Prupe.2G023500_v2.0.a1

disease resistance

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp02
OG0000070
Physical Location & Seq
Forward (+)
2273679 .. 2279248
5570 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.2G023500.2

Sequence Viewer

Length: 3963 bp
ATGGCAGTGGGAGAGATTTTTCTTGGGGCGTTCCTTCAGGTGCTGCTCGACAAGTTGGCGCCTCGCGAGATCCTCAACTACTTTGGTCTCGTAAAGGGCGTCGACAAAAAGCTGAATAAATGGAGTGACAATTTGTCTGCAATCGTAGCGGTGCTGAATGATGCGGAGGAGAAGCAACTGATAGAGCATCGTGTGAAATTGTGGCTGGATGAACTCAGAGACTTGGCTTATGATGTAGATGACGTGCTGGACAAATTTGCTACTAAAATATTGAAGCGCCAGATAGAGGGACGGGATCAAGCCAGCACAAGTAAAAAGGTGCAGAGTTTATTCCCCAAACTGAAACTCAATTTCGATATGAACTCTGAGATAAAGAAGATTACAGAGCGGTTGCAAGAGATCTCTGAACGGAAAGATAAGTTTGGTTTAAAGGGCACCGGAACGTCTAGTAAAGCATGGTCAAGGCCACCAACTTCAGGTGTGCTAGGTGGACTAACCATTGTTGGAAGAGAGGGAGATAAAGCAAAAATATTAGACATGTTGTCGAGAGATGAGCATAATAATGTCAACTTTCATGTTGTTGCCATTGTTGGCATGGCTGGCCTTGGGAAGACTACACTTGCTCAATTTGCATTCAACAACAACAGTGATGTCATGAAGGAGTTCGAGCCGAGGGTGTGGGTGTCTGTGTCCGATGACTTCGACATTGTAAGAGTGACGAAGGCAATTCTTGAATCAGTCACATCTCAACCCGTTAAAGTAGAGGAGTTCAGTAAAATGCAGCATGATTTGAATGAGCAGTTAAGAGGTAAAAAGTTTTTAATTGTTTTAGATGATATTTGGAACAAAGGTGATTTATATGATCTGTGGACAAGACTTCAGTCCCCTTTTAGTGTTGGAGCACAAGGAAGTAAGATAATTGTGACAACACGAGACCTAAAAGTTGCAAAGATTATGGGAGCCACCGAAGTTCATAACTTGGAGTCTATGTCAGATGATAATTGTTTGGAAATATTTGAGCAGCATGCATTTGCGAACATTAACAATGATAGACCACCAAATTTTGAGTTGATTCAGAAAAAAATTGCTGAAAAATGCAGTGGATTGCCCTTAGCTGCAAGAACTCTTGGTGGGCTTTTACGTCAGAATGAAATAAACGAATGGGAAGAAATATTGAACAACAAATTGTGGAATTTATCAGGTAAGAGTGACATTCTTCCGGTATTAAAGTTGAGTTATCACTATCTTCCTTCCAACTTGAAGAGGTGTTTTGCCTATTGCTCAATATTTCCAAATGACTACGAATTTGGGGAGAAGCAATTGATCCTTTTATGGATGGCAGAGGGTTTGATTCAACAACCACCAGAAGCCAATAGACAAATGGAGGATTTAGGCCACGACTATTTTCAAGAGCTATTATGTAGGTCATTATTTCAAAAGGCAAGTGAAAACAGTTCACGATATGTAATGCATGACCTTGTTACTGATTTGGCAAAATGGGCAGCAGGAAATACTTGTTTTAGATTGGAGGACAAGAAAGGTGATAGCTTGCAATCTGTATGCTTTCGTCATTCGTCTTTCATAATTGGTGAGTTTGATGGAGTTCAAAAGTTTGAGGCCTATCGCGAAGTTAAACGTTTGCGAACATTCCTGCCACTTTCACTATCAGATACTCGGTGGAGTAGACAATATCTGGCTCGTACGGTAATTTTTGATTTATTACCTCAGATGCAATACTTACGGGTGCTTTCTTTGAATGGCTATCAAATAACTGAGCTGCCAGATTCAATTGGTAATTTGAAGTATCTGCGGTATCTTGATTTTTCTCACACAAATATAACAAGTTTGCCTGAATCAACAACCACTCTTTTCAACTTACAGACACTGATATTGGAAGGTTGTCGTTATTTGAAGGCACTACCCATGAACTTGAGGAATCTAGTGAATCTGCGTCATCTCAATAACTCAGATGTAGGTTCACTGAAAGCAATGCCTCCGCAACTAGGTCGGTTGACAAATCTGCAATCTTTGCCTAATTTTGTGGTGGGTAAAGGAAGTGATGAATCAGGGATAAGAGAGATAGGATCCCTATCCCATCTCCGAGGGACATTATCGCTCTCAAGGTTGGAGAATGTGATCGATGCTGAGGATGCACGGAAGGCCGACTTAAAATCCAAGGAGAGAGTAGATGAATTGGTGCTAGAATGGTCGGATAACACACAAGAAACGCAATTAGGCGTGCTTGACAGATTAGAACCTCATAGAAAGCTTGAAAAACTCATCATCAGGGGTTATGCTGGATTAGAATTTTCAACATGGATTGGAGATCGTTTATTCTCCACTATATATGCACAACTGGAAGAATGGCTTCCTTTCGCACAAGATCAGGTTTTCCCTTGCTTGAAATTGCTTTCAATCAGAAATTGTCCTCAATTGGAGGGTAAGGTGCCCGAGAACCTTGATTCATTAGCAACACTTCAAATCATTAAATGCGAGGAATTGGTGATTTCAATTTCCAACTATAAACAAATTGGTCGATTATGGATAGATGGCTGCAAAGCGGTGGTGGAGACAAGTGGCGTTGAGTTTGAGTTATTAAATTCCCTGGGGCTTTCAAATATTTCAGAGGTGAGGTTCCAAACAGGGGAATTCACCAAAGGATTAAGGAAGGTTGCAAATTTGAGGATTGGCGGATGTGAGGAGCTGACATCTTCACTGAAGAATGAGGATAGAGTATTGCAACACTTGATTTCTCTTGATTGTTTGGTTATTGAAGGAAACTCTTCCCTCCTTGAAAAGCTGGGAAAAGAAGCAGAGGAGTTGCTGCAATTGCAAATATTGACTTGCAAGCTTAAATATCTACTATTATACAAGTGTGCAAGTCTTTCGAAGGTACCAGAAGGGTTGCATCACCTAACGGCTCTTCAAGACCTTCAAATAGTTGGATGCTCAAGTCTGGTTTCTTTTCCAGATGTTGGTCTGCCTCCTTCCCTTGAAGTCATAAGGATTGAGGAGTGTGATTCGTTGCTGTATTTCGCAAAATACCAGATTCCCCCAAATCTAAGAAGAATAGAGATAACGAGGTGTAAAAGTTTGAAATCATTAGTAGAGAAAGACGAGGATAGTTCGTCGTCTTCCTCTTCTTCTCATATTTCTCTTGAGCACTTGGAAATATTGGGATGTGAATCTCTAACGTTGTTATCATTGAGAGCCCAGTTGTTTCCCAGGGCACTTAAAAGCCTACGCATATCCTATTGCCCAAATCTGAAATCGTTACCGGAGGGCCTATGCTACCTCACCAACCTTCAAACTTTAGAGACTTATCGTTGTGGGAGTCTGGTTTCCATCCCGAGCCTGAGTGGTGAGGGTTTGCCTTCGCCAACAACAACAGCCGCCTCCAGCCTGAAAGAAATCTACATCGAAAATTGCAACAAATTGGAGATGTTACCGGACATGTGCAATCTCAACTGTCTTCAGGAATTGAATATTGATTACGGTGAAGGTTTAAATTTCACTTCCTTTCCCCCCAACCTAACATCACTTACAATTAGTGGATTCAAGAATTGTAAGCCGCTGTGGGAGTTGTTGCACAGGCTCACCTCTCTTACAGGCTTGTCCATCAATGGTGAAGACCCAAGTGTGGTGTCATTTCCACCCAACAGTTACAGGGAGATGGAGATGGAGATGCTGCTCCCCGAATCTCTCACTCATCTCTCAATTGGGGGCTTCCCAAATCTGAAGAAACTGAGCAGCAAGGGCTTTCAATCCCTCACCTCTCTTCGATCTCTTAGACTCCACAATTCTCCAAAGCTGGCATCTATTCCAGTGGAGGGGTTGCCTATTTCACTGAGGGAACTTAAAATCATTAGGTGTCCTCTTCTAAAAGATAAATGCCAGCCTGGAAGTAAAGGACGATACCTGCCCAAAATATCCCACATCCCCCGCATAGGGATATGGGATTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04014 map04014
Pfam Domains
Protein Families
NB-ARC

Protein Analysis

1321

Amino Acids

148.93

Weight (kDa)

6.3

Isoelectric Point (pI)

43.49

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000070)

Species Orthologous Gene IDs
fragaria_vesca FvH4_7g00360 FvH4_7g00850 FvH4_7g02400 FvH4_7g02430 FvH4_7g02450 FvH4_7g25671 FvH4_7g25680 FvH4_7g25683 FvH4_7g26980 FvH4_7g27330 FvH4_7g27355 FvH4_7g27610 FvH4_7g27642 FvH4_7g27890 FvH4_7g27891 FvH4_7g27891 FvH4_7g27891 FvH4_7g28110 FvH4_7g28390
malus_domestica MD00G1070800.v1.1 MD00G1168000.v1.1 MD00G1168300.v1.1 MD00G1168700.v1.1 MD02G1293100.v1.1 MD02G1293200.v1.1 MD02G1314300.v1.1 MD03G1009000.v1.1 MD03G1009400.v1.1 MD03G1042300.v1.1 MD03G1042400.v1.1 MD07G1033600.v1.1 MD07G1033700.v1.1 MD07G1033900.v1.1 MD11G1011400.v1.1 MD11G1011700.v1.1 MD11G1029800.v1.1 MD11G1029900.v1.1 MD11G1030300.v1.1 MD11G1030400.v1.1 MD11G1030500.v1.1 MD11G1031300.v1.1 MD11G1031600.v1.1 MD11G1032000.v1.1 MD11G1033200.v1.1 MD11G1033600.v1.1 MD11G1033800.v1.1 MD11G1033900.v1.1 MD11G1034100.v1.1 MD11G1034400.v1.1 MD11G1040600.v1.1 MD11G1041100.v1.1 MD11G1043100.v1.1 MD11G1043500.v1.1 MD11G1044500.v1.1 MD11G1045100.v1.1 MD11G1045600.v1.1
prunus_persica Prupe.2G022400_v2.0.a1 Prupe.2G022400_v2.0.a1 Prupe.2G022400_v2.0.a1 Prupe.2G022500_v2.0.a1 Prupe.2G022500_v2.0.a1 Prupe.2G022900_v2.0.a1 Prupe.2G023500_v2.0.a1 Prupe.2G023500_v2.0.a1 Prupe.2G023500_v2.0.a1 Prupe.2G023500_v2.0.a1 Prupe.2G023500_v2.0.a1 Prupe.2G023500_v2.0.a1 Prupe.2G023600_v2.0.a1 Prupe.2G028000_v2.0.a1 Prupe.2G030200_v2.0.a1 Prupe.2G067600_v2.0.a1 Prupe.8G117900_v2.0.a1
pyrus_communis pycom02g26350 pycom03g03270 pycom07g02370 pycom11g00750 pycom11g00790 pycom11g02340 pycom11g02370 pycom11g02380 pycom11g02390 pycom11g02410 pycom11g02460 pycom11g02470 pycom11g02500 pycom11g02510 pycom11g02520 pycom11g02530 pycom11g02580 pycom11g02590 pycom11g02680 pycom11g02710 pycom11g02720 pycom11g02730 pycom11g02750 pycom11g02760 pycom11g02770 pycom11g03690 pycom13g25120 pycom13g25130 pycom13g25140 pycom13g25170 pycom13g25180 pycom13g25190 pycom13g25210
rosa_chinensis RchiOBHm_Chr1g0315001 RchiOBHm_Chr1g0315411 RchiOBHm_Chr1g0317951 RchiOBHm_Chr1g0319741 RchiOBHm_Chr1g0319841 RchiOBHm_Chr1g0319911 RchiOBHm_Chr1g0319991 RchiOBHm_Chr1g0320001 RchiOBHm_Chr1g0320021 RchiOBHm_Chr1g0320081 RchiOBHm_Chr1g0320111 RchiOBHm_Chr1g0320131 RchiOBHm_Chr1g0320161 RchiOBHm_Chr1g0320171 RchiOBHm_Chr1g0320241 RchiOBHm_Chr1g0320281 RchiOBHm_Chr1g0320411 RchiOBHm_Chr1g0320461 RchiOBHm_Chr1g0320551 RchiOBHm_Chr1g0320581 RchiOBHm_Chr1g0320661 RchiOBHm_Chr1g0320891 RchiOBHm_Chr1g0320971 RchiOBHm_Chr1g0321021 RchiOBHm_Chr1g0321031 RchiOBHm_Chr1g0321091 RchiOBHm_Chr1g0321351 RchiOBHm_Chr1g0321481 RchiOBHm_Chr1g0321491 RchiOBHm_Chr1g0327521 RchiOBHm_Chr1g0328061 RchiOBHm_Chr1g0334991 RchiOBHm_Chr1g0373781 RchiOBHm_Chr1g0373891 RchiOBHm_Chr1g0374841 RchiOBHm_Chr2g0131111 RchiOBHm_Chr2g0131121 RchiOBHm_Chr4g0408901 RchiOBHm_Chr5g0041691 RchiOBHm_Chr7g0237021
rosa_laevigata RLG00000019168 RLG00000030456 RLG00000030460 RLG00000030571
rosa_multiflora Rmu_co7963468.1_g000001 Rmu_co7991248.1_g000001 Rmu_co8195256.1_g000001 Rmu_co8312199.1_g000001 Rmu_co8349215.1_g000001 Rmu_co8351041.1_g000001 Rmu_co8422719.1_g000001 Rmu_co8450711.1_g000001 Rmu_co8465555.1_g000001 Rmu_co8489965.1_g000001 Rmu_sc0000087.1_g000014 Rmu_sc0000272.1_g000015 Rmu_sc0000724.1_g000006 Rmu_sc0000724.1_g000021 Rmu_sc0000724.1_g000022 Rmu_sc0000861.1_g000024 Rmu_sc0001049.1_g000006 Rmu_sc0001049.1_g000007 Rmu_sc0001512.1_g000001 Rmu_sc0002022.1_g000004 Rmu_sc0002063.1_g000011 Rmu_sc0002131.1_g000024 Rmu_sc0002337.1_g000012 Rmu_sc0002341.1_g000005 Rmu_sc0002539.1_g000117 Rmu_sc0002745.1_g000005 Rmu_sc0002745.1_g000006 Rmu_sc0003145.1_g000002 Rmu_sc0003199.1_g000007 Rmu_sc0003270.1_g000039 Rmu_sc0003270.1_g000040 Rmu_sc0003423.1_g000001 Rmu_sc0003423.1_g000002 Rmu_sc0003629.1_g000067 Rmu_sc0004039.1_g000002 Rmu_sc0004555.1_g000001 Rmu_sc0004555.1_g000005 Rmu_sc0004555.1_g000006 Rmu_sc0004947.1_g000025 Rmu_sc0004947.1_g000026 Rmu_sc0005255.1_g000025 Rmu_sc0007977.1_g000016 Rmu_sc0008752.1_g000005 Rmu_sc0009236.1_g000004 Rmu_sc0009236.1_g000008 Rmu_sc0009236.1_g000009 Rmu_sc0009236.1_g000010 Rmu_sc0011424.1_g000036 Rmu_sc0013413.1_g000001 Rmu_sc0013735.1_g000002 Rmu_sc0015304.1_g000002 Rmu_sc0015304.1_g000003 Rmu_sc0015585.1_g000001 Rmu_sc0018410.1_g000001 Rmu_sc0022723.1_g000001 Rmu_sc0022723.1_g000002 Rmu_sc0022724.1_g000001 Rmu_sc0023430.1_g000001 Rmu_sc0026053.1_g000001 Rmu_sc0026429.1_g000002 Rmu_sc0026647.1_g000001 Rmu_sc0031359.1_g000001 Rmu_ssc0000042.1_g000040 Rmu_ssc0000081.1_g000001 Rmu_ssc0000300.1_g000011
rosa_roxburghii Rroxscaffold_160G00433620 Rroxscaffold_160G00433990 Rroxscaffold_1G00038820 Rroxscaffold_2G00113190 Rroxscaffold_4G00283240 Rroxscaffold_4G00283930 Rroxscaffold_4G00284010 Rroxscaffold_4G00322600 Rroxscaffold_4G00327710 Rroxscaffold_4G00328100 Rroxscaffold_4G00328130 Rroxscaffold_4G00331590 Rroxscaffold_5G00353280
rosa_rugosa Rorug01G0004200 Rorug01G0018800 Rorug01G0018900 Rorug01G0029900 Rorug01G0030000 Rorug01G0030000 Rorug01G0030000 Rorug01G0030200 Rorug01G0030300 Rorug01G0030800 Rorug01G0032400 Rorug01G0032900 Rorug01G0055800 Rorug01G0067600 Rorug01G0067700 Rorug01G0067800 Rorug01G0067900 Rorug01G0068000 Rorug01G0379500 Rorug01G0379600 Rorug01G0379600 Rorug01G0385200 Rorug01G0385300 Rorug02G0295100 Rorug04G0088500 Rorug04G0088600 Rorug05G0194900 Rorug07G0301400
rosa_samantha Rh1AG014800 Rh1AG015200 Rh1AG030500 Rh1AG041800 Rh1AG042300 Rh1AG042700 Rh1AG042800 Rh1AG042900 Rh1AG045000 Rh1AG085100 Rh1AG085200 Rh1AG388600 Rh1AG396700 Rh1AG396900 Rh1BG007300 Rh1BG039200 Rh1BG039600 Rh1BG042800 Rh1BG067300 Rh1BG109700 Rh1BG109900 Rh1BG354000 Rh1CG043800 Rh1CG044400 Rh1DG008600 Rh1DG022900 Rh1DG023400 Rh1DG023600 Rh1DG023900 Rh1DG024100 Rh1DG024400 Rh1DG024500 Rh1DG025500 Rh1DG025700 Rh1DG026500 Rh1DG026800 Rh1DG038900 Rh1DG048800 Rh1DG049300 Rh1DG051700 Rh1DG052000 Rh1DG146200 Rh1DG383500 Rh2BG354900 Rh2CG333600 Rh4BG149600 Rh4BG149700 Rh4CG160600
rosa_wichuraiana Rw0G001100 Rw0G001130 Rw0G001180 Rw0G012580 Rw1G003480 Rw1G003540 Rw1G003600 Rw1G003640 Rw1G003670 Rw1G003750 Rw1G003940 Rw1G006650 Rw1G034550 Rw1G034560 Rw1G034650 Rw1G034660 Rw1G035170 Rw1G035190 Rw1G037060 Rw2G028210 Rw4G012540 Rw5G026370 Rw7G037900

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 3927
Acc65I GGTACC 1 cut(s) 2893
AccB1I GGYRCC 4 cut(s) 58, 434, 2446, 2893
AccB7I CCANNNNNTGG 1 cut(s) 2975
AccBSI CCGCTC 1 cut(s) 388
AccI GTMKAC 2 cut(s) 102, 1684
AccII CGCG 2 cut(s) 66, 1626
AclI AACGTT 2 cut(s) 1636, 3194
AclWI GGATC 5 cut(s) 64, 303, 1318, 2079, 2092
AcsI RAATTY 9 cut(s) 254, 1060, 1192, 1304, 2306, 2599, 2648, 2677, 3508
AcuI CTGAAG 6 cut(s) 20, 459, 863, 2738, 3458, 3758
AcyI GRCGYC 2 cut(s) 59, 99
AfaI GTAC 2 cut(s) 1702, 2895
AfiI CCNNNNNNNGG 9 cut(s) 286, 476, 2003, 2644, 2975, 3640, 3830, 3947, 3948
AflIII ACRYGT 2 cut(s) 537, 3453
AhdI GACNNNNNGTC 2 cut(s) 133, 541
AjiI CACGTC 1 cut(s) 244
AjnI CCWGG 3 cut(s) 2604, 3224, 3898
Alw21I GWGCWC 2 cut(s) 904, 3165
Alw26I GTCTC 5 cut(s) 92, 213, 927, 2564, 3311
AlwI GGATC 5 cut(s) 64, 303, 1318, 2079, 2092
AlwNI CAGNNNCTG 2 cut(s) 43, 1885
Ama87I CYCGRG 2 cut(s) 2450, 3349
AoxI GGCC 6 cut(s) 464, 601, 1393, 1617, 2160, 3283
ApoI RAATTY 9 cut(s) 254, 1060, 1192, 1304, 2306, 2599, 2648, 2677, 3508
ArsI GACNNNNNNTTYG 2 cut(s) 1289, 1321
Asp700I GAANNNNTTC 3 cut(s) 662, 2367, 2782
Asp718I GGTACC 1 cut(s) 2893
AspLEI GCGC 2 cut(s) 61, 279
AspS9I GGNCC 1 cut(s) 3283
AsuII TTCGAA 1 cut(s) 2888
AvaI CYCGRG 2 cut(s) 2450, 3349
BaeGI GKGCMC 3 cut(s) 437, 2451, 3232
BamHI GGATCC 1 cut(s) 2084
BanI GGYRCC 4 cut(s) 58, 434, 2446, 2893
BanII GRGCYC 1 cut(s) 3214
BauI CACGAG 1 cut(s) 930
BbsI GAAGAC 4 cut(s) 617, 3126, 3464, 3636
Bbv12I GWGCWC 2 cut(s) 904, 3165
BbvCI CCTCAGC 1 cut(s) 2145
BccI CCATC 8 cut(s) 1330, 1592, 2103, 2543, 3353, 3626, 3667, 3673
BceAI ACGGC 1 cut(s) 2934
BcgI CGANNNNNNTGC 4 cut(s) 1988, 2022, 2868, 2902
BciT130I CCWGG 3 cut(s) 2606, 3226, 3900
BcoDI GTCTC 5 cut(s) 92, 213, 927, 2564, 3311
BfaI CTAG 5 cut(s) 447, 485, 1940, 2003, 2201
BfoI RGCGCY 2 cut(s) 62, 280
BfuAI ACCTGC 1 cut(s) 3927
BglII AGATCT 1 cut(s) 399
Bme1390I CCNGG 3 cut(s) 2606, 3226, 3900
BmeRI GACNNNNNGTC 2 cut(s) 133, 541
BmeT110I CYCGRG 2 cut(s) 2450, 3349
BmgBI CACGTC 1 cut(s) 244
BmgT120I GGNCC 1 cut(s) 3283
BmiI GGNNCC 7 cut(s) 60, 436, 961, 2086, 2448, 2636, 2895
BmrFI CCNGG 3 cut(s) 2606, 3226, 3900
BmrI ACTGGG 1 cut(s) 3208
BmsI GCATC 9 cut(s) 151, 196, 1719, 2131, 2140, 2917, 2936, 3675, 3824
BmuI ACTGGG 1 cut(s) 3208
BoxI GACNNNNGTC 1 cut(s) 880
BpiI GAAGAC 4 cut(s) 617, 3126, 3464, 3636
BpmI CTGGAG 1 cut(s) 3382
Bpu10I CCTNAGC 2 cut(s) 1111, 2145
Bpu14I TTCGAA 1 cut(s) 2888
BpuEI CTTGAG 4 cut(s) 1951, 2104, 2935, 3179
Bsa29I ATCGAT 1 cut(s) 2139
BsaBI GATNNNNATC 2 cut(s) 2089, 3184
BsaHI GRCGYC 2 cut(s) 59, 99
BsaI GGTCTC 2 cut(s) 92, 927
BsaJI CCNNGG 8 cut(s) 604, 671, 2101, 2175, 2604, 2605, 3224, 3225
BsaWI WCCGGW 4 cut(s) 437, 1219, 3277, 3448
BsaXI ACNNNNNCTCC 2 cut(s) 974, 1004
Bsc4I CCNNNNNNNGG 9 cut(s) 286, 476, 2003, 2644, 2975, 3640, 3830, 3947, 3948
Bse1I ACTGG 3 cut(s) 2361, 3214, 3824
Bse3DI GCAATG 1 cut(s) 1995
Bse8I GATNNNNATC 2 cut(s) 2089, 3184
BseBI CCWGG 3 cut(s) 2606, 3226, 3900
BseCI ATCGAT 1 cut(s) 2139
BseDI CCNNGG 8 cut(s) 604, 671, 2101, 2175, 2604, 2605, 3224, 3225
BseGI GGATG 8 cut(s) 214, 1341, 2155, 2699, 2951, 3185, 3345, 3936
BseJI GATNNNNATC 2 cut(s) 2089, 3184
BseLI CCNNNNNNNGG 9 cut(s) 286, 476, 2003, 2644, 2975, 3640, 3830, 3947, 3948
BseMI GCAATG 1 cut(s) 1995
BseMII CTCAG 9 cut(s) 229, 357, 1739, 1764, 1980, 2136, 3347, 3737, 3839
BseNI ACTGG 3 cut(s) 2361, 3214, 3824
BseRI GAGGAG 5 cut(s) 182, 779, 2714, 2831, 3026
BseSI GKGCMC 3 cut(s) 437, 2451, 3232
BseYI CCCAGC 1 cut(s) 2800
BsgI GTGCAG 1 cut(s) 341
Bsh1236I CGCG 2 cut(s) 66, 1626
BshFI GGCC 6 cut(s) 466, 603, 1395, 1619, 2162, 3285
BshNI GGYRCC 4 cut(s) 58, 434, 2446, 2893
BshVI ATCGAT 1 cut(s) 2139
BsiHKAI GWGCWC 2 cut(s) 904, 3165
BsiHKCI CYCGRG 2 cut(s) 2450, 3349
BsiSI CCGG 4 cut(s) 438, 1220, 3278, 3449
BsiWI CGTACG 1 cut(s) 1700
BslFI GGGAC 3 cut(s) 303, 868, 2119
BslI CCNNNNNNNGG 9 cut(s) 286, 476, 2003, 2644, 2975, 3640, 3830, 3947, 3948
BsmAI GTCTC 5 cut(s) 92, 213, 927, 2564, 3311
BsmFI GGGAC 3 cut(s) 303, 868, 2119
BsmI GAATGC 1 cut(s) 632
BsnI GGCC 6 cut(s) 466, 603, 1395, 1619, 2162, 3285
Bso31I GGTCTC 2 cut(s) 92, 927
BsoBI CYCGRG 2 cut(s) 2450, 3349
Bsp119I TTCGAA 1 cut(s) 2888
Bsp1286I GDGCHC 6 cut(s) 437, 904, 2451, 3165, 3214, 3232
Bsp68I TCGCGA 2 cut(s) 66, 1626
BspANI GGCC 6 cut(s) 466, 603, 1395, 1619, 2162, 3285
BspCNI CTCAG 9 cut(s) 228, 358, 1738, 1765, 1979, 2137, 3348, 3738, 3840
BspDI ATCGAT 1 cut(s) 2139
BspFNI CGCG 2 cut(s) 66, 1626
BspHI TCATGA 1 cut(s) 654
BspLI GGNNCC 7 cut(s) 60, 436, 961, 2086, 2448, 2636, 2895
BspMI ACCTGC 1 cut(s) 3927
BspPI GGATC 5 cut(s) 64, 303, 1318, 2079, 2092
BspQI GCTCTTC 1 cut(s) 2928
BspT104I TTCGAA 1 cut(s) 2888
BspT107I GGYRCC 4 cut(s) 58, 434, 2446, 2893
BspTNI GGTCTC 2 cut(s) 92, 927
BsrBI CCGCTC 1 cut(s) 388
BsrDI GCAATG 1 cut(s) 1995
BsrI ACTGG 3 cut(s) 2361, 3214, 3824
BssECI CCNNGG 8 cut(s) 604, 671, 2101, 2175, 2604, 2605, 3224, 3225
BssNI GRCGYC 2 cut(s) 59, 99
BssSI CACGAG 1 cut(s) 930
BssT1I CCWWGG 2 cut(s) 604, 2175
Bst2BI CACGAG 1 cut(s) 930
Bst2UI CCWGG 3 cut(s) 2606, 3226, 3900
Bst4CI ACNGT 6 cut(s) 647, 1454, 1705, 3470, 3497, 3662
Bst6I CTCTTC 7 cut(s) 502, 1256, 2788, 2928, 3145, 3783, 3882
BstACI GRCGYC 2 cut(s) 59, 99
BstAPI GCANNNNNTGC 1 cut(s) 2029
BstBI TTCGAA 1 cut(s) 2888
BstC8I GCNNGC 8 cut(s) 304, 601, 1026, 1550, 2240, 2849, 3813, 3896
BstF5I GGATG 8 cut(s) 214, 1341, 2155, 2699, 2951, 3185, 3345, 3936
BstFNI CGCG 2 cut(s) 66, 1626
BstH2I RGCGCY 2 cut(s) 62, 280
BstHHI GCGC 2 cut(s) 61, 279
BstMAI GTCTC 5 cut(s) 92, 213, 927, 2564, 3311
BstMWI GCNNNNNNNGC 9 cut(s) 146, 600, 629, 1499, 2029, 2150, 2159, 2830, 3756
BstNI CCWGG 3 cut(s) 2606, 3226, 3900
BstNSI RCATGY 3 cut(s) 541, 1028, 3457
BstPAI GACNNNNGTC 1 cut(s) 880
BstSCI CCNGG 3 cut(s) 2604, 3224, 3898
BstSLI GKGCMC 3 cut(s) 437, 2451, 3232
BstUI CGCG 2 cut(s) 66, 1626
BstV2I GAAGAC 4 cut(s) 617, 3126, 3464, 3636
BstX2I RGATCY 3 cut(s) 69, 399, 2084
BstYI RGATCY 3 cut(s) 69, 399, 2084
Bsu15I ATCGAT 1 cut(s) 2139
BsuRI GGCC 6 cut(s) 466, 603, 1395, 1619, 2162, 3285
BsuTUI ATCGAT 1 cut(s) 2139
BtrI CACGTC 1 cut(s) 244
BtsCI GGATG 8 cut(s) 214, 1341, 2155, 2699, 2951, 3185, 3345, 3936
BtsI GCAGTG 2 cut(s) 12, 1105
BtsIMutI CAGTG 8 cut(s) 12, 652, 1105, 1883, 1979, 2714, 3831, 3845
BtuMI TCGCGA 2 cut(s) 66, 1626
BveI ACCTGC 1 cut(s) 3927
Cac8I GCNNGC 8 cut(s) 304, 601, 1026, 1550, 2240, 2849, 3813, 3896
CaiI CAGNNNCTG 2 cut(s) 43, 1885
CciI TCATGA 1 cut(s) 654
CfoI GCGC 2 cut(s) 61, 279
Cfr13I GGNCC 1 cut(s) 3283
ClaI ATCGAT 1 cut(s) 2139
CseI GACGC 2 cut(s) 88, 1940
Csp6I GTAC 2 cut(s) 1701, 2894
CviQI GTAC 2 cut(s) 1701, 2894
DinI GGCGCC 1 cut(s) 60
DraI TTTAAA 2 cut(s) 429, 3507
DriI GACNNNNNGTC 2 cut(s) 133, 541
Eam1104I CTCTTC 7 cut(s) 502, 1256, 2788, 2928, 3145, 3783, 3882
Eam1105I GACNNNNNGTC 2 cut(s) 133, 541
EarI CTCTTC 7 cut(s) 502, 1256, 2788, 2928, 3145, 3783, 3882
EciI GGCGGA 1 cut(s) 2706
Eco130I CCWWGG 2 cut(s) 604, 2175
Eco147I AGGCCT 1 cut(s) 1619
Eco24I GRGCYC 1 cut(s) 3214
Eco31I GGTCTC 2 cut(s) 92, 927
Eco57I CTGAAG 6 cut(s) 20, 459, 863, 2738, 3458, 3758
Eco88I CYCGRG 2 cut(s) 2450, 3349
EcoO109I RGGNCCY 1 cut(s) 3283
EcoRI GAATTC 1 cut(s) 2648
EcoRII CCWGG 3 cut(s) 2604, 3224, 3898
EcoT14I CCWWGG 2 cut(s) 604, 2175
EcoT22I ATGCAT 2 cut(s) 1030, 1473
EcoT38I GRGCYC 1 cut(s) 3214
EgeI GGCGCC 1 cut(s) 60
EheI GGCGCC 1 cut(s) 60
ErhI CCWWGG 2 cut(s) 604, 2175
FalI AAGNNNNNCTT 4 cut(s) 2150, 2182, 2352, 2384
FaqI GGGAC 3 cut(s) 303, 868, 2119
FauI CCCGC 1 cut(s) 3950
FblI GTMKAC 2 cut(s) 102, 1684
FokI GGATG 8 cut(s) 221, 1348, 2162, 2706, 2958, 3192, 3332, 3923
FriOI GRGCYC 1 cut(s) 3214
FspBI CTAG 5 cut(s) 447, 485, 1940, 2003, 2201
GlaI GCGC 2 cut(s) 60, 278
GsaI CCCAGC 1 cut(s) 2804
GsuI CTGGAG 1 cut(s) 3382
HaeII RGCGCY 2 cut(s) 62, 280
HaeIII GGCC 6 cut(s) 466, 603, 1395, 1619, 2162, 3285
HapII CCGG 4 cut(s) 438, 1220, 3278, 3449
HgaI GACGC 2 cut(s) 88, 1940
HhaI GCGC 2 cut(s) 61, 279
Hin1I GRCGYC 2 cut(s) 59, 99
Hin6I GCGC 2 cut(s) 59, 277
HinP1I GCGC 2 cut(s) 59, 277
HincII GTYRAC 3 cut(s) 103, 568, 2013
HindII GTYRAC 3 cut(s) 103, 568, 2013
HindIII AAGCTT 2 cut(s) 2267, 2849
HpaII CCGG 4 cut(s) 438, 1220, 3278, 3449
Hpy166II GTNNAC 8 cut(s) 103, 491, 568, 870, 1457, 1685, 1979, 2013
Hpy8I GTNNAC 8 cut(s) 103, 491, 568, 870, 1457, 1685, 1979, 2013
Hpy99I CGWCG 2 cut(s) 104, 3133
HpyCH4III ACNGT 6 cut(s) 647, 1454, 1705, 3470, 3497, 3662
HpyCH4IV ACGT 5 cut(s) 243, 443, 1141, 1636, 3194
HpyF10VI GCNNNNNNNGC 9 cut(s) 146, 600, 629, 1499, 2029, 2150, 2159, 2830, 3756
HpySE526I ACGT 5 cut(s) 243, 443, 1141, 1636, 3194
Hsp92I GRCGYC 2 cut(s) 59, 99
HspAI GCGC 2 cut(s) 59, 277
KasI GGCGCC 1 cut(s) 58
KpnI GGTACC 1 cut(s) 2897
LguI GCTCTTC 1 cut(s) 2928
LmnI GCTCC 4 cut(s) 899, 959, 2701, 3696
LweI GCATC 9 cut(s) 151, 196, 1719, 2131, 2140, 2917, 2936, 3675, 3824
MaeI CTAG 5 cut(s) 447, 485, 1940, 2003, 2201
MaeII ACGT 5 cut(s) 243, 443, 1141, 1636, 3194
MaeIII GTNAC 9 cut(s) 125, 715, 739, 922, 1208, 1480, 3273, 3444, 3662
MbiI CCGCTC 1 cut(s) 388
MfeI CAATTG 5 cut(s) 1319, 1788, 2432, 2828, 3717
MflI RGATCY 3 cut(s) 69, 399, 2084
MhlI GDGCHC 6 cut(s) 437, 904, 2451, 3165, 3214, 3232
Mly113I GGCGCC 1 cut(s) 59
MlyI GAGTC 3 cut(s) 992, 3343, 3786
MmeI TCCRAC 7 cut(s) 484, 877, 1278, 2106, 2190, 2541, 2923
Mph1103I ATGCAT 2 cut(s) 1030, 1473
MroXI GAANNNNTTC 3 cut(s) 662, 2367, 2782
MslI CAYNNNNRTG 1 cut(s) 561
MspA1I CMGCKG 1 cut(s) 3574
MspI CCGG 4 cut(s) 438, 1220, 3278, 3449
MspR9I CCNGG 3 cut(s) 2606, 3226, 3900
MunI CAATTG 5 cut(s) 1319, 1788, 2432, 2828, 3717
Mva1269I GAATGC 1 cut(s) 632
MvaI CCWGG 3 cut(s) 2606, 3226, 3900
MvnI CGCG 2 cut(s) 66, 1626
MwoI GCNNNNNNNGC 9 cut(s) 146, 600, 629, 1499, 2029, 2150, 2159, 2830, 3756
NarI GGCGCC 1 cut(s) 59
NlaIV GGNNCC 7 cut(s) 60, 436, 961, 2086, 2448, 2636, 2895
NmeAIII GCCGAG 1 cut(s) 696
NmuCI GTSAC 5 cut(s) 125, 715, 739, 922, 1208
NruI TCGCGA 2 cut(s) 66, 1626
NsiI ATGCAT 2 cut(s) 1030, 1473
NspI RCATGY 3 cut(s) 541, 1028, 3457
NspV TTCGAA 1 cut(s) 2888
PaeI GCATGC 1 cut(s) 1028
PagI TCATGA 1 cut(s) 654
PasI CCCWGGG 2 cut(s) 2605, 3225
PceI AGGCCT 1 cut(s) 1619
PciI ACATGT 2 cut(s) 537, 3453
PciSI GCTCTTC 1 cut(s) 2928
PcsI WCGNNNNNNNCGW 1 cut(s) 96
PctI GAATGC 1 cut(s) 632
PdmI GAANNNNTTC 3 cut(s) 662, 2367, 2782
Pfl23II CGTACG 1 cut(s) 1700
PflMI CCANNNNNTGG 1 cut(s) 2975
PleI GAGTC 3 cut(s) 991, 3342, 3786
PluTI GGCGCC 1 cut(s) 62
PpsI GAGTC 3 cut(s) 991, 3342, 3786
PscI ACATGT 2 cut(s) 537, 3453
PshAI GACNNNNGTC 1 cut(s) 880
Psp1406I AACGTT 2 cut(s) 1636, 3194
Psp6I CCWGG 3 cut(s) 2604, 3224, 3898
PspFI CCCAGC 1 cut(s) 2800
PspGI CCWGG 3 cut(s) 2604, 3224, 3898
PspLI CGTACG 1 cut(s) 1700
PspN4I GGNNCC 7 cut(s) 60, 436, 961, 2086, 2448, 2636, 2895
PspPI GGNCC 1 cut(s) 3283
PstNI CAGNNNCTG 2 cut(s) 43, 1885
PsuI RGATCY 3 cut(s) 69, 399, 2084
RruI TCGCGA 2 cut(s) 66, 1626
RsaI GTAC 2 cut(s) 1702, 2895
RsaNI GTAC 2 cut(s) 1701, 2894
RseI CAYNNNNRTG 1 cut(s) 561
SalI GTCGAC 1 cut(s) 101
SapI GCTCTTC 1 cut(s) 2928
Sau96I GGNCC 1 cut(s) 3283
SchI GAGTC 3 cut(s) 992, 3343, 3786
ScrFI CCNGG 3 cut(s) 2606, 3226, 3900
SduI GDGCHC 6 cut(s) 437, 904, 2451, 3165, 3214, 3232
SfaNI GCATC 9 cut(s) 151, 196, 1719, 2131, 2140, 2917, 2936, 3675, 3824
SfoI GGCGCC 1 cut(s) 60
SfuI TTCGAA 1 cut(s) 2888
SmiMI CAYNNNNRTG 1 cut(s) 561
SmlI CTYRAG 4 cut(s) 1930, 2119, 2950, 3158
SmoI CTYRAG 4 cut(s) 1930, 2119, 2950, 3158
SphI GCATGC 1 cut(s) 1028
SseBI AGGCCT 1 cut(s) 1619
SspDI GGCGCC 1 cut(s) 58
SspI AATATT 9 cut(s) 270, 531, 1014, 1173, 1287, 2620, 2838, 3174, 3487
SspMI CTAG 5 cut(s) 447, 485, 1940, 2003, 2201
StuI AGGCCT 1 cut(s) 1619
StyD4I CCNGG 3 cut(s) 2604, 3224, 3898
StyI CCWWGG 2 cut(s) 604, 2175
TaaI ACNGT 6 cut(s) 647, 1454, 1705, 3470, 3497, 3662
TaiI ACGT 5 cut(s) 246, 446, 1144, 1639, 3197
TauI GCSGC 2 cut(s) 3395, 3574
TscAI CASTG 8 cut(s) 12, 652, 1105, 1890, 1986, 2721, 3831, 3852
TseFI GTSAC 5 cut(s) 125, 715, 739, 922, 1208
Tsp45I GTSAC 5 cut(s) 125, 715, 739, 922, 1208
TspGWI ACGGA 2 cut(s) 424, 2170
TspRI CASTG 8 cut(s) 12, 652, 1105, 1890, 1986, 2721, 3831, 3852
Van91I CCANNNNNTGG 1 cut(s) 2975
XapI RAATTY 9 cut(s) 254, 1060, 1192, 1304, 2306, 2599, 2648, 2677, 3508
XceI RCATGY 3 cut(s) 541, 1028, 3457
XcmI CCANNNNNNNNNTGG 2 cut(s) 592, 1378
XmiI GTMKAC 2 cut(s) 102, 1684
XmnI GAANNNNTTC 3 cut(s) 662, 2367, 2782
XspI CTAG 5 cut(s) 447, 485, 1940, 2003, 2201
Zsp2I ATGCAT 2 cut(s) 1030, 1473
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.