Rroxscaffold_1G00038820

disease resistance

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000001
Physical Location & Seq
Forward (+)
56316201 .. 56318933
2733 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_1G00038820.1

Sequence Viewer

Length: 1173 bp
ATGACGAGACCCATTGAGATCCACTGTTTGAAGTATATGTCAGATGATGATTGTTGGGAAGTCTTTCAGCAGCATGCATTCATGAATGTCAACAGTGGGAGACCACAAGGTTTTGAATTTTTTCGAGAGAGTATTGTTAGAAAATGTGGCGGATTGCCCTTGGCTGCAAGGACTCTCGGTGGTCTTTTAGGTTGTGAAGACATAGATGAGTGGAAAAAAATATTGAACAATAGATTATGGAGTCTATCAAATAAGAGTCACATTAACCAAGTGTTGAAATTGAGCTATCACTATCTTCCTTCATATTTGAAAAGGTGCTTTGCATATTGCTCAATACTCCCAAACGACTATGAATTTGGGGAGAAGCAATTGACACTTCTGTGGATGGCAGAGGGTTTACTTCAACAACAAGAAGAACATGAAACATTAGAAGACTTGGGTGGTCACTATTTTGGACAGCTATTATCTAGGTCATTATTTCAAAAATCAAGCAGAAACAGTTCATTATATGTTATGCATCACCTTGTTGGTGATCTGGCTCGGTGGGCTGCGGGAGAAATTTGTCTCAGGTTGGAGGATAAAGTGGATGGTAGATGTTCTCGAAAGACACGTCATTCGTCATACATTCCCAGTCAGTATGATGGGGTTAACAAATTTGAGGCATTCTCTGAAGCCAGACGTTTGCGTACTTTTCTACCATTGTCAGAAGACTTTTGTAACCATGTGACTTGTAAGGCTACTCTTGATTTACTGCCAAGATTGGAATACTTACGGGTACTCTCTTTGAATGGCTATCAAATAACTGAGTTGCCGAATTCAATTGGTAACTTGAAGCATCTACGGTACCTTGATGTTTCTCATACATTAATAATGAGATTGCCTGAATCAACAACCACCCTTTGCAACTTACAGACATTAATATTAGAAAGTTGTTCTAGACTGAAGACACTGCCTGCAAAGATGCGATATTTATCAAATCTACGCCATCTCAACAATTTAAATGTGCCTTCATTGGAAGGAATGCCCCCACAGCTAAGTCAACTGAGCAATCTGCAAACGTTGCCGAATTTCGTGGTGGGCAAAGGTAGTGACTCAAGGGTAAGAGAGATAGGGCCCCTGTCTCTTCTTCGATCGAGGAACATTGTGCCTCTCAAGATTGGAAAATGTCAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

390

Amino Acids

44.8

Weight (kDa)

8.8

Isoelectric Point (pI)

60.72

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
WHD_DRP PF23559 112 - 180 4e-20 Disease resistance protein Winged helix domain
LRR_14 PF23598 239 - 358 1.1e-18 Leucine-rich repeat region
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000070)

Species Orthologous Gene IDs
fragaria_vesca FvH4_7g00360 FvH4_7g00850 FvH4_7g02400 FvH4_7g02430 FvH4_7g02450 FvH4_7g25671 FvH4_7g25680 FvH4_7g25683 FvH4_7g26980 FvH4_7g27330 FvH4_7g27355 FvH4_7g27610 FvH4_7g27642 FvH4_7g27890 FvH4_7g27891 FvH4_7g27891 FvH4_7g27891 FvH4_7g28110 FvH4_7g28390
malus_domestica MD00G1070800.v1.1 MD00G1168000.v1.1 MD00G1168300.v1.1 MD00G1168700.v1.1 MD02G1293100.v1.1 MD02G1293200.v1.1 MD02G1314300.v1.1 MD03G1009000.v1.1 MD03G1009400.v1.1 MD03G1042300.v1.1 MD03G1042400.v1.1 MD07G1033600.v1.1 MD07G1033700.v1.1 MD07G1033900.v1.1 MD11G1011400.v1.1 MD11G1011700.v1.1 MD11G1029800.v1.1 MD11G1029900.v1.1 MD11G1030300.v1.1 MD11G1030400.v1.1 MD11G1030500.v1.1 MD11G1031300.v1.1 MD11G1031600.v1.1 MD11G1032000.v1.1 MD11G1033200.v1.1 MD11G1033600.v1.1 MD11G1033800.v1.1 MD11G1033900.v1.1 MD11G1034100.v1.1 MD11G1034400.v1.1 MD11G1040600.v1.1 MD11G1041100.v1.1 MD11G1043100.v1.1 MD11G1043500.v1.1 MD11G1044500.v1.1 MD11G1045100.v1.1 MD11G1045600.v1.1
prunus_persica Prupe.2G022400_v2.0.a1 Prupe.2G022400_v2.0.a1 Prupe.2G022400_v2.0.a1 Prupe.2G022500_v2.0.a1 Prupe.2G022500_v2.0.a1 Prupe.2G022900_v2.0.a1 Prupe.2G023500_v2.0.a1 Prupe.2G023500_v2.0.a1 Prupe.2G023500_v2.0.a1 Prupe.2G023500_v2.0.a1 Prupe.2G023500_v2.0.a1 Prupe.2G023500_v2.0.a1 Prupe.2G023600_v2.0.a1 Prupe.2G028000_v2.0.a1 Prupe.2G030200_v2.0.a1 Prupe.2G067600_v2.0.a1 Prupe.8G117900_v2.0.a1
pyrus_communis pycom02g26350 pycom03g03270 pycom07g02370 pycom11g00750 pycom11g00790 pycom11g02340 pycom11g02370 pycom11g02380 pycom11g02390 pycom11g02410 pycom11g02460 pycom11g02470 pycom11g02500 pycom11g02510 pycom11g02520 pycom11g02530 pycom11g02580 pycom11g02590 pycom11g02680 pycom11g02710 pycom11g02720 pycom11g02730 pycom11g02750 pycom11g02760 pycom11g02770 pycom11g03690 pycom13g25120 pycom13g25130 pycom13g25140 pycom13g25170 pycom13g25180 pycom13g25190 pycom13g25210
rosa_chinensis RchiOBHm_Chr1g0315001 RchiOBHm_Chr1g0315411 RchiOBHm_Chr1g0317951 RchiOBHm_Chr1g0319741 RchiOBHm_Chr1g0319841 RchiOBHm_Chr1g0319911 RchiOBHm_Chr1g0319991 RchiOBHm_Chr1g0320001 RchiOBHm_Chr1g0320021 RchiOBHm_Chr1g0320081 RchiOBHm_Chr1g0320111 RchiOBHm_Chr1g0320131 RchiOBHm_Chr1g0320161 RchiOBHm_Chr1g0320171 RchiOBHm_Chr1g0320241 RchiOBHm_Chr1g0320281 RchiOBHm_Chr1g0320411 RchiOBHm_Chr1g0320461 RchiOBHm_Chr1g0320551 RchiOBHm_Chr1g0320581 RchiOBHm_Chr1g0320661 RchiOBHm_Chr1g0320891 RchiOBHm_Chr1g0320971 RchiOBHm_Chr1g0321021 RchiOBHm_Chr1g0321031 RchiOBHm_Chr1g0321091 RchiOBHm_Chr1g0321351 RchiOBHm_Chr1g0321481 RchiOBHm_Chr1g0321491 RchiOBHm_Chr1g0327521 RchiOBHm_Chr1g0328061 RchiOBHm_Chr1g0334991 RchiOBHm_Chr1g0373781 RchiOBHm_Chr1g0373891 RchiOBHm_Chr1g0374841 RchiOBHm_Chr2g0131111 RchiOBHm_Chr2g0131121 RchiOBHm_Chr4g0408901 RchiOBHm_Chr5g0041691 RchiOBHm_Chr7g0237021
rosa_laevigata RLG00000019168 RLG00000030456 RLG00000030460 RLG00000030571
rosa_multiflora Rmu_co7963468.1_g000001 Rmu_co7991248.1_g000001 Rmu_co8195256.1_g000001 Rmu_co8312199.1_g000001 Rmu_co8349215.1_g000001 Rmu_co8351041.1_g000001 Rmu_co8422719.1_g000001 Rmu_co8450711.1_g000001 Rmu_co8465555.1_g000001 Rmu_co8489965.1_g000001 Rmu_sc0000087.1_g000014 Rmu_sc0000272.1_g000015 Rmu_sc0000724.1_g000006 Rmu_sc0000724.1_g000021 Rmu_sc0000724.1_g000022 Rmu_sc0000861.1_g000024 Rmu_sc0001049.1_g000006 Rmu_sc0001049.1_g000007 Rmu_sc0001512.1_g000001 Rmu_sc0002022.1_g000004 Rmu_sc0002063.1_g000011 Rmu_sc0002131.1_g000024 Rmu_sc0002337.1_g000012 Rmu_sc0002341.1_g000005 Rmu_sc0002539.1_g000117 Rmu_sc0002745.1_g000005 Rmu_sc0002745.1_g000006 Rmu_sc0003145.1_g000002 Rmu_sc0003199.1_g000007 Rmu_sc0003270.1_g000039 Rmu_sc0003270.1_g000040 Rmu_sc0003423.1_g000001 Rmu_sc0003423.1_g000002 Rmu_sc0003629.1_g000067 Rmu_sc0004039.1_g000002 Rmu_sc0004555.1_g000001 Rmu_sc0004555.1_g000005 Rmu_sc0004555.1_g000006 Rmu_sc0004947.1_g000025 Rmu_sc0004947.1_g000026 Rmu_sc0005255.1_g000025 Rmu_sc0007977.1_g000016 Rmu_sc0008752.1_g000005 Rmu_sc0009236.1_g000004 Rmu_sc0009236.1_g000008 Rmu_sc0009236.1_g000009 Rmu_sc0009236.1_g000010 Rmu_sc0011424.1_g000036 Rmu_sc0013413.1_g000001 Rmu_sc0013735.1_g000002 Rmu_sc0015304.1_g000002 Rmu_sc0015304.1_g000003 Rmu_sc0015585.1_g000001 Rmu_sc0018410.1_g000001 Rmu_sc0022723.1_g000001 Rmu_sc0022723.1_g000002 Rmu_sc0022724.1_g000001 Rmu_sc0023430.1_g000001 Rmu_sc0026053.1_g000001 Rmu_sc0026429.1_g000002 Rmu_sc0026647.1_g000001 Rmu_sc0031359.1_g000001 Rmu_ssc0000042.1_g000040 Rmu_ssc0000081.1_g000001 Rmu_ssc0000300.1_g000011
rosa_roxburghii Rroxscaffold_160G00433620 Rroxscaffold_160G00433990 Rroxscaffold_1G00038820 Rroxscaffold_2G00113190 Rroxscaffold_4G00283240 Rroxscaffold_4G00283930 Rroxscaffold_4G00284010 Rroxscaffold_4G00322600 Rroxscaffold_4G00327710 Rroxscaffold_4G00328100 Rroxscaffold_4G00328130 Rroxscaffold_4G00331590 Rroxscaffold_5G00353280
rosa_rugosa Rorug01G0004200 Rorug01G0018800 Rorug01G0018900 Rorug01G0029900 Rorug01G0030000 Rorug01G0030000 Rorug01G0030000 Rorug01G0030200 Rorug01G0030300 Rorug01G0030800 Rorug01G0032400 Rorug01G0032900 Rorug01G0055800 Rorug01G0067600 Rorug01G0067700 Rorug01G0067800 Rorug01G0067900 Rorug01G0068000 Rorug01G0379500 Rorug01G0379600 Rorug01G0379600 Rorug01G0385200 Rorug01G0385300 Rorug02G0295100 Rorug04G0088500 Rorug04G0088600 Rorug05G0194900 Rorug07G0301400
rosa_samantha Rh1AG014800 Rh1AG015200 Rh1AG030500 Rh1AG041800 Rh1AG042300 Rh1AG042700 Rh1AG042800 Rh1AG042900 Rh1AG045000 Rh1AG085100 Rh1AG085200 Rh1AG388600 Rh1AG396700 Rh1AG396900 Rh1BG007300 Rh1BG039200 Rh1BG039600 Rh1BG042800 Rh1BG067300 Rh1BG109700 Rh1BG109900 Rh1BG354000 Rh1CG043800 Rh1CG044400 Rh1DG008600 Rh1DG022900 Rh1DG023400 Rh1DG023600 Rh1DG023900 Rh1DG024100 Rh1DG024400 Rh1DG024500 Rh1DG025500 Rh1DG025700 Rh1DG026500 Rh1DG026800 Rh1DG038900 Rh1DG048800 Rh1DG049300 Rh1DG051700 Rh1DG052000 Rh1DG146200 Rh1DG383500 Rh2BG354900 Rh2CG333600 Rh4BG149600 Rh4BG149700 Rh4CG160600
rosa_wichuraiana Rw0G001100 Rw0G001130 Rw0G001180 Rw0G012580 Rw1G003480 Rw1G003540 Rw1G003600 Rw1G003640 Rw1G003670 Rw1G003750 Rw1G003940 Rw1G006650 Rw1G034550 Rw1G034560 Rw1G034650 Rw1G034660 Rw1G035170 Rw1G035190 Rw1G037060 Rw2G028210 Rw4G012540 Rw5G026370 Rw7G037900

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 843
AccB1I GGYRCC 1 cut(s) 843
AciI CCGC 2 cut(s) 150, 551
AclI AACGTT 1 cut(s) 1058
AclWI GGATC 1 cut(s) 13
AcsI RAATTY 6 cut(s) 116, 353, 558, 653, 814, 1066
AcuI CTGAAG 2 cut(s) 690, 962
AfaI GTAC 3 cut(s) 688, 777, 845
AflIII ACRYGT 1 cut(s) 608
AjiI CACGTC 1 cut(s) 611
AleI CACNNNNGTG 1 cut(s) 379
AluBI AGCT 3 cut(s) 285, 460, 1033
AluI AGCT 3 cut(s) 285, 460, 1033
Alw26I GTCTC 3 cut(s) 94, 569, 1125
AlwI GGATC 1 cut(s) 13
AoxI GGCC 1 cut(s) 1112
ApaI GGGCCC 1 cut(s) 1116
ApeKI GCWGC 3 cut(s) 70, 164, 548
ApoI RAATTY 6 cut(s) 116, 353, 558, 653, 814, 1066
ArsI GACNNNNNNTTYG 6 cut(s) 338, 370, 595, 598, 627, 630
AseI ATTAAT 2 cut(s) 866, 917
Asp700I GAANNNNTTC 3 cut(s) 63, 120, 499
Asp718I GGTACC 1 cut(s) 843
AspS9I GGNCC 2 cut(s) 1112, 1113
AsuHPI GGTGA 2 cut(s) 512, 542
BaeGI GKGCMC 1 cut(s) 1116
BanI GGYRCC 1 cut(s) 843
BanII GRGCYC 1 cut(s) 1116
BbsI GAAGAC 4 cut(s) 204, 438, 714, 950
BbvI GCAGC 3 cut(s) 82, 151, 535
BccI CCATC 4 cut(s) 379, 581, 635, 993
BcoDI GTCTC 3 cut(s) 94, 569, 1125
BfaI CTAG 2 cut(s) 468, 936
BisI GCNGC 3 cut(s) 71, 165, 549
BlsI GCNGC 3 cut(s) 72, 166, 550
BmgBI CACGTC 1 cut(s) 611
BmgT120I GGNCC 2 cut(s) 1112, 1113
BmiI GGNNCC 3 cut(s) 845, 1114, 1115
BmrI ACTGGG 1 cut(s) 624
BmsI GCATC 3 cut(s) 526, 844, 951
BmuI ACTGGG 1 cut(s) 624
BpiI GAAGAC 4 cut(s) 204, 438, 714, 950
BplI GAGNNNNNCTC 2 cut(s) 650, 682
BpuEI CTTGAG 2 cut(s) 1078, 1136
BsaBI GATNNNNATC 1 cut(s) 970
BsaI GGTCTC 1 cut(s) 94
BsaJI CCNNGG 1 cut(s) 159
Bse1I ACTGG 1 cut(s) 630
Bse8I GATNNNNATC 1 cut(s) 970
BseDI CCNNGG 1 cut(s) 159
BseGI GGATG 2 cut(s) 390, 592
BseJI GATNNNNATC 1 cut(s) 970
BseMII CTCAG 3 cut(s) 580, 795, 1034
BseNI ACTGG 1 cut(s) 630
BseSI GKGCMC 1 cut(s) 1116
BseXI GCAGC 3 cut(s) 82, 151, 535
Bsh1285I CGRYCG 1 cut(s) 1133
BshFI GGCC 1 cut(s) 1114
BshNI GGYRCC 1 cut(s) 843
BsiEI CGRYCG 1 cut(s) 1133
BsmAI GTCTC 3 cut(s) 94, 569, 1125
BsmI GAATGC 3 cut(s) 77, 662, 1026
BsnI GGCC 1 cut(s) 1114
Bso31I GGTCTC 1 cut(s) 94
Bsp120I GGGCCC 1 cut(s) 1112
Bsp1286I GDGCHC 1 cut(s) 1116
Bsp143I GATC 3 cut(s) 18, 532, 1130
BspACI CCGC 2 cut(s) 150, 551
BspANI GGCC 1 cut(s) 1114
BspCNI CTCAG 3 cut(s) 579, 796, 1035
BspHI TCATGA 1 cut(s) 81
BspLI GGNNCC 3 cut(s) 845, 1114, 1115
BspPI GGATC 1 cut(s) 13
BspT107I GGYRCC 1 cut(s) 843
BspTNI GGTCTC 1 cut(s) 94
BsrI ACTGG 1 cut(s) 630
BssECI CCNNGG 1 cut(s) 159
BssMI GATC 3 cut(s) 18, 532, 1130
BssT1I CCWWGG 1 cut(s) 159
Bst4CI ACNGT 4 cut(s) 26, 95, 500, 843
Bst6I CTCTTC 1 cut(s) 1128
BstAPI GCANNNNNTGC 1 cut(s) 1060
BstC8I GCNNGC 2 cut(s) 75, 954
BstDEI CTNAG 4 cut(s) 566, 804, 1034, 1043
BstF5I GGATG 2 cut(s) 390, 592
BstKTI GATC 3 cut(s) 21, 535, 1133
BstMAI GTCTC 3 cut(s) 94, 569, 1125
BstMBI GATC 3 cut(s) 18, 532, 1130
BstMCI CGRYCG 1 cut(s) 1133
BstMWI GCNNNNNNNGC 3 cut(s) 545, 1030, 1060
BstNSI RCATGY 1 cut(s) 77
BstSLI GKGCMC 1 cut(s) 1116
BstV1I GCAGC 3 cut(s) 82, 151, 535
BstV2I GAAGAC 4 cut(s) 204, 438, 714, 950
BstX2I RGATCY 1 cut(s) 18
BstYI RGATCY 1 cut(s) 18
BsuRI GGCC 1 cut(s) 1114
BtrI CACGTC 1 cut(s) 611
BtsCI GGATG 2 cut(s) 390, 592
BtsI GCAGTG 1 cut(s) 947
BtsIMutI CAGTG 3 cut(s) 22, 100, 947
Cac8I GCNNGC 2 cut(s) 75, 954
CciI TCATGA 1 cut(s) 81
Cfr13I GGNCC 2 cut(s) 1112, 1113
Csp6I GTAC 3 cut(s) 687, 776, 844
CviAII CATG 4 cut(s) 74, 82, 419, 722
CviQI GTAC 3 cut(s) 687, 776, 844
DdeI CTNAG 4 cut(s) 566, 804, 1034, 1043
DpnI GATC 3 cut(s) 20, 534, 1132
DpnII GATC 3 cut(s) 18, 532, 1130
DraI TTTAAA 1 cut(s) 999
Eam1104I CTCTTC 1 cut(s) 1128
EarI CTCTTC 1 cut(s) 1128
EciI GGCGGA 1 cut(s) 165
Eco130I CCWWGG 1 cut(s) 159
Eco24I GRGCYC 1 cut(s) 1116
Eco31I GGTCTC 1 cut(s) 94
Eco57I CTGAAG 2 cut(s) 690, 962
EcoO109I RGGNCCY 2 cut(s) 1112, 1113
EcoRI GAATTC 1 cut(s) 814
EcoT14I CCWWGG 1 cut(s) 159
EcoT22I ATGCAT 2 cut(s) 79, 519
EcoT38I GRGCYC 1 cut(s) 1116
ErhI CCWWGG 1 cut(s) 159
FaeI CATG 4 cut(s) 77, 85, 422, 725
FatI CATG 4 cut(s) 73, 81, 418, 721
FauI CCCGC 1 cut(s) 544
Fnu4HI GCNGC 3 cut(s) 71, 165, 549
FokI GGATG 2 cut(s) 397, 599
FriOI GRGCYC 1 cut(s) 1116
Fsp4HI GCNGC 3 cut(s) 71, 165, 549
FspBI CTAG 2 cut(s) 468, 936
GluI GCNGC 3 cut(s) 71, 165, 549
HaeIII GGCC 1 cut(s) 1114
Hin1II CATG 4 cut(s) 77, 85, 422, 725
HincII GTYRAC 3 cut(s) 91, 649, 1040
HindII GTYRAC 3 cut(s) 91, 649, 1040
HinfI GANTC 5 cut(s) 172, 241, 256, 884, 1091
HpaI GTTAAC 1 cut(s) 649
HphI GGTGA 2 cut(s) 512, 542
Hpy166II GTNNAC 4 cut(s) 91, 398, 649, 1040
Hpy188I TCNGA 3 cut(s) 43, 670, 706
Hpy188III TCNNGA 6 cut(s) 82, 125, 600, 743, 936, 1153
Hpy8I GTNNAC 4 cut(s) 91, 398, 649, 1040
HpyAV CCTTC 3 cut(s) 309, 1010, 1017
HpyCH4III ACNGT 4 cut(s) 26, 95, 500, 843
HpyCH4IV ACGT 3 cut(s) 610, 679, 1058
HpyCH4V TGCA 7 cut(s) 77, 167, 323, 517, 903, 956, 1054
HpyF10VI GCNNNNNNNGC 3 cut(s) 545, 1030, 1060
HpyF3I CTNAG 4 cut(s) 566, 804, 1034, 1043
HpySE526I ACGT 3 cut(s) 610, 679, 1058
Hsp92II CATG 4 cut(s) 77, 85, 422, 725
KpnI GGTACC 1 cut(s) 847
KspAI GTTAAC 1 cut(s) 649
Kzo9I GATC 3 cut(s) 18, 532, 1130
LpnPI CCDG 7 cut(s) 521, 553, 643, 688, 894, 966, 1130
Lsp1109I GCAGC 3 cut(s) 82, 151, 535
LweI GCATC 3 cut(s) 526, 844, 951
MaeI CTAG 2 cut(s) 468, 936
MaeII ACGT 3 cut(s) 610, 679, 1058
MaeIII GTNAC 6 cut(s) 257, 443, 716, 724, 824, 1088
MalI GATC 3 cut(s) 20, 534, 1132
MboI GATC 3 cut(s) 18, 532, 1130
MboII GAAGA 8 cut(s) 209, 287, 425, 443, 719, 955, 1115, 1118
MfeI CAATTG 2 cut(s) 368, 819
MflI RGATCY 1 cut(s) 18
MhlI GDGCHC 1 cut(s) 1116
MlyI GAGTC 4 cut(s) 166, 250, 265, 1085
MmeI TCCRAC 1 cut(s) 552
MnlI CCTC 5 cut(s) 385, 568, 652, 1128, 1158
Mph1103I ATGCAT 2 cut(s) 79, 519
MroXI GAANNNNTTC 3 cut(s) 63, 120, 499
MseI TTAA 5 cut(s) 264, 648, 866, 917, 998
MslI CAYNNNNRTG 1 cut(s) 379
MunI CAATTG 2 cut(s) 368, 819
Mva1269I GAATGC 3 cut(s) 77, 662, 1026
MwoI GCNNNNNNNGC 3 cut(s) 545, 1030, 1060
NdeII GATC 3 cut(s) 18, 532, 1130
NlaIII CATG 4 cut(s) 77, 85, 422, 725
NlaIV GGNNCC 3 cut(s) 845, 1114, 1115
NmuCI GTSAC 4 cut(s) 257, 443, 724, 1088
NsiI ATGCAT 2 cut(s) 79, 519
NspI RCATGY 1 cut(s) 77
OliI CACNNNNGTG 1 cut(s) 379
PaeI GCATGC 1 cut(s) 77
PagI TCATGA 1 cut(s) 81
PcsI WCGNNNNNNNCGW 1 cut(s) 607
PctI GAATGC 3 cut(s) 77, 662, 1026
PdmI GAANNNNTTC 3 cut(s) 63, 120, 499
PfeI GAWTC 1 cut(s) 884
PkrI GCNGC 3 cut(s) 72, 166, 550
Ple19I CGATCG 1 cut(s) 1133
PleI GAGTC 4 cut(s) 166, 249, 264, 1085
PpsI GAGTC 4 cut(s) 166, 249, 264, 1085
PshBI ATTAAT 2 cut(s) 866, 917
Psp1406I AACGTT 1 cut(s) 1058
PspN4I GGNNCC 3 cut(s) 845, 1114, 1115
PspOMI GGGCCC 1 cut(s) 1112
PspPI GGNCC 2 cut(s) 1112, 1113
PsuI RGATCY 1 cut(s) 18
PvuI CGATCG 1 cut(s) 1133
RsaI GTAC 3 cut(s) 688, 777, 845
RsaNI GTAC 3 cut(s) 687, 776, 844
RseI CAYNNNNRTG 1 cut(s) 379
SaqAI TTAA 5 cut(s) 264, 648, 866, 917, 998
SatI GCNGC 3 cut(s) 71, 165, 549
Sau3AI GATC 3 cut(s) 18, 532, 1130
Sau96I GGNCC 2 cut(s) 1112, 1113
SchI GAGTC 4 cut(s) 166, 250, 265, 1085
SduI GDGCHC 1 cut(s) 1116
SfaNI GCATC 3 cut(s) 526, 844, 951
SmiI ATTTAAAT 1 cut(s) 999
SmiMI CAYNNNNRTG 1 cut(s) 379
SmlI CTYRAG 2 cut(s) 1093, 1151
SmoI CTYRAG 2 cut(s) 1093, 1151
SphI GCATGC 1 cut(s) 77
SsiI CCGC 2 cut(s) 150, 551
SspI AATATT 2 cut(s) 222, 921
SspMI CTAG 2 cut(s) 468, 936
StyI CCWWGG 1 cut(s) 159
SwaI ATTTAAAT 1 cut(s) 999
TaaI ACNGT 4 cut(s) 26, 95, 500, 843
TaiI ACGT 3 cut(s) 613, 682, 1061
TaqI TCGA 4 cut(s) 124, 601, 1129, 1133
TfiI GAWTC 1 cut(s) 884
Tru1I TTAA 5 cut(s) 264, 648, 866, 917, 998
Tru9I TTAA 5 cut(s) 264, 648, 866, 917, 998
TscAI CASTG 3 cut(s) 29, 100, 954
TseFI GTSAC 4 cut(s) 257, 443, 724, 1088
TseI GCWGC 3 cut(s) 70, 164, 548
Tsp45I GTSAC 4 cut(s) 257, 443, 724, 1088
TspDTI ATGAA 7 cut(s) 70, 98, 291, 366, 435, 492, 999
TspRI CASTG 3 cut(s) 29, 100, 954
VspI ATTAAT 2 cut(s) 866, 917
XapI RAATTY 6 cut(s) 116, 353, 558, 653, 814, 1066
XbaI TCTAGA 1 cut(s) 935
XceI RCATGY 1 cut(s) 77
XmnI GAANNNNTTC 3 cut(s) 63, 120, 499
XspI CTAG 2 cut(s) 468, 936
Zsp2I ATGCAT 2 cut(s) 79, 519
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.