disease resistance
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Rx_N | PF18052 | 10 - 100 | 1.5e-18 | Rx N-terminal domain |
| NB-ARC | PF00931 | 190 - 351 | 3e-36 | NB-ARC domain |
| WHD_DRP | PF23559 | 431 - 499 | 8.5e-23 | Disease resistance protein Winged helix domain |
| LRR_14 | PF23598 | 572 - 839 | 9.5e-20 | Leucine-rich repeat region |
| LRR_R13L1-DRL21 | PF25019 | 689 - 807 | 2.7e-30 | R13L1/DRL21 LRRs |
| LRR_14 | PF23598 | 1067 - 1268 | 4.2e-06 | Leucine-rich repeat region |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 2694 |
| AccI | GTMKAC | 1 cut(s) | 1024 |
| AccII | CGCG | 1 cut(s) | 3363 |
| AclWI | GGATC | 6 cut(s) | 64, 204, 557, 3659, 3659, 3855 |
| AcoI | YGGCCR | 4 cut(s) | 758, 2383, 2424, 3044 |
| AcsI | RAATTY | 7 cut(s) | 1066, 1310, 2291, 2553, 2848, 3059, 3154 |
| AcuI | CTGAAG | 6 cut(s) | 20, 447, 1005, 1647, 3470, 3770 |
| AcvI | CACGTG | 1 cut(s) | 938 |
| AcyI | GRCGYC | 1 cut(s) | 3074 |
| AfaI | GTAC | 5 cut(s) | 318, 1230, 1730, 1808, 3114 |
| AfiI | CCNNNNNNNGG | 7 cut(s) | 509, 900, 2381, 2578, 3337, 3395, 3926 |
| AflII | CTTAAG | 1 cut(s) | 1079 |
| AflIII | ACRYGT | 4 cut(s) | 857, 935, 2698, 2879 |
| AjnI | CCWGG | 3 cut(s) | 478, 760, 3919 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 1317, 1349, 2379, 2411 |
| AleI | CACNNNNGTG | 1 cut(s) | 191 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 466, 498 |
| Alw21I | GWGCWC | 5 cut(s) | 857, 1743, 2229, 2742, 2986 |
| Alw26I | GTCTC | 7 cut(s) | 1428, 1506, 1610, 1789, 3380, 3496, 3972 |
| Alw44I | GTGCAC | 1 cut(s) | 2738 |
| AlwI | GGATC | 6 cut(s) | 64, 204, 557, 3659, 3659, 3855 |
| AlwNI | CAGNNNCTG | 4 cut(s) | 43, 701, 983, 1781 |
| Ama87I | CYCGRG | 2 cut(s) | 63, 1444 |
| AoxI | GGCC | 8 cut(s) | 758, 1058, 2148, 2383, 2424, 3044, 3190, 3938 |
| ApaLI | GTGCAC | 1 cut(s) | 2738 |
| ApoI | RAATTY | 7 cut(s) | 1066, 1310, 2291, 2553, 2848, 3059, 3154 |
| ArsI | GACNNNNNNTTYG | 6 cut(s) | 466, 498, 1391, 1423, 2483, 2515 |
| AseI | ATTAAT | 2 cut(s) | 1328, 1829 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 2553 |
| AspLEI | GCGC | 2 cut(s) | 2782, 3756 |
| AspS9I | GGNCC | 4 cut(s) | 500, 2094, 2148, 3939 |
| AsuII | TTCGAA | 1 cut(s) | 2289 |
| AsuNHI | GCTAGC | 2 cut(s) | 3038, 3820 |
| AvaI | CYCGRG | 2 cut(s) | 63, 1444 |
| AvaII | GGWCC | 2 cut(s) | 500, 2094 |
| AxyI | CCTNAGG | 1 cut(s) | 2495 |
| BaeGI | GKGCMC | 1 cut(s) | 2742 |
| BalI | TGGCCA | 3 cut(s) | 2385, 2426, 3046 |
| BanII | GRGCYC | 1 cut(s) | 970 |
| BauI | CACGAG | 2 cut(s) | 3257, 3725 |
| BbrPI | CACGTG | 1 cut(s) | 938 |
| BbsI | GAAGAC | 4 cut(s) | 528, 637, 1913, 2496 |
| Bbv12I | GWGCWC | 5 cut(s) | 857, 1743, 2229, 2742, 2986 |
| BbvCI | CCTCAGC | 1 cut(s) | 3476 |
| BceAI | ACGGC | 2 cut(s) | 204, 3212 |
| BciT130I | CCWGG | 3 cut(s) | 480, 762, 3921 |
| BciVI | GTATCC | 1 cut(s) | 2406 |
| BclI | TGATCA | 1 cut(s) | 3439 |
| BcoDI | GTCTC | 7 cut(s) | 1428, 1506, 1610, 1789, 3380, 3496, 3972 |
| BfaI | CTAG | 4 cut(s) | 2258, 2592, 3039, 3821 |
| BfmI | CTRYAG | 4 cut(s) | 1782, 1802, 2230, 2909 |
| BfoI | RGCGCY | 2 cut(s) | 2783, 3757 |
| BfrI | CTTAAG | 1 cut(s) | 1079 |
| BfuI | GTATCC | 1 cut(s) | 2406 |
| BglII | AGATCT | 3 cut(s) | 15, 3277, 3670 |
| BmcAI | AGTACT | 2 cut(s) | 1230, 1730 |
| Bme1390I | CCNGG | 3 cut(s) | 480, 762, 3921 |
| Bme18I | GGWCC | 2 cut(s) | 500, 2094 |
| BmeT110I | CYCGRG | 2 cut(s) | 63, 1444 |
| BmgT120I | GGNCC | 4 cut(s) | 500, 2094, 2148, 3939 |
| BmiI | GGNNCC | 4 cut(s) | 669, 967, 2095, 3740 |
| BmrFI | CCNGG | 3 cut(s) | 480, 762, 3921 |
| BmrI | ACTGGG | 2 cut(s) | 1220, 3991 |
| BmtI | GCTAGC | 2 cut(s) | 3042, 3824 |
| BmuI | ACTGGG | 2 cut(s) | 1220, 3991 |
| BoxI | GACNNNNGTC | 1 cut(s) | 3267 |
| BpiI | GAAGAC | 4 cut(s) | 528, 637, 1913, 2496 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 440, 472 |
| BpmI | CTGGAG | 4 cut(s) | 98, 871, 1530, 2789 |
| Bpu10I | CCTNAGC | 2 cut(s) | 909, 3476 |
| Bpu14I | TTCGAA | 1 cut(s) | 2289 |
| BpuEI | CTTGAG | 4 cut(s) | 272, 665, 1379, 2972 |
| Bsa29I | ATCGAT | 1 cut(s) | 2127 |
| BsaAI | YACGTR | 1 cut(s) | 938 |
| BsaBI | GATNNNNATC | 3 cut(s) | 561, 3438, 3669 |
| BsaHI | GRCGYC | 1 cut(s) | 3074 |
| BsaJI | CCNNGG | 3 cut(s) | 62, 73, 2104 |
| BsaWI | WCCGGW | 1 cut(s) | 417 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 844, 874, 1406, 1436 |
| Bsc4I | CCNNNNNNNGG | 7 cut(s) | 509, 900, 2381, 2578, 3337, 3395, 3926 |
| Bse21I | CCTNAGG | 1 cut(s) | 2495 |
| Bse3DI | GCAATG | 5 cut(s) | 669, 1057, 1111, 1389, 2078 |
| Bse8I | GATNNNNATC | 3 cut(s) | 561, 3438, 3669 |
| BseBI | CCWGG | 3 cut(s) | 480, 762, 3921 |
| BseCI | ATCGAT | 1 cut(s) | 2127 |
| BseDI | CCNNGG | 3 cut(s) | 62, 73, 2104 |
| BseJI | GATNNNNATC | 3 cut(s) | 561, 3438, 3669 |
| BseLI | CCNNNNNNNGG | 7 cut(s) | 509, 900, 2381, 2578, 3337, 3395, 3926 |
| BseMI | GCAATG | 5 cut(s) | 669, 1057, 1111, 1389, 2078 |
| BseMII | CTCAG | 7 cut(s) | 262, 1223, 1836, 2439, 2486, 3490, 3612 |
| BseRI | GAGGAG | 4 cut(s) | 111, 182, 2367, 3408 |
| BseSI | GKGCMC | 1 cut(s) | 2742 |
| BseYI | CCCAGC | 2 cut(s) | 970, 976 |
| BsgI | GTGCAG | 1 cut(s) | 2485 |
| Bsh1236I | CGCG | 1 cut(s) | 3363 |
| Bsh1285I | CGRYCG | 1 cut(s) | 4006 |
| BshFI | GGCC | 8 cut(s) | 760, 1060, 2150, 2385, 2426, 3046, 3192, 3940 |
| BshVI | ATCGAT | 1 cut(s) | 2127 |
| BsiEI | CGRYCG | 1 cut(s) | 4006 |
| BsiHKAI | GWGCWC | 5 cut(s) | 857, 1743, 2229, 2742, 2986 |
| BsiHKCI | CYCGRG | 2 cut(s) | 63, 1444 |
| BsiSI | CCGG | 1 cut(s) | 418 |
| BslFI | GGGAC | 3 cut(s) | 651, 1387, 2107 |
| BslI | CCNNNNNNNGG | 7 cut(s) | 509, 900, 2381, 2578, 3337, 3395, 3926 |
| BsmAI | GTCTC | 7 cut(s) | 1428, 1506, 1610, 1789, 3380, 3496, 3972 |
| BsmFI | GGGAC | 3 cut(s) | 651, 1387, 2107 |
| BsmI | GAATGC | 1 cut(s) | 29 |
| BsnI | GGCC | 8 cut(s) | 760, 1060, 2150, 2385, 2426, 3046, 3192, 3940 |
| BsoBI | CYCGRG | 2 cut(s) | 63, 1444 |
| Bsp119I | TTCGAA | 1 cut(s) | 2289 |
| Bsp1286I | GDGCHC | 6 cut(s) | 857, 970, 1743, 2229, 2742, 2986 |
| BspANI | GGCC | 8 cut(s) | 760, 1060, 2150, 2385, 2426, 3046, 3192, 3940 |
| BspCNI | CTCAG | 7 cut(s) | 261, 1224, 1837, 2440, 2487, 3489, 3611 |
| BspDI | ATCGAT | 1 cut(s) | 2127 |
| BspFNI | CGCG | 1 cut(s) | 3363 |
| BspLI | GGNNCC | 4 cut(s) | 669, 967, 2095, 3740 |
| BspMAI | CTGCAG | 2 cut(s) | 2234, 2913 |
| BspOI | GCTAGC | 2 cut(s) | 3042, 3824 |
| BspPI | GGATC | 6 cut(s) | 64, 204, 557, 3659, 3659, 3855 |
| BspQI | GCTCTTC | 1 cut(s) | 3348 |
| BspT104I | TTCGAA | 1 cut(s) | 2289 |
| BspTI | CTTAAG | 1 cut(s) | 1079 |
| BsrDI | GCAATG | 5 cut(s) | 669, 1057, 1111, 1389, 2078 |
| BssECI | CCNNGG | 3 cut(s) | 62, 73, 2104 |
| BssNI | GRCGYC | 1 cut(s) | 3074 |
| BssSI | CACGAG | 2 cut(s) | 3257, 3725 |
| BssT1I | CCWWGG | 2 cut(s) | 73, 2104 |
| Bst2BI | CACGAG | 2 cut(s) | 3257, 3725 |
| Bst2UI | CCWGG | 3 cut(s) | 480, 762, 3921 |
| Bst4CI | ACNGT | 8 cut(s) | 135, 672, 724, 1457, 1806, 2023, 3224, 3509 |
| Bst6I | CTCTTC | 6 cut(s) | 2138, 2661, 2865, 3348, 3489, 3528 |
| BstACI | GRCGYC | 1 cut(s) | 3074 |
| BstAFI | CTTAAG | 1 cut(s) | 1079 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 2023, 3585 |
| BstBAI | YACGTR | 1 cut(s) | 938 |
| BstBI | TTCGAA | 1 cut(s) | 2289 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 2576 |
| BstFNI | CGCG | 1 cut(s) | 3363 |
| BstH2I | RGCGCY | 2 cut(s) | 2783, 3757 |
| BstHHI | GCGC | 2 cut(s) | 2782, 3756 |
| BstMAI | GTCTC | 7 cut(s) | 1428, 1506, 1610, 1789, 3380, 3496, 3972 |
| BstMCI | CGRYCG | 1 cut(s) | 4006 |
| BstMWI | GCNNNNNNNGC | 7 cut(s) | 146, 289, 980, 1502, 2023, 2147, 3585 |
| BstNI | CCWGG | 3 cut(s) | 480, 762, 3921 |
| BstNSI | RCATGY | 7 cut(s) | 861, 1046, 1857, 1861, 2339, 2702, 2883 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 3267 |
| BstSCI | CCNGG | 3 cut(s) | 478, 760, 3919 |
| BstSFI | CTRYAG | 4 cut(s) | 1782, 1802, 2230, 2909 |
| BstSLI | GKGCMC | 1 cut(s) | 2742 |
| BstUI | CGCG | 1 cut(s) | 3363 |
| BstV2I | GAAGAC | 4 cut(s) | 528, 637, 1913, 2496 |
| BstX2I | RGATCY | 6 cut(s) | 15, 69, 196, 3277, 3664, 3670 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 2629, 3466 |
| BstYI | RGATCY | 6 cut(s) | 15, 69, 196, 3277, 3664, 3670 |
| Bsu15I | ATCGAT | 1 cut(s) | 2127 |
| Bsu36I | CCTNAGG | 1 cut(s) | 2495 |
| BsuI | GTATCC | 1 cut(s) | 2406 |
| BsuRI | GGCC | 8 cut(s) | 760, 1060, 2150, 2385, 2426, 3046, 3192, 3940 |
| BsuTUI | ATCGAT | 1 cut(s) | 2127 |
| BtgZI | GCGATG | 1 cut(s) | 824 |
| BtsI | GCAGTG | 3 cut(s) | 12, 198, 702 |
| BtsIMutI | CAGTG | 9 cut(s) | 12, 131, 198, 702, 1675, 2487, 2765, 3505, 3934 |
| CaiI | CAGNNNCTG | 4 cut(s) | 43, 701, 983, 1781 |
| CfoI | GCGC | 2 cut(s) | 2782, 3756 |
| Cfr13I | GGNCC | 4 cut(s) | 500, 2094, 2148, 3939 |
| ClaI | ATCGAT | 1 cut(s) | 2127 |
| CseI | GACGC | 5 cut(s) | 330, 533, 2341, 2903, 3063 |
| CsiI | ACCWGGT | 2 cut(s) | 478, 3919 |
| Csp6I | GTAC | 5 cut(s) | 317, 1229, 1729, 1807, 3113 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 2834, 2869 |
| CviQI | GTAC | 5 cut(s) | 317, 1229, 1729, 1807, 3113 |
| DraI | TTTAAA | 2 cut(s) | 999, 1266 |
| EaeI | YGGCCR | 4 cut(s) | 758, 2383, 2424, 3044 |
| Eam1104I | CTCTTC | 6 cut(s) | 2138, 2661, 2865, 3348, 3489, 3528 |
| EarI | CTCTTC | 6 cut(s) | 2138, 2661, 2865, 3348, 3489, 3528 |
| Eco130I | CCWWGG | 2 cut(s) | 73, 2104 |
| Eco24I | GRGCYC | 1 cut(s) | 970 |
| Eco32I | GATATC | 2 cut(s) | 235, 1393 |
| Eco47I | GGWCC | 2 cut(s) | 500, 2094 |
| Eco57I | CTGAAG | 6 cut(s) | 20, 447, 1005, 1647, 3470, 3770 |
| Eco72I | CACGTG | 1 cut(s) | 938 |
| Eco81I | CCTNAGG | 1 cut(s) | 2495 |
| Eco88I | CYCGRG | 2 cut(s) | 63, 1444 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 2576 |
| EcoRI | GAATTC | 1 cut(s) | 1310 |
| EcoRII | CCWGG | 3 cut(s) | 478, 760, 3919 |
| EcoRV | GATATC | 2 cut(s) | 235, 1393 |
| EcoT14I | CCWWGG | 2 cut(s) | 73, 2104 |
| EcoT22I | ATGCAT | 2 cut(s) | 1476, 1859 |
| EcoT38I | GRGCYC | 1 cut(s) | 970 |
| ErhI | CCWWGG | 2 cut(s) | 73, 2104 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 396, 428, 1259, 1291 |
| FaqI | GGGAC | 3 cut(s) | 651, 1387, 2107 |
| FauI | CCCGC | 2 cut(s) | 628, 1728 |
| FauNDI | CATATG | 1 cut(s) | 3426 |
| FbaI | TGATCA | 1 cut(s) | 3439 |
| FblI | GTMKAC | 1 cut(s) | 1024 |
| FriOI | GRGCYC | 1 cut(s) | 970 |
| FspBI | CTAG | 4 cut(s) | 2258, 2592, 3039, 3821 |
| GlaI | GCGC | 2 cut(s) | 2781, 3755 |
| GsaI | CCCAGC | 2 cut(s) | 974, 980 |
| GsuI | CTGGAG | 4 cut(s) | 98, 871, 1530, 2789 |
| HaeII | RGCGCY | 2 cut(s) | 2783, 3757 |
| HaeIII | GGCC | 8 cut(s) | 760, 1060, 2150, 2385, 2426, 3046, 3192, 3940 |
| HapII | CCGG | 1 cut(s) | 418 |
| HgaI | GACGC | 5 cut(s) | 330, 533, 2341, 2903, 3063 |
| HhaI | GCGC | 2 cut(s) | 2782, 3756 |
| Hin1I | GRCGYC | 1 cut(s) | 3074 |
| Hin6I | GCGC | 2 cut(s) | 2780, 3754 |
| HinP1I | GCGC | 2 cut(s) | 2780, 3754 |
| HincII | GTYRAC | 5 cut(s) | 57, 785, 1851, 2007, 2877 |
| HindII | GTYRAC | 5 cut(s) | 57, 785, 1851, 2007, 2877 |
| HindIII | AAGCTT | 4 cut(s) | 88, 290, 2252, 2840 |
| HpaI | GTTAAC | 1 cut(s) | 57 |
| HpaII | CCGG | 1 cut(s) | 418 |
| Hpy166II | GTNNAC | 8 cut(s) | 57, 785, 1025, 1851, 2007, 2740, 2877, 3227 |
| Hpy8I | GTNNAC | 8 cut(s) | 57, 785, 1025, 1851, 2007, 2740, 2877, 3227 |
| Hpy99I | CGWCG | 6 cut(s) | 242, 324, 903, 2919, 3079, 3198 |
| HpyCH4III | ACNGT | 8 cut(s) | 135, 672, 724, 1457, 1806, 2023, 3224, 3509 |
| HpyCH4IV | ACGT | 5 cut(s) | 937, 1147, 1877, 1945, 3966 |
| HpyF10VI | GCNNNNNNNGC | 7 cut(s) | 146, 289, 980, 1502, 2023, 2147, 3585 |
| HpySE526I | ACGT | 5 cut(s) | 937, 1147, 1877, 1945, 3966 |
| Hsp92I | GRCGYC | 1 cut(s) | 3074 |
| HspAI | GCGC | 2 cut(s) | 2780, 3754 |
| Ksp22I | TGATCA | 1 cut(s) | 3439 |
| KspAI | GTTAAC | 1 cut(s) | 57 |
| LguI | GCTCTTC | 1 cut(s) | 3348 |
| LmnI | GCTCC | 7 cut(s) | 117, 852, 895, 905, 965, 1414, 3708 |
| MabI | ACCWGGT | 2 cut(s) | 478, 3919 |
| MaeI | CTAG | 4 cut(s) | 2258, 2592, 3039, 3821 |
| MaeII | ACGT | 5 cut(s) | 937, 1147, 1877, 1945, 3966 |
| MaeIII | GTNAC | 8 cut(s) | 724, 748, 928, 1093, 1151, 1397, 2763, 3218 |
| MfeI | CAATTG | 6 cut(s) | 141, 1721, 2186, 2682, 3443, 3574 |
| MflI | RGATCY | 6 cut(s) | 15, 69, 196, 3277, 3664, 3670 |
| MhlI | GDGCHC | 6 cut(s) | 857, 970, 1743, 2229, 2742, 2986 |
| MlsI | TGGCCA | 3 cut(s) | 2385, 2426, 3046 |
| MluNI | TGGCCA | 3 cut(s) | 2385, 2426, 3046 |
| MmeI | TCCRAC | 5 cut(s) | 474, 2199, 2897, 3432, 3955 |
| Mox20I | TGGCCA | 3 cut(s) | 2385, 2426, 3046 |
| Mph1103I | ATGCAT | 2 cut(s) | 1476, 1859 |
| MroXI | GAANNNNTTC | 1 cut(s) | 2553 |
| MscI | TGGCCA | 3 cut(s) | 2385, 2426, 3046 |
| MslI | CAYNNNNRTG | 4 cut(s) | 191, 2088, 2703, 2884 |
| Msp20I | TGGCCA | 3 cut(s) | 2385, 2426, 3046 |
| MspA1I | CMGCKG | 5 cut(s) | 149, 178, 983, 3898, 4008 |
| MspCI | CTTAAG | 1 cut(s) | 1079 |
| MspI | CCGG | 1 cut(s) | 418 |
| MspR9I | CCNGG | 3 cut(s) | 480, 762, 3921 |
| MunI | CAATTG | 6 cut(s) | 141, 1721, 2186, 2682, 3443, 3574 |
| Mva1269I | GAATGC | 1 cut(s) | 29 |
| MvaI | CCWGG | 3 cut(s) | 480, 762, 3921 |
| MvnI | CGCG | 1 cut(s) | 3363 |
| MwoI | GCNNNNNNNGC | 7 cut(s) | 146, 289, 980, 1502, 2023, 2147, 3585 |
| NdeI | CATATG | 1 cut(s) | 3426 |
| NheI | GCTAGC | 2 cut(s) | 3038, 3820 |
| NlaIV | GGNNCC | 4 cut(s) | 669, 967, 2095, 3740 |
| NmeAIII | GCCGAG | 3 cut(s) | 597, 736, 3317 |
| NmuCI | GTSAC | 6 cut(s) | 724, 748, 928, 1397, 2763, 3218 |
| NsiI | ATGCAT | 2 cut(s) | 1476, 1859 |
| NspI | RCATGY | 7 cut(s) | 861, 1046, 1857, 1861, 2339, 2702, 2883 |
| NspV | TTCGAA | 1 cut(s) | 2289 |
| OliI | CACNNNNGTG | 1 cut(s) | 191 |
| PaeI | GCATGC | 1 cut(s) | 1861 |
| PciI | ACATGT | 3 cut(s) | 857, 2698, 2879 |
| PciSI | GCTCTTC | 1 cut(s) | 3348 |
| PctI | GAATGC | 1 cut(s) | 29 |
| PdmI | GAANNNNTTC | 1 cut(s) | 2553 |
| PfeI | GAWTC | 5 cut(s) | 869, 1778, 2367, 2633, 3791 |
| PmaCI | CACGTG | 1 cut(s) | 938 |
| PmlI | CACGTG | 1 cut(s) | 938 |
| Ppu21I | YACGTR | 1 cut(s) | 938 |
| PscI | ACATGT | 3 cut(s) | 857, 2698, 2879 |
| PshAI | GACNNNNGTC | 1 cut(s) | 3267 |
| PshBI | ATTAAT | 2 cut(s) | 1328, 1829 |
| PsiI | TTATAA | 1 cut(s) | 2694 |
| Psp6I | CCWGG | 3 cut(s) | 478, 760, 3919 |
| PspCI | CACGTG | 1 cut(s) | 938 |
| PspFI | CCCAGC | 2 cut(s) | 970, 976 |
| PspGI | CCWGG | 3 cut(s) | 478, 760, 3919 |
| PspN4I | GGNNCC | 4 cut(s) | 669, 967, 2095, 3740 |
| PspPI | GGNCC | 4 cut(s) | 500, 2094, 2148, 3939 |
| PstI | CTGCAG | 2 cut(s) | 2234, 2913 |
| PstNI | CAGNNNCTG | 4 cut(s) | 43, 701, 983, 1781 |
| PsuI | RGATCY | 6 cut(s) | 15, 69, 196, 3277, 3664, 3670 |
| PvuII | CAGCTG | 1 cut(s) | 178 |
| RsaI | GTAC | 5 cut(s) | 318, 1230, 1730, 1808, 3114 |
| RsaNI | GTAC | 5 cut(s) | 317, 1229, 1729, 1807, 3113 |
| RseI | CAYNNNNRTG | 4 cut(s) | 191, 2088, 2703, 2884 |
| SapI | GCTCTTC | 1 cut(s) | 3348 |
| Sau96I | GGNCC | 4 cut(s) | 500, 2094, 2148, 3939 |
| ScaI | AGTACT | 2 cut(s) | 1230, 1730 |
| ScrFI | CCNGG | 3 cut(s) | 480, 762, 3921 |
| SduI | GDGCHC | 6 cut(s) | 857, 970, 1743, 2229, 2742, 2986 |
| SexAI | ACCWGGT | 2 cut(s) | 478, 3919 |
| SfcI | CTRYAG | 4 cut(s) | 1782, 1802, 2230, 2909 |
| SfuI | TTCGAA | 1 cut(s) | 2289 |
| SinI | GGWCC | 2 cut(s) | 500, 2094 |
| SmiMI | CAYNNNNRTG | 4 cut(s) | 191, 2088, 2703, 2884 |
| SmlI | CTYRAG | 5 cut(s) | 287, 680, 1079, 1358, 2987 |
| SmoI | CTYRAG | 5 cut(s) | 287, 680, 1079, 1358, 2987 |
| SphI | GCATGC | 1 cut(s) | 1861 |
| SspI | AATATT | 3 cut(s) | 1884, 2791, 2929 |
| SspMI | CTAG | 4 cut(s) | 2258, 2592, 3039, 3821 |
| StyD4I | CCNGG | 3 cut(s) | 478, 760, 3919 |
| StyI | CCWWGG | 2 cut(s) | 73, 2104 |
| TaaI | ACNGT | 8 cut(s) | 135, 672, 724, 1457, 1806, 2023, 3224, 3509 |
| TaiI | ACGT | 5 cut(s) | 940, 1150, 1880, 1948, 3969 |
| TaqI | TCGA | 8 cut(s) | 237, 1596, 2127, 2289, 2365, 2502, 2557, 2808 |
| TaqII | GACCGA | 2 cut(s) | 1416, 1781 |
| TatI | WGTACW | 2 cut(s) | 1228, 1728 |
| TauI | GCSGC | 2 cut(s) | 29, 983 |
| TfiI | GAWTC | 5 cut(s) | 869, 1778, 2367, 2633, 3791 |
| TscAI | CASTG | 9 cut(s) | 12, 138, 198, 702, 1675, 2487, 2772, 3512, 3941 |
| TseFI | GTSAC | 6 cut(s) | 724, 748, 928, 1397, 2763, 3218 |
| Tsp45I | GTSAC | 6 cut(s) | 724, 748, 928, 1397, 2763, 3218 |
| TspGWI | ACGGA | 2 cut(s) | 1416, 3872 |
| TspRI | CASTG | 9 cut(s) | 12, 138, 198, 702, 1675, 2487, 2772, 3512, 3941 |
| Vha464I | CTTAAG | 1 cut(s) | 1079 |
| VneI | GTGCAC | 1 cut(s) | 2738 |
| VpaK11BI | GGWCC | 2 cut(s) | 500, 2094 |
| VspI | ATTAAT | 2 cut(s) | 1328, 1829 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 2576 |
| XapI | RAATTY | 7 cut(s) | 1066, 1310, 2291, 2553, 2848, 3059, 3154 |
| XbaI | TCTAGA | 2 cut(s) | 2257, 2591 |
| XceI | RCATGY | 7 cut(s) | 861, 1046, 1857, 1861, 2339, 2702, 2883 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 604, 3039 |
| XmiI | GTMKAC | 1 cut(s) | 1024 |
| XmnI | GAANNNNTTC | 1 cut(s) | 2553 |
| XspI | CTAG | 4 cut(s) | 2258, 2592, 3039, 3821 |
| ZrmI | AGTACT | 2 cut(s) | 1230, 1730 |
| Zsp2I | ATGCAT | 2 cut(s) | 1476, 1859 |