTCTACTACATGTGCTAGTTGGTTCTGCAACCAATTCCCAGCTCTCATTTAGGAAAGTGCAAGTGGCTTTCATATCTAGACTTTTCGCCAGAGGAGCTTCTATCCATTCATACTTGATCTATACACACCGCACTGTATGCATTATTCATCTAAAGAAGAAAGGGCTTCTTGATTTTGGACTCAGATATCCTTTGATCCATTATAGCTGGAATCAGATCGATCTGCAACAAGAATGTCTAAGAAATAATCAACTTTTCATTTTTCAATACCATCGATTGTACAAAAAAGAAACGATGGGGGAGGTTGTTCTTGGTGCATTCCTCCCGGTGCTGCTTGAGAAGTTGGCGGATCAAGAGATCACTGAGTACTTCGGACGCCTTAAGGGGGTCGACAAAAAGGTGCTGGAGAAATGGACTAGAACGTTGAGGGCCATTGAAGCGGTGCTGAGTGATGCTGAGGAGAAGCAACTAACACGAAGAGCAGTAAAAGAGTGGCTGGATGATCTCAGAGATTTGTCTTACGATCTTCAAGATGTATTGGACATATTTGATACTAAAATGCTGAAGCGGAGGATAGAAAGACAACAAGGAAGCAAAAGCAAGTTATGGAGCTCACTCTCTAAAGTTAAGTCCAATTTTGGTCTGAACTCAGCAATCAAGAAGATAAGTGATCGACTTGAGGAGATAACCACTCGAGAGAAGCAGCTTGGTTTGAAGAAACTTGGAGTGTCTAAAAAGCCATGGAAAATGCCACCCACTACTTATCAACTTGATGGACCTGTGATGGGAAGGGATGAAGCAAAGGCTAAGATTCTCTATGATTTGCTTTCAAAACAAGAGAATTATCATGTGGTTGGTATTGTCGGTACTGGAGGACTAGGAAAGACAACACTTGCTAAACATGTATTCAACGATGCTGCAACTGGCCAGTTTTCCCCAAAAGGATGGGTATCTGTGTCAGACGACTTTGACATTGTAAGGGTGGCAGCAGCCGTTTTGGAATCAGTCACGTCCTCTCCAGTTCAGGAATTGAAGGAGCTTAACTCAATTCTGGAGAAGTTGAGTAAGGAATTGGCTGGCAAGAAGTTTTTAATTGTTCTTGATGATGTCTGGCACACTTGTAGCTATGGTCAATGGACTACACTGCAGGCCTCCTTTCGTGTTGGAGCAGCTGGAAGTAAGATCATCGTGACAACACGTGACGCCAATGTCGCAAATATGATGGGAGATAGGAGCCCTTATAACTTGAACCCGATGTCAACAGATAAATGTTGGGAACTCTTTCAGCACCATGCACAGTTAAAAAACAGACCCGAAGATGTTGAGTTCCTTAAAGAGAAAATTGTAGAAAAATGCAATGGGTTACCGTTAGCTGCAAGGACACTTGGTGGGCTTTTACGTTGGAAAAGACTAGAGGAATGGGAAGACATATTAGACCACAAGATGTGGACACTATCAGACTCAGACCAGAACAAGATGGAGGATATCCGTCCAGCATTAAAACTGAGCTATCATTATCTCCCTTCAACTTTGAAACGGTGTTTCTCCTACTGTGGAATACTTCCGAATGATTATGAATTTGAGGAGATGCAATTGATCCTTTGGTGGATGGCGGAAGGTTTGATTCCGCAGCAACCCAAAGAACATAAGCAAATGGAAGATTTGGGACGTGACTATTTTCAAGAGTTGGTGTCTAGATCATTATTTCAAAAATCAAGCAAAACAGAGTCGCGATACATAATGCATGACCTGGTTACTGATTTGGCACGTTGGGCTGCAGGAAGTTCATGTTGTAGATTGGAGGATATGCAGAATTATGACTCGCAGCAACGTACATGTTTGCCCAAGGTTCGTCATTCGTCTTACATTCTTGGAAAGTATGATGGGGTTAAGAAGTTCGAGGTCTATTCTGAAGCTACATCTTTGCGAACGTTCTTACCACTTTCACCTTCATATGATCATTATCTGGCTCAGAAGGTTACTTCTGATTTATTGCCCAAACTCCAATACTTACGACTCCTCTCTTTGAAAAGTTATGAAATAATCGAGTTGCCAGATACAATTGGTGAATTGAAGCATCTACGGTATCTTGATCTCTCCCACACTGGGATAAGAAGTTTGCCAGACTCGACAACAACTCTGTACAACTTGCAGACATTGTTATTGGAAAGTTGTCACCAGTTGAAGGCACTGCCCACAAGCATGAGGAACCTAGTTAATTTGCGTCATCTCAACAATTCAGAGACATCTTCGTTGGAAGAAATGCCTCCTCAGCTCGGTCAATTGACTAACCTCCAAACATTGCCTGAGTTTGTTATTGGCAAAGGTAGTGGATCAGGAGTAAGAGAGATTGAGTCATTATTGCATCTGCAAGGGACATTGCACATCTCAAGACTAGAAAATGTGATTCGTGTCGAGGATGCCAGGAGTGCCAACTTAAAGAGCAAGGAAAGGCTTGAAGCCCTATTTCTTGAATGGTCTTCTTCGACTGTCTCAACAGAAGATGCAGCAATTGTGCTTGACATGTTACAACCTCATAGCAAGCTCAAAGAGCTCACCATCAAAGGTTATGGTGGATTGAAATTTTCAACATGGATTGGGAATCCTTCATTCACTAAAATGGTGCGGGTAAAGTTAGAAGGTTGTAATCATTGTCAATTCTTGCCACCATTCGGACAGTTGCCTTGTCTCAAAGAACTTTGTATACAAGAAATGGATGCAGTGGAGAGTGTTGGTGTTGAGTTTTATGGAGAAGGTGACTTGTCGTTTCAAGCTTTAGAGACCCTTGAGTTTTGGAATCTGAAAAATTGGAAGAATTGGTATCCTTGCCAACAAAGTGAGGGGGTTGAAGTTTTCTCTTGCCTGAAAAGGCTTTCCATCAGGGGCTGCCCCAAATTAGAGGGTGATTTACCAGAGAATCTTGATTCATTAGCACAGCTTAGGATATATGGATGTGAGGAATTGGTTGTTTCAGTATCCAAATACAGACAGCTTCATGGATCAATCATTGAAAAGTGCAAGATGGTGGTGTACGACACAAGTACGGTTCGGTTTGACTTACTAGAGAGTTTGACATTTTCAAATGTATCAGAATTGAGATTCCAAACAGAGGCGTTCATGAAAAGCTTGAAAAATGTTAAAGAGTTGAAGATCACTCGTTGTGAGGAGCTTACATGTTGCTTTCAAAACGAGGATAGATTACTGCAACACTTGATTTCTCTTGGTCGTCTGTATATCGAAGACAACTCGATCCTTGTTGAAAAGCTAGGGATTGAAGTAGAACAGTTGGTGCAATTGCAAATCCTGGATTGCAATATTGAATGTCTGGAATTAAGCAAGTGTGGAAGCCTTGTGAAGGTACCAGAAAGATTGCATCACCTTAGATCACTTCAAGAGCTGCACATAAGTAAATGTTCAAGTCTTGTTTCTTTTCCGGATGTTGGTCTGCCACCTTGTCTCCAAGTCATAGAGATTAAGGGCTGCGATTCTCTTTCGCACTTTGCAAAATACCAGATTCCTCCCAGCCTAAAAAGAATAGAGATTGAGAATTGTGAGAATTTAAAGTCATTAATAGAGAAAGAGGAGGAGGAGGTGGGTAACGGTTCTTCTTCTTCTTGTCTTGAGCGTTTGACGATAAATGAATGTCCCTCTTTGATGTGCTTATTATGCAAAAATCAATTACCCAGGTCTCTTAAACAGCTTGAGATAGTGTTTTGTGGACAGCTGGAGCTAATAACTGAGAGGTTCCTCGATGACAGCTGCCAACTCGAGTTAATTTACATCTGGGACTGCCCAAACCTGAAATCCTTACCCGAGGGAGTGTGCCACCTCACCAATCTTCAGTCATTAATTGTTTATGATTGTCAAAGTCTTGTTTCGTTGCCGAGAATGAATGTGTGGCCAAGAATGATACAGATCCTAAATTGCGATAAATTGGAGGTGGCACAGTTGGCGAGAGACATGATGCACACCAGTAATCTTGAAGTTGTGAGTATTGATTACTTTGAAGATTTGACAACTACAACTTCCTTCCCCACCAACCTAACATCGCTGTCAATTCTCAAGATCAAGAACTGTAAGGCGCTGATGGAATCTCAAGGGTTGCAGAGACTCGCCTCTTTGAAACGTTTGCTTCTATGGGGTGAAGATGATGGAGGTCTGGTGTCATTTCCACCTGCTGCTGAGAATTCAAAGGAGACGGAGATACTGCTCCCCAGATCTCTTGTTAATTTGAGAATTGAAGGCTTCCCAAATCTAAAGAAACTGAGCAAGGGCTTTCAATTCCTCACCTCTCTTGAACTTCTTTCCATCCTCAGCTGTCCGAAGCTTACAACCCTTCCAGTGGAGGAAGGCCTGCCTCTTTCACAACTTCGTATTCACAACTGTCCTCTACTTGAACAGAGATACAAAGGACGATACCGGCACAAGATAGCACACATCCCTTGCTCTCAACTCGATCCCTTCCGGGAAGTTTGTGATAGAAACAATATCAGCTCTGTCGAGGCATTTTGTCACAGCCAGGACCCAGGATATATGGTTCTGAGGCTGCCCTGGGAATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

1527

Amino Acids

174.5

Weight (kDa)

6.58

Isoelectric Point (pI)

51.67

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Rx_N PF18052 115 - 205 1.1e-19 Rx N-terminal domain
NB-ARC PF00931 279 - 440 1.8e-35 NB-ARC domain
WHD_DRP PF23559 527 - 596 1.2e-23 Disease resistance protein Winged helix domain
LRR_14 PF23598 672 - 944 4.2e-23 Leucine-rich repeat region
LRR_R13L1-DRL21 PF25019 789 - 912 8.6e-38 R13L1/DRL21 LRRs
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000070)

Species Orthologous Gene IDs
fragaria_vesca FvH4_7g00360 FvH4_7g00850 FvH4_7g02400 FvH4_7g02430 FvH4_7g02450 FvH4_7g25671 FvH4_7g25680 FvH4_7g25683 FvH4_7g26980 FvH4_7g27330 FvH4_7g27355 FvH4_7g27610 FvH4_7g27642 FvH4_7g27890 FvH4_7g27891 FvH4_7g27891 FvH4_7g27891 FvH4_7g28110 FvH4_7g28390
malus_domestica MD00G1070800.v1.1 MD00G1168000.v1.1 MD00G1168300.v1.1 MD00G1168700.v1.1 MD02G1293100.v1.1 MD02G1293200.v1.1 MD02G1314300.v1.1 MD03G1009000.v1.1 MD03G1009400.v1.1 MD03G1042300.v1.1 MD03G1042400.v1.1 MD07G1033600.v1.1 MD07G1033700.v1.1 MD07G1033900.v1.1 MD11G1011400.v1.1 MD11G1011700.v1.1 MD11G1029800.v1.1 MD11G1029900.v1.1 MD11G1030300.v1.1 MD11G1030400.v1.1 MD11G1030500.v1.1 MD11G1031300.v1.1 MD11G1031600.v1.1 MD11G1032000.v1.1 MD11G1033200.v1.1 MD11G1033600.v1.1 MD11G1033800.v1.1 MD11G1033900.v1.1 MD11G1034100.v1.1 MD11G1034400.v1.1 MD11G1040600.v1.1 MD11G1041100.v1.1 MD11G1043100.v1.1 MD11G1043500.v1.1 MD11G1044500.v1.1 MD11G1045100.v1.1 MD11G1045600.v1.1
prunus_persica Prupe.2G022400_v2.0.a1 Prupe.2G022400_v2.0.a1 Prupe.2G022400_v2.0.a1 Prupe.2G022500_v2.0.a1 Prupe.2G022500_v2.0.a1 Prupe.2G022900_v2.0.a1 Prupe.2G023500_v2.0.a1 Prupe.2G023500_v2.0.a1 Prupe.2G023500_v2.0.a1 Prupe.2G023500_v2.0.a1 Prupe.2G023500_v2.0.a1 Prupe.2G023500_v2.0.a1 Prupe.2G023600_v2.0.a1 Prupe.2G028000_v2.0.a1 Prupe.2G030200_v2.0.a1 Prupe.2G067600_v2.0.a1 Prupe.8G117900_v2.0.a1
pyrus_communis pycom02g26350 pycom03g03270 pycom07g02370 pycom11g00750 pycom11g00790 pycom11g02340 pycom11g02370 pycom11g02380 pycom11g02390 pycom11g02410 pycom11g02460 pycom11g02470 pycom11g02500 pycom11g02510 pycom11g02520 pycom11g02530 pycom11g02580 pycom11g02590 pycom11g02680 pycom11g02710 pycom11g02720 pycom11g02730 pycom11g02750 pycom11g02760 pycom11g02770 pycom11g03690 pycom13g25120 pycom13g25130 pycom13g25140 pycom13g25170 pycom13g25180 pycom13g25190 pycom13g25210
rosa_chinensis RchiOBHm_Chr1g0315001 RchiOBHm_Chr1g0315411 RchiOBHm_Chr1g0317951 RchiOBHm_Chr1g0319741 RchiOBHm_Chr1g0319841 RchiOBHm_Chr1g0319911 RchiOBHm_Chr1g0319991 RchiOBHm_Chr1g0320001 RchiOBHm_Chr1g0320021 RchiOBHm_Chr1g0320081 RchiOBHm_Chr1g0320111 RchiOBHm_Chr1g0320131 RchiOBHm_Chr1g0320161 RchiOBHm_Chr1g0320171 RchiOBHm_Chr1g0320241 RchiOBHm_Chr1g0320281 RchiOBHm_Chr1g0320411 RchiOBHm_Chr1g0320461 RchiOBHm_Chr1g0320551 RchiOBHm_Chr1g0320581 RchiOBHm_Chr1g0320661 RchiOBHm_Chr1g0320891 RchiOBHm_Chr1g0320971 RchiOBHm_Chr1g0321021 RchiOBHm_Chr1g0321031 RchiOBHm_Chr1g0321091 RchiOBHm_Chr1g0321351 RchiOBHm_Chr1g0321481 RchiOBHm_Chr1g0321491 RchiOBHm_Chr1g0327521 RchiOBHm_Chr1g0328061 RchiOBHm_Chr1g0334991 RchiOBHm_Chr1g0373781 RchiOBHm_Chr1g0373891 RchiOBHm_Chr1g0374841 RchiOBHm_Chr2g0131111 RchiOBHm_Chr2g0131121 RchiOBHm_Chr4g0408901 RchiOBHm_Chr5g0041691 RchiOBHm_Chr7g0237021
rosa_laevigata RLG00000019168 RLG00000030456 RLG00000030460 RLG00000030571
rosa_multiflora Rmu_co7963468.1_g000001 Rmu_co7991248.1_g000001 Rmu_co8195256.1_g000001 Rmu_co8312199.1_g000001 Rmu_co8349215.1_g000001 Rmu_co8351041.1_g000001 Rmu_co8422719.1_g000001 Rmu_co8450711.1_g000001 Rmu_co8465555.1_g000001 Rmu_co8489965.1_g000001 Rmu_sc0000087.1_g000014 Rmu_sc0000272.1_g000015 Rmu_sc0000724.1_g000006 Rmu_sc0000724.1_g000021 Rmu_sc0000724.1_g000022 Rmu_sc0000861.1_g000024 Rmu_sc0001049.1_g000006 Rmu_sc0001049.1_g000007 Rmu_sc0001512.1_g000001 Rmu_sc0002022.1_g000004 Rmu_sc0002063.1_g000011 Rmu_sc0002131.1_g000024 Rmu_sc0002337.1_g000012 Rmu_sc0002341.1_g000005 Rmu_sc0002539.1_g000117 Rmu_sc0002745.1_g000005 Rmu_sc0002745.1_g000006 Rmu_sc0003145.1_g000002 Rmu_sc0003199.1_g000007 Rmu_sc0003270.1_g000039 Rmu_sc0003270.1_g000040 Rmu_sc0003423.1_g000001 Rmu_sc0003423.1_g000002 Rmu_sc0003629.1_g000067 Rmu_sc0004039.1_g000002 Rmu_sc0004555.1_g000001 Rmu_sc0004555.1_g000005 Rmu_sc0004555.1_g000006 Rmu_sc0004947.1_g000025 Rmu_sc0004947.1_g000026 Rmu_sc0005255.1_g000025 Rmu_sc0007977.1_g000016 Rmu_sc0008752.1_g000005 Rmu_sc0009236.1_g000004 Rmu_sc0009236.1_g000008 Rmu_sc0009236.1_g000009 Rmu_sc0009236.1_g000010 Rmu_sc0011424.1_g000036 Rmu_sc0013413.1_g000001 Rmu_sc0013735.1_g000002 Rmu_sc0015304.1_g000002 Rmu_sc0015304.1_g000003 Rmu_sc0015585.1_g000001 Rmu_sc0018410.1_g000001 Rmu_sc0022723.1_g000001 Rmu_sc0022723.1_g000002 Rmu_sc0022724.1_g000001 Rmu_sc0023430.1_g000001 Rmu_sc0026053.1_g000001 Rmu_sc0026429.1_g000002 Rmu_sc0026647.1_g000001 Rmu_sc0031359.1_g000001 Rmu_ssc0000042.1_g000040 Rmu_ssc0000081.1_g000001 Rmu_ssc0000300.1_g000011
rosa_roxburghii Rroxscaffold_160G00433620 Rroxscaffold_160G00433990 Rroxscaffold_1G00038820 Rroxscaffold_2G00113190 Rroxscaffold_4G00283240 Rroxscaffold_4G00283930 Rroxscaffold_4G00284010 Rroxscaffold_4G00322600 Rroxscaffold_4G00327710 Rroxscaffold_4G00328100 Rroxscaffold_4G00328130 Rroxscaffold_4G00331590 Rroxscaffold_5G00353280
rosa_rugosa Rorug01G0004200 Rorug01G0018800 Rorug01G0018900 Rorug01G0029900 Rorug01G0030000 Rorug01G0030000 Rorug01G0030000 Rorug01G0030200 Rorug01G0030300 Rorug01G0030800 Rorug01G0032400 Rorug01G0032900 Rorug01G0055800 Rorug01G0067600 Rorug01G0067700 Rorug01G0067800 Rorug01G0067900 Rorug01G0068000 Rorug01G0379500 Rorug01G0379600 Rorug01G0379600 Rorug01G0385200 Rorug01G0385300 Rorug02G0295100 Rorug04G0088500 Rorug04G0088600 Rorug05G0194900 Rorug07G0301400
rosa_samantha Rh1AG014800 Rh1AG015200 Rh1AG030500 Rh1AG041800 Rh1AG042300 Rh1AG042700 Rh1AG042800 Rh1AG042900 Rh1AG045000 Rh1AG085100 Rh1AG085200 Rh1AG388600 Rh1AG396700 Rh1AG396900 Rh1BG007300 Rh1BG039200 Rh1BG039600 Rh1BG042800 Rh1BG067300 Rh1BG109700 Rh1BG109900 Rh1BG354000 Rh1CG043800 Rh1CG044400 Rh1DG008600 Rh1DG022900 Rh1DG023400 Rh1DG023600 Rh1DG023900 Rh1DG024100 Rh1DG024400 Rh1DG024500 Rh1DG025500 Rh1DG025700 Rh1DG026500 Rh1DG026800 Rh1DG038900 Rh1DG048800 Rh1DG049300 Rh1DG051700 Rh1DG052000 Rh1DG146200 Rh1DG383500 Rh2BG354900 Rh2CG333600 Rh4BG149600 Rh4BG149700 Rh4CG160600
rosa_wichuraiana Rw0G001100 Rw0G001130 Rw0G001180 Rw0G012580 Rw1G003480 Rw1G003540 Rw1G003600 Rw1G003640 Rw1G003670 Rw1G003750 Rw1G003940 Rw1G006650 Rw1G034550 Rw1G034560 Rw1G034650 Rw1G034660 Rw1G035170 Rw1G035190 Rw1G037060 Rw2G028210 Rw4G012540 Rw5G026370 Rw7G037900

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1263
AarI CACCTGC 1 cut(s) 4204
AasI GACNNNNNNGTC 1 cut(s) 1229
Acc36I ACCTGC 1 cut(s) 4204
Acc65I GGTACC 1 cut(s) 3379
AccB1I GGYRCC 1 cut(s) 3379
AccI GTMKAC 3 cut(s) 25, 411, 2725
AccII CGCG 1 cut(s) 1753
AccIII TCCGGA 1 cut(s) 3454
AciI CCGC 7 cut(s) 151, 368, 461, 589, 1634, 1649, 2647
AclI AACGTT 3 cut(s) 443, 1952, 4147
AclWI GGATC 8 cut(s) 211, 378, 1612, 2362, 3028, 3265, 3931, 4472
AcoI YGGCCR 2 cut(s) 946, 3920
AcsI RAATTY 4 cut(s) 1598, 2603, 3577, 4207
AcuI CTGAAG 3 cut(s) 605, 1953, 3845
AcvI CACGTG 1 cut(s) 1220
AcyI GRCGYC 2 cut(s) 397, 1224
AdeI CACNNNGTG 1 cut(s) 1409
AfaI GTAC 8 cut(s) 302, 389, 889, 1855, 2165, 3053, 3064, 3381
AflII CTTAAG 1 cut(s) 401
AflIII ACRYGT 6 cut(s) 31, 922, 1217, 1856, 2544, 3194
AjiI CACGTC 2 cut(s) 1032, 1691
AjnI CCWGG 7 cut(s) 1770, 2444, 3324, 3704, 4539, 4546, 4571
AloI GAACNNNNNNTCC 2 cut(s) 4542, 4574
Alw21I GWGCWC 2 cut(s) 635, 2577
Alw26I GTCTC 9 cut(s) 2258, 2518, 2714, 2795, 3482, 3714, 3972, 4123, 4211
AlwI GGATC 8 cut(s) 211, 378, 1612, 2362, 3028, 3265, 3931, 4472
AlwNI CAGNNNCTG 1 cut(s) 2907
Ama87I CYCGRG 3 cut(s) 714, 3788, 3833
Aor13HI TCCGGA 1 cut(s) 3454
AoxI GGCC 5 cut(s) 450, 946, 1170, 3920, 4372
ApoI RAATTY 4 cut(s) 1598, 2603, 3577, 4207
AseI ATTAAT 2 cut(s) 3590, 3869
Asp700I GAANNNNTTC 1 cut(s) 1302
Asp718I GGTACC 1 cut(s) 3379
AspLEI GCGC 1 cut(s) 4105
AspS9I GGNCC 3 cut(s) 450, 797, 4543
AsuC2I CCSGG 2 cut(s) 347, 4487
AvaI CYCGRG 3 cut(s) 714, 3788, 3833
AvaII GGWCC 2 cut(s) 797, 4543
BalI TGGCCA 2 cut(s) 948, 3922
BanI GGYRCC 1 cut(s) 3379
BanII GRGCYC 3 cut(s) 635, 1259, 2577
BarI GAAGNNNNNNTAC 2 cut(s) 3610, 3642
BbrPI CACGTG 1 cut(s) 1220
BbsI GAAGAC 3 cut(s) 1452, 2493, 3267
Bbv12I GWGCWC 2 cut(s) 635, 2577
BbvCI CCTCAGC 3 cut(s) 477, 2292, 4334
BceAI ACGGC 1 cut(s) 998
BciT130I CCWGG 7 cut(s) 1772, 2446, 3326, 3706, 4541, 4548, 4573
BciVI GTATCC 2 cut(s) 2853, 3007
BclI TGATCA 1 cut(s) 1978
BcnI CCSGG 2 cut(s) 347, 4487
BcoDI GTCTC 9 cut(s) 2258, 2518, 2714, 2795, 3482, 3714, 3972, 4123, 4211
BfmI CTRYAG 2 cut(s) 1166, 1797
BfoI RGCGCY 1 cut(s) 4106
BfrI CTTAAG 1 cut(s) 401
BfuAI ACCTGC 1 cut(s) 4204
BfuI GTATCC 2 cut(s) 2853, 3007
BglII AGATCT 1 cut(s) 4238
BmcAI AGTACT 1 cut(s) 389
Bme1390I CCNGG 9 cut(s) 347, 1772, 2446, 3326, 3706, 4487, 4541, 4548, 4573
Bme18I GGWCC 2 cut(s) 797, 4543
BmeT110I CYCGRG 3 cut(s) 714, 3788, 3833
BmgBI CACGTC 2 cut(s) 1032, 1691
BmgT120I GGNCC 3 cut(s) 450, 797, 4543
BmiI GGNNCC 5 cut(s) 1256, 2231, 3381, 3767, 4545
BmrFI CCNGG 9 cut(s) 347, 1772, 2446, 3326, 3706, 4487, 4541, 4548, 4573
BmrI ACTGGG 1 cut(s) 2136
BmuI ACTGGG 1 cut(s) 2136
BpiI GAAGAC 3 cut(s) 1452, 2493, 3267
BplI GAGNNNNNCTC 2 cut(s) 1049, 1081
BpmI CTGGAG 5 cut(s) 446, 912, 1023, 1094, 3767
Bpu10I CCTNAGC 4 cut(s) 477, 2292, 2960, 4334
BpuEI CTTGAG 8 cut(s) 377, 719, 2395, 2828, 3662, 3743, 4067, 4101
BpuMI CCSGG 2 cut(s) 347, 4487
Bsa29I ATCGAT 2 cut(s) 240, 295
BsaAI YACGTR 1 cut(s) 1220
BsaBI GATNNNNATC 3 cut(s) 970, 1983, 3935
BsaHI GRCGYC 2 cut(s) 397, 1224
BsaI GGTCTC 2 cut(s) 2795, 3714
BsaJI CCNNGG 7 cut(s) 761, 1866, 3704, 3834, 4546, 4571, 4572
BsaWI WCCGGW 1 cut(s) 3454
BsaXI ACNNNNNCTCC 6 cut(s) 1021, 1051, 3462, 3492, 4167, 4197
Bse118I RCCGGY 1 cut(s) 4440
Bse1I ACTGG 8 cut(s) 895, 949, 949, 1040, 2131, 2200, 3993, 4361
Bse3DI GCAATG 3 cut(s) 1384, 2321, 2399
Bse8I GATNNNNATC 3 cut(s) 970, 1983, 3935
BseAI TCCGGA 1 cut(s) 3454
BseBI CCWGG 7 cut(s) 1772, 2446, 3326, 3706, 4541, 4548, 4573
BseCI ATCGAT 2 cut(s) 240, 295
BseDI CCNNGG 7 cut(s) 761, 1866, 3704, 3834, 4546, 4571, 4572
BseJI GATNNNNATC 3 cut(s) 970, 1983, 3935
BseMI GCAATG 3 cut(s) 1384, 2321, 2399
BseNI ACTGG 8 cut(s) 895, 949, 949, 1040, 2131, 2200, 3993, 4361
BseYI CCCAGC 2 cut(s) 60, 3542
BsgI GTGCAG 1 cut(s) 3404
Bsh1236I CGCG 1 cut(s) 1753
BshFI GGCC 5 cut(s) 452, 948, 1172, 3922, 4374
BshNI GGYRCC 1 cut(s) 3379
BshVI ATCGAT 2 cut(s) 240, 295
BsiHKAI GWGCWC 2 cut(s) 635, 2577
BsiHKCI CYCGRG 3 cut(s) 714, 3788, 3833
BsiSI CCGG 4 cut(s) 347, 3455, 4441, 4486
BslFI GGGAC 4 cut(s) 1701, 2410, 3651, 3821
BsmAI GTCTC 9 cut(s) 2258, 2518, 2714, 2795, 3482, 3714, 3972, 4123, 4211
BsmBI CGTCTC 1 cut(s) 4211
BsmFI GGGAC 4 cut(s) 1701, 2410, 3651, 3821
BsmI GAATGC 1 cut(s) 338
BsnI GGCC 5 cut(s) 452, 948, 1172, 3922, 4374
Bso31I GGTCTC 2 cut(s) 2795, 3714
BsoBI CYCGRG 3 cut(s) 714, 3788, 3833
Bsp1286I GDGCHC 3 cut(s) 635, 1259, 2577
Bsp13I TCCGGA 1 cut(s) 3454
Bsp1407I TGTACA 2 cut(s) 300, 2163
Bsp19I CCATGG 1 cut(s) 761
Bsp68I TCGCGA 1 cut(s) 1753
BspACI CCGC 7 cut(s) 151, 368, 461, 589, 1634, 1649, 2647
BspANI GGCC 5 cut(s) 452, 948, 1172, 3922, 4374
BspDI ATCGAT 2 cut(s) 240, 295
BspEI TCCGGA 1 cut(s) 3454
BspFNI CGCG 1 cut(s) 1753
BspHI TCATGA 1 cut(s) 3138
BspLI GGNNCC 5 cut(s) 1256, 2231, 3381, 3767, 4545
BspMAI CTGCAG 2 cut(s) 1170, 1801
BspMI ACCTGC 1 cut(s) 4204
BspPI GGATC 8 cut(s) 211, 378, 1612, 2362, 3028, 3265, 3931, 4472
BspQI GCTCTTC 1 cut(s) 493
BspT107I GGYRCC 1 cut(s) 3379
BspTI CTTAAG 1 cut(s) 401
BspTNI GGTCTC 2 cut(s) 2795, 3714
BsrDI GCAATG 3 cut(s) 1384, 2321, 2399
BsrFI RCCGGY 1 cut(s) 4440
BsrGI TGTACA 2 cut(s) 300, 2163
BsrI ACTGG 8 cut(s) 895, 949, 949, 1040, 2131, 2200, 3993, 4361
BssAI RCCGGY 1 cut(s) 4440
BssECI CCNNGG 7 cut(s) 761, 1866, 3704, 3834, 4546, 4571, 4572
BssNAI GTATAC 1 cut(s) 2726
BssNI GRCGYC 2 cut(s) 397, 1224
BssT1I CCWWGG 2 cut(s) 761, 1866
Bst1107I GTATAC 1 cut(s) 2726
Bst2UI CCWGG 7 cut(s) 1772, 2446, 3326, 3706, 4541, 4548, 4573
Bst6I CTCTTC 1 cut(s) 493
BstACI GRCGYC 2 cut(s) 397, 1224
BstAFI CTTAAG 1 cut(s) 401
BstAPI GCANNNNNTGC 1 cut(s) 159
BstAUI TGTACA 2 cut(s) 300, 2163
BstBAI YACGTR 1 cut(s) 1220
BstC8I GCNNGC 4 cut(s) 1099, 1170, 2564, 4376
BstDSI CCRYGG 1 cut(s) 761
BstEII GGTNACC 1 cut(s) 1383
BstENI CCTNNNNNAGG 1 cut(s) 3374
BstFNI CGCG 1 cut(s) 1753
BstH2I RGCGCY 1 cut(s) 4106
BstHHI GCGC 1 cut(s) 4105
BstMAI GTCTC 9 cut(s) 2258, 2518, 2714, 2795, 3482, 3714, 3972, 4123, 4211
BstNI CCWGG 7 cut(s) 1772, 2446, 3326, 3706, 4541, 4548, 4573
BstNSI RCATGY 5 cut(s) 35, 926, 1860, 2548, 3198
BstPI GGTNACC 1 cut(s) 1383
BstSCI CCNGG 9 cut(s) 345, 1770, 2444, 3324, 3704, 4485, 4539, 4546, 4571
BstSFI CTRYAG 2 cut(s) 1166, 1797
BstUI CGCG 1 cut(s) 1753
BstV2I GAAGAC 3 cut(s) 1452, 2493, 3267
BstX2I RGATCY 2 cut(s) 3936, 4238
BstXI CCANNNNNNTGG 1 cut(s) 966
BstYI RGATCY 2 cut(s) 3936, 4238
BstZ17I GTATAC 1 cut(s) 2726
Bsu15I ATCGAT 2 cut(s) 240, 295
BsuI GTATCC 2 cut(s) 2853, 3007
BsuRI GGCC 5 cut(s) 452, 948, 1172, 3922, 4374
BsuTUI ATCGAT 2 cut(s) 240, 295
BtgI CCRYGG 1 cut(s) 761
BtgZI GCGATG 1 cut(s) 4053
BtrI CACGTC 2 cut(s) 1032, 1691
BtsI GCAGTG 3 cut(s) 1163, 2210, 2748
BtsIMutI CAGTG 7 cut(s) 153, 381, 1163, 2124, 2210, 2748, 4368
BtuMI TCGCGA 1 cut(s) 1753
BveI ACCTGC 1 cut(s) 4204
Cac8I GCNNGC 4 cut(s) 1099, 1170, 2564, 4376
CaiI CAGNNNCTG 1 cut(s) 2907
CciI TCATGA 1 cut(s) 3138
CfoI GCGC 1 cut(s) 4105
Cfr10I RCCGGY 1 cut(s) 4440
Cfr13I GGNCC 3 cut(s) 450, 797, 4543
ClaI ATCGAT 2 cut(s) 240, 295
CseI GACGC 3 cut(s) 405, 1232, 2234
CsiI ACCWGGT 1 cut(s) 1770
Csp6I GTAC 8 cut(s) 301, 388, 888, 1854, 2164, 3052, 3063, 3380
CspCI CAANNNNNGTGG 2 cut(s) 2332, 2367
CviQI GTAC 8 cut(s) 301, 388, 888, 1854, 2164, 3052, 3063, 3380
DraI TTTAAA 1 cut(s) 3582
DraIII CACNNNGTG 1 cut(s) 1409
DrdI GACNNNNNNGTC 1 cut(s) 1229
DseDI GACNNNNNNGTC 1 cut(s) 1229
EaeI YGGCCR 2 cut(s) 946, 3920
Eam1104I CTCTTC 1 cut(s) 493
EarI CTCTTC 1 cut(s) 493
EciI GGCGGA 2 cut(s) 383, 1649
Ecl136II GAGCTC 2 cut(s) 633, 2575
Eco130I CCWWGG 2 cut(s) 761, 1866
Eco147I AGGCCT 2 cut(s) 1172, 4374
Eco24I GRGCYC 3 cut(s) 635, 1259, 2577
Eco31I GGTCTC 2 cut(s) 2795, 3714
Eco32I GATATC 2 cut(s) 209, 1507
Eco47I GGWCC 2 cut(s) 797, 4543
Eco53kI GAGCTC 2 cut(s) 633, 2575
Eco57I CTGAAG 3 cut(s) 605, 1953, 3845
Eco72I CACGTG 1 cut(s) 1220
Eco88I CYCGRG 3 cut(s) 714, 3788, 3833
Eco91I GGTNACC 1 cut(s) 1383
EcoICRI GAGCTC 2 cut(s) 633, 2575
EcoNI CCTNNNNNAGG 1 cut(s) 3374
EcoO109I RGGNCCY 1 cut(s) 4543
EcoO65I GGTNACC 1 cut(s) 1383
EcoRI GAATTC 1 cut(s) 4207
EcoRII CCWGG 7 cut(s) 1770, 2444, 3324, 3704, 4539, 4546, 4571
EcoRV GATATC 2 cut(s) 209, 1507
EcoT14I CCWWGG 2 cut(s) 761, 1866
EcoT22I ATGCAT 2 cut(s) 164, 1767
EcoT38I GRGCYC 3 cut(s) 635, 1259, 2577
ErhI CCWWGG 2 cut(s) 761, 1866
Esp3I CGTCTC 1 cut(s) 4211
FalI AAGNNNNNCTT 2 cut(s) 174, 206
FaqI GGGAC 4 cut(s) 1701, 2410, 3651, 3821
FauI CCCGC 1 cut(s) 2640
FauNDI CATATG 1 cut(s) 1975
FbaI TGATCA 1 cut(s) 1978
FblI GTMKAC 3 cut(s) 25, 411, 2725
FriOI GRGCYC 3 cut(s) 635, 1259, 2577
GlaI GCGC 1 cut(s) 4104
GsaI CCCAGC 2 cut(s) 64, 3546
GsuI CTGGAG 5 cut(s) 446, 912, 1023, 1094, 3767
HaeII RGCGCY 1 cut(s) 4106
HaeIII GGCC 5 cut(s) 452, 948, 1172, 3922, 4374
HapII CCGG 4 cut(s) 347, 3455, 4441, 4486
HgaI GACGC 3 cut(s) 405, 1232, 2234
HhaI GCGC 1 cut(s) 4105
Hin1I GRCGYC 2 cut(s) 397, 1224
Hin6I GCGC 1 cut(s) 4103
HinP1I GCGC 1 cut(s) 4103
HincII GTYRAC 2 cut(s) 412, 1281
HindII GTYRAC 2 cut(s) 412, 1281
HindIII AAGCTT 3 cut(s) 2793, 3145, 4346
HpaII CCGG 4 cut(s) 347, 3455, 4441, 4486
Hpy166II GTNNAC 7 cut(s) 26, 412, 1281, 1470, 2726, 3052, 3740
Hpy8I GTNNAC 7 cut(s) 26, 412, 1281, 1470, 2726, 3052, 3740
HpyCH4IV ACGT 9 cut(s) 443, 1031, 1219, 1420, 1690, 1789, 1852, 1952, 4147
HpySE526I ACGT 9 cut(s) 443, 1031, 1219, 1420, 1690, 1789, 1852, 1952, 4147
Hsp92I GRCGYC 2 cut(s) 397, 1224
HspAI GCGC 1 cut(s) 4103
Kpn2I TCCGGA 1 cut(s) 3454
KpnI GGTACC 1 cut(s) 3383
Ksp22I TGATCA 1 cut(s) 1978
LguI GCTCTTC 1 cut(s) 493
LmnI GCTCC 8 cut(s) 116, 630, 1057, 1187, 1254, 3187, 3748, 4236
MabI ACCWGGT 1 cut(s) 1770
MaeII ACGT 9 cut(s) 443, 1031, 1219, 1420, 1690, 1789, 1852, 1952, 4147
MfeI CAATTG 5 cut(s) 1613, 2082, 2303, 2532, 3314
MflI RGATCY 2 cut(s) 3936, 4238
MhlI GDGCHC 3 cut(s) 635, 1259, 2577
MlsI TGGCCA 2 cut(s) 948, 3922
MluNI TGGCCA 2 cut(s) 948, 3922
MlyI GAGTC 8 cut(s) 195, 1475, 1757, 1835, 2031, 2141, 2384, 4125
MmeI TCCRAC 3 cut(s) 1165, 1403, 2256
Mox20I TGGCCA 2 cut(s) 948, 3922
Mph1103I ATGCAT 2 cut(s) 164, 1767
MroI TCCGGA 1 cut(s) 3454
MroXI GAANNNNTTC 1 cut(s) 1302
MscI TGGCCA 2 cut(s) 948, 3922
MslI CAYNNNNRTG 2 cut(s) 2222, 2639
Msp20I TGGCCA 2 cut(s) 948, 3922
MspA1I CMGCKG 4 cut(s) 1193, 3745, 3780, 4338
MspCI CTTAAG 1 cut(s) 401
MspI CCGG 4 cut(s) 347, 3455, 4441, 4486
MspR9I CCNGG 9 cut(s) 347, 1772, 2446, 3326, 3706, 4487, 4541, 4548, 4573
MunI CAATTG 5 cut(s) 1613, 2082, 2303, 2532, 3314
Mva1269I GAATGC 1 cut(s) 338
MvaI CCWGG 7 cut(s) 1772, 2446, 3326, 3706, 4541, 4548, 4573
MvnI CGCG 1 cut(s) 1753
NciI CCSGG 2 cut(s) 347, 4487
NcoI CCATGG 1 cut(s) 761
NdeI CATATG 1 cut(s) 1975
NlaIV GGNNCC 5 cut(s) 1256, 2231, 3381, 3767, 4545
NmeAIII GCCGAG 1 cut(s) 3930
NmuCI GTSAC 7 cut(s) 1027, 1210, 1220, 1691, 2195, 2777, 4532
NruI TCGCGA 1 cut(s) 1753
NsiI ATGCAT 2 cut(s) 164, 1767
NspI RCATGY 5 cut(s) 35, 926, 1860, 2548, 3198
PaeR7I CTCGAG 2 cut(s) 714, 3788
PagI TCATGA 1 cut(s) 3138
PaqCI CACCTGC 1 cut(s) 4204
PasI CCCWGGG 1 cut(s) 4572
PceI AGGCCT 2 cut(s) 1172, 4374
PciI ACATGT 5 cut(s) 31, 922, 1856, 2544, 3194
PciSI GCTCTTC 1 cut(s) 493
PctI GAATGC 1 cut(s) 338
PdmI GAANNNNTTC 1 cut(s) 1302
PfoI TCCNGGA 2 cut(s) 3324, 4485
PleI GAGTC 8 cut(s) 195, 1475, 1756, 1835, 2031, 2141, 2383, 4125
PmaCI CACGTG 1 cut(s) 1220
PmlI CACGTG 1 cut(s) 1220
PpsI GAGTC 8 cut(s) 195, 1475, 1756, 1835, 2031, 2141, 2383, 4125
Ppu21I YACGTR 1 cut(s) 1220
PpuMI RGGWCCY 1 cut(s) 4543
PscI ACATGT 5 cut(s) 31, 922, 1856, 2544, 3194
PshBI ATTAAT 2 cut(s) 3590, 3869
PsiI TTATAA 1 cut(s) 1263
Psp124BI GAGCTC 2 cut(s) 635, 2577
Psp1406I AACGTT 3 cut(s) 443, 1952, 4147
Psp5II RGGWCCY 1 cut(s) 4543
Psp6I CCWGG 7 cut(s) 1770, 2444, 3324, 3704, 4539, 4546, 4571
PspCI CACGTG 1 cut(s) 1220
PspEI GGTNACC 1 cut(s) 1383
PspFI CCCAGC 2 cut(s) 60, 3542
PspGI CCWGG 7 cut(s) 1770, 2444, 3324, 3704, 4539, 4546, 4571
PspN4I GGNNCC 5 cut(s) 1256, 2231, 3381, 3767, 4545
PspPI GGNCC 3 cut(s) 450, 797, 4543
PspPPI RGGWCCY 1 cut(s) 4543
PspXI VCTCGAGB 1 cut(s) 3788
PsrI GAACNNNNNNTAC 2 cut(s) 2709, 2741
PstI CTGCAG 2 cut(s) 1170, 1801
PstNI CAGNNNCTG 1 cut(s) 2907
PsuI RGATCY 2 cut(s) 3936, 4238
PvuII CAGCTG 4 cut(s) 1193, 3745, 3780, 4338
RruI TCGCGA 1 cut(s) 1753
RsaI GTAC 8 cut(s) 302, 389, 889, 1855, 2165, 3053, 3064, 3381
RsaNI GTAC 8 cut(s) 301, 388, 888, 1854, 2164, 3052, 3063, 3380
RseI CAYNNNNRTG 2 cut(s) 2222, 2639
SacI GAGCTC 2 cut(s) 635, 2577
SalI GTCGAC 1 cut(s) 410
SapI GCTCTTC 1 cut(s) 493
Sau96I GGNCC 3 cut(s) 450, 797, 4543
ScaI AGTACT 1 cut(s) 389
SchI GAGTC 8 cut(s) 195, 1475, 1757, 1835, 2031, 2141, 2384, 4125
ScrFI CCNGG 9 cut(s) 347, 1772, 2446, 3326, 3706, 4487, 4541, 4548, 4573
SduI GDGCHC 3 cut(s) 635, 1259, 2577
SexAI ACCWGGT 1 cut(s) 1770
SfcI CTRYAG 2 cut(s) 1166, 1797
Sfr274I CTCGAG 2 cut(s) 714, 3788
SinI GGWCC 2 cut(s) 797, 4543
SlaI CTCGAG 2 cut(s) 714, 3788
SmiMI CAYNNNNRTG 2 cut(s) 2222, 2639
SseBI AGGCCT 2 cut(s) 1172, 4374
SsiI CCGC 7 cut(s) 151, 368, 461, 589, 1634, 1649, 2647
SspI AATATT 1 cut(s) 3337
SstI GAGCTC 2 cut(s) 635, 2577
StuI AGGCCT 2 cut(s) 1172, 4374
StyD4I CCNGG 9 cut(s) 345, 1770, 2444, 3324, 3704, 4485, 4539, 4546, 4571
StyI CCWWGG 2 cut(s) 761, 1866
TaiI ACGT 9 cut(s) 446, 1034, 1222, 1423, 1693, 1792, 1855, 1955, 4150
TaqII GACCGA 1 cut(s) 2288
TatI WGTACW 3 cut(s) 300, 387, 2163
TscAI CASTG 7 cut(s) 160, 388, 1170, 2131, 2217, 2748, 4368
TseFI GTSAC 7 cut(s) 1027, 1210, 1220, 1691, 2195, 2777, 4532
Tsp45I GTSAC 7 cut(s) 1027, 1210, 1220, 1691, 2195, 2777, 4532
TspGWI ACGGA 2 cut(s) 1499, 4235
TspRI CASTG 7 cut(s) 160, 388, 1170, 2131, 2217, 2748, 4368
Vha464I CTTAAG 1 cut(s) 401
VpaK11BI GGWCC 2 cut(s) 797, 4543
VspI ATTAAT 2 cut(s) 3590, 3869
XagI CCTNNNNNAGG 1 cut(s) 3374
XapI RAATTY 4 cut(s) 1598, 2603, 3577, 4207
XbaI TCTAGA 2 cut(s) 98, 1715
XceI RCATGY 5 cut(s) 35, 926, 1860, 2548, 3198
XhoI CTCGAG 2 cut(s) 714, 3788
XmiI GTMKAC 3 cut(s) 25, 411, 2725
XmnI GAANNNNTTC 1 cut(s) 1302
ZrmI AGTACT 1 cut(s) 389
Zsp2I ATGCAT 2 cut(s) 164, 1767
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.