Rmu_sc0002539.1_g000117

disease resistance

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0002539.1
Physical Location & Seq
Reverse (-)
498704 .. 500467
1764 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0002539.1_g000117.1.cds

Sequence Viewer

Length: 1764 bp
atgacgtctgtgaaattgaagaattgtaaaaactgtcgattcttacctcctcttggccaattaccttttctgaaaaaacttcagatacaaggactggccaatgttaaaagtgtgggtgctgagttttatggagagtgcagcttgccttttccagtgttggaagacctgaggttcgaggatatggaaaattggaaggagtggcttccttgcaaaagagatgaagaaattcgagttttcccatgcatggaagagcttgccatccttggttgccccaaattgaaaggttggttgcccaagaacatggattcattatcagtgctgtatattgttgcatgtgaagagttagtggtttcaattgccaactataaacatcttcgtgggctgttcatctgctgttgtaaaagggtggtgcacagaagtggagttaagtttgagtctctggaggatatggcgcttgataatatttcagagttcagactcgaaatagacgggttcatcagaggattgccaaagcttcaaaatttgtggattactggttgtgaagagttgacacgtttatgggagaatgaggatagatggctgcagcgtcgaatttctaatattattggaggcaacatgtctgactccccctctcactttattcaagagctaagagcactcaagggacttgtgctaactggatgctcaaatctaatttcttttccagaagctagttggccaccttgtcttgaatttgtaaagatggtgtcgtgtaattctttgacatatttcgtaaggtatcaagtaccgccaagcataagaacaatagagatagaaaaatgtcaaaatttgaaactattagtgaaggatgctggggagctagagagttgtctggaggctttgaagataacagagtgtgcatctttgacatccttattaggcaaaggaggccgactacccagaacgctcaaatatctagagatacgtgactgtgaacaattggagtcaataatcaaaacattccacaatgacacatgtcttgaatgtattgagatagtgaagtgtgcaaatctcaaatccttaccagaggggctatgccatctctccgctcttcgcatgttatggatagaggaatgtttaagtctcgtttccttcccaagaggagggttgccatccaacctggcatgcttgtctatctgcagttgtgctcaattggaagccctccccagaggcatggacaaccacagctctcttcagattttgttgttgagatactgtggaggtttggcatccattctagaagagggtttcccacccaacctaattgatctggaaattggccatcccgaaagctgcaactcttactcagagtgggggcttcaccacttggacagactcacctctcttgaaaccttttctatctacagtgaagatccagatgtggtgtcctttccgccaaaggaggtgctgctccctaaatctctcgttaaactcaccattgcaggcttcccaaatctgaagcgcctgtcatcatcttttcaatcactcacctctcttgaatcccttgacattcttggatgcccaaagctagcatctattattccagaacaagaggatcatctgcctccttcacttacacagcttcgcatccgtgacggctgtccgctgctcacaaacaaataccaaccaggtaaaggacgacactggcccaaagaaatagcccacatcccttacgtttattttggagactgggaggacgaagccgaagcggaccgccgggcatag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

587

Amino Acids

66.38

Weight (kDa)

5.64

Isoelectric Point (pI)

60.65

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0000070)

Species Orthologous Gene IDs
fragaria_vesca FvH4_7g00360 FvH4_7g00850 FvH4_7g02400 FvH4_7g02430 FvH4_7g02450 FvH4_7g25671 FvH4_7g25680 FvH4_7g25683 FvH4_7g26980 FvH4_7g27330 FvH4_7g27355 FvH4_7g27610 FvH4_7g27642 FvH4_7g27890 FvH4_7g27891 FvH4_7g27891 FvH4_7g27891 FvH4_7g28110 FvH4_7g28390
malus_domestica MD00G1070800.v1.1 MD00G1168000.v1.1 MD00G1168300.v1.1 MD00G1168700.v1.1 MD02G1293100.v1.1 MD02G1293200.v1.1 MD02G1314300.v1.1 MD03G1009000.v1.1 MD03G1009400.v1.1 MD03G1042300.v1.1 MD03G1042400.v1.1 MD07G1033600.v1.1 MD07G1033700.v1.1 MD07G1033900.v1.1 MD11G1011400.v1.1 MD11G1011700.v1.1 MD11G1029800.v1.1 MD11G1029900.v1.1 MD11G1030300.v1.1 MD11G1030400.v1.1 MD11G1030500.v1.1 MD11G1031300.v1.1 MD11G1031600.v1.1 MD11G1032000.v1.1 MD11G1033200.v1.1 MD11G1033600.v1.1 MD11G1033800.v1.1 MD11G1033900.v1.1 MD11G1034100.v1.1 MD11G1034400.v1.1 MD11G1040600.v1.1 MD11G1041100.v1.1 MD11G1043100.v1.1 MD11G1043500.v1.1 MD11G1044500.v1.1 MD11G1045100.v1.1 MD11G1045600.v1.1
prunus_persica Prupe.2G022400_v2.0.a1 Prupe.2G022400_v2.0.a1 Prupe.2G022400_v2.0.a1 Prupe.2G022500_v2.0.a1 Prupe.2G022500_v2.0.a1 Prupe.2G022900_v2.0.a1 Prupe.2G023500_v2.0.a1 Prupe.2G023500_v2.0.a1 Prupe.2G023500_v2.0.a1 Prupe.2G023500_v2.0.a1 Prupe.2G023500_v2.0.a1 Prupe.2G023500_v2.0.a1 Prupe.2G023600_v2.0.a1 Prupe.2G028000_v2.0.a1 Prupe.2G030200_v2.0.a1 Prupe.2G067600_v2.0.a1 Prupe.8G117900_v2.0.a1
pyrus_communis pycom02g26350 pycom03g03270 pycom07g02370 pycom11g00750 pycom11g00790 pycom11g02340 pycom11g02370 pycom11g02380 pycom11g02390 pycom11g02410 pycom11g02460 pycom11g02470 pycom11g02500 pycom11g02510 pycom11g02520 pycom11g02530 pycom11g02580 pycom11g02590 pycom11g02680 pycom11g02710 pycom11g02720 pycom11g02730 pycom11g02750 pycom11g02760 pycom11g02770 pycom11g03690 pycom13g25120 pycom13g25130 pycom13g25140 pycom13g25170 pycom13g25180 pycom13g25190 pycom13g25210
rosa_chinensis RchiOBHm_Chr1g0315001 RchiOBHm_Chr1g0315411 RchiOBHm_Chr1g0317951 RchiOBHm_Chr1g0319741 RchiOBHm_Chr1g0319841 RchiOBHm_Chr1g0319911 RchiOBHm_Chr1g0319991 RchiOBHm_Chr1g0320001 RchiOBHm_Chr1g0320021 RchiOBHm_Chr1g0320081 RchiOBHm_Chr1g0320111 RchiOBHm_Chr1g0320131 RchiOBHm_Chr1g0320161 RchiOBHm_Chr1g0320171 RchiOBHm_Chr1g0320241 RchiOBHm_Chr1g0320281 RchiOBHm_Chr1g0320411 RchiOBHm_Chr1g0320461 RchiOBHm_Chr1g0320551 RchiOBHm_Chr1g0320581 RchiOBHm_Chr1g0320661 RchiOBHm_Chr1g0320891 RchiOBHm_Chr1g0320971 RchiOBHm_Chr1g0321021 RchiOBHm_Chr1g0321031 RchiOBHm_Chr1g0321091 RchiOBHm_Chr1g0321351 RchiOBHm_Chr1g0321481 RchiOBHm_Chr1g0321491 RchiOBHm_Chr1g0327521 RchiOBHm_Chr1g0328061 RchiOBHm_Chr1g0334991 RchiOBHm_Chr1g0373781 RchiOBHm_Chr1g0373891 RchiOBHm_Chr1g0374841 RchiOBHm_Chr2g0131111 RchiOBHm_Chr2g0131121 RchiOBHm_Chr4g0408901 RchiOBHm_Chr5g0041691 RchiOBHm_Chr7g0237021
rosa_laevigata RLG00000019168 RLG00000030456 RLG00000030460 RLG00000030571
rosa_multiflora Rmu_co7963468.1_g000001 Rmu_co7991248.1_g000001 Rmu_co8195256.1_g000001 Rmu_co8312199.1_g000001 Rmu_co8349215.1_g000001 Rmu_co8351041.1_g000001 Rmu_co8422719.1_g000001 Rmu_co8450711.1_g000001 Rmu_co8465555.1_g000001 Rmu_co8489965.1_g000001 Rmu_sc0000087.1_g000014 Rmu_sc0000272.1_g000015 Rmu_sc0000724.1_g000006 Rmu_sc0000724.1_g000021 Rmu_sc0000724.1_g000022 Rmu_sc0000861.1_g000024 Rmu_sc0001049.1_g000006 Rmu_sc0001049.1_g000007 Rmu_sc0001512.1_g000001 Rmu_sc0002022.1_g000004 Rmu_sc0002063.1_g000011 Rmu_sc0002131.1_g000024 Rmu_sc0002337.1_g000012 Rmu_sc0002341.1_g000005 Rmu_sc0002539.1_g000117 Rmu_sc0002745.1_g000005 Rmu_sc0002745.1_g000006 Rmu_sc0003145.1_g000002 Rmu_sc0003199.1_g000007 Rmu_sc0003270.1_g000039 Rmu_sc0003270.1_g000040 Rmu_sc0003423.1_g000001 Rmu_sc0003423.1_g000002 Rmu_sc0003629.1_g000067 Rmu_sc0004039.1_g000002 Rmu_sc0004555.1_g000001 Rmu_sc0004555.1_g000005 Rmu_sc0004555.1_g000006 Rmu_sc0004947.1_g000025 Rmu_sc0004947.1_g000026 Rmu_sc0005255.1_g000025 Rmu_sc0007977.1_g000016 Rmu_sc0008752.1_g000005 Rmu_sc0009236.1_g000004 Rmu_sc0009236.1_g000008 Rmu_sc0009236.1_g000009 Rmu_sc0009236.1_g000010 Rmu_sc0011424.1_g000036 Rmu_sc0013413.1_g000001 Rmu_sc0013735.1_g000002 Rmu_sc0015304.1_g000002 Rmu_sc0015304.1_g000003 Rmu_sc0015585.1_g000001 Rmu_sc0018410.1_g000001 Rmu_sc0022723.1_g000001 Rmu_sc0022723.1_g000002 Rmu_sc0022724.1_g000001 Rmu_sc0023430.1_g000001 Rmu_sc0026053.1_g000001 Rmu_sc0026429.1_g000002 Rmu_sc0026647.1_g000001 Rmu_sc0031359.1_g000001 Rmu_ssc0000042.1_g000040 Rmu_ssc0000081.1_g000001 Rmu_ssc0000300.1_g000011
rosa_roxburghii Rroxscaffold_160G00433620 Rroxscaffold_160G00433990 Rroxscaffold_1G00038820 Rroxscaffold_2G00113190 Rroxscaffold_4G00283240 Rroxscaffold_4G00283930 Rroxscaffold_4G00284010 Rroxscaffold_4G00322600 Rroxscaffold_4G00327710 Rroxscaffold_4G00328100 Rroxscaffold_4G00328130 Rroxscaffold_4G00331590 Rroxscaffold_5G00353280
rosa_rugosa Rorug01G0004200 Rorug01G0018800 Rorug01G0018900 Rorug01G0029900 Rorug01G0030000 Rorug01G0030000 Rorug01G0030000 Rorug01G0030200 Rorug01G0030300 Rorug01G0030800 Rorug01G0032400 Rorug01G0032900 Rorug01G0055800 Rorug01G0067600 Rorug01G0067700 Rorug01G0067800 Rorug01G0067900 Rorug01G0068000 Rorug01G0379500 Rorug01G0379600 Rorug01G0379600 Rorug01G0385200 Rorug01G0385300 Rorug02G0295100 Rorug04G0088500 Rorug04G0088600 Rorug05G0194900 Rorug07G0301400
rosa_samantha Rh1AG014800 Rh1AG015200 Rh1AG030500 Rh1AG041800 Rh1AG042300 Rh1AG042700 Rh1AG042800 Rh1AG042900 Rh1AG045000 Rh1AG085100 Rh1AG085200 Rh1AG388600 Rh1AG396700 Rh1AG396900 Rh1BG007300 Rh1BG039200 Rh1BG039600 Rh1BG042800 Rh1BG067300 Rh1BG109700 Rh1BG109900 Rh1BG354000 Rh1CG043800 Rh1CG044400 Rh1DG008600 Rh1DG022900 Rh1DG023400 Rh1DG023600 Rh1DG023900 Rh1DG024100 Rh1DG024400 Rh1DG024500 Rh1DG025500 Rh1DG025700 Rh1DG026500 Rh1DG026800 Rh1DG038900 Rh1DG048800 Rh1DG049300 Rh1DG051700 Rh1DG052000 Rh1DG146200 Rh1DG383500 Rh2BG354900 Rh2CG333600 Rh4BG149600 Rh4BG149700 Rh4CG160600
rosa_wichuraiana Rw0G001100 Rw0G001130 Rw0G001180 Rw0G012580 Rw1G003480 Rw1G003540 Rw1G003600 Rw1G003640 Rw1G003670 Rw1G003750 Rw1G003940 Rw1G006650 Rw1G034550 Rw1G034560 Rw1G034650 Rw1G034660 Rw1G035170 Rw1G035190 Rw1G037060 Rw2G028210 Rw4G012540 Rw5G026370 Rw7G037900

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 8
AccBSI CCGCTC 1 cut(s) 1088
AciI CCGC 6 cut(s) 788, 1086, 1433, 1643, 1748, 1753
AclWI GGATC 2 cut(s) 1406, 1602
AcoI YGGCCR 4 cut(s) 55, 96, 716, 1318
AcsI RAATTY 5 cut(s) 225, 520, 591, 731, 826
AcuI CTGAAG 3 cut(s) 65, 1217, 1517
AcyI GRCGYC 1 cut(s) 5
AfaI GTAC 1 cut(s) 786
AfiI CCNNNNNNNGG 4 cut(s) 53, 244, 1142, 1673
AflIII ACRYGT 3 cut(s) 551, 615, 1013
AjnI CCWGG 2 cut(s) 1158, 1666
AjuI GAANNNNNNNTTGG 2 cut(s) 51, 83
AleI CACNNNNGTG 1 cut(s) 417
Alw21I GWGCWC 3 cut(s) 414, 658, 1189
Alw26I GTCTC 3 cut(s) 441, 1127, 1719
Alw44I GTGCAC 1 cut(s) 410
AlwI GGATC 2 cut(s) 1406, 1602
AoxI GGCC 6 cut(s) 55, 96, 716, 928, 1318, 1685
ApaLI GTGCAC 1 cut(s) 410
ApeKI GCWGC 6 cut(s) 138, 580, 583, 1332, 1447, 1645
ApoI RAATTY 5 cut(s) 225, 520, 591, 731, 826
ArsI GACNNNNNNTTYG 2 cut(s) 155, 187
Asp700I GAANNNNTTC 1 cut(s) 225
AspLEI GCGC 2 cut(s) 454, 1503
AspS9I GGNCC 2 cut(s) 1686, 1750
AsuC2I CCSGG 1 cut(s) 1757
AsuHPI GGTGA 4 cut(s) 1352, 1369, 1465, 1519
AsuNHI GCTAGC 1 cut(s) 1567
AvaII GGWCC 1 cut(s) 1750
AxyI CCTNAGG 1 cut(s) 167
BaeGI GKGCMC 1 cut(s) 414
BalI TGGCCA 4 cut(s) 57, 98, 718, 1320
BbsI GAAGAC 1 cut(s) 168
Bbv12I GWGCWC 3 cut(s) 414, 658, 1189
BbvI GCAGC 6 cut(s) 150, 567, 595, 1319, 1434, 1632
BccI CCATC 6 cut(s) 266, 570, 736, 1086, 1159, 1329
BceAI ACGGC 1 cut(s) 1651
BciT130I CCWGG 2 cut(s) 1160, 1668
BcnI CCSGG 1 cut(s) 1757
BcoDI GTCTC 3 cut(s) 441, 1127, 1719
BfaI CTAG 5 cut(s) 711, 860, 956, 1277, 1568
BfmI CTRYAG 3 cut(s) 581, 1177, 1402
BfoI RGCGCY 2 cut(s) 455, 1504
BisI GCNGC 6 cut(s) 139, 581, 584, 1333, 1448, 1646
BlsI GCNGC 6 cut(s) 140, 582, 585, 1334, 1449, 1647
Bme1390I CCNGG 3 cut(s) 1160, 1668, 1757
Bme18I GGWCC 1 cut(s) 1750
BmgT120I GGNCC 2 cut(s) 1686, 1750
BmrFI CCNGG 3 cut(s) 1160, 1668, 1757
BmrI ACTGGG 1 cut(s) 1738
BmsI GCATC 7 cut(s) 671, 838, 908, 1277, 1547, 1580, 1635
BmtI GCTAGC 1 cut(s) 1571
BmuI ACTGGG 1 cut(s) 1738
BoxI GACNNNNGTC 2 cut(s) 1014, 1638
BpiI GAAGAC 1 cut(s) 168
BpmI CTGGAG 2 cut(s) 461, 893
BpuEI CTTGAG 1 cut(s) 644
BpuMI CCSGG 1 cut(s) 1757
BsaAI YACGTR 1 cut(s) 965
BsaHI GRCGYC 1 cut(s) 5
BsaJI CCNNGG 1 cut(s) 262
Bsc4I CCNNNNNNNGG 4 cut(s) 53, 244, 1142, 1673
Bse1I ACTGG 6 cut(s) 99, 152, 538, 682, 1688, 1733
Bse21I CCTNAGG 1 cut(s) 167
Bse3DI GCAATG 1 cut(s) 1476
BseBI CCWGG 2 cut(s) 1160, 1668
BseDI CCNNGG 1 cut(s) 262
BseLI CCNNNNNNNGG 4 cut(s) 53, 244, 1142, 1673
BseMI GCAATG 1 cut(s) 1476
BseMII CTCAG 3 cut(s) 111, 158, 1359
BseNI ACTGG 6 cut(s) 99, 152, 538, 682, 1688, 1733
BseRI GAGGAG 2 cut(s) 39, 1155
BseSI GKGCMC 1 cut(s) 414
BseXI GCAGC 6 cut(s) 150, 567, 595, 1319, 1434, 1632
BseYI CCCAGC 1 cut(s) 851
BsgI GTGCAG 1 cut(s) 157
BshFI GGCC 6 cut(s) 57, 98, 718, 930, 1320, 1687
BsiHKAI GWGCWC 3 cut(s) 414, 658, 1189
BsiSI CCGG 1 cut(s) 1756
BslFI GGGAC 1 cut(s) 678
BslI CCNNNNNNNGG 4 cut(s) 53, 244, 1142, 1673
BsmAI GTCTC 3 cut(s) 441, 1127, 1719
BsmFI GGGAC 1 cut(s) 678
BsnI GGCC 6 cut(s) 57, 98, 718, 930, 1320, 1687
Bsp1286I GDGCHC 3 cut(s) 414, 658, 1189
Bsp143I GATC 3 cut(s) 1306, 1411, 1594
BspACI CCGC 6 cut(s) 788, 1086, 1433, 1643, 1748, 1753
BspANI GGCC 6 cut(s) 57, 98, 718, 930, 1320, 1687
BspCNI CTCAG 3 cut(s) 112, 159, 1358
BspMAI CTGCAG 2 cut(s) 585, 1181
BspOI GCTAGC 1 cut(s) 1571
BspPI GGATC 2 cut(s) 1406, 1602
BspQI GCTCTTC 2 cut(s) 243, 1095
BsrBI CCGCTC 1 cut(s) 1088
BsrDI GCAATG 1 cut(s) 1476
BsrI ACTGG 6 cut(s) 99, 152, 538, 682, 1688, 1733
BssECI CCNNGG 1 cut(s) 262
BssMI GATC 3 cut(s) 1306, 1411, 1594
BssNI GRCGYC 1 cut(s) 5
BssT1I CCWWGG 1 cut(s) 262
Bst2UI CCWGG 2 cut(s) 1160, 1668
Bst4CI ACNGT 4 cut(s) 35, 971, 1256, 1406
Bst6I CTCTTC 6 cut(s) 243, 333, 537, 1095, 1236, 1275
BstACI GRCGYC 1 cut(s) 5
BstBAI YACGTR 1 cut(s) 965
BstC8I GCNNGC 5 cut(s) 143, 255, 1165, 1483, 1569
BstDEI CTNAG 4 cut(s) 120, 167, 650, 1345
BstH2I RGCGCY 2 cut(s) 455, 1504
BstHHI GCGC 2 cut(s) 454, 1503
BstKTI GATC 3 cut(s) 1309, 1414, 1597
BstMAI GTCTC 3 cut(s) 441, 1127, 1719
BstMBI GATC 3 cut(s) 1306, 1411, 1594
BstMWI GCNNNNNNNGC 1 cut(s) 927
BstNI CCWGG 2 cut(s) 1160, 1668
BstNSI RCATGY 5 cut(s) 336, 619, 1017, 1099, 1167
BstPAI GACNNNNGTC 2 cut(s) 1014, 1638
BstSCI CCNGG 3 cut(s) 1158, 1666, 1755
BstSFI CTRYAG 3 cut(s) 581, 1177, 1402
BstSLI GKGCMC 1 cut(s) 414
BstV1I GCAGC 6 cut(s) 150, 567, 595, 1319, 1434, 1632
BstV2I GAAGAC 1 cut(s) 168
BstX2I RGATCY 1 cut(s) 1411
BstXI CCANNNNNNTGG 2 cut(s) 301, 1213
BstYI RGATCY 1 cut(s) 1411
Bsu36I CCTNAGG 1 cut(s) 167
BsuRI GGCC 6 cut(s) 57, 98, 718, 930, 1320, 1687
BtsIMutI CAGTG 4 cut(s) 159, 321, 1411, 1681
Cac8I GCNNGC 5 cut(s) 143, 255, 1165, 1483, 1569
CfoI GCGC 2 cut(s) 454, 1503
Cfr13I GGNCC 2 cut(s) 1686, 1750
CpoI CGGWCCG 1 cut(s) 1750
CseI GACGC 1 cut(s) 575
CsiI ACCWGGT 1 cut(s) 1666
Csp6I GTAC 1 cut(s) 785
CspCI CAANNNNNGTGG 2 cut(s) 506, 541
CspI CGGWCCG 1 cut(s) 1750
CviAII CATG 9 cut(s) 240, 244, 301, 333, 616, 1014, 1096, 1164, 1213
CviQI GTAC 1 cut(s) 785
DdeI CTNAG 4 cut(s) 120, 167, 650, 1345
DpnI GATC 3 cut(s) 1308, 1413, 1596
DpnII GATC 3 cut(s) 1306, 1411, 1594
EaeI YGGCCR 4 cut(s) 55, 96, 716, 1318
Eam1104I CTCTTC 6 cut(s) 243, 333, 537, 1095, 1236, 1275
EarI CTCTTC 6 cut(s) 243, 333, 537, 1095, 1236, 1275
EciI GGCGGA 1 cut(s) 1422
Eco130I CCWWGG 1 cut(s) 262
Eco47I GGWCC 1 cut(s) 1750
Eco57I CTGAAG 3 cut(s) 65, 1217, 1517
Eco81I CCTNAGG 1 cut(s) 167
EcoRII CCWGG 2 cut(s) 1158, 1666
EcoT14I CCWWGG 1 cut(s) 262
EcoT22I ATGCAT 1 cut(s) 245
ErhI CCWWGG 1 cut(s) 262
FaeI CATG 9 cut(s) 243, 247, 304, 336, 619, 1017, 1099, 1167, 1216
FaqI GGGAC 1 cut(s) 678
FatI CATG 9 cut(s) 239, 243, 300, 332, 615, 1013, 1095, 1163, 1212
Fnu4HI GCNGC 6 cut(s) 139, 581, 584, 1333, 1448, 1646
Fsp4HI GCNGC 6 cut(s) 139, 581, 584, 1333, 1448, 1646
FspBI CTAG 5 cut(s) 711, 860, 956, 1277, 1568
GlaI GCGC 2 cut(s) 453, 1502
GluI GCNGC 6 cut(s) 139, 581, 584, 1333, 1448, 1646
GsaI CCCAGC 1 cut(s) 855
GsuI CTGGAG 2 cut(s) 461, 893
HaeII RGCGCY 2 cut(s) 455, 1504
HaeIII GGCC 6 cut(s) 57, 98, 718, 930, 1320, 1687
HapII CCGG 1 cut(s) 1756
HgaI GACGC 1 cut(s) 575
HhaI GCGC 2 cut(s) 454, 1503
Hin1I GRCGYC 1 cut(s) 5
Hin1II CATG 9 cut(s) 243, 247, 304, 336, 619, 1017, 1099, 1167, 1216
Hin6I GCGC 2 cut(s) 452, 1501
HinP1I GCGC 2 cut(s) 452, 1501
HincII GTYRAC 1 cut(s) 549
HindII GTYRAC 1 cut(s) 549
HindIII AAGCTT 1 cut(s) 512
HinfI GANTC 8 cut(s) 39, 305, 434, 477, 623, 983, 1374, 1538
HpaII CCGG 1 cut(s) 1756
HphI GGTGA 4 cut(s) 1352, 1369, 1465, 1519
Hpy166II GTNNAC 3 cut(s) 412, 549, 974
Hpy188I TCNGA 9 cut(s) 72, 84, 469, 476, 500, 622, 1236, 1348, 1497
Hpy8I GTNNAC 3 cut(s) 412, 549, 974
Hpy99I CGWCG 1 cut(s) 591
HpyAV CCTTC 4 cut(s) 187, 838, 1141, 1617
HpyCH4III ACNGT 4 cut(s) 35, 971, 1256, 1406
HpyCH4IV ACGT 4 cut(s) 5, 553, 964, 1713
HpyF10VI GCNNNNNNNGC 1 cut(s) 927
HpyF3I CTNAG 4 cut(s) 120, 167, 650, 1345
HpySE526I ACGT 4 cut(s) 5, 553, 964, 1713
Hsp92I GRCGYC 1 cut(s) 5
Hsp92II CATG 9 cut(s) 243, 247, 304, 336, 619, 1017, 1099, 1167, 1216
HspAI GCGC 2 cut(s) 452, 1501
Kzo9I GATC 3 cut(s) 1306, 1411, 1594
LguI GCTCTTC 2 cut(s) 243, 1095
LmnI GCTCC 2 cut(s) 856, 1455
Lsp1109I GCAGC 6 cut(s) 150, 567, 595, 1319, 1434, 1632
LweI GCATC 7 cut(s) 671, 838, 908, 1277, 1547, 1580, 1635
MabI ACCWGGT 1 cut(s) 1666
MaeI CTAG 5 cut(s) 711, 860, 956, 1277, 1568
MaeII ACGT 4 cut(s) 5, 553, 964, 1713
MaeIII GTNAC 2 cut(s) 965, 1631
MalI GATC 3 cut(s) 1308, 1413, 1596
MbiI CCGCTC 1 cut(s) 1088
MboI GATC 3 cut(s) 1306, 1411, 1594
MfeI CAATTG 3 cut(s) 354, 977, 1190
MflI RGATCY 1 cut(s) 1411
MhlI GDGCHC 3 cut(s) 414, 658, 1189
MlsI TGGCCA 4 cut(s) 57, 98, 718, 1320
MluNI TGGCCA 4 cut(s) 57, 98, 718, 1320
MlyI GAGTC 5 cut(s) 443, 471, 617, 992, 1368
MmeI TCCRAC 2 cut(s) 138, 1179
Mox20I TGGCCA 4 cut(s) 57, 98, 718, 1320
Mph1103I ATGCAT 1 cut(s) 245
MroXI GAANNNNTTC 1 cut(s) 225
MscI TGGCCA 4 cut(s) 57, 98, 718, 1320
MseI TTAA 4 cut(s) 105, 426, 1118, 1467
MslI CAYNNNNRTG 3 cut(s) 375, 417, 556
Msp20I TGGCCA 4 cut(s) 57, 98, 718, 1320
MspA1I CMGCKG 1 cut(s) 1645
MspI CCGG 1 cut(s) 1756
MspR9I CCNGG 3 cut(s) 1160, 1668, 1757
MunI CAATTG 3 cut(s) 354, 977, 1190
MvaI CCWGG 2 cut(s) 1160, 1668
MwoI GCNNNNNNNGC 1 cut(s) 927
NciI CCSGG 1 cut(s) 1757
NdeII GATC 3 cut(s) 1306, 1411, 1594
NheI GCTAGC 1 cut(s) 1567
NlaIII CATG 9 cut(s) 243, 247, 304, 336, 619, 1017, 1099, 1167, 1216
NmuCI GTSAC 2 cut(s) 965, 1631
NsiI ATGCAT 1 cut(s) 245
NspI RCATGY 5 cut(s) 336, 619, 1017, 1099, 1167
OliI CACNNNNGTG 1 cut(s) 417
PaeI GCATGC 1 cut(s) 1167
PciI ACATGT 2 cut(s) 615, 1013
PciSI GCTCTTC 2 cut(s) 243, 1095
PdmI GAANNNNTTC 1 cut(s) 225
PfeI GAWTC 3 cut(s) 39, 305, 1538
PkrI GCNGC 6 cut(s) 140, 582, 585, 1334, 1449, 1647
PleI GAGTC 5 cut(s) 442, 471, 617, 991, 1368
PpsI GAGTC 5 cut(s) 442, 471, 617, 991, 1368
Ppu21I YACGTR 1 cut(s) 965
PscI ACATGT 2 cut(s) 615, 1013
PshAI GACNNNNGTC 2 cut(s) 1014, 1638
Psp6I CCWGG 2 cut(s) 1158, 1666
PspFI CCCAGC 1 cut(s) 851
PspGI CCWGG 2 cut(s) 1158, 1666
PspPI GGNCC 2 cut(s) 1686, 1750
PstI CTGCAG 2 cut(s) 585, 1181
PsuI RGATCY 1 cut(s) 1411
RsaI GTAC 1 cut(s) 786
RsaNI GTAC 1 cut(s) 785
RseI CAYNNNNRTG 3 cut(s) 375, 417, 556
Rsr2I CGGWCCG 1 cut(s) 1750
RsrII CGGWCCG 1 cut(s) 1750
SapI GCTCTTC 2 cut(s) 243, 1095
SaqAI TTAA 4 cut(s) 105, 426, 1118, 1467
SatI GCNGC 6 cut(s) 139, 581, 584, 1333, 1448, 1646
Sau3AI GATC 3 cut(s) 1306, 1411, 1594
Sau96I GGNCC 2 cut(s) 1686, 1750
SchI GAGTC 5 cut(s) 443, 471, 617, 992, 1368
ScrFI CCNGG 3 cut(s) 1160, 1668, 1757
SduI GDGCHC 3 cut(s) 414, 658, 1189
SexAI ACCWGGT 1 cut(s) 1666
SfaNI GCATC 7 cut(s) 671, 838, 908, 1277, 1547, 1580, 1635
SfcI CTRYAG 3 cut(s) 581, 1177, 1402
SinI GGWCC 1 cut(s) 1750
SmiMI CAYNNNNRTG 3 cut(s) 375, 417, 556
SmlI CTYRAG 1 cut(s) 659
SmoI CTYRAG 1 cut(s) 659
SphI GCATGC 1 cut(s) 1167
SsiI CCGC 6 cut(s) 788, 1086, 1433, 1643, 1748, 1753
SspI AATATT 2 cut(s) 463, 601
SspMI CTAG 5 cut(s) 711, 860, 956, 1277, 1568
StyD4I CCNGG 3 cut(s) 1158, 1666, 1755
StyI CCWWGG 1 cut(s) 262
TaaI ACNGT 4 cut(s) 35, 971, 1256, 1406
TaiI ACGT 4 cut(s) 8, 556, 967, 1716
TaqI TCGA 5 cut(s) 37, 174, 229, 480, 589
TfiI GAWTC 3 cut(s) 39, 305, 1538
Tru1I TTAA 4 cut(s) 105, 426, 1118, 1467
Tru9I TTAA 4 cut(s) 105, 426, 1118, 1467
TscAI CASTG 4 cut(s) 159, 321, 1411, 1688
TseFI GTSAC 2 cut(s) 965, 1631
TseI GCWGC 6 cut(s) 138, 580, 583, 1332, 1447, 1645
Tsp45I GTSAC 2 cut(s) 965, 1631
TspDTI ATGAA 4 cut(s) 234, 297, 376, 484
TspGWI ACGGA 1 cut(s) 1619
TspRI CASTG 4 cut(s) 159, 321, 1411, 1688
VneI GTGCAC 1 cut(s) 410
VpaK11BI GGWCC 1 cut(s) 1750
XapI RAATTY 5 cut(s) 225, 520, 591, 731, 826
XbaI TCTAGA 2 cut(s) 955, 1276
XceI RCATGY 5 cut(s) 336, 619, 1017, 1099, 1167
XcmI CCANNNNNNNNNTGG 1 cut(s) 711
XmnI GAANNNNTTC 1 cut(s) 225
XspI CTAG 5 cut(s) 711, 860, 956, 1277, 1568
ZraI GACGTC 1 cut(s) 6
Zsp2I ATGCAT 1 cut(s) 245
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.