FvH4_7g26980

disease resistance

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb7
Physical Location & Seq
Forward (+)
20254356 .. 20255090
735 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_7g26980.t1

Sequence Viewer

Length: 735 bp
ATGAAAAACTTGAAAAATGTTAAAGAGTTGAATATCACTGGTTGTGAGGAGCTTACATGTTGCTTTCAAAATGAGGATAGATTACTGCAACACTTGATTTCTCCTGGTCGTATGTATATCGAAGACAACTCGATCCTTGTTGAAAGGCTAGGGATTGAAGCAGAGCAGTTGGTGCAATTGCGAATCCTGGATTGCAATATTGAACGTCTGGAATTAAGCGAGTGTGGAAGCCTTGTGAAGGTACCAGAAAGATATCATCACCTTAGATCACTTCAAGAGCTGCACATAAGTAAATGTTCAAGTCTTGTTTCTTTTCCATATGTTGGTCTGCCACATTGTCTCCAAGTCATAGTGATTGAGGACTGCGAATCTCTTTCACACTTCGCAAAATACCAGATTTCTCCCAGCCTAAAAATAATAGAGATTGAGAATTGTGGGAATTTGAAGTCATTAATAGAGAAAGAGGAGGAGGTGGGTGACGGTTCTTCTTCTTCTTGTCTTGAGAGTTTGATGATAAGGGGATGTCCCTTTTTGATGTGCTTATTATGCAAAGGTCAATTACCCAGGTCTGTTAAACAGCCTGAGATACGGAATTGTGGTGATCTGGAGCTAATAACCGAGAGGTTCCTCGATGACAGCTACCAACTCGAAGAAATTTACATCTGGGACTGCCTAAACTTGAAATCCTTACCCGAGGGACTGTGCGACCTCACCAACCTTCGGTCATTCAAGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

245

Amino Acids

27.9

Weight (kDa)

4.97

Isoelectric Point (pI)

74.61

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000070)

Species Orthologous Gene IDs
fragaria_vesca FvH4_7g00360 FvH4_7g00850 FvH4_7g02400 FvH4_7g02430 FvH4_7g02450 FvH4_7g25671 FvH4_7g25680 FvH4_7g25683 FvH4_7g26980 FvH4_7g27330 FvH4_7g27355 FvH4_7g27610 FvH4_7g27642 FvH4_7g27890 FvH4_7g27891 FvH4_7g27891 FvH4_7g27891 FvH4_7g28110 FvH4_7g28390
malus_domestica MD00G1070800.v1.1 MD00G1168000.v1.1 MD00G1168300.v1.1 MD00G1168700.v1.1 MD02G1293100.v1.1 MD02G1293200.v1.1 MD02G1314300.v1.1 MD03G1009000.v1.1 MD03G1009400.v1.1 MD03G1042300.v1.1 MD03G1042400.v1.1 MD07G1033600.v1.1 MD07G1033700.v1.1 MD07G1033900.v1.1 MD11G1011400.v1.1 MD11G1011700.v1.1 MD11G1029800.v1.1 MD11G1029900.v1.1 MD11G1030300.v1.1 MD11G1030400.v1.1 MD11G1030500.v1.1 MD11G1031300.v1.1 MD11G1031600.v1.1 MD11G1032000.v1.1 MD11G1033200.v1.1 MD11G1033600.v1.1 MD11G1033800.v1.1 MD11G1033900.v1.1 MD11G1034100.v1.1 MD11G1034400.v1.1 MD11G1040600.v1.1 MD11G1041100.v1.1 MD11G1043100.v1.1 MD11G1043500.v1.1 MD11G1044500.v1.1 MD11G1045100.v1.1 MD11G1045600.v1.1
prunus_persica Prupe.2G022400_v2.0.a1 Prupe.2G022400_v2.0.a1 Prupe.2G022400_v2.0.a1 Prupe.2G022500_v2.0.a1 Prupe.2G022500_v2.0.a1 Prupe.2G022900_v2.0.a1 Prupe.2G023500_v2.0.a1 Prupe.2G023500_v2.0.a1 Prupe.2G023500_v2.0.a1 Prupe.2G023500_v2.0.a1 Prupe.2G023500_v2.0.a1 Prupe.2G023500_v2.0.a1 Prupe.2G023600_v2.0.a1 Prupe.2G028000_v2.0.a1 Prupe.2G030200_v2.0.a1 Prupe.2G067600_v2.0.a1 Prupe.8G117900_v2.0.a1
pyrus_communis pycom02g26350 pycom03g03270 pycom07g02370 pycom11g00750 pycom11g00790 pycom11g02340 pycom11g02370 pycom11g02380 pycom11g02390 pycom11g02410 pycom11g02460 pycom11g02470 pycom11g02500 pycom11g02510 pycom11g02520 pycom11g02530 pycom11g02580 pycom11g02590 pycom11g02680 pycom11g02710 pycom11g02720 pycom11g02730 pycom11g02750 pycom11g02760 pycom11g02770 pycom11g03690 pycom13g25120 pycom13g25130 pycom13g25140 pycom13g25170 pycom13g25180 pycom13g25190 pycom13g25210
rosa_chinensis RchiOBHm_Chr1g0315001 RchiOBHm_Chr1g0315411 RchiOBHm_Chr1g0317951 RchiOBHm_Chr1g0319741 RchiOBHm_Chr1g0319841 RchiOBHm_Chr1g0319911 RchiOBHm_Chr1g0319991 RchiOBHm_Chr1g0320001 RchiOBHm_Chr1g0320021 RchiOBHm_Chr1g0320081 RchiOBHm_Chr1g0320111 RchiOBHm_Chr1g0320131 RchiOBHm_Chr1g0320161 RchiOBHm_Chr1g0320171 RchiOBHm_Chr1g0320241 RchiOBHm_Chr1g0320281 RchiOBHm_Chr1g0320411 RchiOBHm_Chr1g0320461 RchiOBHm_Chr1g0320551 RchiOBHm_Chr1g0320581 RchiOBHm_Chr1g0320661 RchiOBHm_Chr1g0320891 RchiOBHm_Chr1g0320971 RchiOBHm_Chr1g0321021 RchiOBHm_Chr1g0321031 RchiOBHm_Chr1g0321091 RchiOBHm_Chr1g0321351 RchiOBHm_Chr1g0321481 RchiOBHm_Chr1g0321491 RchiOBHm_Chr1g0327521 RchiOBHm_Chr1g0328061 RchiOBHm_Chr1g0334991 RchiOBHm_Chr1g0373781 RchiOBHm_Chr1g0373891 RchiOBHm_Chr1g0374841 RchiOBHm_Chr2g0131111 RchiOBHm_Chr2g0131121 RchiOBHm_Chr4g0408901 RchiOBHm_Chr5g0041691 RchiOBHm_Chr7g0237021
rosa_laevigata RLG00000019168 RLG00000030456 RLG00000030460 RLG00000030571
rosa_multiflora Rmu_co7963468.1_g000001 Rmu_co7991248.1_g000001 Rmu_co8195256.1_g000001 Rmu_co8312199.1_g000001 Rmu_co8349215.1_g000001 Rmu_co8351041.1_g000001 Rmu_co8422719.1_g000001 Rmu_co8450711.1_g000001 Rmu_co8465555.1_g000001 Rmu_co8489965.1_g000001 Rmu_sc0000087.1_g000014 Rmu_sc0000272.1_g000015 Rmu_sc0000724.1_g000006 Rmu_sc0000724.1_g000021 Rmu_sc0000724.1_g000022 Rmu_sc0000861.1_g000024 Rmu_sc0001049.1_g000006 Rmu_sc0001049.1_g000007 Rmu_sc0001512.1_g000001 Rmu_sc0002022.1_g000004 Rmu_sc0002063.1_g000011 Rmu_sc0002131.1_g000024 Rmu_sc0002337.1_g000012 Rmu_sc0002341.1_g000005 Rmu_sc0002539.1_g000117 Rmu_sc0002745.1_g000005 Rmu_sc0002745.1_g000006 Rmu_sc0003145.1_g000002 Rmu_sc0003199.1_g000007 Rmu_sc0003270.1_g000039 Rmu_sc0003270.1_g000040 Rmu_sc0003423.1_g000001 Rmu_sc0003423.1_g000002 Rmu_sc0003629.1_g000067 Rmu_sc0004039.1_g000002 Rmu_sc0004555.1_g000001 Rmu_sc0004555.1_g000005 Rmu_sc0004555.1_g000006 Rmu_sc0004947.1_g000025 Rmu_sc0004947.1_g000026 Rmu_sc0005255.1_g000025 Rmu_sc0007977.1_g000016 Rmu_sc0008752.1_g000005 Rmu_sc0009236.1_g000004 Rmu_sc0009236.1_g000008 Rmu_sc0009236.1_g000009 Rmu_sc0009236.1_g000010 Rmu_sc0011424.1_g000036 Rmu_sc0013413.1_g000001 Rmu_sc0013735.1_g000002 Rmu_sc0015304.1_g000002 Rmu_sc0015304.1_g000003 Rmu_sc0015585.1_g000001 Rmu_sc0018410.1_g000001 Rmu_sc0022723.1_g000001 Rmu_sc0022723.1_g000002 Rmu_sc0022724.1_g000001 Rmu_sc0023430.1_g000001 Rmu_sc0026053.1_g000001 Rmu_sc0026429.1_g000002 Rmu_sc0026647.1_g000001 Rmu_sc0031359.1_g000001 Rmu_ssc0000042.1_g000040 Rmu_ssc0000081.1_g000001 Rmu_ssc0000300.1_g000011
rosa_roxburghii Rroxscaffold_160G00433620 Rroxscaffold_160G00433990 Rroxscaffold_1G00038820 Rroxscaffold_2G00113190 Rroxscaffold_4G00283240 Rroxscaffold_4G00283930 Rroxscaffold_4G00284010 Rroxscaffold_4G00322600 Rroxscaffold_4G00327710 Rroxscaffold_4G00328100 Rroxscaffold_4G00328130 Rroxscaffold_4G00331590 Rroxscaffold_5G00353280
rosa_rugosa Rorug01G0004200 Rorug01G0018800 Rorug01G0018900 Rorug01G0029900 Rorug01G0030000 Rorug01G0030000 Rorug01G0030000 Rorug01G0030200 Rorug01G0030300 Rorug01G0030800 Rorug01G0032400 Rorug01G0032900 Rorug01G0055800 Rorug01G0067600 Rorug01G0067700 Rorug01G0067800 Rorug01G0067900 Rorug01G0068000 Rorug01G0379500 Rorug01G0379600 Rorug01G0379600 Rorug01G0385200 Rorug01G0385300 Rorug02G0295100 Rorug04G0088500 Rorug04G0088600 Rorug05G0194900 Rorug07G0301400
rosa_samantha Rh1AG014800 Rh1AG015200 Rh1AG030500 Rh1AG041800 Rh1AG042300 Rh1AG042700 Rh1AG042800 Rh1AG042900 Rh1AG045000 Rh1AG085100 Rh1AG085200 Rh1AG388600 Rh1AG396700 Rh1AG396900 Rh1BG007300 Rh1BG039200 Rh1BG039600 Rh1BG042800 Rh1BG067300 Rh1BG109700 Rh1BG109900 Rh1BG354000 Rh1CG043800 Rh1CG044400 Rh1DG008600 Rh1DG022900 Rh1DG023400 Rh1DG023600 Rh1DG023900 Rh1DG024100 Rh1DG024400 Rh1DG024500 Rh1DG025500 Rh1DG025700 Rh1DG026500 Rh1DG026800 Rh1DG038900 Rh1DG048800 Rh1DG049300 Rh1DG051700 Rh1DG052000 Rh1DG146200 Rh1DG383500 Rh2BG354900 Rh2CG333600 Rh4BG149600 Rh4BG149700 Rh4CG160600
rosa_wichuraiana Rw0G001100 Rw0G001130 Rw0G001180 Rw0G012580 Rw1G003480 Rw1G003540 Rw1G003600 Rw1G003640 Rw1G003670 Rw1G003750 Rw1G003940 Rw1G006650 Rw1G034550 Rw1G034560 Rw1G034650 Rw1G034660 Rw1G035170 Rw1G035190 Rw1G037060 Rw2G028210 Rw4G012540 Rw5G026370 Rw7G037900

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 241
AccB1I GGYRCC 1 cut(s) 241
AccB7I CCANNNNNTGG 1 cut(s) 323
AclWI GGATC 1 cut(s) 127
AcsI RAATTY 2 cut(s) 439, 654
AfaI GTAC 1 cut(s) 243
AfiI CCNNNNNNNGG 3 cut(s) 238, 323, 720
AflIII ACRYGT 1 cut(s) 56
AjnI CCWGG 3 cut(s) 103, 186, 563
AluBI AGCT 4 cut(s) 52, 280, 610, 639
AluI AGCT 4 cut(s) 52, 280, 610, 639
Alw26I GTCTC 1 cut(s) 344
AlwI GGATC 1 cut(s) 127
Ama87I CYCGRG 1 cut(s) 692
ApeKI GCWGC 1 cut(s) 280
ApoI RAATTY 2 cut(s) 439, 654
AseI ATTAAT 1 cut(s) 452
Asp718I GGTACC 1 cut(s) 241
AsuHPI GGTGA 4 cut(s) 251, 488, 611, 703
AvaI CYCGRG 1 cut(s) 692
BanI GGYRCC 1 cut(s) 241
BbsI GAAGAC 1 cut(s) 129
BbvI GCAGC 1 cut(s) 267
BciT130I CCWGG 3 cut(s) 105, 188, 565
BcoDI GTCTC 1 cut(s) 344
BfaI CTAG 1 cut(s) 149
BisI GCNGC 1 cut(s) 281
BlsI GCNGC 1 cut(s) 282
Bme1390I CCNGG 3 cut(s) 105, 188, 565
BmeT110I CYCGRG 1 cut(s) 692
BmiI GGNNCC 2 cut(s) 243, 626
BmrFI CCNGG 3 cut(s) 105, 188, 565
BpiI GAAGAC 1 cut(s) 129
BpmI CTGGAG 1 cut(s) 626
BpuEI CTTGAG 1 cut(s) 521
BsaJI CCNNGG 2 cut(s) 563, 693
BsaXI ACNNNNNCTCC 2 cut(s) 324, 354
Bsc4I CCNNNNNNNGG 3 cut(s) 238, 323, 720
Bse1I ACTGG 1 cut(s) 43
BseBI CCWGG 3 cut(s) 105, 188, 565
BseDI CCNNGG 2 cut(s) 563, 693
BseGI GGATG 1 cut(s) 527
BseLI CCNNNNNNNGG 3 cut(s) 238, 323, 720
BseMII CTCAG 1 cut(s) 573
BseNI ACTGG 1 cut(s) 43
BseRI GAGGAG 3 cut(s) 62, 479, 482
BseXI GCAGC 1 cut(s) 267
BseYI CCCAGC 1 cut(s) 404
BsgI GTGCAG 1 cut(s) 266
BshNI GGYRCC 1 cut(s) 241
BsiHKCI CYCGRG 1 cut(s) 692
BslFI GGGAC 3 cut(s) 510, 680, 711
BslI CCNNNNNNNGG 3 cut(s) 238, 323, 720
BsmAI GTCTC 1 cut(s) 344
BsmFI GGGAC 3 cut(s) 510, 680, 711
BsoBI CYCGRG 1 cut(s) 692
Bsp143I GATC 3 cut(s) 132, 266, 601
BspCNI CTCAG 1 cut(s) 574
BspLI GGNNCC 2 cut(s) 243, 626
BspPI GGATC 1 cut(s) 127
BspT107I GGYRCC 1 cut(s) 241
BsrI ACTGG 1 cut(s) 43
BssECI CCNNGG 2 cut(s) 563, 693
BssMI GATC 3 cut(s) 132, 266, 601
Bst2UI CCWGG 3 cut(s) 105, 188, 565
Bst4CI ACNGT 2 cut(s) 482, 702
BstAPI GCANNNNNTGC 1 cut(s) 172
BstDEI CTNAG 2 cut(s) 263, 582
BstENI CCTNNNNNAGG 1 cut(s) 236
BstF5I GGATG 1 cut(s) 527
BstKTI GATC 3 cut(s) 135, 269, 604
BstMAI GTCTC 1 cut(s) 344
BstMBI GATC 3 cut(s) 132, 266, 601
BstMWI GCNNNNNNNGC 2 cut(s) 172, 546
BstNI CCWGG 3 cut(s) 105, 188, 565
BstNSI RCATGY 1 cut(s) 60
BstSCI CCNGG 3 cut(s) 103, 186, 563
BstV1I GCAGC 1 cut(s) 267
BstV2I GAAGAC 1 cut(s) 129
BtsCI GGATG 1 cut(s) 527
BtsIMutI CAGTG 1 cut(s) 36
Csp6I GTAC 1 cut(s) 242
CviAII CATG 1 cut(s) 57
CviJI RGCY 8 cut(s) 52, 148, 231, 280, 408, 580, 610, 639
CviKI_1 RGCY 8 cut(s) 52, 148, 231, 280, 408, 580, 610, 639
CviQI GTAC 1 cut(s) 242
DdeI CTNAG 2 cut(s) 263, 582
DpnI GATC 3 cut(s) 134, 268, 603
DpnII GATC 3 cut(s) 132, 266, 601
Eco32I GATATC 1 cut(s) 254
Eco88I CYCGRG 1 cut(s) 692
EcoNI CCTNNNNNAGG 1 cut(s) 236
EcoRII CCWGG 3 cut(s) 103, 186, 563
EcoRV GATATC 1 cut(s) 254
FaeI CATG 1 cut(s) 60
FaiI YATR 8 cut(s) 58, 113, 117, 287, 319, 321, 350, 547
FaqI GGGAC 3 cut(s) 510, 680, 711
FatI CATG 1 cut(s) 56
FauNDI CATATG 1 cut(s) 319
Fnu4HI GCNGC 1 cut(s) 281
FokI GGATG 1 cut(s) 534
Fsp4HI GCNGC 1 cut(s) 281
FspBI CTAG 1 cut(s) 149
GluI GCNGC 1 cut(s) 281
GsaI CCCAGC 1 cut(s) 408
GsuI CTGGAG 1 cut(s) 626
Hin1II CATG 1 cut(s) 60
HinfI GANTC 2 cut(s) 183, 368
HphI GGTGA 4 cut(s) 251, 488, 611, 703
Hpy188III TCNNGA 4 cut(s) 209, 275, 500, 605
HpyAV CCTTC 2 cut(s) 232, 728
HpyCH4III ACNGT 2 cut(s) 482, 702
HpyCH4IV ACGT 1 cut(s) 205
HpyCH4V TGCA 5 cut(s) 88, 175, 195, 283, 549
HpyF10VI GCNNNNNNNGC 2 cut(s) 172, 546
HpyF3I CTNAG 2 cut(s) 263, 582
HpySE526I ACGT 1 cut(s) 205
Hsp92II CATG 1 cut(s) 60
KpnI GGTACC 1 cut(s) 245
Kzo9I GATC 3 cut(s) 132, 266, 601
LmnI GCTCC 2 cut(s) 49, 607
Lsp1109I GCAGC 1 cut(s) 267
MaeI CTAG 1 cut(s) 149
MaeII ACGT 1 cut(s) 205
MaeIII GTNAC 1 cut(s) 476
MalI GATC 3 cut(s) 134, 268, 603
MboI GATC 3 cut(s) 132, 266, 601
MboII GAAGA 5 cut(s) 134, 477, 480, 483, 662
MfeI CAATTG 1 cut(s) 176
MluCI AATT 7 cut(s) 176, 212, 430, 439, 557, 592, 654
MseI TTAA 4 cut(s) 21, 215, 452, 573
MslI CAYNNNNRTG 1 cut(s) 730
MspR9I CCNGG 3 cut(s) 105, 188, 565
MunI CAATTG 1 cut(s) 176
MvaI CCWGG 3 cut(s) 105, 188, 565
MwoI GCNNNNNNNGC 2 cut(s) 172, 546
NdeI CATATG 1 cut(s) 319
NdeII GATC 3 cut(s) 132, 266, 601
NlaIII CATG 1 cut(s) 60
NlaIV GGNNCC 2 cut(s) 243, 626
NmuCI GTSAC 1 cut(s) 476
NspI RCATGY 1 cut(s) 60
PciI ACATGT 1 cut(s) 56
PfeI GAWTC 2 cut(s) 183, 368
PflMI CCANNNNNTGG 1 cut(s) 323
PfoI TCCNGGA 1 cut(s) 186
PkrI GCNGC 1 cut(s) 282
PscI ACATGT 1 cut(s) 56
PshBI ATTAAT 1 cut(s) 452
Psp6I CCWGG 3 cut(s) 103, 186, 563
PspFI CCCAGC 1 cut(s) 404
PspGI CCWGG 3 cut(s) 103, 186, 563
PspN4I GGNNCC 2 cut(s) 243, 626
RsaI GTAC 1 cut(s) 243
RsaNI GTAC 1 cut(s) 242
RseI CAYNNNNRTG 1 cut(s) 730
SaqAI TTAA 4 cut(s) 21, 215, 452, 573
SatI GCNGC 1 cut(s) 281
Sau3AI GATC 3 cut(s) 132, 266, 601
ScrFI CCNGG 3 cut(s) 105, 188, 565
SmiMI CAYNNNNRTG 1 cut(s) 730
SmlI CTYRAG 1 cut(s) 500
SmoI CTYRAG 1 cut(s) 500
Sse9I AATT 7 cut(s) 176, 212, 430, 439, 557, 592, 654
SspI AATATT 1 cut(s) 199
SspMI CTAG 1 cut(s) 149
StyD4I CCNGG 3 cut(s) 103, 186, 563
TaaI ACNGT 2 cut(s) 482, 702
TaiI ACGT 1 cut(s) 208
TaqI TCGA 4 cut(s) 120, 131, 630, 648
TaqII GACCGA 1 cut(s) 711
TasI AATT 7 cut(s) 176, 212, 430, 439, 557, 592, 654
TfiI GAWTC 2 cut(s) 183, 368
Tru1I TTAA 4 cut(s) 21, 215, 452, 573
Tru9I TTAA 4 cut(s) 21, 215, 452, 573
TscAI CASTG 1 cut(s) 43
TseFI GTSAC 1 cut(s) 476
TseI GCWGC 1 cut(s) 280
Tsp45I GTSAC 1 cut(s) 476
TspDTI ATGAA 1 cut(s) 17
TspGWI ACGGA 1 cut(s) 604
TspRI CASTG 1 cut(s) 43
Van91I CCANNNNNTGG 1 cut(s) 323
VspI ATTAAT 1 cut(s) 452
XagI CCTNNNNNAGG 1 cut(s) 236
XapI RAATTY 2 cut(s) 439, 654
XceI RCATGY 1 cut(s) 60
XspI CTAG 1 cut(s) 149
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.