disease resistance
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Rx_N | PF18052 | 9 - 99 | 4.1e-19 | Rx N-terminal domain |
| NB-ARC | PF00931 | 190 - 343 | 2.8e-34 | NB-ARC domain |
| WHD_DRP | PF23559 | 425 - 494 | 4.1e-22 | Disease resistance protein Winged helix domain |
| LRR_14 | PF23598 | 568 - 836 | 4.6e-21 | Leucine-rich repeat region |
| LRR_R13L1-DRL21 | PF25019 | 686 - 809 | 1.3e-36 | R13L1/DRL21 LRRs |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 1671 |
| AarI | CACCTGC | 1 cut(s) | 3889 |
| Acc36I | ACCTGC | 1 cut(s) | 3889 |
| AccB1I | GGYRCC | 1 cut(s) | 3061 |
| AccI | GTMKAC | 2 cut(s) | 93, 2416 |
| AccII | CGCG | 3 cut(s) | 928, 1758, 4152 |
| AccIII | TCCGGA | 1 cut(s) | 3136 |
| AciI | CCGC | 5 cut(s) | 53, 143, 271, 1639, 2338 |
| AclWI | GGATC | 5 cut(s) | 63, 2053, 2719, 2956, 3629 |
| AcoI | YGGCCR | 2 cut(s) | 2375, 3605 |
| AcsI | RAATTY | 3 cut(s) | 1292, 1960, 3892 |
| AcuI | CTGAAG | 6 cut(s) | 287, 1644, 1805, 1916, 3087, 3530 |
| AcyI | GRCGYC | 1 cut(s) | 82 |
| AfiI | CCNNNNNNNGG | 9 cut(s) | 494, 709, 1818, 1988, 2384, 2608, 2821, 3143, 4048 |
| AflIII | ACRYGT | 4 cut(s) | 926, 1631, 2235, 2885 |
| AhlI | ACTAGT | 1 cut(s) | 119 |
| AjiI | CACGTC | 1 cut(s) | 1385 |
| AjnI | CCWGG | 8 cut(s) | 30, 1409, 1464, 1582, 2135, 2496, 3015, 3389 |
| AleI | CACNNNNGTG | 1 cut(s) | 3108 |
| Alw21I | GWGCWC | 4 cut(s) | 317, 537, 771, 1170 |
| Alw26I | GTCTC | 8 cut(s) | 951, 2209, 2405, 2486, 3399, 3657, 3808, 3896 |
| AlwI | GGATC | 5 cut(s) | 63, 2053, 2719, 2956, 3629 |
| AlwNI | CAGNNNCTG | 3 cut(s) | 37, 749, 2598 |
| Ama87I | CYCGRG | 1 cut(s) | 3473 |
| Aor13HI | TCCGGA | 1 cut(s) | 3136 |
| AoxI | GGCC | 4 cut(s) | 132, 2375, 3605, 4057 |
| ApoI | RAATTY | 3 cut(s) | 1292, 1960, 3892 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 863, 895 |
| AseI | ATTAAT | 2 cut(s) | 3272, 4161 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 660, 4008 |
| AspLEI | GCGC | 1 cut(s) | 3790 |
| AspS9I | GGNCC | 1 cut(s) | 485 |
| AvaI | CYCGRG | 1 cut(s) | 3473 |
| AvaII | GGWCC | 1 cut(s) | 485 |
| AxyI | CCTNAGG | 1 cut(s) | 742 |
| BalI | TGGCCA | 2 cut(s) | 2377, 3607 |
| BanI | GGYRCC | 1 cut(s) | 3061 |
| BanII | GRGCYC | 2 cut(s) | 317, 771 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 3289, 3321 |
| BbsI | GAAGAC | 4 cut(s) | 628, 2184, 2958, 3152 |
| Bbv12I | GWGCWC | 4 cut(s) | 317, 537, 771, 1170 |
| BbvCI | CCTCAGC | 2 cut(s) | 159, 1329 |
| BceAI | ACGGC | 2 cut(s) | 1081, 3921 |
| BciT130I | CCWGG | 8 cut(s) | 32, 1411, 1466, 1584, 2137, 2498, 3017, 3391 |
| BciVI | GTATCC | 3 cut(s) | 1739, 2544, 2698 |
| BcoDI | GTCTC | 8 cut(s) | 951, 2209, 2405, 2486, 3399, 3657, 3808, 3896 |
| BcuI | ACTAGT | 1 cut(s) | 119 |
| BfaI | CTAG | 9 cut(s) | 120, 479, 608, 830, 1163, 1509, 1925, 2108, 2774 |
| BfmI | CTRYAG | 3 cut(s) | 720, 1491, 3339 |
| BfoI | RGCGCY | 1 cut(s) | 3791 |
| BfuAI | ACCTGC | 1 cut(s) | 3889 |
| BfuI | GTATCC | 3 cut(s) | 1739, 2544, 2698 |
| BglII | AGATCT | 3 cut(s) | 1008, 3923, 4014 |
| BmcAI | AGTACT | 3 cut(s) | 74, 463, 1161 |
| Bme1390I | CCNGG | 8 cut(s) | 32, 1411, 1466, 1584, 2137, 2498, 3017, 3391 |
| Bme18I | GGWCC | 1 cut(s) | 485 |
| BmeT110I | CYCGRG | 1 cut(s) | 3473 |
| BmgBI | CACGTC | 1 cut(s) | 1385 |
| BmgT120I | GGNCC | 1 cut(s) | 485 |
| BmiI | GGNNCC | 3 cut(s) | 1922, 3063, 3452 |
| BmrFI | CCNGG | 8 cut(s) | 32, 1411, 1466, 1584, 2137, 2498, 3017, 3391 |
| BmrI | ACTGGG | 1 cut(s) | 453 |
| BmuI | ACTGGG | 1 cut(s) | 453 |
| BpiI | GAAGAC | 4 cut(s) | 628, 2184, 2958, 3152 |
| BpmI | CTGGAG | 4 cut(s) | 14, 128, 2519, 3452 |
| Bpu10I | CCTNAGC | 3 cut(s) | 159, 1329, 1983 |
| BpuEI | CTTGAG | 7 cut(s) | 62, 401, 1029, 2086, 2672, 3347, 3786 |
| BsaBI | GATNNNNATC | 3 cut(s) | 1199, 3620, 4013 |
| BsaHI | GRCGYC | 1 cut(s) | 82 |
| BsaI | GGTCTC | 2 cut(s) | 2486, 3399 |
| BsaJI | CCNNGG | 4 cut(s) | 443, 1557, 2496, 3389 |
| BsaWI | WCCGGW | 1 cut(s) | 3136 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 971, 1001 |
| Bsc4I | CCNNNNNNNGG | 9 cut(s) | 494, 709, 1818, 1988, 2384, 2608, 2821, 3143, 4048 |
| Bse118I | RCCGGY | 1 cut(s) | 4125 |
| Bse1I | ACTGG | 4 cut(s) | 459, 2872, 3678, 4046 |
| Bse21I | CCTNAGG | 1 cut(s) | 742 |
| Bse3DI | GCAATG | 4 cut(s) | 1093, 2012, 2090, 3584 |
| Bse8I | GATNNNNATC | 3 cut(s) | 1199, 3620, 4013 |
| BseAI | TCCGGA | 1 cut(s) | 3136 |
| BseBI | CCWGG | 8 cut(s) | 32, 1411, 1466, 1584, 2137, 2498, 3017, 3391 |
| BseDI | CCNNGG | 4 cut(s) | 443, 1557, 2496, 3389 |
| BseJI | GATNNNNATC | 3 cut(s) | 1199, 3620, 4013 |
| BseLI | CCNNNNNNNGG | 9 cut(s) | 494, 709, 1818, 1988, 2384, 2608, 2821, 3143, 4048 |
| BseMI | GCAATG | 4 cut(s) | 1093, 2012, 2090, 3584 |
| BseNI | ACTGG | 4 cut(s) | 459, 2872, 3678, 4046 |
| BseRI | GAGGAG | 5 cut(s) | 176, 1313, 2891, 3299, 3302 |
| BseYI | CCCAGC | 1 cut(s) | 2977 |
| BsgI | GTGCAG | 1 cut(s) | 3086 |
| Bsh1236I | CGCG | 3 cut(s) | 928, 1758, 4152 |
| BshFI | GGCC | 4 cut(s) | 134, 2377, 3607, 4059 |
| BshNI | GGYRCC | 1 cut(s) | 3061 |
| BsiHKAI | GWGCWC | 4 cut(s) | 317, 537, 771, 1170 |
| BsiHKCI | CYCGRG | 1 cut(s) | 3473 |
| BsiSI | CCGG | 2 cut(s) | 3137, 4126 |
| BslFI | GGGAC | 4 cut(s) | 1395, 2101, 3336, 3506 |
| BslI | CCNNNNNNNGG | 9 cut(s) | 494, 709, 1818, 1988, 2384, 2608, 2821, 3143, 4048 |
| BsmAI | GTCTC | 8 cut(s) | 951, 2209, 2405, 2486, 3399, 3657, 3808, 3896 |
| BsmBI | CGTCTC | 1 cut(s) | 3896 |
| BsmFI | GGGAC | 4 cut(s) | 1395, 2101, 3336, 3506 |
| BsmI | GAATGC | 1 cut(s) | 23 |
| BsnI | GGCC | 4 cut(s) | 134, 2377, 3607, 4059 |
| Bso31I | GGTCTC | 2 cut(s) | 2486, 3399 |
| BsoBI | CYCGRG | 1 cut(s) | 3473 |
| Bsp1286I | GDGCHC | 4 cut(s) | 317, 537, 771, 1170 |
| Bsp13I | TCCGGA | 1 cut(s) | 3136 |
| Bsp1407I | TGTACA | 2 cut(s) | 1854, 2943 |
| Bsp19I | CCATGG | 1 cut(s) | 443 |
| BspACI | CCGC | 5 cut(s) | 53, 143, 271, 1639, 2338 |
| BspANI | GGCC | 4 cut(s) | 134, 2377, 3607, 4059 |
| BspEI | TCCGGA | 1 cut(s) | 3136 |
| BspFNI | CGCG | 3 cut(s) | 928, 1758, 4152 |
| BspHI | TCATGA | 1 cut(s) | 2829 |
| BspLI | GGNNCC | 3 cut(s) | 1922, 3063, 3452 |
| BspMAI | CTGCAG | 2 cut(s) | 724, 1495 |
| BspMI | ACCTGC | 1 cut(s) | 3889 |
| BspPI | GGATC | 5 cut(s) | 63, 2053, 2719, 2956, 3629 |
| BspT107I | GGYRCC | 1 cut(s) | 3061 |
| BspTNI | GGTCTC | 2 cut(s) | 2486, 3399 |
| BsrDI | GCAATG | 4 cut(s) | 1093, 2012, 2090, 3584 |
| BsrFI | RCCGGY | 1 cut(s) | 4125 |
| BsrGI | TGTACA | 2 cut(s) | 1854, 2943 |
| BsrI | ACTGG | 4 cut(s) | 459, 2872, 3678, 4046 |
| BssAI | RCCGGY | 1 cut(s) | 4125 |
| BssECI | CCNNGG | 4 cut(s) | 443, 1557, 2496, 3389 |
| BssNAI | GTATAC | 1 cut(s) | 2417 |
| BssNI | GRCGYC | 1 cut(s) | 82 |
| BssT1I | CCWWGG | 2 cut(s) | 443, 1557 |
| Bst1107I | GTATAC | 1 cut(s) | 2417 |
| Bst2UI | CCWGG | 8 cut(s) | 32, 1411, 1466, 1584, 2137, 2498, 3017, 3391 |
| BstACI | GRCGYC | 1 cut(s) | 82 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 3001 |
| BstAUI | TGTACA | 2 cut(s) | 1854, 2943 |
| BstC8I | GCNNGC | 3 cut(s) | 808, 2255, 4061 |
| BstDSI | CCRYGG | 1 cut(s) | 443 |
| BstFNI | CGCG | 3 cut(s) | 928, 1758, 4152 |
| BstH2I | RGCGCY | 1 cut(s) | 3791 |
| BstHHI | GCGC | 1 cut(s) | 3790 |
| BstMAI | GTCTC | 8 cut(s) | 951, 2209, 2405, 2486, 3399, 3657, 3808, 3896 |
| BstMWI | GCNNNNNNNGC | 9 cut(s) | 140, 941, 1487, 1984, 2141, 2263, 3001, 3372, 3656 |
| BstNI | CCWGG | 8 cut(s) | 32, 1411, 1466, 1584, 2137, 2498, 3017, 3391 |
| BstNSI | RCATGY | 4 cut(s) | 852, 1635, 2239, 2889 |
| BstSCI | CCNGG | 8 cut(s) | 30, 1409, 1464, 1582, 2135, 2496, 3015, 3389 |
| BstSFI | CTRYAG | 3 cut(s) | 720, 1491, 3339 |
| BstUI | CGCG | 3 cut(s) | 928, 1758, 4152 |
| BstV2I | GAAGAC | 4 cut(s) | 628, 2184, 2958, 3152 |
| BstX2I | RGATCY | 3 cut(s) | 1008, 3923, 4014 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 675 |
| BstYI | RGATCY | 3 cut(s) | 1008, 3923, 4014 |
| BstZ17I | GTATAC | 1 cut(s) | 2417 |
| Bsu36I | CCTNAGG | 1 cut(s) | 742 |
| BsuI | GTATCC | 3 cut(s) | 1739, 2544, 2698 |
| BsuRI | GGCC | 4 cut(s) | 134, 2377, 3607, 4059 |
| BtgI | CCRYGG | 1 cut(s) | 443 |
| BtrI | CACGTC | 1 cut(s) | 1385 |
| BtsI | GCAGTG | 2 cut(s) | 1901, 2439 |
| BtsIMutI | CAGTG | 6 cut(s) | 66, 1901, 2439, 2865, 3755, 4053 |
| BveI | ACCTGC | 1 cut(s) | 3889 |
| Cac8I | GCNNGC | 3 cut(s) | 808, 2255, 4061 |
| CaiI | CAGNNNCTG | 3 cut(s) | 37, 749, 2598 |
| CciI | TCATGA | 1 cut(s) | 2829 |
| CfoI | GCGC | 1 cut(s) | 3790 |
| Cfr10I | RCCGGY | 1 cut(s) | 4125 |
| Cfr13I | GGNCC | 1 cut(s) | 485 |
| CseI | GACGC | 3 cut(s) | 90, 934, 1925 |
| CsiI | ACCWGGT | 1 cut(s) | 1464 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 2023, 2058 |
| DraI | TTTAAA | 1 cut(s) | 1740 |
| EaeI | YGGCCR | 2 cut(s) | 2375, 3605 |
| EciI | GGCGGA | 1 cut(s) | 68 |
| Ecl136II | GAGCTC | 2 cut(s) | 315, 769 |
| Eco130I | CCWWGG | 2 cut(s) | 443, 1557 |
| Eco147I | AGGCCT | 1 cut(s) | 4059 |
| Eco24I | GRGCYC | 2 cut(s) | 317, 771 |
| Eco31I | GGTCTC | 2 cut(s) | 2486, 3399 |
| Eco32I | GATATC | 1 cut(s) | 3074 |
| Eco47I | GGWCC | 1 cut(s) | 485 |
| Eco53kI | GAGCTC | 2 cut(s) | 315, 769 |
| Eco57I | CTGAAG | 6 cut(s) | 287, 1644, 1805, 1916, 3087, 3530 |
| Eco81I | CCTNAGG | 1 cut(s) | 742 |
| Eco88I | CYCGRG | 1 cut(s) | 3473 |
| EcoICRI | GAGCTC | 2 cut(s) | 315, 769 |
| EcoRI | GAATTC | 1 cut(s) | 3892 |
| EcoRII | CCWGG | 8 cut(s) | 30, 1409, 1464, 1582, 2135, 2496, 3015, 3389 |
| EcoRV | GATATC | 1 cut(s) | 3074 |
| EcoT14I | CCWWGG | 2 cut(s) | 443, 1557 |
| EcoT22I | ATGCAT | 2 cut(s) | 1027, 1461 |
| EcoT38I | GRGCYC | 2 cut(s) | 317, 771 |
| ErhI | CCWWGG | 2 cut(s) | 443, 1557 |
| Esp3I | CGTCTC | 1 cut(s) | 3896 |
| FaqI | GGGAC | 4 cut(s) | 1395, 2101, 3336, 3506 |
| FauI | CCCGC | 1 cut(s) | 2331 |
| FblI | GTMKAC | 2 cut(s) | 93, 2416 |
| FriOI | GRGCYC | 2 cut(s) | 317, 771 |
| FspBI | CTAG | 9 cut(s) | 120, 479, 608, 830, 1163, 1509, 1925, 2108, 2774 |
| GlaI | GCGC | 1 cut(s) | 3789 |
| GsaI | CCCAGC | 1 cut(s) | 2981 |
| GsuI | CTGGAG | 4 cut(s) | 14, 128, 2519, 3452 |
| HaeII | RGCGCY | 1 cut(s) | 3791 |
| HaeIII | GGCC | 4 cut(s) | 134, 2377, 3607, 4059 |
| HapII | CCGG | 2 cut(s) | 3137, 4126 |
| HgaI | GACGC | 3 cut(s) | 90, 934, 1925 |
| HhaI | GCGC | 1 cut(s) | 3790 |
| Hin1I | GRCGYC | 1 cut(s) | 82 |
| Hin6I | GCGC | 1 cut(s) | 3788 |
| HinP1I | GCGC | 1 cut(s) | 3788 |
| HincII | GTYRAC | 1 cut(s) | 94 |
| HindII | GTYRAC | 1 cut(s) | 94 |
| HindIII | AAGCTT | 4 cut(s) | 2562, 2582, 2836, 4031 |
| HpaII | CCGG | 2 cut(s) | 3137, 4126 |
| Hpy166II | GTNNAC | 6 cut(s) | 94, 605, 1781, 2417, 2743, 3425 |
| Hpy8I | GTNNAC | 6 cut(s) | 94, 605, 1781, 2417, 2743, 3425 |
| Hpy99I | CGWCG | 1 cut(s) | 928 |
| HpyCH4IV | ACGT | 6 cut(s) | 125, 1129, 1384, 1483, 1643, 3034 |
| HpyF10VI | GCNNNNNNNGC | 9 cut(s) | 140, 941, 1487, 1984, 2141, 2263, 3001, 3372, 3656 |
| HpySE526I | ACGT | 6 cut(s) | 125, 1129, 1384, 1483, 1643, 3034 |
| Hsp92I | GRCGYC | 1 cut(s) | 82 |
| HspAI | GCGC | 1 cut(s) | 3788 |
| Kpn2I | TCCGGA | 1 cut(s) | 3136 |
| LmnI | GCTCC | 6 cut(s) | 182, 312, 896, 2878, 3433, 3921 |
| MabI | ACCWGGT | 1 cut(s) | 1464 |
| MaeI | CTAG | 9 cut(s) | 120, 479, 608, 830, 1163, 1509, 1925, 2108, 2774 |
| MaeII | ACGT | 6 cut(s) | 125, 1129, 1384, 1483, 1643, 3034 |
| MfeI | CAATTG | 5 cut(s) | 1307, 1773, 1994, 2223, 3005 |
| MflI | RGATCY | 3 cut(s) | 1008, 3923, 4014 |
| MhlI | GDGCHC | 4 cut(s) | 317, 537, 771, 1170 |
| MlsI | TGGCCA | 2 cut(s) | 2377, 3607 |
| MluI | ACGCGT | 1 cut(s) | 926 |
| MluNI | TGGCCA | 2 cut(s) | 2377, 3607 |
| MlyI | GAGTC | 8 cut(s) | 989, 1105, 1451, 1529, 1832, 2075, 3810, 3847 |
| MmeI | TCCRAC | 2 cut(s) | 874, 983 |
| Mox20I | TGGCCA | 2 cut(s) | 2377, 3607 |
| Mph1103I | ATGCAT | 2 cut(s) | 1027, 1461 |
| MroI | TCCGGA | 1 cut(s) | 3136 |
| MroXI | GAANNNNTTC | 2 cut(s) | 660, 4008 |
| MscI | TGGCCA | 2 cut(s) | 2377, 3607 |
| MslI | CAYNNNNRTG | 3 cut(s) | 1913, 2330, 3108 |
| Msp20I | TGGCCA | 2 cut(s) | 2377, 3607 |
| MspA1I | CMGCKG | 3 cut(s) | 3430, 3465, 4089 |
| MspI | CCGG | 2 cut(s) | 3137, 4126 |
| MspR9I | CCNGG | 8 cut(s) | 32, 1411, 1466, 1584, 2137, 2498, 3017, 3391 |
| MunI | CAATTG | 5 cut(s) | 1307, 1773, 1994, 2223, 3005 |
| Mva1269I | GAATGC | 1 cut(s) | 23 |
| MvaI | CCWGG | 8 cut(s) | 32, 1411, 1466, 1584, 2137, 2498, 3017, 3391 |
| MvnI | CGCG | 3 cut(s) | 928, 1758, 4152 |
| MwoI | GCNNNNNNNGC | 9 cut(s) | 140, 941, 1487, 1984, 2141, 2263, 3001, 3372, 3656 |
| NcoI | CCATGG | 1 cut(s) | 443 |
| NlaIV | GGNNCC | 3 cut(s) | 1922, 3063, 3452 |
| NmeAIII | GCCGAG | 1 cut(s) | 3615 |
| NmuCI | GTSAC | 6 cut(s) | 712, 736, 919, 1385, 1592, 2468 |
| NsiI | ATGCAT | 2 cut(s) | 1027, 1461 |
| NspI | RCATGY | 4 cut(s) | 852, 1635, 2239, 2889 |
| OliI | CACNNNNGTG | 1 cut(s) | 3108 |
| PaeR7I | CTCGAG | 1 cut(s) | 3473 |
| PagI | TCATGA | 1 cut(s) | 2829 |
| PaqCI | CACCTGC | 1 cut(s) | 3889 |
| PceI | AGGCCT | 1 cut(s) | 4059 |
| PciI | ACATGT | 3 cut(s) | 1631, 2235, 2885 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 932, 3630 |
| PctI | GAATGC | 1 cut(s) | 23 |
| PdmI | GAANNNNTTC | 2 cut(s) | 660, 4008 |
| PflFI | GACNNNGTC | 1 cut(s) | 4169 |
| PfoI | TCCNGGA | 1 cut(s) | 3015 |
| PleI | GAGTC | 8 cut(s) | 988, 1105, 1450, 1529, 1832, 2074, 3810, 3846 |
| PpsI | GAGTC | 8 cut(s) | 988, 1105, 1450, 1529, 1832, 2074, 3810, 3846 |
| PscI | ACATGT | 3 cut(s) | 1631, 2235, 2885 |
| PshBI | ATTAAT | 2 cut(s) | 3272, 4161 |
| PsiI | TTATAA | 1 cut(s) | 1671 |
| Psp124BI | GAGCTC | 2 cut(s) | 317, 771 |
| Psp6I | CCWGG | 8 cut(s) | 30, 1409, 1464, 1582, 2135, 2496, 3015, 3389 |
| PspFI | CCCAGC | 1 cut(s) | 2977 |
| PspGI | CCWGG | 8 cut(s) | 30, 1409, 1464, 1582, 2135, 2496, 3015, 3389 |
| PspN4I | GGNNCC | 3 cut(s) | 1922, 3063, 3452 |
| PspPI | GGNCC | 1 cut(s) | 485 |
| PspXI | VCTCGAGB | 1 cut(s) | 3473 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 2400, 2432 |
| PstI | CTGCAG | 2 cut(s) | 724, 1495 |
| PstNI | CAGNNNCTG | 3 cut(s) | 37, 749, 2598 |
| PsuI | RGATCY | 3 cut(s) | 1008, 3923, 4014 |
| PsyI | GACNNNGTC | 1 cut(s) | 4169 |
| PvuII | CAGCTG | 3 cut(s) | 3430, 3465, 4089 |
| RseI | CAYNNNNRTG | 3 cut(s) | 1913, 2330, 3108 |
| SacI | GAGCTC | 2 cut(s) | 317, 771 |
| SalI | GTCGAC | 1 cut(s) | 92 |
| Sau96I | GGNCC | 1 cut(s) | 485 |
| ScaI | AGTACT | 3 cut(s) | 74, 463, 1161 |
| SchI | GAGTC | 8 cut(s) | 989, 1105, 1451, 1529, 1832, 2075, 3810, 3847 |
| ScrFI | CCNGG | 8 cut(s) | 32, 1411, 1466, 1584, 2137, 2498, 3017, 3391 |
| SduI | GDGCHC | 4 cut(s) | 317, 537, 771, 1170 |
| SexAI | ACCWGGT | 1 cut(s) | 1464 |
| SfcI | CTRYAG | 3 cut(s) | 720, 1491, 3339 |
| Sfr274I | CTCGAG | 1 cut(s) | 3473 |
| SinI | GGWCC | 1 cut(s) | 485 |
| SlaI | CTCGAG | 1 cut(s) | 3473 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 1913, 2330, 3108 |
| SmlI | CTYRAG | 8 cut(s) | 41, 380, 1044, 2101, 2651, 3326, 3473, 3801 |
| SmoI | CTYRAG | 8 cut(s) | 41, 380, 1044, 2101, 2651, 3326, 3473, 3801 |
| SpeI | ACTAGT | 1 cut(s) | 119 |
| SseBI | AGGCCT | 1 cut(s) | 4059 |
| SsiI | CCGC | 5 cut(s) | 53, 143, 271, 1639, 2338 |
| SspI | AATATT | 1 cut(s) | 3028 |
| SspMI | CTAG | 9 cut(s) | 120, 479, 608, 830, 1163, 1509, 1925, 2108, 2774 |
| SstI | GAGCTC | 2 cut(s) | 317, 771 |
| StuI | AGGCCT | 1 cut(s) | 4059 |
| StyD4I | CCNGG | 8 cut(s) | 30, 1409, 1464, 1582, 2135, 2496, 3015, 3389 |
| StyI | CCWWGG | 2 cut(s) | 443, 1557 |
| TaiI | ACGT | 6 cut(s) | 128, 1132, 1387, 1486, 1646, 3037 |
| TatI | WGTACW | 6 cut(s) | 72, 461, 1159, 1854, 2753, 2943 |
| TscAI | CASTG | 6 cut(s) | 73, 1908, 2439, 2872, 3762, 4053 |
| TseFI | GTSAC | 6 cut(s) | 712, 736, 919, 1385, 1592, 2468 |
| Tsp45I | GTSAC | 6 cut(s) | 712, 736, 919, 1385, 1592, 2468 |
| TspGWI | ACGGA | 1 cut(s) | 3634 |
| TspRI | CASTG | 6 cut(s) | 73, 1908, 2439, 2872, 3762, 4053 |
| Tth111I | GACNNNGTC | 1 cut(s) | 4169 |
| VpaK11BI | GGWCC | 1 cut(s) | 485 |
| VspI | ATTAAT | 2 cut(s) | 3272, 4161 |
| XapI | RAATTY | 3 cut(s) | 1292, 1960, 3892 |
| XbaI | TCTAGA | 2 cut(s) | 829, 1508 |
| XceI | RCATGY | 4 cut(s) | 852, 1635, 2239, 2889 |
| XhoI | CTCGAG | 1 cut(s) | 3473 |
| XmiI | GTMKAC | 2 cut(s) | 93, 2416 |
| XmnI | GAANNNNTTC | 2 cut(s) | 660, 4008 |
| XspI | CTAG | 9 cut(s) | 120, 479, 608, 830, 1163, 1509, 1925, 2108, 2774 |
| ZrmI | AGTACT | 3 cut(s) | 74, 463, 1161 |
| Zsp2I | ATGCAT | 2 cut(s) | 1027, 1461 |