Rmu_sc0003145.1_g000002

disease resistance

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0003145.1
Physical Location & Seq
Forward (+)
9289 .. 13461
4173 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0003145.1_g000002.1.cds

Sequence Viewer

Length: 4173 bp
atgggagaggctgttcttggggcattccttccggtgctgctcgacaagttagagcatcgagaggtctttcagtacttcggacgccttaagggagttgacaaaaaggtgctggagaaatggactagaatgttgactgcaattgaagcggtgcttagtgatgcggaggagaagcaacttacacaaagagcagtgaaactatggctagatgatctcagagatttggcttacgatattgaagacatattggacatatttgctactaaaatgttgaaacgaaggatagaaagacaagaaggaagcagacgcaagttgtcgatcagctcactttctaaacttaaattcaattttagtcggaactcagaaatccagaagatcactgatcggttagaagatatatcgaatcgagaaaagcagtttggtttgaagaaacttggagtgtctaaaaagccatggaaaatgccacccactacttctcaactagatgggcctgtgatcggaagggatgaagcaaaagcaaaaattcttgatgatctgctctcaaatggcgaacatagtaccagcaattttcagaattttcatgtggtttccattgttggtacgggtggagtaggaaagacaacacttgctaaacatgtattcaacgatgctgtaacagaacagttttacccaaagggatgggtgtctgtgtccgatgacttcgaccttctaagggtgacaactgcagttcttgaatctgtcacgtcaggtgatgtgaaggaatccaaagagctcaattcagttcaggagaagctgagtaaggaattggctggcaaaaagtttttaattgttctagatgatgtctggaatacatgcaactacgatcaatggacaacattgcagtccgcctttcgtgttggagcagtaggaagcaagatcattgttactacgcgggatgcgaatgttgcaaaaatgatgggagacactagccctcgtaacttggagtcgatgtcagaagatgattgttggaaaatctttgtgcaccatgcactcttaaacaacagaccccaagatgttgagttattgaaggagaaaattgtagtaaaatgcaacggattgccgttggctgcaaggacacttgggggtcttttacgttgtaaaagagtagacgaatgggaagaaatattagaccacaagatgtggaatctatccgaccagatgggcatccttccagcattacaattgagctatcactatctcccttcgaatttgaaacggtgcttcacctactgcgcaatacttccaaatgattatgaatttggggagatgcaattgatcattctgtggatggcagagggtttgattccgcaggaagccggagagaataaacaaatggaagatttgggccgtcactattttcgagagttggtgtctaggtcattatttcaaaaatcaagcaaaggaaactcgcgatacataatgcatgacctcattacagatttggcacgttgggctgcaggaaattcatgttctagattggaggatatgcagaattatgactcatcgcgacgtagattggttcgtcattcgtcttacattcctggtatgtatgatgggattaaaaagtttggggtctattctgaagctatatgtttgcggacattcttaccactatcaccatcagattaccaccttgatcattatctggctcaaaaggttacttctgatttattgcccaaactccaatacttacgactgctctctttgaatggatataaaatgaccgagctgccaaatacaattggtaaattgaagcatctacggtatcttgatctttctcgcactgaaataagaagtttgccagactcaacaaccactctttacaacttacaaacattgatattggacaactgtcatcgattgaaggcactacccacaggcatgaggaatctagttaatttgcgtcacctcatgaattcgcgtacatcttcattggtagaaatgcctcctcagcttggtcgattgactaatctccaaacattgcctaattttgttattggcaaagctggtagtggatcaggagtaagagagattgggtcattgttgcatctgcaagggacattgcacctatcaagactagaaaatgtagattgtgtcgaggacgctgggactgccagcttaaagagcaaggaggggcttgaagctctgtttctttcgtggtcttcttcaagtgattcaacagaaattgcaaaccatgtgcttgacatgttacaacctcataccaaactcaaagagctcaccatccaagattatgccggattgaaattttcaacatggattggagacccttcattctctaatatggtgcgtgtaaggttagcaggttgtcatcattgtcaattcttgccaccattcggacagttgcattctctcaaagaactctctatacaagaaatggatgcagtggaaagtgttggtattgagttctatggagaaggaaacttgccgtttcaagctttagagacccttgattttgggaatctgaaaaattggaagaaatggtctgcttgccaacaaaatgagggggttggggttttctctagcctgaaaaagctttgcatcagcgactgccccaaattggagggtagtttaccggagaagcttgattcattagcacagcttcagatatttggatgtgaggaattggtggtttcaatatccaattataaacagcttcatgattcaaacatcaacaactgcaagatggtggtttacgacacaagtccagttctcttggacttactagagaggttgacattttcaaatgtttcagaggtgagattcgaaagagaggcgttcatgaaaagcttgaaaaatgttaaagagttgaagattactggttgtgaggagctgacatgttcctttcagaatgaggatagattactgcaacatttgatttctcttggtcgtttttgtattgaagacaactctgcccttgttgagaagttagggaaagaagcagagcagttggtgcaattgcaaatactggattgtaagcttgaacgtctgcaattaagcaagtgtggaagccttttgaaggtaccagaaggattgcatcaccttacatctcttcaagagcttcacataaagggatgttcgagtcttgtttcttttccggatgttggtctgccaccttgtcttcaagtcatagagattcggaagtgcgattctctgttgcactttgcaaaataccagattcctccaagcctaaaaagaatagagattcgggaatgtgagaaattgaaatcattgatagagaaagaggaggtggtggtggatggttcttgttcgtcttattctcttgaggatttggccataaggaactgtccatctctgttgtttttattatgcaaaggccaattacccagggctcttaaacagctttggatagagaattgtagacagctggagttaataagtgagaggttcctcgatgacacctgtcaactcgaaagtattctcatctggaactgcccaaaccttaaatccttacctgagggactcaccaatcttcagtcattaactatttgggattgtcaaagtctggtttcgttgccgagaatgagtgtgtggccaagagctacgactatcagacattgtgagaaattggaggtggcacacttgctgagagacatgatgcacactgagatattgtggattgattactgtgaaggtttgactactacttcctttcccccccacctaacatcacttgaaattaacgagatcaagaattgtaaggcgctgatggaatctcaagggttgcacagactcacctctttgagagaattgcggatctacggtggtagagatgatcgaggtctggtgtcctttccacctggtgagaattcgaaggagaaggagatgctgctccccagatctcttgttgaattgacaattggattcttcccaaatctaaagaaactgagcaagggctttcaatccctcacctctcttgagagtctttacatctgtaactgtccgaagctcacaaccattccagaggagggcctgcctctttcacttactcaacttaggatttgggactgtcctctacttgaagagagatgcaaaggacgataccggcccaagatagcacacatccctcgcgtcaaaattaggggctcctggatctag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

1390

Amino Acids

157.94

Weight (kDa)

7.05

Isoelectric Point (pI)

46.66

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0000070)

Species Orthologous Gene IDs
fragaria_vesca FvH4_7g00360 FvH4_7g00850 FvH4_7g02400 FvH4_7g02430 FvH4_7g02450 FvH4_7g25671 FvH4_7g25680 FvH4_7g25683 FvH4_7g26980 FvH4_7g27330 FvH4_7g27355 FvH4_7g27610 FvH4_7g27642 FvH4_7g27890 FvH4_7g27891 FvH4_7g27891 FvH4_7g27891 FvH4_7g28110 FvH4_7g28390
malus_domestica MD00G1070800.v1.1 MD00G1168000.v1.1 MD00G1168300.v1.1 MD00G1168700.v1.1 MD02G1293100.v1.1 MD02G1293200.v1.1 MD02G1314300.v1.1 MD03G1009000.v1.1 MD03G1009400.v1.1 MD03G1042300.v1.1 MD03G1042400.v1.1 MD07G1033600.v1.1 MD07G1033700.v1.1 MD07G1033900.v1.1 MD11G1011400.v1.1 MD11G1011700.v1.1 MD11G1029800.v1.1 MD11G1029900.v1.1 MD11G1030300.v1.1 MD11G1030400.v1.1 MD11G1030500.v1.1 MD11G1031300.v1.1 MD11G1031600.v1.1 MD11G1032000.v1.1 MD11G1033200.v1.1 MD11G1033600.v1.1 MD11G1033800.v1.1 MD11G1033900.v1.1 MD11G1034100.v1.1 MD11G1034400.v1.1 MD11G1040600.v1.1 MD11G1041100.v1.1 MD11G1043100.v1.1 MD11G1043500.v1.1 MD11G1044500.v1.1 MD11G1045100.v1.1 MD11G1045600.v1.1
prunus_persica Prupe.2G022400_v2.0.a1 Prupe.2G022400_v2.0.a1 Prupe.2G022400_v2.0.a1 Prupe.2G022500_v2.0.a1 Prupe.2G022500_v2.0.a1 Prupe.2G022900_v2.0.a1 Prupe.2G023500_v2.0.a1 Prupe.2G023500_v2.0.a1 Prupe.2G023500_v2.0.a1 Prupe.2G023500_v2.0.a1 Prupe.2G023500_v2.0.a1 Prupe.2G023500_v2.0.a1 Prupe.2G023600_v2.0.a1 Prupe.2G028000_v2.0.a1 Prupe.2G030200_v2.0.a1 Prupe.2G067600_v2.0.a1 Prupe.8G117900_v2.0.a1
pyrus_communis pycom02g26350 pycom03g03270 pycom07g02370 pycom11g00750 pycom11g00790 pycom11g02340 pycom11g02370 pycom11g02380 pycom11g02390 pycom11g02410 pycom11g02460 pycom11g02470 pycom11g02500 pycom11g02510 pycom11g02520 pycom11g02530 pycom11g02580 pycom11g02590 pycom11g02680 pycom11g02710 pycom11g02720 pycom11g02730 pycom11g02750 pycom11g02760 pycom11g02770 pycom11g03690 pycom13g25120 pycom13g25130 pycom13g25140 pycom13g25170 pycom13g25180 pycom13g25190 pycom13g25210
rosa_chinensis RchiOBHm_Chr1g0315001 RchiOBHm_Chr1g0315411 RchiOBHm_Chr1g0317951 RchiOBHm_Chr1g0319741 RchiOBHm_Chr1g0319841 RchiOBHm_Chr1g0319911 RchiOBHm_Chr1g0319991 RchiOBHm_Chr1g0320001 RchiOBHm_Chr1g0320021 RchiOBHm_Chr1g0320081 RchiOBHm_Chr1g0320111 RchiOBHm_Chr1g0320131 RchiOBHm_Chr1g0320161 RchiOBHm_Chr1g0320171 RchiOBHm_Chr1g0320241 RchiOBHm_Chr1g0320281 RchiOBHm_Chr1g0320411 RchiOBHm_Chr1g0320461 RchiOBHm_Chr1g0320551 RchiOBHm_Chr1g0320581 RchiOBHm_Chr1g0320661 RchiOBHm_Chr1g0320891 RchiOBHm_Chr1g0320971 RchiOBHm_Chr1g0321021 RchiOBHm_Chr1g0321031 RchiOBHm_Chr1g0321091 RchiOBHm_Chr1g0321351 RchiOBHm_Chr1g0321481 RchiOBHm_Chr1g0321491 RchiOBHm_Chr1g0327521 RchiOBHm_Chr1g0328061 RchiOBHm_Chr1g0334991 RchiOBHm_Chr1g0373781 RchiOBHm_Chr1g0373891 RchiOBHm_Chr1g0374841 RchiOBHm_Chr2g0131111 RchiOBHm_Chr2g0131121 RchiOBHm_Chr4g0408901 RchiOBHm_Chr5g0041691 RchiOBHm_Chr7g0237021
rosa_laevigata RLG00000019168 RLG00000030456 RLG00000030460 RLG00000030571
rosa_multiflora Rmu_co7963468.1_g000001 Rmu_co7991248.1_g000001 Rmu_co8195256.1_g000001 Rmu_co8312199.1_g000001 Rmu_co8349215.1_g000001 Rmu_co8351041.1_g000001 Rmu_co8422719.1_g000001 Rmu_co8450711.1_g000001 Rmu_co8465555.1_g000001 Rmu_co8489965.1_g000001 Rmu_sc0000087.1_g000014 Rmu_sc0000272.1_g000015 Rmu_sc0000724.1_g000006 Rmu_sc0000724.1_g000021 Rmu_sc0000724.1_g000022 Rmu_sc0000861.1_g000024 Rmu_sc0001049.1_g000006 Rmu_sc0001049.1_g000007 Rmu_sc0001512.1_g000001 Rmu_sc0002022.1_g000004 Rmu_sc0002063.1_g000011 Rmu_sc0002131.1_g000024 Rmu_sc0002337.1_g000012 Rmu_sc0002341.1_g000005 Rmu_sc0002539.1_g000117 Rmu_sc0002745.1_g000005 Rmu_sc0002745.1_g000006 Rmu_sc0003145.1_g000002 Rmu_sc0003199.1_g000007 Rmu_sc0003270.1_g000039 Rmu_sc0003270.1_g000040 Rmu_sc0003423.1_g000001 Rmu_sc0003423.1_g000002 Rmu_sc0003629.1_g000067 Rmu_sc0004039.1_g000002 Rmu_sc0004555.1_g000001 Rmu_sc0004555.1_g000005 Rmu_sc0004555.1_g000006 Rmu_sc0004947.1_g000025 Rmu_sc0004947.1_g000026 Rmu_sc0005255.1_g000025 Rmu_sc0007977.1_g000016 Rmu_sc0008752.1_g000005 Rmu_sc0009236.1_g000004 Rmu_sc0009236.1_g000008 Rmu_sc0009236.1_g000009 Rmu_sc0009236.1_g000010 Rmu_sc0011424.1_g000036 Rmu_sc0013413.1_g000001 Rmu_sc0013735.1_g000002 Rmu_sc0015304.1_g000002 Rmu_sc0015304.1_g000003 Rmu_sc0015585.1_g000001 Rmu_sc0018410.1_g000001 Rmu_sc0022723.1_g000001 Rmu_sc0022723.1_g000002 Rmu_sc0022724.1_g000001 Rmu_sc0023430.1_g000001 Rmu_sc0026053.1_g000001 Rmu_sc0026429.1_g000002 Rmu_sc0026647.1_g000001 Rmu_sc0031359.1_g000001 Rmu_ssc0000042.1_g000040 Rmu_ssc0000081.1_g000001 Rmu_ssc0000300.1_g000011
rosa_roxburghii Rroxscaffold_160G00433620 Rroxscaffold_160G00433990 Rroxscaffold_1G00038820 Rroxscaffold_2G00113190 Rroxscaffold_4G00283240 Rroxscaffold_4G00283930 Rroxscaffold_4G00284010 Rroxscaffold_4G00322600 Rroxscaffold_4G00327710 Rroxscaffold_4G00328100 Rroxscaffold_4G00328130 Rroxscaffold_4G00331590 Rroxscaffold_5G00353280
rosa_rugosa Rorug01G0004200 Rorug01G0018800 Rorug01G0018900 Rorug01G0029900 Rorug01G0030000 Rorug01G0030000 Rorug01G0030000 Rorug01G0030200 Rorug01G0030300 Rorug01G0030800 Rorug01G0032400 Rorug01G0032900 Rorug01G0055800 Rorug01G0067600 Rorug01G0067700 Rorug01G0067800 Rorug01G0067900 Rorug01G0068000 Rorug01G0379500 Rorug01G0379600 Rorug01G0379600 Rorug01G0385200 Rorug01G0385300 Rorug02G0295100 Rorug04G0088500 Rorug04G0088600 Rorug05G0194900 Rorug07G0301400
rosa_samantha Rh1AG014800 Rh1AG015200 Rh1AG030500 Rh1AG041800 Rh1AG042300 Rh1AG042700 Rh1AG042800 Rh1AG042900 Rh1AG045000 Rh1AG085100 Rh1AG085200 Rh1AG388600 Rh1AG396700 Rh1AG396900 Rh1BG007300 Rh1BG039200 Rh1BG039600 Rh1BG042800 Rh1BG067300 Rh1BG109700 Rh1BG109900 Rh1BG354000 Rh1CG043800 Rh1CG044400 Rh1DG008600 Rh1DG022900 Rh1DG023400 Rh1DG023600 Rh1DG023900 Rh1DG024100 Rh1DG024400 Rh1DG024500 Rh1DG025500 Rh1DG025700 Rh1DG026500 Rh1DG026800 Rh1DG038900 Rh1DG048800 Rh1DG049300 Rh1DG051700 Rh1DG052000 Rh1DG146200 Rh1DG383500 Rh2BG354900 Rh2CG333600 Rh4BG149600 Rh4BG149700 Rh4CG160600
rosa_wichuraiana Rw0G001100 Rw0G001130 Rw0G001180 Rw0G012580 Rw1G003480 Rw1G003540 Rw1G003600 Rw1G003640 Rw1G003670 Rw1G003750 Rw1G003940 Rw1G006650 Rw1G034550 Rw1G034560 Rw1G034650 Rw1G034660 Rw1G035170 Rw1G035190 Rw1G037060 Rw2G028210 Rw4G012540 Rw5G026370 Rw7G037900

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 2703
Acc16I TGCGCA 1 cut(s) 1270
Acc36I ACCTGC 1 cut(s) 2348
Acc65I GGTACC 1 cut(s) 3076
AccB1I GGYRCC 1 cut(s) 3076
AccI GTMKAC 2 cut(s) 1143, 3436
AccII CGCG 5 cut(s) 928, 1447, 1543, 1957, 4146
AccIII TCCGGA 1 cut(s) 3151
AciI CCGC 7 cut(s) 146, 161, 882, 928, 1343, 1633, 3829
AclWI GGATC 2 cut(s) 2059, 3839
AcoI YGGCCR 2 cut(s) 3348, 3608
AcsI RAATTY 9 cut(s) 338, 519, 571, 1243, 1292, 1498, 1951, 2300, 3883
AcuI CTGAAG 3 cut(s) 1638, 2642, 3533
AcyI GRCGYC 1 cut(s) 82
AdeI CACNNNGTG 1 cut(s) 3878
AfaI GTAC 5 cut(s) 74, 556, 598, 1960, 3078
AfiI CCNNNNNNNGG 8 cut(s) 494, 709, 1991, 2390, 2614, 3073, 3158, 4043
AflII CTTAAG 1 cut(s) 86
AflIII ACRYGT 3 cut(s) 631, 2241, 2891
AjiI CACGTC 1 cut(s) 741
AjnI CCWGG 4 cut(s) 1576, 3401, 3874, 4163
AjuI GAANNNNNNNTTGG 4 cut(s) 399, 431, 3918, 3950
AloI GAACNNNNNNTCC 1 cut(s) 29
Alw21I GWGCWC 3 cut(s) 771, 1020, 2274
Alw26I GTCTC 4 cut(s) 951, 2313, 2492, 3660
Alw44I GTGCAC 1 cut(s) 1016
AlwI GGATC 2 cut(s) 2059, 3839
AlwNI CAGNNNCTG 1 cut(s) 2604
Aor13HI TCCGGA 1 cut(s) 3151
AoxI GGCC 7 cut(s) 485, 1381, 3348, 3391, 3608, 4045, 4121
ApaLI GTGCAC 1 cut(s) 1016
ApeKI GCWGC 5 cut(s) 37, 1103, 1490, 1765, 3904
ApoI RAATTY 9 cut(s) 338, 519, 571, 1243, 1292, 1498, 1951, 2300, 3883
Asp700I GAANNNNTTC 1 cut(s) 3492
Asp718I GGTACC 1 cut(s) 3076
AspLEI GCGC 2 cut(s) 1271, 3781
AspS9I GGNCC 4 cut(s) 485, 1381, 4045, 4122
AsuII TTCGAA 3 cut(s) 1241, 2820, 3887
AxyI CCTNAGG 1 cut(s) 3531
BaeGI GKGCMC 1 cut(s) 1020
BalI TGGCCA 2 cut(s) 3350, 3610
BanI GGYRCC 1 cut(s) 3076
BanII GRGCYC 4 cut(s) 771, 2274, 3409, 4163
BbsI GAAGAC 4 cut(s) 243, 2190, 2964, 3167
Bbv12I GWGCWC 3 cut(s) 771, 1020, 2274
BbvCI CCTCAGC 1 cut(s) 1986
BbvI GCAGC 5 cut(s) 24, 1090, 1477, 1752, 3891
BceAI ACGGC 3 cut(s) 1081, 1368, 2467
BciT130I CCWGG 4 cut(s) 1578, 3403, 3876, 4165
BclI TGATCA 2 cut(s) 1311, 1672
BcoDI GTCTC 4 cut(s) 951, 2313, 2492, 3660
BfmI CTRYAG 2 cut(s) 720, 1491
BfoI RGCGCY 1 cut(s) 3782
BfrI CTTAAG 1 cut(s) 86
BfuAI ACCTGC 1 cut(s) 2348
BglII AGATCT 1 cut(s) 3914
BisI GCNGC 5 cut(s) 38, 1104, 1491, 1766, 3905
BlsI GCNGC 5 cut(s) 39, 1105, 1492, 1767, 3906
BmcAI AGTACT 1 cut(s) 74
Bme1390I CCNGG 4 cut(s) 1578, 3403, 3876, 4165
BmgBI CACGTC 1 cut(s) 741
BmgT120I GGNCC 4 cut(s) 485, 1381, 4045, 4122
BmiI GGNNCC 3 cut(s) 3078, 3464, 4162
BmrFI CCNGG 4 cut(s) 1578, 3403, 3876, 4165
BoxI GACNNNNGTC 3 cut(s) 1887, 2757, 3477
BpiI GAAGAC 4 cut(s) 243, 2190, 2964, 3167
BpmI CTGGAG 2 cut(s) 131, 3464
Bpu10I CCTNAGC 1 cut(s) 1986
Bpu14I TTCGAA 3 cut(s) 1241, 2820, 3887
BpuEI CTTGAG 3 cut(s) 3359, 3777, 4013
Bsa29I ATCGAT 1 cut(s) 1894
BsaBI GATNNNNATC 2 cut(s) 1199, 1677
BsaHI GRCGYC 1 cut(s) 82
BsaI GGTCTC 2 cut(s) 2313, 2492
BsaJI CCNNGG 3 cut(s) 449, 3401, 3402
BsaWI WCCGGW 3 cut(s) 31, 2629, 3151
BsaXI ACNNNNNCTCC 3 cut(s) 27, 971, 1001
Bsc4I CCNNNNNNNGG 8 cut(s) 494, 709, 1991, 2390, 2614, 3073, 3158, 4043
Bse118I RCCGGY 1 cut(s) 4119
Bse1I ACTGG 3 cut(s) 2762, 2878, 3027
Bse21I CCTNAGG 1 cut(s) 3531
Bse3DI GCAATG 3 cut(s) 872, 2015, 2096
Bse8I GATNNNNATC 2 cut(s) 1199, 1677
BseAI TCCGGA 1 cut(s) 3151
BseBI CCWGG 4 cut(s) 1578, 3403, 3876, 4165
BseCI ATCGAT 1 cut(s) 1894
BseDI CCNNGG 3 cut(s) 449, 3401, 3402
BseJI GATNNNNATC 2 cut(s) 1199, 1677
BseLI CCNNNNNNNGG 8 cut(s) 494, 709, 1991, 2390, 2614, 3073, 3158, 4043
BseMI GCAATG 3 cut(s) 872, 2015, 2096
BseMII CTCAG 8 cut(s) 226, 372, 782, 2000, 3522, 3653, 3672, 3953
BseNI ACTGG 3 cut(s) 2762, 2878, 3027
BseRI GAGGAG 5 cut(s) 179, 1974, 2897, 3314, 4055
BseSI GKGCMC 1 cut(s) 1020
BseXI GCAGC 5 cut(s) 24, 1090, 1477, 1752, 3891
BseYI CCCAGC 1 cut(s) 2141
Bsh1236I CGCG 5 cut(s) 928, 1447, 1543, 1957, 4146
BshFI GGCC 7 cut(s) 487, 1383, 3350, 3393, 3610, 4047, 4123
BshNI GGYRCC 1 cut(s) 3076
BshVI ATCGAT 1 cut(s) 1894
BsiHKAI GWGCWC 3 cut(s) 771, 1020, 2274
BsiSI CCGG 6 cut(s) 32, 1353, 2292, 2630, 3152, 4120
BslFI GGGAC 4 cut(s) 2107, 2158, 3549, 4094
BslI CCNNNNNNNGG 8 cut(s) 494, 709, 1991, 2390, 2614, 3073, 3158, 4043
BsmAI GTCTC 4 cut(s) 951, 2313, 2492, 3660
BsmFI GGGAC 4 cut(s) 2107, 2158, 3549, 4094
BsmI GAATGC 2 cut(s) 23, 2401
BsnI GGCC 7 cut(s) 487, 1383, 3350, 3393, 3610, 4047, 4123
Bso31I GGTCTC 2 cut(s) 2313, 2492
Bsp119I TTCGAA 3 cut(s) 1241, 2820, 3887
Bsp1286I GDGCHC 5 cut(s) 771, 1020, 2274, 3409, 4163
Bsp13I TCCGGA 1 cut(s) 3151
Bsp19I CCATGG 1 cut(s) 449
Bsp68I TCGCGA 2 cut(s) 1447, 1543
BspACI CCGC 7 cut(s) 146, 161, 882, 928, 1343, 1633, 3829
BspANI GGCC 7 cut(s) 487, 1383, 3350, 3393, 3610, 4047, 4123
BspCNI CTCAG 8 cut(s) 225, 371, 783, 1999, 3523, 3654, 3673, 3954
BspDI ATCGAT 1 cut(s) 1894
BspEI TCCGGA 1 cut(s) 3151
BspFNI CGCG 5 cut(s) 928, 1447, 1543, 1957, 4146
BspHI TCATGA 3 cut(s) 1947, 2713, 2835
BspLI GGNNCC 3 cut(s) 3078, 3464, 4162
BspMAI CTGCAG 2 cut(s) 724, 1495
BspMI ACCTGC 1 cut(s) 2348
BspPI GGATC 2 cut(s) 2059, 3839
BspT104I TTCGAA 3 cut(s) 1241, 2820, 3887
BspT107I GGYRCC 1 cut(s) 3076
BspTI CTTAAG 1 cut(s) 86
BspTNI GGTCTC 2 cut(s) 2313, 2492
BsrDI GCAATG 3 cut(s) 872, 2015, 2096
BsrFI RCCGGY 1 cut(s) 4119
BsrI ACTGG 3 cut(s) 2762, 2878, 3027
BssAI RCCGGY 1 cut(s) 4119
BssECI CCNNGG 3 cut(s) 449, 3401, 3402
BssNI GRCGYC 1 cut(s) 82
BssT1I CCWWGG 1 cut(s) 449
Bst2UI CCWGG 4 cut(s) 1578, 3403, 3876, 4165
Bst6I CTCTTC 2 cut(s) 3111, 4092
BstACI GRCGYC 1 cut(s) 82
BstAFI CTTAAG 1 cut(s) 86
BstAPI GCANNNNNTGC 1 cut(s) 3007
BstBI TTCGAA 3 cut(s) 1241, 2820, 3887
BstC8I GCNNGC 4 cut(s) 808, 2152, 2545, 4049
BstDSI CCRYGG 1 cut(s) 449
BstENI CCTNNNNNAGG 1 cut(s) 3071
BstFNI CGCG 5 cut(s) 928, 1447, 1543, 1957, 4146
BstH2I RGCGCY 1 cut(s) 3782
BstHHI GCGC 2 cut(s) 1271, 3781
BstMAI GTCTC 4 cut(s) 951, 2313, 2492, 3660
BstMWI GCNNNNNNNGC 7 cut(s) 143, 941, 1487, 1987, 2147, 2160, 3007
BstNI CCWGG 4 cut(s) 1578, 3403, 3876, 4165
BstNSI RCATGY 4 cut(s) 635, 852, 2245, 2895
BstPAI GACNNNNGTC 3 cut(s) 1887, 2757, 3477
BstSCI CCNGG 4 cut(s) 1576, 3401, 3874, 4163
BstSFI CTRYAG 2 cut(s) 720, 1491
BstSLI GKGCMC 1 cut(s) 1020
BstUI CGCG 5 cut(s) 928, 1447, 1543, 1957, 4146
BstV1I GCAGC 5 cut(s) 24, 1090, 1477, 1752, 3891
BstV2I GAAGAC 4 cut(s) 243, 2190, 2964, 3167
BstX2I RGATCY 3 cut(s) 3831, 3914, 4167
BstXI CCANNNNNNTGG 1 cut(s) 675
BstYI RGATCY 3 cut(s) 3831, 3914, 4167
Bsu15I ATCGAT 1 cut(s) 1894
Bsu36I CCTNAGG 1 cut(s) 3531
BsuRI GGCC 7 cut(s) 487, 1383, 3350, 3393, 3610, 4047, 4123
BsuTUI ATCGAT 1 cut(s) 1894
BtgI CCRYGG 1 cut(s) 449
BtgZI GCGATG 1 cut(s) 1524
BtrI CACGTC 1 cut(s) 741
BtsI GCAGTG 2 cut(s) 195, 2445
BtsIMutI CAGTG 5 cut(s) 195, 375, 1818, 2445, 3678
BtuMI TCGCGA 2 cut(s) 1447, 1543
BveI ACCTGC 1 cut(s) 2348
Cac8I GCNNGC 4 cut(s) 808, 2152, 2545, 4049
CaiI CAGNNNCTG 1 cut(s) 2604
CciI TCATGA 3 cut(s) 1947, 2713, 2835
CfoI GCGC 2 cut(s) 1271, 3781
Cfr10I RCCGGY 1 cut(s) 4119
Cfr13I GGNCC 4 cut(s) 485, 1381, 4045, 4122
ClaI ATCGAT 1 cut(s) 1894
CseI GACGC 5 cut(s) 90, 312, 1928, 2147, 4135
CsiI ACCWGGT 1 cut(s) 3874
Csp6I GTAC 5 cut(s) 73, 555, 597, 1959, 3077
CviQI GTAC 5 cut(s) 73, 555, 597, 1959, 3077
DraIII CACNNNGTG 1 cut(s) 3878
EaeI YGGCCR 2 cut(s) 3348, 3608
Eam1104I CTCTTC 2 cut(s) 3111, 4092
EarI CTCTTC 2 cut(s) 3111, 4092
EciI GGCGGA 1 cut(s) 871
Ecl136II GAGCTC 2 cut(s) 769, 2272
Eco130I CCWWGG 1 cut(s) 449
Eco24I GRGCYC 4 cut(s) 771, 2274, 3409, 4163
Eco31I GGTCTC 2 cut(s) 2313, 2492
Eco53kI GAGCTC 2 cut(s) 769, 2272
Eco57I CTGAAG 3 cut(s) 1638, 2642, 3533
Eco81I CCTNAGG 1 cut(s) 3531
EcoICRI GAGCTC 2 cut(s) 769, 2272
EcoNI CCTNNNNNAGG 1 cut(s) 3071
EcoO109I RGGNCCY 1 cut(s) 4045
EcoRI GAATTC 2 cut(s) 1951, 3883
EcoRII CCWGG 4 cut(s) 1576, 3401, 3874, 4163
EcoT14I CCWWGG 1 cut(s) 449
EcoT22I ATGCAT 1 cut(s) 1461
EcoT38I GRGCYC 4 cut(s) 771, 2274, 3409, 4163
ErhI CCWWGG 1 cut(s) 449
FalI AAGNNNNNCTT 2 cut(s) 135, 167
FaqI GGGAC 4 cut(s) 2107, 2158, 3549, 4094
FauI CCCGC 1 cut(s) 921
FbaI TGATCA 2 cut(s) 1311, 1672
FblI GTMKAC 2 cut(s) 1143, 3436
Fnu4HI GCNGC 5 cut(s) 38, 1104, 1491, 1766, 3905
FriOI GRGCYC 4 cut(s) 771, 2274, 3409, 4163
Fsp4HI GCNGC 5 cut(s) 38, 1104, 1491, 1766, 3905
FspI TGCGCA 1 cut(s) 1270
GlaI GCGC 2 cut(s) 1270, 3780
GluI GCNGC 5 cut(s) 38, 1104, 1491, 1766, 3905
GsaI CCCAGC 1 cut(s) 2145
GsuI CTGGAG 2 cut(s) 131, 3464
HaeII RGCGCY 1 cut(s) 3782
HaeIII GGCC 7 cut(s) 487, 1383, 3350, 3393, 3610, 4047, 4123
HapII CCGG 6 cut(s) 32, 1353, 2292, 2630, 3152, 4120
HgaI GACGC 5 cut(s) 90, 312, 1928, 2147, 4135
HhaI GCGC 2 cut(s) 1271, 3781
Hin1I GRCGYC 1 cut(s) 82
Hin6I GCGC 2 cut(s) 1269, 3779
HinP1I GCGC 2 cut(s) 1269, 3779
HincII GTYRAC 4 cut(s) 97, 132, 2790, 3482
HindII GTYRAC 4 cut(s) 97, 132, 2790, 3482
HindIII AAGCTT 5 cut(s) 2490, 2588, 2636, 2842, 3032
HpaII CCGG 6 cut(s) 32, 1353, 2292, 2630, 3152, 4120
Hpy166II GTNNAC 9 cut(s) 97, 132, 1018, 1144, 2627, 2749, 2790, 3437, 3482
Hpy8I GTNNAC 9 cut(s) 97, 132, 1018, 1144, 2627, 2749, 2790, 3437, 3482
Hpy99I CGWCG 1 cut(s) 1548
HpyCH4IV ACGT 5 cut(s) 740, 1129, 1483, 1546, 3040
HpyF10VI GCNNNNNNNGC 7 cut(s) 143, 941, 1487, 1987, 2147, 2160, 3007
HpySE526I ACGT 5 cut(s) 740, 1129, 1483, 1546, 3040
Hsp92I GRCGYC 1 cut(s) 82
HspAI GCGC 2 cut(s) 1269, 3779
Kpn2I TCCGGA 1 cut(s) 3151
KpnI GGTACC 1 cut(s) 3080
Ksp22I TGATCA 2 cut(s) 1311, 1672
LmnI GCTCC 4 cut(s) 896, 2884, 3912, 4166
Lsp1109I GCAGC 5 cut(s) 24, 1090, 1477, 1752, 3891
MabI ACCWGGT 1 cut(s) 3874
MaeII ACGT 5 cut(s) 740, 1129, 1483, 1546, 3040
MfeI CAATTG 6 cut(s) 138, 1217, 1307, 1776, 3011, 3933
MflI RGATCY 3 cut(s) 3831, 3914, 4167
MhlI GDGCHC 5 cut(s) 771, 1020, 2274, 3409, 4163
MlsI TGGCCA 2 cut(s) 3350, 3610
MluNI TGGCCA 2 cut(s) 3350, 3610
MlyI GAGTC 7 cut(s) 989, 1529, 1835, 3145, 3531, 3801, 4006
MmeI TCCRAC 4 cut(s) 332, 874, 983, 1212
Mox20I TGGCCA 2 cut(s) 3350, 3610
Mph1103I ATGCAT 1 cut(s) 1461
MroI TCCGGA 1 cut(s) 3151
MroXI GAANNNNTTC 1 cut(s) 3492
MscI TGGCCA 2 cut(s) 3350, 3610
MslI CAYNNNNRTG 1 cut(s) 1916
Msp20I TGGCCA 2 cut(s) 3350, 3610
MspA1I CMGCKG 1 cut(s) 3442
MspCI CTTAAG 1 cut(s) 86
MspI CCGG 6 cut(s) 32, 1353, 2292, 2630, 3152, 4120
MspR9I CCNGG 4 cut(s) 1578, 3403, 3876, 4165
MunI CAATTG 6 cut(s) 138, 1217, 1307, 1776, 3011, 3933
Mva1269I GAATGC 2 cut(s) 23, 2401
MvaI CCWGG 4 cut(s) 1578, 3403, 3876, 4165
MvnI CGCG 5 cut(s) 928, 1447, 1543, 1957, 4146
MwoI GCNNNNNNNGC 7 cut(s) 143, 941, 1487, 1987, 2147, 2160, 3007
NcoI CCATGG 1 cut(s) 449
NlaIV GGNNCC 3 cut(s) 3078, 3464, 4162
NmeAIII GCCGAG 1 cut(s) 3618
NmuCI GTSAC 4 cut(s) 712, 736, 1385, 1940
NruI TCGCGA 2 cut(s) 1447, 1543
NsbI TGCGCA 1 cut(s) 1270
NsiI ATGCAT 1 cut(s) 1461
NspI RCATGY 4 cut(s) 635, 852, 2245, 2895
NspV TTCGAA 3 cut(s) 1241, 2820, 3887
PagI TCATGA 3 cut(s) 1947, 2713, 2835
PasI CCCWGGG 1 cut(s) 3402
PciI ACATGT 3 cut(s) 631, 2241, 2891
PcsI WCGNNNNNNNCGW 1 cut(s) 932
PctI GAATGC 2 cut(s) 23, 2401
PdmI GAANNNNTTC 1 cut(s) 3492
PfoI TCCNGGA 1 cut(s) 4163
PkrI GCNGC 5 cut(s) 39, 1105, 1492, 1767, 3906
PleI GAGTC 7 cut(s) 988, 1529, 1835, 3144, 3531, 3801, 4005
PpsI GAGTC 7 cut(s) 988, 1529, 1835, 3144, 3531, 3801, 4005
PscI ACATGT 3 cut(s) 631, 2241, 2891
PshAI GACNNNNGTC 3 cut(s) 1887, 2757, 3477
PsiI TTATAA 1 cut(s) 2703
Psp124BI GAGCTC 2 cut(s) 771, 2274
Psp6I CCWGG 4 cut(s) 1576, 3401, 3874, 4163
PspFI CCCAGC 1 cut(s) 2141
PspGI CCWGG 4 cut(s) 1576, 3401, 3874, 4163
PspN4I GGNNCC 3 cut(s) 3078, 3464, 4162
PspPI GGNCC 4 cut(s) 485, 1381, 4045, 4122
PsrI GAACNNNNNNTAC 2 cut(s) 2406, 2438
PstI CTGCAG 2 cut(s) 724, 1495
PstNI CAGNNNCTG 1 cut(s) 2604
PsuI RGATCY 3 cut(s) 3831, 3914, 4167
PvuII CAGCTG 1 cut(s) 3442
RruI TCGCGA 2 cut(s) 1447, 1543
RsaI GTAC 5 cut(s) 74, 556, 598, 1960, 3078
RsaNI GTAC 5 cut(s) 73, 555, 597, 1959, 3077
RseI CAYNNNNRTG 1 cut(s) 1916
SacI GAGCTC 2 cut(s) 771, 2274
SatI GCNGC 5 cut(s) 38, 1104, 1491, 1766, 3905
Sau96I GGNCC 4 cut(s) 485, 1381, 4045, 4122
ScaI AGTACT 1 cut(s) 74
SchI GAGTC 7 cut(s) 989, 1529, 1835, 3145, 3531, 3801, 4006
ScrFI CCNGG 4 cut(s) 1578, 3403, 3876, 4165
SduI GDGCHC 5 cut(s) 771, 1020, 2274, 3409, 4163
SexAI ACCWGGT 1 cut(s) 3874
SfcI CTRYAG 2 cut(s) 720, 1491
SfuI TTCGAA 3 cut(s) 1241, 2820, 3887
SmiMI CAYNNNNRTG 1 cut(s) 1916
SmlI CTYRAG 4 cut(s) 86, 3338, 3792, 3992
SmoI CTYRAG 4 cut(s) 86, 3338, 3792, 3992
SsiI CCGC 7 cut(s) 146, 161, 882, 928, 1343, 1633, 3829
SspI AATATT 1 cut(s) 1161
SstI GAGCTC 2 cut(s) 771, 2274
StyD4I CCNGG 4 cut(s) 1576, 3401, 3874, 4163
StyI CCWWGG 1 cut(s) 449
TaiI ACGT 5 cut(s) 743, 1132, 1486, 1549, 3043
TaqII GACCGA 1 cut(s) 1775
TatI WGTACW 1 cut(s) 72
TscAI CASTG 5 cut(s) 195, 382, 1825, 2445, 3685
TseFI GTSAC 4 cut(s) 712, 736, 1385, 1940
TseI GCWGC 5 cut(s) 37, 1103, 1490, 1765, 3904
Tsp45I GTSAC 4 cut(s) 712, 736, 1385, 1940
TspGWI ACGGA 1 cut(s) 1104
TspRI CASTG 5 cut(s) 195, 382, 1825, 2445, 3685
Vha464I CTTAAG 1 cut(s) 86
VneI GTGCAC 1 cut(s) 1016
XagI CCTNNNNNAGG 1 cut(s) 3071
XapI RAATTY 9 cut(s) 338, 519, 571, 1243, 1292, 1498, 1951, 2300, 3883
XbaI TCTAGA 2 cut(s) 829, 1508
XceI RCATGY 4 cut(s) 635, 852, 2245, 2895
XmiI GTMKAC 2 cut(s) 1143, 3436
XmnI GAANNNNTTC 1 cut(s) 3492
ZrmI AGTACT 1 cut(s) 74
Zsp2I ATGCAT 1 cut(s) 1461
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.