FvH4_7g02400

disease resistance

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb7
Physical Location & Seq
Reverse (-)
2686854 .. 2691479
4626 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_7g02400.t1

Sequence Viewer

Length: 2190 bp
ATGCCAGGAGTCGGGAAGACAACACTAGTAGCACATGTCTTCTTTTCTGAAGCTATTGAACAGTTTAACCCAAAGGTTTGGGTATCTGTGTCTCATAACTTCAATCTTGAAAGAGTGATGAGAGCTATTTGTAGGAAAGTCACATCCCGGCCATGTGACCAAGATGATTTCAGTGAAGTTCAAGATGATTTGAAAAGGGCAATAGCAGGTCAGAAACTTTTAGTTGTTCTAGATGATGTCTGGAGCACATGTGACTACGAGTCATGGACAATATTGCAGTCTCACTTCCATGTTGGAGCACCAGGAAGTAAGATACTCATCACAACACGTGAAGAAAAAGTTGCAAGATTGATTGGAGCCACTGAGGTTTACAATTTGAAGGTTCTTTCAGATGAAGAATGTCTCCAAGTATTTATGCAACATATTAACAATCACAGACCACCAGATTTTGATGCAGTCCTTGCCAATAAAATTGTCGGAAAGTGCAGTGGACTTCCACTGGCGGCAAAAACTCTTGGTGGTATTTTACGTTGTAAAGTAGCTGACAAATGGGAAGGCGTATTGGATGACAAACTGTGGAGTATATCAAATAACGAGAGTAACATACCCTCGGTTCTGAAGCTGATTTATCAATCCTATCATTATCTTCCTTCAGCTATAAAGAGGTGCTTTGCATATTGCTCAATACTTCCCAATAACTATAAATTTGGGAAAAAGCAACTAATTCTTCTATGGATGGCAGAGGGTTTTATTCCACAGCCAGAAGGAAGTAACCAGATGGAAGATATTGCTGGTGACTATTTTGAGGACCTGTTATCTAGGTCATTATTTCAGAAGTCAAGCGAAAGTGGTTCACTTTATGTAATGCATGATCTTGTTGGTGATTTGGCACGGTGGGCGTCAGGAGATACATATTTCAGATTGGATGATAAAGTGGATGGCAAATGTTCTCCAAAGACTCGTCATTCTTCTTACATTTCTGGCAAGTATGATGGAATTACCAAATTTGAAAAGGCATTCTCTGGAGCGAAGAGCCTGCGAACGTTCCTACCATTTTCAATTTCACATGGTCATGACAACTATCTAACTTGTAAGGTTACTTTTGATATGTTGCCAAAGTTGGAGTGTTTACGAGTACTTTCTTTCAGTGGCTATCAAATAACTCTGTTGCCGGATTCAATTGGTCATCTGAAGCATCTGAGGTACCTTGATCTTTCTCACACACTTATAATGAGTTTGCCTGAATCAACAACCACCCTGTACAACTTGCAGACATTGATATTAGAAAATTGTTCTCAGTTGAAGGCACTGCCAGCAAAACTGAAAAATTTAACCAGGTTGCGTCATCTGAACAACTCCAATGTGCCTTCATTGGAAGGAATGCCTCCTCAGCTATGTCAATTGACTAATCTCCAAGCGTTGTCTGTTTTTGTTGTGGGCAAAGGAAATGTGTCGCGTGTAGGAGAGATAGGGCCTCTACTGCTTCGTTGGACATTGTGCCTCAAAAGATTGGAGAATGTGATTGATGTTGAGGATGCAACAAGAGCAAACTTATTGAGCAAGGAAAGACTTGATACACTACAACTAGAATGGAGTGGCACTGATGGGAAGGAATCAGAAGTTCTTGATGTGCTAAAACCACACATAAACCTTAAAGAGCTCATCATTGAGGGTTATAACGGTGTGGAATTTCCAACATGGATTCGACATCCTCTTTTCTCTAAAATGACCCTTGTGGTGTTAGAGAATTGTAAAGGCTGTCGCTTCCTGCCAGCACTTGGCCAATTACCTTCTCTGAAAGAACTCTTTATAAAAGGAATGTCTGGTGTTGATAGTGTTGGTCCTGAGTTTTATGGGAAGTCTGAGGGCTTGCCTTTCCCAGTGTTAGAAACTCTTGAGTTCAAGGACATGGAAGATTGGAAGGAGTGGTTGCTTTGGCAAGGAAGTGGAGCTTTCCCTTGTCTGAAAATGCTTTCCATCTCCGCATGCCCCAAGCTGAGAGGTAGCTTACCTGAGAATATTCATGTATTATCAAAGCTTGTGATTGATGATTGTCAGCGGTTGGTTGTTTCAACTACCAATTATGAACTGATTCGCGAGTTAAACATATGTGGTTGTAAATGGGCAGTGGATACAAGTGGGGTTCAGCTAACGCATGGAACTTTCATGTATTTCCGAGTTCAGATTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

730

Amino Acids

82.16

Weight (kDa)

6.83

Isoelectric Point (pI)

42.59

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
NB-ARC PF00931 1 - 143 1e-26 NB-ARC domain
WHD_DRP PF23559 229 - 297 2.9e-23 Disease resistance protein Winged helix domain
LRR_14 PF23598 370 - 662 5.9e-26 Leucine-rich repeat region
LRR_R13L1-DRL21 PF25019 495 - 607 2.2e-31 R13L1/DRL21 LRRs
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000070)

Species Orthologous Gene IDs
fragaria_vesca FvH4_7g00360 FvH4_7g00850 FvH4_7g02400 FvH4_7g02430 FvH4_7g02450 FvH4_7g25671 FvH4_7g25680 FvH4_7g25683 FvH4_7g26980 FvH4_7g27330 FvH4_7g27355 FvH4_7g27610 FvH4_7g27642 FvH4_7g27890 FvH4_7g27891 FvH4_7g27891 FvH4_7g27891 FvH4_7g28110 FvH4_7g28390
malus_domestica MD00G1070800.v1.1 MD00G1168000.v1.1 MD00G1168300.v1.1 MD00G1168700.v1.1 MD02G1293100.v1.1 MD02G1293200.v1.1 MD02G1314300.v1.1 MD03G1009000.v1.1 MD03G1009400.v1.1 MD03G1042300.v1.1 MD03G1042400.v1.1 MD07G1033600.v1.1 MD07G1033700.v1.1 MD07G1033900.v1.1 MD11G1011400.v1.1 MD11G1011700.v1.1 MD11G1029800.v1.1 MD11G1029900.v1.1 MD11G1030300.v1.1 MD11G1030400.v1.1 MD11G1030500.v1.1 MD11G1031300.v1.1 MD11G1031600.v1.1 MD11G1032000.v1.1 MD11G1033200.v1.1 MD11G1033600.v1.1 MD11G1033800.v1.1 MD11G1033900.v1.1 MD11G1034100.v1.1 MD11G1034400.v1.1 MD11G1040600.v1.1 MD11G1041100.v1.1 MD11G1043100.v1.1 MD11G1043500.v1.1 MD11G1044500.v1.1 MD11G1045100.v1.1 MD11G1045600.v1.1
prunus_persica Prupe.2G022400_v2.0.a1 Prupe.2G022400_v2.0.a1 Prupe.2G022400_v2.0.a1 Prupe.2G022500_v2.0.a1 Prupe.2G022500_v2.0.a1 Prupe.2G022900_v2.0.a1 Prupe.2G023500_v2.0.a1 Prupe.2G023500_v2.0.a1 Prupe.2G023500_v2.0.a1 Prupe.2G023500_v2.0.a1 Prupe.2G023500_v2.0.a1 Prupe.2G023500_v2.0.a1 Prupe.2G023600_v2.0.a1 Prupe.2G028000_v2.0.a1 Prupe.2G030200_v2.0.a1 Prupe.2G067600_v2.0.a1 Prupe.8G117900_v2.0.a1
pyrus_communis pycom02g26350 pycom03g03270 pycom07g02370 pycom11g00750 pycom11g00790 pycom11g02340 pycom11g02370 pycom11g02380 pycom11g02390 pycom11g02410 pycom11g02460 pycom11g02470 pycom11g02500 pycom11g02510 pycom11g02520 pycom11g02530 pycom11g02580 pycom11g02590 pycom11g02680 pycom11g02710 pycom11g02720 pycom11g02730 pycom11g02750 pycom11g02760 pycom11g02770 pycom11g03690 pycom13g25120 pycom13g25130 pycom13g25140 pycom13g25170 pycom13g25180 pycom13g25190 pycom13g25210
rosa_chinensis RchiOBHm_Chr1g0315001 RchiOBHm_Chr1g0315411 RchiOBHm_Chr1g0317951 RchiOBHm_Chr1g0319741 RchiOBHm_Chr1g0319841 RchiOBHm_Chr1g0319911 RchiOBHm_Chr1g0319991 RchiOBHm_Chr1g0320001 RchiOBHm_Chr1g0320021 RchiOBHm_Chr1g0320081 RchiOBHm_Chr1g0320111 RchiOBHm_Chr1g0320131 RchiOBHm_Chr1g0320161 RchiOBHm_Chr1g0320171 RchiOBHm_Chr1g0320241 RchiOBHm_Chr1g0320281 RchiOBHm_Chr1g0320411 RchiOBHm_Chr1g0320461 RchiOBHm_Chr1g0320551 RchiOBHm_Chr1g0320581 RchiOBHm_Chr1g0320661 RchiOBHm_Chr1g0320891 RchiOBHm_Chr1g0320971 RchiOBHm_Chr1g0321021 RchiOBHm_Chr1g0321031 RchiOBHm_Chr1g0321091 RchiOBHm_Chr1g0321351 RchiOBHm_Chr1g0321481 RchiOBHm_Chr1g0321491 RchiOBHm_Chr1g0327521 RchiOBHm_Chr1g0328061 RchiOBHm_Chr1g0334991 RchiOBHm_Chr1g0373781 RchiOBHm_Chr1g0373891 RchiOBHm_Chr1g0374841 RchiOBHm_Chr2g0131111 RchiOBHm_Chr2g0131121 RchiOBHm_Chr4g0408901 RchiOBHm_Chr5g0041691 RchiOBHm_Chr7g0237021
rosa_laevigata RLG00000019168 RLG00000030456 RLG00000030460 RLG00000030571
rosa_multiflora Rmu_co7963468.1_g000001 Rmu_co7991248.1_g000001 Rmu_co8195256.1_g000001 Rmu_co8312199.1_g000001 Rmu_co8349215.1_g000001 Rmu_co8351041.1_g000001 Rmu_co8422719.1_g000001 Rmu_co8450711.1_g000001 Rmu_co8465555.1_g000001 Rmu_co8489965.1_g000001 Rmu_sc0000087.1_g000014 Rmu_sc0000272.1_g000015 Rmu_sc0000724.1_g000006 Rmu_sc0000724.1_g000021 Rmu_sc0000724.1_g000022 Rmu_sc0000861.1_g000024 Rmu_sc0001049.1_g000006 Rmu_sc0001049.1_g000007 Rmu_sc0001512.1_g000001 Rmu_sc0002022.1_g000004 Rmu_sc0002063.1_g000011 Rmu_sc0002131.1_g000024 Rmu_sc0002337.1_g000012 Rmu_sc0002341.1_g000005 Rmu_sc0002539.1_g000117 Rmu_sc0002745.1_g000005 Rmu_sc0002745.1_g000006 Rmu_sc0003145.1_g000002 Rmu_sc0003199.1_g000007 Rmu_sc0003270.1_g000039 Rmu_sc0003270.1_g000040 Rmu_sc0003423.1_g000001 Rmu_sc0003423.1_g000002 Rmu_sc0003629.1_g000067 Rmu_sc0004039.1_g000002 Rmu_sc0004555.1_g000001 Rmu_sc0004555.1_g000005 Rmu_sc0004555.1_g000006 Rmu_sc0004947.1_g000025 Rmu_sc0004947.1_g000026 Rmu_sc0005255.1_g000025 Rmu_sc0007977.1_g000016 Rmu_sc0008752.1_g000005 Rmu_sc0009236.1_g000004 Rmu_sc0009236.1_g000008 Rmu_sc0009236.1_g000009 Rmu_sc0009236.1_g000010 Rmu_sc0011424.1_g000036 Rmu_sc0013413.1_g000001 Rmu_sc0013735.1_g000002 Rmu_sc0015304.1_g000002 Rmu_sc0015304.1_g000003 Rmu_sc0015585.1_g000001 Rmu_sc0018410.1_g000001 Rmu_sc0022723.1_g000001 Rmu_sc0022723.1_g000002 Rmu_sc0022724.1_g000001 Rmu_sc0023430.1_g000001 Rmu_sc0026053.1_g000001 Rmu_sc0026429.1_g000002 Rmu_sc0026647.1_g000001 Rmu_sc0031359.1_g000001 Rmu_ssc0000042.1_g000040 Rmu_ssc0000081.1_g000001 Rmu_ssc0000300.1_g000011
rosa_roxburghii Rroxscaffold_160G00433620 Rroxscaffold_160G00433990 Rroxscaffold_1G00038820 Rroxscaffold_2G00113190 Rroxscaffold_4G00283240 Rroxscaffold_4G00283930 Rroxscaffold_4G00284010 Rroxscaffold_4G00322600 Rroxscaffold_4G00327710 Rroxscaffold_4G00328100 Rroxscaffold_4G00328130 Rroxscaffold_4G00331590 Rroxscaffold_5G00353280
rosa_rugosa Rorug01G0004200 Rorug01G0018800 Rorug01G0018900 Rorug01G0029900 Rorug01G0030000 Rorug01G0030000 Rorug01G0030000 Rorug01G0030200 Rorug01G0030300 Rorug01G0030800 Rorug01G0032400 Rorug01G0032900 Rorug01G0055800 Rorug01G0067600 Rorug01G0067700 Rorug01G0067800 Rorug01G0067900 Rorug01G0068000 Rorug01G0379500 Rorug01G0379600 Rorug01G0379600 Rorug01G0385200 Rorug01G0385300 Rorug02G0295100 Rorug04G0088500 Rorug04G0088600 Rorug05G0194900 Rorug07G0301400
rosa_samantha Rh1AG014800 Rh1AG015200 Rh1AG030500 Rh1AG041800 Rh1AG042300 Rh1AG042700 Rh1AG042800 Rh1AG042900 Rh1AG045000 Rh1AG085100 Rh1AG085200 Rh1AG388600 Rh1AG396700 Rh1AG396900 Rh1BG007300 Rh1BG039200 Rh1BG039600 Rh1BG042800 Rh1BG067300 Rh1BG109700 Rh1BG109900 Rh1BG354000 Rh1CG043800 Rh1CG044400 Rh1DG008600 Rh1DG022900 Rh1DG023400 Rh1DG023600 Rh1DG023900 Rh1DG024100 Rh1DG024400 Rh1DG024500 Rh1DG025500 Rh1DG025700 Rh1DG026500 Rh1DG026800 Rh1DG038900 Rh1DG048800 Rh1DG049300 Rh1DG051700 Rh1DG052000 Rh1DG146200 Rh1DG383500 Rh2BG354900 Rh2CG333600 Rh4BG149600 Rh4BG149700 Rh4CG160600
rosa_wichuraiana Rw0G001100 Rw0G001130 Rw0G001180 Rw0G012580 Rw1G003480 Rw1G003540 Rw1G003600 Rw1G003640 Rw1G003670 Rw1G003750 Rw1G003940 Rw1G006650 Rw1G034550 Rw1G034560 Rw1G034650 Rw1G034660 Rw1G035170 Rw1G035190 Rw1G037060 Rw2G028210 Rw4G012540 Rw5G026370 Rw7G037900

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 3 cut(s) 1229, 1677, 1811
Acc36I ACCTGC 1 cut(s) 197
Acc65I GGTACC 1 cut(s) 1203
AccB1I GGYRCC 1 cut(s) 1203
AccB7I CCANNNNNTGG 1 cut(s) 1778
AccII CGCG 2 cut(s) 1456, 2097
AciI CCGC 3 cut(s) 503, 1983, 2059
AclI AACGTT 1 cut(s) 1043
AcoI YGGCCR 2 cut(s) 149, 1780
AcsI RAATTY 4 cut(s) 704, 1004, 1327, 1688
AcuI CTGAAG 4 cut(s) 69, 636, 638, 1211
AcvI CACGTG 1 cut(s) 329
AcyI GRCGYC 1 cut(s) 899
AfaI GTAC 3 cut(s) 1137, 1205, 1262
AfiI CCNNNNNNNGG 2 cut(s) 11, 1778
AflIII ACRYGT 3 cut(s) 34, 248, 326
AhdI GACNNNNNGTC 1 cut(s) 259
AhlI ACTAGT 1 cut(s) 25
AjnI CCWGG 3 cut(s) 4, 301, 1334
Alw21I GWGCWC 3 cut(s) 248, 301, 1662
Alw26I GTCTC 3 cut(s) 96, 285, 407
AoxI GGCC 3 cut(s) 149, 1472, 1780
ApoI RAATTY 4 cut(s) 704, 1004, 1327, 1688
Asp700I GAANNNNTTC 1 cut(s) 2091
Asp718I GGTACC 1 cut(s) 1203
AspS9I GGNCC 3 cut(s) 808, 1472, 1841
AsuC2I CCSGG 1 cut(s) 148
AsuHPI GGTGA 2 cut(s) 806, 893
AvaII GGWCC 2 cut(s) 808, 1841
BalI TGGCCA 1 cut(s) 1782
BanI GGYRCC 1 cut(s) 1203
BanII GRGCYC 1 cut(s) 1662
BbrPI CACGTG 1 cut(s) 329
BbsI GAAGAC 2 cut(s) 23, 31
Bbv12I GWGCWC 3 cut(s) 248, 301, 1662
BbvCI CCTCAGC 1 cut(s) 1389
BccI CCATC 6 cut(s) 730, 772, 932, 986, 1598, 1985
BcgI CGANNNNNNTGC 2 cut(s) 1018, 1052
BciT130I CCWGG 3 cut(s) 6, 303, 1336
BciVI GTATCC 1 cut(s) 2125
BcnI CCSGG 1 cut(s) 148
BcoDI GTCTC 3 cut(s) 96, 285, 407
BcuI ACTAGT 1 cut(s) 25
BfaI CTAG 4 cut(s) 26, 230, 819, 1586
BfuAI ACCTGC 1 cut(s) 197
BfuI GTATCC 1 cut(s) 2125
BisI GCNGC 1 cut(s) 504
BlsI GCNGC 1 cut(s) 505
BmcAI AGTACT 1 cut(s) 1137
Bme1390I CCNGG 4 cut(s) 6, 148, 303, 1336
Bme18I GGWCC 2 cut(s) 808, 1841
BmeRI GACNNNNNGTC 1 cut(s) 259
BmgT120I GGNCC 3 cut(s) 808, 1472, 1841
BmiI GGNNCC 2 cut(s) 358, 1205
BmrFI CCNGG 4 cut(s) 6, 148, 303, 1336
BmrI ACTGGG 1 cut(s) 1874
BmsI GCATC 3 cut(s) 442, 1204, 1525
BmuI ACTGGG 1 cut(s) 1874
BpiI GAAGAC 2 cut(s) 23, 31
BpmI CTGGAG 2 cut(s) 262, 1044
Bpu10I CCTNAGC 1 cut(s) 1389
BpuEI CTTGAG 1 cut(s) 1916
BpuMI CCSGG 1 cut(s) 148
BsaAI YACGTR 1 cut(s) 329
BsaBI GATNNNNATC 1 cut(s) 317
BsaHI GRCGYC 1 cut(s) 899
BsaJI CCNNGG 1 cut(s) 609
BsaXI ACNNNNNCTCC 2 cut(s) 235, 265
Bsc4I CCNNNNNNNGG 2 cut(s) 11, 1778
Bse1I ACTGG 2 cut(s) 504, 1880
Bse8I GATNNNNATC 1 cut(s) 317
BseBI CCWGG 3 cut(s) 6, 303, 1336
BseDI CCNNGG 1 cut(s) 609
BseGI GGATG 7 cut(s) 143, 571, 741, 931, 943, 1540, 1708
BseJI GATNNNNATC 1 cut(s) 317
BseLI CCNNNNNNNGG 2 cut(s) 11, 1778
BseMII CTCAG 8 cut(s) 354, 1190, 1310, 1403, 1836, 1854, 1988, 2004
BseNI ACTGG 2 cut(s) 504, 1880
BseRI GAGGAG 1 cut(s) 1377
BsgI GTGCAG 1 cut(s) 505
Bsh1236I CGCG 2 cut(s) 1456, 2097
BshFI GGCC 3 cut(s) 151, 1474, 1782
BshNI GGYRCC 1 cut(s) 1203
BsiHKAI GWGCWC 3 cut(s) 248, 301, 1662
BsiSI CCGG 2 cut(s) 148, 1172
BslI CCNNNNNNNGG 2 cut(s) 11, 1778
BsmAI GTCTC 3 cut(s) 96, 285, 407
BsmI GAATGC 2 cut(s) 1016, 1386
BsnI GGCC 3 cut(s) 151, 1474, 1782
Bsp1286I GDGCHC 3 cut(s) 248, 301, 1662
Bsp1407I TGTACA 1 cut(s) 1260
Bsp143I GATC 2 cut(s) 871, 1210
Bsp68I TCGCGA 1 cut(s) 2097
BspACI CCGC 3 cut(s) 503, 1983, 2059
BspANI GGCC 3 cut(s) 151, 1474, 1782
BspCNI CTCAG 8 cut(s) 355, 1191, 1309, 1402, 1837, 1855, 1989, 2005
BspFNI CGCG 2 cut(s) 1456, 2097
BspHI TCATGA 1 cut(s) 1072
BspLI GGNNCC 2 cut(s) 358, 1205
BspMI ACCTGC 1 cut(s) 197
BspQI GCTCTTC 1 cut(s) 1025
BspT107I GGYRCC 1 cut(s) 1203
BsrGI TGTACA 1 cut(s) 1260
BsrI ACTGG 2 cut(s) 504, 1880
BssECI CCNNGG 1 cut(s) 609
BssMI GATC 2 cut(s) 871, 1210
BssNI GRCGYC 1 cut(s) 899
Bst2UI CCWGG 3 cut(s) 6, 303, 1336
Bst4CI ACNGT 4 cut(s) 63, 576, 894, 1682
Bst6I CTCTTC 1 cut(s) 1025
BstACI GRCGYC 1 cut(s) 899
BstAPI GCANNNNNTGC 1 cut(s) 461
BstAUI TGTACA 1 cut(s) 1260
BstBAI YACGTR 1 cut(s) 329
BstC8I GCNNGC 5 cut(s) 1037, 1314, 1773, 1871, 1987
BstDEI CTNAG 8 cut(s) 363, 1199, 1296, 1389, 1845, 1863, 1997, 2013
BstF5I GGATG 7 cut(s) 143, 571, 741, 931, 943, 1540, 1708
BstFNI CGCG 2 cut(s) 1456, 2097
BstKTI GATC 2 cut(s) 874, 1213
BstMAI GTCTC 3 cut(s) 96, 285, 407
BstMBI GATC 2 cut(s) 871, 1210
BstMWI GCNNNNNNNGC 6 cut(s) 461, 896, 1313, 1390, 1480, 1544
BstNI CCWGG 3 cut(s) 6, 303, 1336
BstNSI RCATGY 3 cut(s) 38, 252, 1989
BstSCI CCNGG 4 cut(s) 4, 146, 301, 1334
BstUI CGCG 2 cut(s) 1456, 2097
BstV2I GAAGAC 2 cut(s) 23, 31
BstXI CCANNNNNNTGG 1 cut(s) 78
BsuI GTATCC 1 cut(s) 2125
BsuRI GGCC 3 cut(s) 151, 1474, 1782
BtsCI GGATG 7 cut(s) 143, 571, 741, 931, 943, 1540, 1708
BtsI GCAGTG 3 cut(s) 493, 1307, 2133
BtsIMutI CAGTG 9 cut(s) 178, 360, 493, 497, 1153, 1307, 1599, 1887, 2133
BtuMI TCGCGA 1 cut(s) 2097
BveI ACCTGC 1 cut(s) 197
Cac8I GCNNGC 5 cut(s) 1037, 1314, 1773, 1871, 1987
CciI TCATGA 1 cut(s) 1072
Cfr13I GGNCC 3 cut(s) 808, 1472, 1841
CseI GACGC 2 cut(s) 888, 1331
CsiI ACCWGGT 1 cut(s) 1334
Csp6I GTAC 3 cut(s) 1136, 1204, 1261
CviQI GTAC 3 cut(s) 1136, 1204, 1261
DdeI CTNAG 8 cut(s) 363, 1199, 1296, 1389, 1845, 1863, 1997, 2013
DpnI GATC 2 cut(s) 873, 1212
DpnII GATC 2 cut(s) 871, 1210
DriI GACNNNNNGTC 1 cut(s) 259
EaeI YGGCCR 2 cut(s) 149, 1780
Eam1104I CTCTTC 1 cut(s) 1025
Eam1105I GACNNNNNGTC 1 cut(s) 259
EarI CTCTTC 1 cut(s) 1025
Ecl136II GAGCTC 1 cut(s) 1660
Eco24I GRGCYC 1 cut(s) 1662
Eco47I GGWCC 2 cut(s) 808, 1841
Eco53kI GAGCTC 1 cut(s) 1660
Eco57I CTGAAG 4 cut(s) 69, 636, 638, 1211
Eco72I CACGTG 1 cut(s) 329
EcoICRI GAGCTC 1 cut(s) 1660
EcoO109I RGGNCCY 2 cut(s) 808, 1472
EcoRII CCWGG 3 cut(s) 4, 301, 1334
EcoT22I ATGCAT 1 cut(s) 870
EcoT38I GRGCYC 1 cut(s) 1662
FalI AAGNNNNNCTT 4 cut(s) 653, 685, 1936, 1968
FauNDI CATATG 1 cut(s) 2108
Fnu4HI GCNGC 1 cut(s) 504
FokI GGATG 7 cut(s) 130, 578, 748, 938, 950, 1547, 1695
FriOI GRGCYC 1 cut(s) 1662
Fsp4HI GCNGC 1 cut(s) 504
FspBI CTAG 4 cut(s) 26, 230, 819, 1586
GluI GCNGC 1 cut(s) 504
GsuI CTGGAG 2 cut(s) 262, 1044
HaeIII GGCC 3 cut(s) 151, 1474, 1782
HapII CCGG 2 cut(s) 148, 1172
HgaI GACGC 2 cut(s) 888, 1331
Hin1I GRCGYC 1 cut(s) 899
HindIII AAGCTT 1 cut(s) 2036
HinfI GANTC 8 cut(s) 9, 260, 958, 1175, 1244, 1613, 1702, 2092
HpaII CCGG 2 cut(s) 148, 1172
HphI GGTGA 2 cut(s) 806, 893
Hpy166II GTNNAC 4 cut(s) 370, 491, 854, 1130
Hpy8I GTNNAC 4 cut(s) 370, 491, 854, 1130
HpyCH4III ACNGT 4 cut(s) 63, 576, 894, 1682
HpyCH4IV ACGT 3 cut(s) 328, 529, 1043
HpyCH4V TGCA 9 cut(s) 277, 344, 418, 455, 486, 674, 868, 1270, 1538
HpyF10VI GCNNNNNNNGC 6 cut(s) 461, 896, 1313, 1390, 1480, 1544
HpyF3I CTNAG 8 cut(s) 363, 1199, 1296, 1389, 1845, 1863, 1997, 2013
HpySE526I ACGT 3 cut(s) 328, 529, 1043
Hsp92I GRCGYC 1 cut(s) 899
KpnI GGTACC 1 cut(s) 1207
Kzo9I GATC 2 cut(s) 871, 1210
LguI GCTCTTC 1 cut(s) 1025
LmnI GCTCC 5 cut(s) 243, 296, 356, 1025, 1949
LweI GCATC 3 cut(s) 442, 1204, 1525
MabI ACCWGGT 1 cut(s) 1334
MaeI CTAG 4 cut(s) 26, 230, 819, 1586
MaeII ACGT 3 cut(s) 328, 529, 1043
MaeIII GTNAC 7 cut(s) 139, 155, 251, 599, 770, 794, 1096
MalI GATC 2 cut(s) 873, 1212
MboI GATC 2 cut(s) 871, 1210
MfeI CAATTG 2 cut(s) 1179, 1400
MhlI GDGCHC 3 cut(s) 248, 301, 1662
MlsI TGGCCA 1 cut(s) 1782
MluNI TGGCCA 1 cut(s) 1782
MlyI GAGTC 3 cut(s) 18, 269, 952
MmeI TCCRAC 5 cut(s) 274, 457, 1101, 1469, 1718
Mox20I TGGCCA 1 cut(s) 1782
Mph1103I ATGCAT 1 cut(s) 870
MroXI GAANNNNTTC 1 cut(s) 2091
MscI TGGCCA 1 cut(s) 1782
MseI TTAA 5 cut(s) 66, 426, 1331, 1653, 2102
MslI CAYNNNNRTG 2 cut(s) 288, 1071
Msp20I TGGCCA 1 cut(s) 1782
MspA1I CMGCKG 1 cut(s) 2059
MspI CCGG 2 cut(s) 148, 1172
MspR9I CCNGG 4 cut(s) 6, 148, 303, 1336
MunI CAATTG 2 cut(s) 1179, 1400
Mva1269I GAATGC 2 cut(s) 1016, 1386
MvaI CCWGG 3 cut(s) 6, 303, 1336
MvnI CGCG 2 cut(s) 1456, 2097
MwoI GCNNNNNNNGC 6 cut(s) 461, 896, 1313, 1390, 1480, 1544
NciI CCSGG 1 cut(s) 148
NdeI CATATG 1 cut(s) 2108
NdeII GATC 2 cut(s) 871, 1210
NlaIV GGNNCC 2 cut(s) 358, 1205
NmuCI GTSAC 4 cut(s) 139, 155, 251, 794
NruI TCGCGA 1 cut(s) 2097
NsiI ATGCAT 1 cut(s) 870
NspI RCATGY 3 cut(s) 38, 252, 1989
PaeI GCATGC 1 cut(s) 1989
PagI TCATGA 1 cut(s) 1072
PciI ACATGT 2 cut(s) 34, 248
PciSI GCTCTTC 1 cut(s) 1025
PctI GAATGC 2 cut(s) 1016, 1386
PdmI GAANNNNTTC 1 cut(s) 2091
PfeI GAWTC 5 cut(s) 1175, 1244, 1613, 1702, 2092
PflMI CCANNNNNTGG 1 cut(s) 1778
PkrI GCNGC 1 cut(s) 505
PleI GAGTC 3 cut(s) 17, 268, 952
PmaCI CACGTG 1 cut(s) 329
PmlI CACGTG 1 cut(s) 329
PpsI GAGTC 3 cut(s) 17, 268, 952
Ppu21I YACGTR 1 cut(s) 329
PpuMI RGGWCCY 1 cut(s) 808
PscI ACATGT 2 cut(s) 34, 248
PsiI TTATAA 3 cut(s) 1229, 1677, 1811
Psp124BI GAGCTC 1 cut(s) 1662
Psp1406I AACGTT 1 cut(s) 1043
Psp5II RGGWCCY 1 cut(s) 808
Psp6I CCWGG 3 cut(s) 4, 301, 1334
PspCI CACGTG 1 cut(s) 329
PspGI CCWGG 3 cut(s) 4, 301, 1334
PspN4I GGNNCC 2 cut(s) 358, 1205
PspPI GGNCC 3 cut(s) 808, 1472, 1841
PspPPI RGGWCCY 1 cut(s) 808
RruI TCGCGA 1 cut(s) 2097
RsaI GTAC 3 cut(s) 1137, 1205, 1262
RsaNI GTAC 3 cut(s) 1136, 1204, 1261
RseI CAYNNNNRTG 2 cut(s) 288, 1071
SacI GAGCTC 1 cut(s) 1662
SapI GCTCTTC 1 cut(s) 1025
SaqAI TTAA 5 cut(s) 66, 426, 1331, 1653, 2102
SatI GCNGC 1 cut(s) 504
Sau3AI GATC 2 cut(s) 871, 1210
Sau96I GGNCC 3 cut(s) 808, 1472, 1841
ScaI AGTACT 1 cut(s) 1137
SchI GAGTC 3 cut(s) 18, 269, 952
ScrFI CCNGG 4 cut(s) 6, 148, 303, 1336
SduI GDGCHC 3 cut(s) 248, 301, 1662
SexAI ACCWGGT 1 cut(s) 1334
SfaNI GCATC 3 cut(s) 442, 1204, 1525
SinI GGWCC 2 cut(s) 808, 1841
SmiMI CAYNNNNRTG 2 cut(s) 288, 1071
SmlI CTYRAG 1 cut(s) 1895
SmoI CTYRAG 1 cut(s) 1895
SpeI ACTAGT 1 cut(s) 25
SphI GCATGC 1 cut(s) 1989
SsiI CCGC 3 cut(s) 503, 1983, 2059
SspI AATATT 2 cut(s) 273, 2020
SspMI CTAG 4 cut(s) 26, 230, 819, 1586
SstI GAGCTC 1 cut(s) 1662
StyD4I CCNGG 4 cut(s) 4, 146, 301, 1334
TaaI ACNGT 4 cut(s) 63, 576, 894, 1682
TaiI ACGT 3 cut(s) 331, 532, 1046
TaqI TCGA 1 cut(s) 1705
TatI WGTACW 2 cut(s) 1135, 1260
TauI GCSGC 1 cut(s) 506
TfiI GAWTC 5 cut(s) 1175, 1244, 1613, 1702, 2092
Tru1I TTAA 5 cut(s) 66, 426, 1331, 1653, 2102
Tru9I TTAA 5 cut(s) 66, 426, 1331, 1653, 2102
TscAI CASTG 9 cut(s) 178, 367, 493, 504, 1153, 1314, 1606, 1887, 2133
TseFI GTSAC 4 cut(s) 139, 155, 251, 794
Tsp45I GTSAC 4 cut(s) 139, 155, 251, 794
TspDTI ATGAA 5 cut(s) 408, 1359, 2012, 2100, 2155
TspRI CASTG 9 cut(s) 178, 367, 493, 504, 1153, 1314, 1606, 1887, 2133
Van91I CCANNNNNTGG 1 cut(s) 1778
VpaK11BI GGWCC 2 cut(s) 808, 1841
XapI RAATTY 4 cut(s) 704, 1004, 1327, 1688
XbaI TCTAGA 1 cut(s) 229
XceI RCATGY 3 cut(s) 38, 252, 1989
XmnI GAANNNNTTC 1 cut(s) 2091
XspI CTAG 4 cut(s) 26, 230, 819, 1586
ZrmI AGTACT 1 cut(s) 1137
Zsp2I ATGCAT 1 cut(s) 870
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.